Pregenerated sensors for NETO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036902Ensembl transcript IDs: ENSMUST00000109686.4, ENSMUST00000209479.2, ENSMUST00000216286.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTTCACAGCACCGGGCTGCTCTGCCTGACTTAACATGCATGACCTaGTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: CSQHRAALPDLTCMT*SSAAIALVVFYRLR Trigger: TCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCAGGTCATGCATGTTAAGTCAGGCAGAGCAGCCCGGTGCTGTGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR CCA 90 bp | GCTAACACAGTTTCTCTGAGAATTTCTTTAAGCTTCCACCAACCATaGCCATGTCCAAGACAAACCAATACCAAGAGAACAAAGAAATCG | + |
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Preference number: 1 (lower is better) Translates to: ANTVSLRISLSFHQP*PCPRQTNTKRTKKS Trigger: CGATTTCTTTGTTCTCTTGGTATTGGTTTGTCTTGGACATGGCCATGGTTGGTGGAAGCTTAAAGAAATTCTCAGAGAAACTGTGTTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR TCA 90 bp | AAGTGGGCATATGGCAGACATCATTTTGCAACAAAGTGTAATCTCTaGATGTTAATTATTCCTGGAACTACAAGCAGCCTTTTCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: KWAYGRHHFATKCNL*MLIIPGTTSSLFSS Trigger: AGATGAGAAAAGGCTGCTTGTAGTTCCAGGAATAATTAACATTCAGAGATTACACTTTGTTGCAAAATGATGTCTGCCATATGCCCACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACTTTCTTGCACTGGAGATTTTTACTATCCTCTGGCTTTGCATTTTTCACTCCGGGCTGCTCTGCCTaGCTTAACATGCATGACCTG | + |
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Preference number: 2 (lower is better) Translates to: STFLHWRFLLSSGFAFFTPGCSA*LNMHDL Trigger: CAGGTCATGCATGTTAAGTCAGGCAGAGCAGCCCGG...AGTGAAAAATGCAAAGCCAGAGGATAGTAAAAATCTCCAGTGCAAGAAAGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTAAGTTGATGGGGCTGTaGAGACACGCACAGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: WVEKCTVSSRSYVKANTVKLMGL*RHAQCL Trigger: CAGGCACTGTGCGTGTCTGCACAGCCCCATCAACTT...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTCTGCCTGACTTAACATaGATGACCTGCTCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: WVEKCTVSSRSYVKANTVLPDLT*MTCSSA Trigger: AGCTGAGGAGCAGGTCATGCATGTTAAGTCAGGCAG...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACTTTCTTGCACTGGAGATTTTTACTATCCTCTGGCTTTGCATTTTTCACTCCGTCTGCAGGAAACTaGAATGGTAAAACCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: STFLHWRFLLSSGFAFFTPSAGN*NGKTTG Trigger: GCCTGTGGTTTTACCATTTCAGTTTCCTGCAGACGG...AGTGAAAAATGCAAAGCCAGAGGATAGTAAAAATCTCCAGTGCAAGAAAGTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR CAA 90 bp | GAGCTGACAGCTTGTAGTGAACTTGGGATGAACGACAGCAATGTGTaGGTATCATATAGTTTGTACTTAGTACTTTCTTGCACTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: ELTACSELGMNDSNV*VSYSLYLVLSCTGD Trigger: ATCTCCAGTGCAAGAAAGTACTAAGTACAAACTATATGATACCAACACATTGCTGTCGTTCATCCCAAGTTCACTACAAGCTGTCAGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTTTACTGTCACTGAATTaGGACCCAGTGGGGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: WVEKCTVSSRSYVKANTVLLSLN*DPVGKT Trigger: AGTTTTCCCCACTGGGTCTCAATTCAGTGACAGTAA...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR-3UTR GCA 90 bp | AGTACTTTCTTGCACTGGAGATTTTTACTATCCTCTGGCTTTGCATTTTTCACTCTCCTCAGCTGCTATTaGACTGGTGGTGTTTTACAG | + |
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Preference number: 2 (lower is better) Translates to: STFLHWRFLLSSGFAFFTLLSCY*TGGVLQ Trigger: CTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAG...AGTGAAAAATGCAAAGCCAGAGGATAGTAAAAATCTCCAGTGCAAGAAAGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTTTAACATGCATGACCTaGTCCTCAGCTGCTATTGCA | + |
