Pregenerated sensors for NEU1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007038Ensembl transcript IDs: ENSMUST00000007253.6
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCGAGTGCGGGGTTACAGGTGCCCAACATGCTTAGCGTCCATCTaGGCTCTTTCCACGTGGAGAAGGGCTTTGCTCTCCCACACCTGC | + |
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Preference number: 1 (lower is better) Translates to: QRVRGYRCPTCLASI*ALSTWRRALLSHTC Trigger: GCAGGTGTGGGAGAGCAAAGCCCTTCTCCACGTGGAAAGAGCCCAGATGGACGCTAAGCATGTTGGGCACCTGTAACCCCGCACTCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR CCA 90 bp | TACAGGTGCCCAACATGCTTAGCGTCCATCTGGGCTCTTTCCACGTaGAGAAGGGCTTTGCTCTCCCACACCTGCAGCAACTGCTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: YRCPTCLASIWALST*RRALLSHTCSNCLL Trigger: GAGCAAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGCCCTTCTCCACGTGGAAAGAGCCCAGATGGACGCTAAGCATGTTGGGCACCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR CCA 90 bp | ATCGGCTCCTCTTCCAGCTGCCTTCCTGTCTCTCCAGGAGGCAATTaGGAAGGCGTGAGCAGACAGAACCACAGACTCCACAAACGCTTT | + |
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Preference number: 1 (lower is better) Translates to: IGSSSSCLPVSPGGN*EGVSRQNHRLHKRF Trigger: AAAGCGTTTGTGGAGTCTGTGGTTCTGTCTGCTCACGCCTTCCCAATTGCCTCCTGGAGAGACAGGAAGGCAGCTGGAAGAGGAGCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR GCA 90 bp | GAGACAGCAAGATGGCTCAGCTGGCAAAGGCACCTGCCCCCAACTCTGACACCTGACGGAGGGACTTCCTaGCCCGAGAGGAAGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: ETARWLSWQRHLPPTLTPDGGTS*PERKLG Trigger: ACCCAGCTTCCTCTCGGGGCAGGAAGTCCCTCCGTC...AGGTGTCAGAGTTGGGGGCAGGTGCCTTTGCCAGCTGAGCCATCTTGCTGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR GCA 90 bp | GAGACAGCAAGATGGCTCAGCTGGCAAAGGCACCTGCCCCCAACTCTGACACCTTACAGGTGCCCAACATaGTTAGCGTCCATCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: ETARWLSWQRHLPPTLTPYRCPT*LASIWA Trigger: AGCCCAGATGGACGCTAAGCATGTTGGGCACCTGTA...AGGTGTCAGAGTTGGGGGCAGGTGCCTTTGCCAGCTGAGCCATCTTGCTGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCACACCTGCAGCAACTGCTTGCTCCTTTCTCACAGACTGTCCTTCCCATGTCCTGGAAGAGAATaGACAGGGGCCATCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LSHTCSNCLLLSHRLSFPCPGRE*TGAIPS Trigger: GCTGGGGATGGCCCCTGTCCATTCTCTTCCAGGACA...TGGGAAGGACAGTCTGTGAGAAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCACACCTGCAGCAACTGCTTGCTCCTTTCTCACAGACTGTCCTTCCCATCTCCAGGAGGCAATTaGGAAGGCGTGAGCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: LSHTCSNCLLLSHRLSFPSPGGN*EGVSRQ Trigger: CTGTCTGCTCACGCCTTCCCAATTGCCTCCTGGAGA...TGGGAAGGACAGTCTGTGAGAAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR CAA 90 bp | ACATGCTTAGCGTCCATCTGGGCTCTTTCCACGTGGAGAAGGGCTTaGCTCTCCCACACCTGCAGCAACTGCTTGCTCCTTTCTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: TCLASIWALSTWRRA*LSHTCSNCLLLSHR Trigger: TCTGTGAGAAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGCCCTTCTCCACGTGGAAAGAGCCCAGATGGACGCTAAGCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR GCA 90 bp | CACCTGCCCCCAACTCTGACACCTGAGGTCATTCCACAGGACTCACAGCGTGAATCTGAAAGGACACTCTaGCCTGGGGACTTTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: HLPPTLTPEVIPQDSQRESERTL*PGDFQQ Trigger: TTGCTGAAAGTCCCCAGGGCAGAGTGTCCTTTCAGA...TTCACGCTGTGAGTCCTGTGGAATGACCTCAGGTGTCAGAGTTGGGGGCAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGCAAGATGGCTCAGCTGGCAAAGGCACCTGCCCCCAACTCTGACACCTACTGTCCTTCCCATCTaGTTTTACACATCTGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: ETARWLSWQRHLPPTLTPTVLPI*FYTSVP Trigger: GGGAACAGATGTGTAAAACCAGATGGGAAGGACAGT...AGGTGTCAGAGTTGGGGGCAGGTGCCTTTGCCAGCTGAGCCATCTTGCTGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTTTGCTCTCCCACACCTGCAGCAACTGCTTGCTCCTTTCTCACAGACTGCCTTCTCAGTTCCCTaGGTTCGTATCTGTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: KGFALPHLQQLLAPFSQTAFSVP*VRICSS Trigger: AGATGAACAGATACGAACTCAGGGAACTGAGAAGGC...AGTCTGTGAGAAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR GCA 90 bp | GAGACAGCAAGATGGCTCAGCTGGCAAAGGCACCTGCCCCCAACTCTGACACCTCTGTTGATGAGAAGTTaGAAAAGGTCAGAGTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: ETARWLSWQRHLPPTLTPLLMRS*KRSEFR Trigger: TCTGAACTCTGACCTTTTGCAACTTCTCATCAACAG...AGGTGTCAGAGTTGGGGGCAGGTGCCTTTGCCAGCTGAGCCATCTTGCTGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR GCA 90 bp | CACCTGCCCCCAACTCTGACACCTGAGGTCATTCCACAGGACTCACAGCGTGAAATAAATAATCAAAGGTaGACACGTAGGTGTGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: HLPPTLTPEVIPQDSQREINNQR*TRRCAY Trigger: ATAAGCACACCTACGTGTGCACCTTTGATTATTTAT...TTCACGCTGTGAGTCCTGTGGAATGACCTCAGGTGTCAGAGTTGGGGGCAGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR TCA 90 bp | TCTCACAGACTGTCCTTCCCATCTGGTTTTACACATCTGTTCCCTATTTCCTATTGCTTATCCTTGCTCTaGAAGGACACTCTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SHRLSFPSGFTHLFPISYCLSLL*KDTLPW Trigger: CCAGGGCAGAGTGTCCTTTCAGAGCAAGGATAAGCA...ATAGGAAATAGGGAACAGATGTGTAAAACCAGATGGGAAGGACAGTCTGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR TCA 72 bp | GATGGCTCAGCTGGCAAAGGCACCTGCCCCCAACTCTaGCACCTGAGGTCATTCCACAGGACTCACAGCGTG | + |
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Preference number: 3 (lower is better) Translates to: DGSAGKGTCPQL*HLRSFHRTHSV Trigger: CACGCTGTGAGTCCTGTGGAATGACCTCAGGTGTCAGAGTTGGGGGCAGGTGCCTTTGCCAGCTGAGCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR CAA 90 bp | GGCTCTTTCCACGTGGAGAAGGGCTTTGCTCTCCCACACCTGCAGCAACTGCTTCTCTCCAGGAGGCAATaGGGAAGGCGTGAGCAGACA | + |
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Preference number: 3 (lower is better) Translates to: GSFHVEKGFALPHLQQLLLSRRQ*GRREQT Trigger: TGTCTGCTCACGCCTTCCCAATTGCCTCCTGGAGAG...AAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGCCCTTCTCCACGTGGAAAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR CCA 72 bp | CGGGGTTACAGGTGCCCAACATGCTTAGCGTCCATCTaGGCTCTTTCCACGTGGAGAAGGGCTTTGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: RGYRCPTCLASI*ALSTWRRALLS Trigger: GGAGAGCAAAGCCCTTCTCCACGTGGAAAGAGCCCAGATGGACGCTAAGCATGTTGGGCACCTGTAACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR TCA 72 bp | CTTTGTACCCTAGGACACCGGGCCTTCTCAGTTCCCTaGGTTCGTATCTGTTCATCTCTCCAGGGGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: LCTLGHRAFSVP*VRICSSLQGEP Trigger: GGGCTCCCCCTGGAGAGATGAACAGATACGAACTCAGGGAACTGAGAAGGCCCGGTGTCCTAGGGTACAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR GCA 72 bp | CTGCTTCCCAGTAAGTACATCGGCTCCTCTTCCAGCTaGCTTCCTGTCTCTCCAGGAGGCAATTGGGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: LLPSKYIGSSSS*LPVSPGGNWEG Trigger: GCCTTCCCAATTGCCTCCTGGAGAGACAGGAAGGCAGCTGGAAGAGGAGCCGATGTACTTACTGGGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR GCA 72 bp | CGTCCATCTGGGCTCTTTCCACGTGGAGAAGGGCTTTaGTCTCCCACACCTGCAGCAACTGCTTGCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: RPSGLFPRGEGL*SPTPAATACSF Trigger: AAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGCCCTTCTCCACGTGGAAAGAGCCCAGATGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR CCA 72 bp | CCAACATGCTTAGCGTCCATCTGGGCTCTTTCCACGTaGAGAAGGGCTTTGCTCTCCCACACCTGCAGCAAC | + |
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Preference number: 3 (lower is better) Translates to: PTCLASIWALST*RRALLSHTCSN Trigger: GTTGCTGCAGGTGTGGGAGAGCAAAGCCCTTCTCCACGTGGAAAGAGCCCAGATGGACGCTAAGCATGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR CAA 90 bp | GGCACAGCTCCGTTGTCCTGGAAGAGAATGGACAGGGGCCATCCCCAGCATACTCCTGTTGATGAGAAGTaGCAAAAGGTCAGAGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: GTAPLSWKRMDRGHPQHTPVDEK*QKVRVQ Trigger: CTGAACTCTGACCTTTTGCAACTTCTCATCAACAGG...AGTATGCTGGGGATGGCCCCTGTCCATTCTCTTCCAGGACAACGGAGCTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR GCA 72 bp | CAAACAGCAGCAGCCAGGATGGAATCTAGGGGTTTCTaGTTCCCAGTAAGTACATCGGCTCCTCTTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: QTAAARMESRGF*FPVSTSAPLPA Trigger: AGCTGGAAGAGGAGCCGATGTACTTACTGGGAAGCAGAAACCCCTAGATTCCATCCTGGCTGCTGCTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR-3UTR CAA 90 bp | GCTTTGCTCTCCCACACCTGCAGCAACTGCTTGCTCCTTTCTCACAGACTGTCCGAAGAGACTTCCCTGTaGATGAGAAGTTGCAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: ALLSHTCSNCLLLSHRLSEETSL*MRSCKR Trigger: CCTTTTGCAACTTCTCATCAACAGGGAAGTCTCTTC...GGACAGTCTGTGAGAAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR GCA 72 bp | AAGTTACAAATATTTCGATTCATAAATAATCAAAGGTaGACACGTAGGTGTGCTTATCCTTGCTCTGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: KLQIFRFINNQR*TRRCAYPCSER Trigger: CCTTTCAGAGCAAGGATAAGCACACCTACGTGTGCACCTTTGATTATTTATGAATCGAAATATTTGTAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CCA 90 bp | CCCTCTGCAGATGGTCCAGAGAGCTGTGAAGTCAGCGACCAGGACTTGGTGTCCGGGACGAGTAGCCGCTaGGTCCCGGCCACACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PSADGPESCEVSDQDLVSGTSSR*VPATPG Trigger: TCCAGGTGTGGCCGGGACCCAGCGGCTACTCGTCCC...GGACACCAAGTCCTGGTCGCTGACTTCACAGCTCTCTGGACCATCTGCAGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCCCATCCTGTCCCAGAAAGGCACAGCTCCGTTGTCCTGGAAGAGAATCTCACCCACAGCAGCTaGTCCATGGTCACCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: PLPHPVPERHSSVVLEENLTHSS*SMVTSG Trigger: GCCGCTGGTGACCATGGAGCAGCTGCTGTGGGTGAG...ATTCTCTTCCAGGACAACGGAGCTGTGCCTTTCTGGGACAGGATGGGGGAGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CCA 90 bp | AGATGGCTCAGCTGGCAAAGGCACCTGCCCCCAACTCTGACACCTGAGGTCATTGGTCCCGGCCACACCTaGACCCTCTCCTTCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RWLSWQRHLPPTLTPEVIGPGHT*TLSFCQ Trigger: CTGGCAGAAGGAGAGGGTCCAGGTGTGGCCGGGACC...AATGACCTCAGGTGTCAGAGTTGGGGGCAGGTGCCTTTGCCAGCTGAGCCATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR TCA 90 bp | CAGCTCCGTTGTCCTGGAAGAGAATGGACAGGGGCCATCCCCAGCATACTGGAAACCTCCTCATGGCGATaGACTTGGCCCCCTCATCGG | + |