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Preference number: 2 (lower is better) Translates to: WVEKCTVSSRSYVKANTVLTCMT*SSAAIA Trigger: TGCAATAGCAGCTGAGGAGCAGGTCATGCATGTTAA...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR-3UTR GCA 90 bp | GTACATATCACCATGAGCAAGGTCTTTATAATAAATTACAGTACAGTCCCATCACTGCCTGACTTAACATaGATGACCTGCTCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: VHITMSKVFIINYSTVPSLPDLT*MTCSSA Trigger: AGCTGAGGAGCAGGTCATGCATGTTAAGTCAGGCAG...TGATGGGACTGTACTGTAATTTATTATAAAGACCTTGCTCATGGTGATATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR TCA 90 bp | GTACATATCACCATGAGCAAGGTCTTTATAATAAATTACAGTACAGTCCCATCAATAGGGAATAAGATCTaGGAAGCTCTGCATGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: VHITMSKVFIINYSTVPSIGNKI*EALHGA Trigger: GGCTCCATGCAGAGCTTCTCAGATCTTATTCCCTAT...TGATGGGACTGTACTGTAATTTATTATAAAGACCTTGCTCATGGTGATATGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR GCA 90 bp | AGTACTTTCTTGCACTGGAGATTTTTACTATCCTCTGGCTTTGCATTTTTCACTTTAACATGCATGACCTaGTCCTCAGCTGCTATTGCA | + |
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Preference number: 2 (lower is better) Translates to: STFLHWRFLLSSGFAFFTLTCMT*SSAAIA Trigger: TGCAATAGCAGCTGAGGAGCAGGTCATGCATGTTAA...AGTGAAAAATGCAAAGCCAGAGGATAGTAAAAATCTCCAGTGCAAGAAAGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR CAA 90 bp | AGTGAACTTGGGATGAACGACAGCAATGTGTTGGTATCATATAGTTaGTACTTAGTACTTTCTTGCACTGGAGATTTTTACTATCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SELGMNDSNVLVSYS*YLVLSCTGDFYYPL Trigger: CAGAGGATAGTAAAAATCTCCAGTGCAAGAAAGTACTAAGTACAAACTATATGATACCAACACATTGCTGTCGTTCATCCCAAGTTCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGCTATCAATTTAAGTATTTACTATGGTGTTGGAGTGGTGGCTGGTCTAAGCTTTTAAATTTACTGTaGGATCAAGTTGATGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: HSYQFKYLLWCWSGGWSKLLNLL*DQVDGA Trigger: AGCCCCATCAACTTGATCTCACAGTAAATTTAAAAG...CTTAGACCAGCCACCACTCCAACACCATAGTAAATACTTAAATTGATAGCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTCTTTTAAATTTACTGTaGGATCAAGTTGATGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: WVEKCTVSSRSYVKANTVLLNLL*DQVDGA Trigger: AGCCCCATCAACTTGATCTCACAGTAAATTTAAAAG...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGCTATCAATTTAAGTATTTACTATGGTGTTGGAGTGGTGGCTGGTCTAAGACAGAAAACACACTTTaGTCAGAAAGTACATCACAC | + |
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Preference number: 2 (lower is better) Translates to: HSYQFKYLLWCWSGGWSKTENTL*SESTSH Trigger: GTGTGATGTACTTTCTGACCAAAGTGTGTTTTCTGT...CTTAGACCAGCCACCACTCCAACACCATAGTAAATACTTAAATTGATAGCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACTTTCTTGCACTGGAGATTTTTACTATCCTCTGGCTTTGCATTTTTCACTTCTCTTGCTGATGCATaGGATCATGCAAATTTACAT | + |
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Preference number: 2 (lower is better) Translates to: STFLHWRFLLSSGFAFFTSLADA*DHANLH Trigger: ATGTAAATTTGCATGATCTCATGCATCAGCAAGAGA...AGTGAAAAATGCAAAGCCAGAGGATAGTAAAAATCTCCAGTGCAAGAAAGTACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGTTCTCTTACAGTGGTTCAGACTCAAATAATTCTCAAAACTCAAGATACTTTAAGTATTTACTATaGTGTTGGAGTGGTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SLFSYSGSDSNNSQNSRYFKYLL*CWSGGW Trigger: CCAGCCACCACTCCAACACCATAGTAAATACTTAAA...GTATCTTGAGTTTTGAGAATTATTTGAGTCTGAACCACTGTAAGAGAACAAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGTTCTCTTACAGTGGTTCAGACTCAAATAATTCTCAAAACTCAAGATACATAAAAGTGGGCATATaGCAGACATCATTTTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: SLFSYSGSDSNNSQNSRYIKVGI*QTSFCN Trigger: GTTGCAAAATGATGTCTGCCATATGCCCACTTTTAT...GTATCTTGAGTTTTGAGAATTATTTGAGTCTGAACCACTGTAAGAGAACAAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
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| 3UTR GCA 72 bp | TGTTCACAGCACCGGGCTGCTCTGCCTGACTTAACATaGATGACCTGCTCCTCAGCTGCTATTGCACTGGTG | + |
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Preference number: 3 (lower is better) Translates to: CSQHRAALPDLT*MTCSSAAIALV Trigger: CACCAGTGCAATAGCAGCTGAGGAGCAGGTCATGCATGTTAAGTCAGGCAGAGCAGCCCGGTGCTGTGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR GCA 72 bp | CACCGGGCTGCTCTGCCTGACTTAACATGCATGACCTaGTCCTCAGCTGCTATTGCACTGGTGGTGTTTTAC | + |
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Preference number: 3 (lower is better) Translates to: HRAALPDLTCMT*SSAAIALVVFY Trigger: GTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCAGGTCATGCATGTTAAGTCAGGCAGAGCAGCCCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR CCA 72 bp | GCCAAGGAAGGTTACTGGGCTAGGAGGATGGAGCCATaGGGAGCTACTTCACCATCAGGGTTTTGTCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: AKEGYWARRMEP*GATSPSGFCLL Trigger: GAGAAGACAAAACCCTGATGGTGAAGTAGCTCCCCATGGCTCCATCCTCCTAGCCCAGTAACCTTCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR CCA 72 bp | GAGAAGAAGCCAAGGAAGGTTACTGGGCTAGGAGGATaGAGCCATGGGGAGCTACTTCACCATCAGGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: EKKPRKVTGLGG*SHGELLHHQGF Trigger: AAAACCCTGATGGTGAAGTAGCTCCCCATGGCTCCATCCTCCTAGCCCAGTAACCTTCCTTGGCTTCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR CCA 72 bp | GTTTCTCTGAGAATTTCTTTAAGCTTCCACCAACCATaGCCATGTCCAAGACAAACCAATACCAAGAGAACA | + |
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Preference number: 3 (lower is better) Translates to: VSLRISLSFHQP*PCPRQTNTKRT Trigger: TGTTCTCTTGGTATTGGTTTGTCTTGGACATGGCCATGGTTGGTGGAAGCTTAAAGAAATTCTCAGAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR TCA 72 bp | TTGCATGGAACATCTAGGCTGATGTTTGGAATTATGTaGCTTTTAAAAGCTAAGCAGGGAGAGAAGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LHGTSRLMFGIM*LLKAKQGEKKP Trigger: TGGCTTCTTCTCTCCCTGCTTAGCTTTTAAAAGTCACATAATTCCAAACATCAGCCTAGATGTTCCATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR TCA 72 bp | AGGATCAACTTTCTAGTTAGAGAATTTAGAACCAAATaGTCACCCGAGTTTCTCTTGCTGATGCATGAGATC | + |
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Preference number: 3 (lower is better) Translates to: RINFLVREFRTK*SPEFLLLMHEI Trigger: GATCTCATGCATCAGCAAGAGAAACTCGGGTGATCATTTGGTTCTAAATTCTCTAACTAGAAAGTTGATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR GCA 72 bp | CACTGTTTACTAAGAATTCACAGTAATTACATATTCTaGAGGTGCCAAGGAAGTCTGGTAACAAAACTGATG | + |
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Preference number: 3 (lower is better) Translates to: HCLLRIHSNYIF*RCQGSLVTKLM Trigger: CATCAGTTTTGTTACCAGACTTCCTTGGCACCTGCAGAATATGTAATTACTGTGAATTCTTAGTAAACAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
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| 3UTR-3UTR CAA 90 bp | AGCTTGTTCTCTTACAGTGGTTCAGACTCAAATAATTCTCAAAACTCAAGATACAACGACAGCAATGTGTaGGTATCATATAGTTTGTAC | + |
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Preference number: 3 (lower is better) Translates to: SLFSYSGSDSNNSQNSRYNDSNV*VSYSLY Trigger: GTACAAACTATATGATACCAACACATTGCTGTCGTT...GTATCTTGAGTTTTGAGAATTATTTGAGTCTGAACCACTGTAAGAGAACAAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