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Preference number: 4 (lower is better) Translates to: QLRCPGREWTGAIPSILETSSWR*TWPPHR Trigger: CCGATGAGGGGGCCAAGTTCATCGCCATGAGGAGGT...TTCCAGTATGCTGGGGATGGCCCCTGTCCATTCTCTTCCAGGACAACGGAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | AAGGGCTTTGCTCTCCCACACCTGCAGCAACTGCTTGCTCCTTTCTCACAGACTGAGCAGGAAGATCGCTaGGAGCCCCTGACCCCGACG | + |
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Preference number: 4 (lower is better) Translates to: KGFALPHLQQLLAPFSQTEQEDR*EPLTPT Trigger: CGTCGGGGTCAGGGGCTCGCAGCGATCTTCCTGCTC...AGTCTGTGAGAAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | AGCTGCCTTCCTGTCTCTCCAGGAGGCAATTGGGAAGGCGTGAGCAGACAGAACCCCGCTGTTTCTGAATaGCTGAGCCAGGTCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SCLPVSPGGNWEGVSRQNPAVSE*LSQVQG Trigger: CCCCTGGACCTGGCTCAGGCATTCAGAAACAGCGGG...GTTCTGTCTGCTCACGCCTTCCCAATTGCCTCCTGGAGAGACAGGAAGGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | CTCTCCCACACCTGCAGCAACTGCTTGCTCCTTTCTCACAGACTGTCCTTCCCATGCCGCTCACTCCAGTaGCGTAGTGCCAGGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSHTCSNCLLLSHRLSFPCRSLQ*RSARRH Trigger: GTGCCTCCTGGCACTACGGCACTGGAGTGAGCGGCA...TGGGAAGGACAGTCTGTGAGAAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CCA 90 bp | AGCTGCCTTCCTGTCTCTCCAGGAGGCAATTGGGAAGGCGTGAGCAGACAGAACAGAGAGATTCCGGGGTaGGCTCCAGGAAATGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: SCLPVSPGGNWEGVSRQNREIPG*APGNAV Trigger: GACGGCATTTCCTGGAGCCCACCCCGGAATCTCTCT...GTTCTGTCTGCTCACGCCTTCCCAATTGCCTCCTGGAGAGACAGGAAGGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CCA 90 bp | CAGCTCCGTTGTCCTGGAAGAGAATGGACAGGGGCCATCCCCAGCATACTGGAATGCCAGGAGGCACCGTaGTCATCACTGAGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: QLRCPGREWTGAIPSILECQEAP*SSLRRQ Trigger: CTGTCTCCTCAGTGATGACCACGGTGCCTCCTGGCA...TTCCAGTATGCTGGGGATGGCCCCTGTCCATTCTCTTCCAGGACAACGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CCA 90 bp | CCTCTGCAGATGGTCCAGAGAGCTGTGAAGTCAGCGACCAGGACTTGGTGTCCTCAATGCCGGAGCTGGTaGCTAGTGCTCCTGCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: PLQMVQRAVKSATRTWCPQCRSW*LVLLQL Trigger: TAGCTGCAGGAGCACTAGCCACCAGCTCCGGCATTG...AGGACACCAAGTCCTGGTCGCTGACTTCACAGCTCTCTGGACCATCTGCAGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| 3UTR CAA 72 bp | GCGTCCATCTGGGCTCTTTCCACGTGGAGAAGGGCTTaGCTCTCCCACACCTGCAGCAACTGCTTGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: ASIWALSTWRRA*LSHTCSNCLLL Trigger: AAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGCCCTTCTCCACGTGGAAAGAGCCCAGATGGACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR TCA 90 bp | GAAGAGCTGTGTTTCAGGCACCCTCTGCAGATGGTCCAGAGAGCTGTGAAGTCAGGCTCCCGCTGTTTCTaGATGCCTGAGCCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: EELCFRHPLQMVQRAVKSGSRCF*MPEPGP Trigger: TGGACCTGGCTCAGGCATTCAGAAACAGCGGGAGCC...TGACTTCACAGCTCTCTGGACCATCTGCAGAGGGTGCCTGAAACACAGCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR TCA 90 bp | GGCACAGCTCCGTTGTCCTGGAAGAGAATGGACAGGGGCCATCCCCAGCATACTAGGATGTACCATTGCTaGAACTCCAGCGCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GTAPLSWKRMDRGHPQHTRMYHC*NSSAGS Trigger: TGACCCTGCGCTGGAGTTTCAGCAATGGTACATCCT...AGTATGCTGGGGATGGCCCCTGTCCATTCTCTTCCAGGACAACGGAGCTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | AAGGGCTTTGCTCTCCCACACCTGCAGCAACTGCTTGCTCCTTTCTCACAGACTTCTACAGAGCCGATCTaGTTCCCGCTCACCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: KGFALPHLQQLLAPFSQTSTEPI*FPLTHS Trigger: GCTGTGGGTGAGCGGGAAGCAGATCGGCTCTGTAGA...AGTCTGTGAGAAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | CCTCTGCAGATGGTCCAGAGAGCTGTGAAGTCAGCGACCAGGACTTGGTGTCCTTGGAGAAGAAGACAATaGCGGAGCTGGTGGCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: PLQMVQRAVKSATRTWCPWRRRQ*RSWWLV Trigger: CACTAGCCACCAGCTCCGGCATTGTCTTCTTCTCCA...AGGACACCAAGTCCTGGTCGCTGACTTCACAGCTCTCTGGACCATCTGCAGAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CCA 90 bp | AGCTGCCTTCCTGTCTCTCCAGGAGGCAATTGGGAAGGCGTGAGCAGACAGAACACTCGGAACTCAGGGTaGGCTGGATTGGAGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SCLPVSPGGNWEGVSRQNTRNSG*AGLEKK Trigger: CTTCTTCTCCAATCCAGCCCACCCTGAGTTCCGAGT...GTTCTGTCTGCTCACGCCTTCCCAATTGCCTCCTGGAGAGACAGGAAGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CCA 90 bp | CCCTCTGCAGATGGTCCAGAGAGCTGTGAAGTCAGCGACCAGGACTTGGTGTCCGAACTCAGGGTGGGCTaGATTGGAGAAGAAGACAAT | + |
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Preference number: 4 (lower is better) Translates to: PSADGPESCEVSDQDLVSELRVG*IGEEDN Trigger: ATTGTCTTCTTCTCCAATCCAGCCCACCCTGAGTTC...GGACACCAAGTCCTGGTCGCTGACTTCACAGCTCTCTGGACCATCTGCAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CCA 90 bp | GCCAGGATGGAATCTAGGGGTTTCTGCTTCCCAGTAAGTACATCGGCTCCTCTTCAGGGTGGGCTGGATTaGAGAAGAAGACAATGCCGG | + |
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Preference number: 4 (lower is better) Translates to: ARMESRGFCFPVSTSAPLQGGLD*RRRQCR Trigger: CCGGCATTGTCTTCTTCTCCAATCCAGCCCACCCTG...AAGAGGAGCCGATGTACTTACTGGGAAGCAGAAACCCCTAGATTCCATCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | GAAGAGCTGTGTTTCAGGCACCCTCTGCAGATGGTCCAGAGAGCTGTGAAGTCAGCTTCTTTCCATCCGTaGTGTTTTCCAGGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: EELCFRHPLQMVQRAVKSASFHP*CFPGLS Trigger: TGACAGCCCTGGAAAACAGCACGGATGGAAAGAAGC...TGACTTCACAGCTCTCTGGACCATCTGCAGAGGGTGCCTGAAACACAGCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | AAGGGCTTTGCTCTCCCACACCTGCAGCAACTGCTTGCTCCTTTCTCACAGACTGGGCAAACATCTCTGTaGCAATATCCACAGAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: KGFALPHLQQLLAPFSQTGQTSL*QYPQRD Trigger: ATCTCTCTGTGGATATTGGCACAGAGATGTTTGCCC...AGTCTGTGAGAAAGGAGCAAGCAGTTGCTGCAGGTGTGGGAGAGCAAAGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | TCTCACAGACTGTCCTTCCCATCTGGTTTTACACATCTGTTCCCTATTTCCTATGTGGGCTCCAGGAAATaGCGTCGTCCTTACTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SHRLSFPSGFTHLFPISYVGSRK*RRPYSK Trigger: TTTGGAGTAAGGACGACGGCATTTCCTGGAGCCCAC...ATAGGAAATAGGGAACAGATGTGTAAAACCAGATGGGAAGGACAGTCTGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR GCA 90 bp | TCTCACAGACTGTCCTTCCCATCTGGTTTTACACATCTGTTCCCTATTTCCTATTGGACCCTCTCCTTCTaGCAGGATGTACCATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SHRLSFPSGFTHLFPISYWTLSF*QDVPLL Trigger: CAGCAATGGTACATCCTGGCAGAAGGAGAGGGTCCA...ATAGGAAATAGGGAACAGATGTGTAAAACCAGATGGGAAGGACAGTCTGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS TCA 90 bp | CCACAGGGTCCACGAGCTCAGGGTCGAAGGTCACATCCCGGGGCCTaGGGGTGTCACAGGCGTCATAGCTGCGGAGGACGATCCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PQGPRAQGRRSHPGA*GCHRRHSCGGRSCS Trigger: GCTGCAGGATCGTCCTCCGCAGCTATGACGCCTGTGACACCCTCAGGCCCCGGGATGTGACCTTCGACCCTGAGCTCGTGGACCCTGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS GCA 90 bp | CTGCTCCATGGTCACCAGCGGCTGCACCAGGCTGAAGTCATCCTCTaGCCTGGCCTCGGATTCCGCCGCGGACACCAGGAGCAGGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: LLHGHQRLHQAEVIL*PGLGFRRGHQEQED Trigger: ATCTTCCTGCTCCTGGTGTCCGCGGCGGAATCCGAGGCCAGGGCAGAGGATGACTTCAGCCTGGTGCAGCCGCTGGTGACCATGGAGCAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS TCA 90 bp | CGCTCACTCCAGTGCCGTAGTGCCAGGAGGCACCGTGGTCATCACTaGGGAGACAGAAGACCCCATCTCGCTCCAGCGTCCCGTGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: RSLQCRSARRHRGHH*GDRRPHLAPASRVH Trigger: GTGGACACGGGACGCTGGAGCGAGATGGGGTCTTCTGTCTCCTCAGTGATGACCACGGTGCCTCCTGGCACTACGGCACTGGAGTGAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS TCA 90 bp | GACAGAAGACCCCATCTCGCTCCAGCGTCCCGTGTCCACACACAATaGGCCGGCCCTTCCCAGGCTCCCGCTGTTTCTGAATGCCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: DRRPHLAPASRVHTQ*AGPSQAPAVSECLS Trigger: GCTCAGGCATTCAGAAACAGCGGGAGCCTGGGAAGGGCCGGCTCATTGTGTGTGGACACGGGACGCTGGAGCGAGATGGGGTCTTCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CCA 90 bp | TTCCATCCGTGCTGTTTTCCAGGGCTGTCAGGGACGAGTAGCCGCTaGGTCCCGGCCACACCTGGACCCTCTCCTTCTGCCAGGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: FHPCCFPGLSGTSSR*VPATPGPSPSARMY Trigger: GTACATCCTGGCAGAAGGAGAGGGTCCAGGTGTGGCCGGGACCCAGCGGCTACTCGTCCCTGACAGCCCTGGAAAACAGCACGGATGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS TCA 90 bp | CCGGCCACACCTGGACCCTCTCCTTCTGCCAGGATGTACCATTGCTaGAACTCCAGCGCAGGGTCAGGTTCACTCGGAACTCAGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: PATPGPSPSARMYHC*NSSAGSGSLGTQGG Trigger: CCCACCCTGAGTTCCGAGTGAACCTGACCCTGCGCTGGAGTTTCAGCAATGGTACATCCTGGCAGAAGGAGAGGGTCCAGGTGTGGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CCA 90 bp | TCCCCATCGTCTACGATGAAGGCTGTAGAGGACCACGTGCTACCCTaGTCCGTGGACCTCCTCATGGCGATGAACTTGGCCCCCTCATCG | + |
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Preference number: 5 (lower is better) Translates to: SPSSTMKAVEDHVLP*SVDLLMAMNLAPSS Trigger: CGATGAGGGGGCCAAGTTCATCGCCATGAGGAGGTCCACGGACCAGGGTAGCACGTGGTCCTCTACAGCCTTCATCGTAGACGATGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS GCA 90 bp | AAAGTGTCTACAGAGCCGATCTGCTTCCCGCTCACCCACAGCAGCTaGTCCATGGTCACCAGCGGCTGCACCAGGCTGAAGTCATCCTCT | + |