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| 3UTR CCA 72 bp | CTATGGTATCATAGCTATCAATTTAAGTATTTACTATaGTGTTGGAGTGGTGGCTGGTCTAAGTCACATAAT | + |
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Preference number: 3 (lower is better) Translates to: LWYHSYQFKYLL*CWSGGWSKSHN Trigger: ATTATGTGACTTAGACCAGCCACCACTCCAACACCATAGTAAATACTTAAATTGATAGCTATGATACCATAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| 3UTR TCA 72 bp | AAAGCAAAGCTAAGGGAGCCTTTCAGATCCATGATGTaGAATGTAAACATCCTTTGGTTTTTGTTCAATATT | + |
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Preference number: 3 (lower is better) Translates to: KAKLREPFRSMM*NVNILWFLFNI Trigger: AATATTGAACAAAAACCAAAGGATGTTTACATTTCACATCATGGATCTGAAAGGCTCCCTTAGCTTTGCTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
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| CDS-3UTR CCA 90 bp | TGCTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAATGCACCGGGAGGCCGTaGAGGAGCGCCGCAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: CSSAAIALVVFYRLRYQQCTGRP*RSAATS Trigger: AGAAGTTGCGGCGCTCCTCCACGGCCTCCCGGTGCA...TTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| CDS-3UTR CCA 90 bp | ACATATTATCCCCGTCTGCAGGAAACTGAAATGGTAAAACCACAGGCAAAGAAATGCACCGGGAGGCCGTaGAGGAGCGCCGCAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: TYYPRLQETEMVKPQAKKCTGRP*RSAATS Trigger: AGAAGTTGCGGCGCTCCTCCACGGCCTCCCGGTGCA...TTTCTTTGCCTGTGGTTTTACCATTTCAGTTTCCTGCAGACGGGGATAATATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| CDS-3UTR TCA 90 bp | TGCTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACACACTGGATGCTTGTaGTCCACAGTGGTGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: CSSAAIALVVFYRLRYQQHTGCL*STVVVV Trigger: CACGACCACCACTGTGGATCACAAGCATCCAGTGTG...TTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| CDS-3UTR GCA 90 bp | ACATATTATCCCCGTCTGCAGGAAACTGAAATGGTAAAACCACAGGCAAAGAAAAGTGGTGGTCGTGAATaGACCGGGAGGCCGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TYYPRLQETEMVKPQAKKSGGRE*TGRPWR Trigger: CCTCCACGGCCTCCCGGTGCATTCACGACCACCACT...TTTCTTTGCCTGTGGTTTTACCATTTCAGTTTCCTGCAGACGGGGATAATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| CDS-3UTR TCA 90 bp | GCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATGATGCCTTCTTTCCACACTGGATGCTTGTaGTCCACAGTGGTGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: ALVVFYRLRYQQQMMPSFHTGCL*STVVVV Trigger: CACGACCACCACTGTGGATCACAAGCATCCAGTGTG...GAAAGAAGGCATCATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| 3UTR CAA 72 bp | CAGGTGAGTTCTAGGACCCTGATTACTGTCACTGAATaGAGACCCAGTGGGGAAAACTTCAGAGGTTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: QVSSRTLITVTE*RPSGENFRGCY Trigger: GTAGCAACCTCTGAAGTTTTCCCCACTGGGTCTCAATTCAGTGACAGTAATCAGGGTCCTAGAACTCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| CDS-3UTR GCA 90 bp | TGCTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAAGGCAAAAGAAAGTGCTaGTTGTACAGGGAGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CSSAAIALVVFYRLRYQQGKRKC*LYREVP Trigger: TGGAACCTCCCTGTACAAGCAGCACTTTCTTTTGCC...TTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| CDS-3UTR GCA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATGGATATGGATGCTTGTaGAGAATCGTCTCGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSCYCTGGVLQVKIPATDGYGCL*RIVSPS Trigger: AGAGGGCGAGACGATTCTGCACAAGCATCCATATCC...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| CDS-3UTR CCA 90 bp | TGCTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAAGCTCTGCCTAATGTTTaGCTGTGGGTCACTGCATTT | + |
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Preference number: 4 (lower is better) Translates to: CSSAAIALVVFYRLRYQQALPNV*LWVTAF Trigger: AAATGCAGTGACCCACAGCCAAACATTAGGCAGAGC...TTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
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| CDS-3UTR TCA 90 bp | TGCTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAAGTTGTCAAGTTCTTCTaGCAAATCTGCCAGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: CSSAAIALVVFYRLRYQQVVKFF*QICQIC Trigger: GCAGATCTGGCAGATTTGTCAGAAGAACTTGACAAC...TTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| CDS-3UTR TCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTCACACTGGATGCTTGTaGTCCACAGTGGTGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: WVEKCTVSSRSYVKANTVHTGCL*STVVVV Trigger: CACGACCACCACTGTGGATCACAAGCATCCAGTGTG...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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| CDS-3UTR GCA 90 bp | ACATATTATCCCCGTCTGCAGGAAACTGAAATGGTAAAACCACAGGCAAAGAAAGGATTCCCCAAGCTCTaGCTAATGTTTGGCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TYYPRLQETEMVKPQAKKGFPKL*LMFGCG Trigger: CCCACAGCCAAACATTAGGCAGAGCTTGGGGAATCC...TTTCTTTGCCTGTGGTTTTACCATTTCAGTTTCCTGCAGACGGGGATAATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
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| CDS-3UTR GCA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATGTCGATGGATATGGATaGTTGTGCAGAATCGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSCYCTGGVLQVKIPATDVDGYG*LCRIVS Trigger: CGAGACGATTCTGCACAAGCATCCATATCCATCGAC...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAAAGTCTGGATCTGGGATaGATGAGTATTTTGCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSAAIALVVFYRLRYQQSLDLG*MSILLE Trigger: TTCGAGCAAAATACTCATTCATCCCAGATCCAGACT...TTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATGTTGTCAAGTTCTTCTaGCAAATCTGCCAGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSCYCTGGVLQVKIPATDVVKFF*QICQIC Trigger: GCAGATCTGGCAGATTTGTCAGAAGAACTTGACAAC...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATAGTCTGGATCTGGGATaGATGAGTATTTTGCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSCYCTGGVLQVKIPATDSLDLG*MSILLE Trigger: TTCGAGCAAAATACTCATTCATCCCAGATCCAGACT...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATTGCTTTGTTTCACACTaGATGCTTGTGATCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSCYCTGGVLQVKIPATDCFVSH*MLVIHS Trigger: ACTGTGGATCACAAGCATCCAGTGTGAAACAAAGCA...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR TCA 90 bp | GCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATGATGCCTTCTTTCTCTCGAATTTCCAAGTaGTCAAACCGACATTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALVVFYRLRYQQQMMPSFSRISK*SNRHSN Trigger: ATTCGAATGTCGGTTTGATCACTTGGAAATTCGAGA...GAAAGAAGGCATCATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATTCTCGAATTTCCAAGTaGTCAAACCGACATTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSCYCTGGVLQVKIPATDSRISK*SNRHSN Trigger: ATTCGAATGTCGGTTTGATCACTTGGAAATTCGAGA...