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Preference number: 5 (lower is better) Translates to: KVSTEPICFPLTHSS*SMVTSGCTRLKSSS Trigger: AGAGGATGACTTCAGCCTGGTGCAGCCGCTGGTGACCATGGAGCAGCTGCTGTGGGTGAGCGGGAAGCAGATCGGCTCTGTAGACACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CAA 90 bp | CACCTGCCCCCAACTCTGACACCTGAGGTCATTCCACAGGACTCACAGCGTGAACTCATGGCGATGAACTaGGCCCCCTCATCGGATGCA | + |
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Preference number: 5 (lower is better) Translates to: HLPPTLTPEVIPQDSQRELMAMN*APSSDA Trigger: TGCATCCGATGAGGGGGCCAAGTTCATCGCCATGAG...TTCACGCTGTGAGTCCTGTGGAATGACCTCAGGTGTCAGAGTTGGGGGCAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS-3UTR CAA 90 bp | CACCTGCCCCCAACTCTGACACCTGAGGTCATTCCACAGGACTCACAGCGTGAATCAGGGTGGGCTGGATaGGAGAAGAAGACAATGCCG | + |
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Preference number: 5 (lower is better) Translates to: HLPPTLTPEVIPQDSQRESGWAG*EKKTMP Trigger: CGGCATTGTCTTCTTCTCCAATCCAGCCCACCCTGA...TTCACGCTGTGAGTCCTGTGGAATGACCTCAGGTGTCAGAGTTGGGGGCAGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CCA 90 bp | AGGGGCAAACATCTCTGTGCCAATATCCACAGAGAGATTCCGGGGTaGGCTCCAGGAAATGCCGTCGTCCTTACTCCAAACCAACATGGT | + |
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Preference number: 5 (lower is better) Translates to: RGKHLCANIHREIPG*APGNAVVLTPNQHG Trigger: ACCATGTTGGTTTGGAGTAAGGACGACGGCATTTCCTGGAGCCCACCCCGGAATCTCTCTGTGGATATTGGCACAGAGATGTTTGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS TCA 72 bp | CCACGAGCTCAGGGTCGAAGGTCACATCCCGGGGCCTaGGGGTGTCACAGGCGTCATAGCTGCGGAGGACGA | + |
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Preference number: 6 (lower is better) Translates to: PRAQGRRSHPGA*GCHRRHSCGGR Trigger: TCGTCCTCCGCAGCTATGACGCCTGTGACACCCTCAGGCCCCGGGATGTGACCTTCGACCCTGAGCTCGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CCA 72 bp | TGCTGTTTTCCAGGGCTGTCAGGGACGAGTAGCCGCTaGGTCCCGGCCACACCTGGACCCTCTCCTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: CCFPGLSGTSSR*VPATPGPSPSA Trigger: GGCAGAAGGAGAGGGTCCAGGTGTGGCCGGGACCCAGCGGCTACTCGTCCCTGACAGCCCTGGAAAACAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS TCA 72 bp | CCCCATCTCGCTCCAGCGTCCCGTGTCCACACACAATaGGCCGGCCCTTCCCAGGCTCCCGCTGTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PHLAPASRVHTQ*AGPSQAPAVSE Trigger: TTCAGAAACAGCGGGAGCCTGGGAAGGGCCGGCTCATTGTGTGTGGACACGGGACGCTGGAGCGAGATGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS GCA 72 bp | CCGCTGGGTCCCGGCCACACCTGGACCCTCTCCTTCTaGCAGGATGTACCATTGCTGAAACTCCAGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PLGPGHTWTLSF*QDVPLLKLQRR Trigger: CCTGCGCTGGAGTTTCAGCAATGGTACATCCTGGCAGAAGGAGAGGGTCCAGGTGTGGCCGGGACCCAGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CAA 90 bp | GGTCCCGGCCACACCTGGACCCTCTCCTTCTGCCAGGATGTACCATaGCTGAAACTCCAGCGCAGGGTCAGGTTCACTCGGAACTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GPGHTWTLSFCQDVP*LKLQRRVRFTRNSG Trigger: CCCTGAGTTCCGAGTGAACCTGACCCTGCGCTGGAGTTTCAGCAATGGTACATCCTGGCAGAAGGAGAGGGTCCAGGTGTGGCCGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS GCA 72 bp | GAACGAACAGCTGCGGGGGCTGCTTCTTTCCATCCGTaGTGTTTTCCAGGGCTGTCAGGGACGAGTAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: ERTAAGAASFHP*CFPGLSGTSSR Trigger: GCGGCTACTCGTCCCTGACAGCCCTGGAAAACAGCACGGATGGAAAGAAGCAGCCCCCGCAGCTGTTCGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CCA 72 bp | GCGCAGGGTCAGGTTCACTCGGAACTCAGGGTGGGCTaGATTGGAGAAGAAGACAATGCCGGAGCTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: AQGQVHSELRVG*IGEEDNAGAGG Trigger: GCCACCAGCTCCGGCATTGTCTTCTTCTCCAATCCAGCCCACCCTGAGTTCCGAGTGAACCTGACCCTGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS GCA 72 bp | GGGTGTCACAGGCGTCATAGCTGCGGAGGACGATCCTaGAGCGGCAATGGTAGTTATTCTGGTTCCGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: GCHRRHSCGGRS*SGNGSYSGSGR Trigger: ACGCCCGGAACCAGAATAACTACCATTGCCGCTGCAGGATCGTCCTCCGCAGCTATGACGCCTGTGACACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CCA 72 bp | GGGCTGGATTGGAGAAGAAGACAATGCCGGAGCTGGTaGCTAGTGCTCCTGCAGCTACCACAGGGTCCACGA | + |
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Preference number: 6 (lower is better) Translates to: GLDWRRRQCRSW*LVLLQLPQGPR Trigger: TCGTGGACCCTGTGGTAGCTGCAGGAGCACTAGCCACCAGCTCCGGCATTGTCTTCTTCTCCAATCCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CCA 72 bp | GGTGGGCTGGATTGGAGAAGAAGACAATGCCGGAGCTaGTGGCTAGTGCTCCTGCAGCTACCACAGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GGLDWRRRQCRS*WLVLLQLPQGP Trigger: TGGACCCTGTGGTAGCTGCAGGAGCACTAGCCACCAGCTCCGGCATTGTCTTCTTCTCCAATCCAGCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CCA 72 bp | TCTACGATGAAGGCTGTAGAGGACCACGTGCTACCCTaGTCCGTGGACCTCCTCATGGCGATGAACTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: STMKAVEDHVLP*SVDLLMAMNLA Trigger: GGCCAAGTTCATCGCCATGAGGAGGTCCACGGACCAGGGTAGCACGTGGTCCTCTACAGCCTTCATCGTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CAA 72 bp | CACACCTGGACCCTCTCCTTCTGCCAGGATGTACCATaGCTGAAACTCCAGCGCAGGGTCAGGTTCACTCGG | + |
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Preference number: 6 (lower is better) Translates to: HTWTLSFCQDVP*LKLQRRVRFTR Trigger: CCGAGTGAACCTGACCCTGCGCTGGAGTTTCAGCAATGGTACATCCTGGCAGAAGGAGAGGGTCCAGGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS TCA 72 bp | CCTGGACCCTCTCCTTCTGCCAGGATGTACCATTGCTaGAACTCCAGCGCAGGGTCAGGTTCACTCGGAACT | + |
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Preference number: 6 (lower is better) Translates to: PGPSPSARMYHC*NSSAGSGSLGT Trigger: AGTTCCGAGTGAACCTGACCCTGCGCTGGAGTTTCAGCAATGGTACATCCTGGCAGAAGGAGAGGGTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS GCA 72 bp | AGGCCTTTCTCGTACAGAACGAACAGCTGCGGGGGCTaGTTCTTTCCATCCGTGCTGTTTTCCAGGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RPFSYRTNSCGG*FFPSVLFSRAV Trigger: GACAGCCCTGGAAAACAGCACGGATGGAAAGAAGCAGCCCCCGCAGCTGTTCGTTCTGTACGAGAAAGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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| CDS CCA 72 bp | CATCTCTGTGCCAATATCCACAGAGAGATTCCGGGGTaGGCTCCAGGAAATGCCGTCGTCCTTACTCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: HLCANIHREIPG*APGNAVVLTPN Trigger: GTTTGGAGTAAGGACGACGGCATTTCCTGGAGCCCACCCCGGAATCTCTCTGTGGATATTGGCACAGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007253.6 |
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