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR TCA 90 bp | ACATATTATCCCCGTCTGCAGGAAACTGAAATGGTAAAACCACAGGCAAAGAAAAATCGTCTCGCCCTCTaGCATAAATTTCACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TYYPRLQETEMVKPQAKKNRLAL*HKFHRE Trigger: TTCCCTGTGAAATTTATGTCAGAGGGCGAGACGATT...TTTCTTTGCCTGTGGTTTTACCATTTCAGTTTCCTGCAGACGGGGATAATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTGGCAAAAGAAAGTGCTaGTTGTACAGGGAGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVEKCTVSSRSYVKANTVGKRKC*LYREVP Trigger: TGGAACCTCCCTGTACAAGCAGCACTTTCTTTTGCC...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR GCA 90 bp | AGTACTTTCTTGCACTGGAGATTTTTACTATCCTCTGGCTTTGCATTTTTCACTGGATATGGATGCTTGTaGAGAATCGTCTCGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: STFLHWRFLLSSGFAFFTGYGCL*RIVSPS Trigger: AGAGGGCGAGACGATTCTGCACAAGCATCCATATCC...AGTGAAAAATGCAAAGCCAGAGGATAGTAAAAATCTCCAGTGCAAGAAAGTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATAAAAGTCGATGGATATaGATGCTTGTGCAGAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSCYCTGGVLQVKIPATDKSRWI*MLVQNR Trigger: ACGATTCTGCACAAGCATCCATATCCATCGACTTTT...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTAATCGTCTCGCCCTCTaGCATAAATTTCACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVEKCTVSSRSYVKANTVNRLAL*HKFHRE Trigger: TTCCCTGTGAAATTTATGTCAGAGGGCGAGACGATT...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR GCA 90 bp | AGTACTTTCTTGCACTGGAGATTTTTACTATCCTCTGGCTTTGCATTTTTCACTGGCAAAAGAAAGTGCTaGTTGTACAGGGAGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STFLHWRFLLSSGFAFFTGKRKC*LYREVP Trigger: TGGAACCTCCCTGTACAAGCAGCACTTTCTTTTGCC...AGTGAAAAATGCAAAGCCAGAGGATAGTAAAAATCTCCAGTGCAAGAAAGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR GCA 90 bp | GTACATATCACCATGAGCAAGGTCTTTATAATAAATTACAGTACAGTCCCATCAGGATATGGATGCTTGTaGAGAATCGTCTCGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHITMSKVFIINYSTVPSGYGCL*RIVSPS Trigger: AGAGGGCGAGACGATTCTGCACAAGCATCCATATCC...TGATGGGACTGTACTGTAATTTATTATAAAGACCTTGCTCATGGTGATATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTCCAGAGAGCTCAAACTaGCAATCTGGAATGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: WVEKCTVSSRSYVKANTVPESSN*QSGMGF Trigger: AAATCCCATTCCAGATTGCCAGTTTGAGCTCTCTGG...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216286.2 |
||
| CDS-3UTR TCA 90 bp | CATAGCTATCAATTTAAGTATTTACTATGGTGTTGGAGTGGTGGCTGGTCTAAGTTCTTATGGTGTCCTTaGTCATTCTGGCTCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSYQFKYLLWCWSGGWSKFLWCP*SFWLIP Trigger: TGGAATGAGCCAGAATGATCAAGGACACCATAAGAA...CTTAGACCAGCCACCACTCCAACACCATAGTAAATACTTAAATTGATAGCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGAAAAATGCACTGTTTCAAGCAGAAGCTATGTAAAGGCTAACACAGTTTGGATCTGGGATGAATaGGTATTTTGCTCGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: WVEKCTVSSRSYVKANTVWIWDE*VFCSKS Trigger: GGATTTCGAGCAAAATACTCATTCATCCCAGATCCA...AACTGTGTTAGCCTTTACATAGCTTCTGCTTGAAACAGTGCATTTTTCTACCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR GCA 90 bp | AGCTTGTTCTCTTACAGTGGTTCAGACTCAAATAATTCTCAAAACTCAAGATACGTCGATGGATATGGATaGTTGTGCAGAATCGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLFSYSGSDSNNSQNSRYVDGYG*LCRIVS Trigger: CGAGACGATTCTGCACAAGCATCCATATCCATCGAC...GTATCTTGAGTTTTGAGAATTATTTGAGTCTGAACCACTGTAAGAGAACAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
||
| CDS-3UTR GCA 90 bp | GTACATATCACCATGAGCAAGGTCTTTATAATAAATTACAGTACAGTCCCATCAGTCGATGGATATGGATaGTTGTGCAGAATCGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VHITMSKVFIINYSTVPSVDGYG*LCRIVS Trigger: CGAGACGATTCTGCACAAGCATCCATATCCATCGAC...TGATGGGACTGTACTGTAATTTATTATAAAGACCTTGCTCATGGTGATATGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR TCA 90 bp | GTACATATCACCATGAGCAAGGTCTTTATAATAAATTACAGTACAGTCCCATCAGTTGTCAAGTTCTTCTaGCAAATCTGCCAGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHITMSKVFIINYSTVPSVVKFF*QICQIC Trigger: GCAGATCTGGCAGATTTGTCAGAAGAACTTGACAAC...TGATGGGACTGTACTGTAATTTATTATAAAGACCTTGCTCATGGTGATATGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR CCA 90 bp | CATAGCTATCAATTTAAGTATTTACTATGGTGTTGGAGTGGTGGCTGGTCTAAGAAAAGTCGATGGATATaGATGCTTGTGCAGAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: HSYQFKYLLWCWSGGWSKKSRWI*MLVQNR Trigger: ACGATTCTGCACAAGCATCCATATCCATCGACTTTT...CTTAGACCAGCCACCACTCCAACACCATAGTAAATACTTAAATTGATAGCTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR CCA 90 bp | GTACATATCACCATGAGCAAGGTCTTTATAATAAATTACAGTACAGTCCCATCATGCTTTGTTTCACACTaGATGCTTGTGATCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHITMSKVFIINYSTVPSCFVSH*MLVIHS Trigger: ACTGTGGATCACAAGCATCCAGTGTGAAACAAAGCA...TGATGGGACTGTACTGTAATTTATTATAAAGACCTTGCTCATGGTGATATGTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| 3UTR CAA 72 bp | GGGATGAACGACAGCAATGTGTTGGTATCATATAGTTaGTACTTAGTACTTTCTTGCACTGGAGATTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GMNDSNVLVSYS*YLVLSCTGDFY Trigger: GTAAAAATCTCCAGTGCAAGAAAGTACTAAGTACAAACTATATGATACCAACACATTGCTGTCGTTCATCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR TCA 90 bp | GTACATATCACCATGAGCAAGGTCTTTATAATAAATTACAGTACAGTCCCATCATCTCGAATTTCCAAGTaGTCAAACCGACATTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VHITMSKVFIINYSTVPSSRISK*SNRHSN Trigger: ATTCGAATGTCGGTTTGATCACTTGGAAATTCGAGA...TGATGGGACTGTACTGTAATTTATTATAAAGACCTTGCTCATGGTGATATGTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR CCA 90 bp | GTACATATCACCATGAGCAAGGTCTTTATAATAAATTACAGTACAGTCCCATCAAAAAGTCGATGGATATaGATGCTTGTGCAGAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: VHITMSKVFIINYSTVPSKSRWI*MLVQNR Trigger: ACGATTCTGCACAAGCATCCATATCCATCGACTTTT...TGATGGGACTGTACTGTAATTTATTATAAAGACCTTGCTCATGGTGATATGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAAGATGGATATGGATGCTaGTGCAGAATCGTCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSSAAIALVVFYRLRYQQDGYGC*CRIVSP Trigger: GGGCGAGACGATTCTGCACAAGCATCCATATCCATC...TTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | GCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATGATGCCTTCTTTCTCCATCTTGGGTTTTTaGGGCCACAGCAATCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALVVFYRLRYQQQMMPSFSILGF*GHSNPF Trigger: GAAGGGATTGCTGTGGCCCAAAAAACCCAAGATGGA...GAAAGAAGGCATCATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATTCCATCTTGGGTTTTTaGGGCCACAGCAATCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSCYCTGGVLQVKIPATDSILGF*GHSNPF Trigger: GAAGGGATTGCTGTGGCCCAAAAAACCCAAGATGGA...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAAAGGGCACTCATGAGCTaGTTTGAAAGTGTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSAAIALVVFYRLRYQQRALMS*FESVAA Trigger: AGCAGCTACACTTTCAAACAAGCTCATGAGTGCCCT...TTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATCTGCTTGGCCAGGCTTaGTTTTCTCTTCTTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSCYCTGGVLQVKIPATDLLGQA*FSLLAL Trigger: TAGAGCAAGAAGAGAAAACAAAGCCTGGCCAAGCAG...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAAACAGTGCTGCAGAACTaGGCCTTCAGATTTTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: CSSAAIALVVFYRLRYQQTVLQN*AFRFSI Trigger: TATCGAAAATCTGAAGGCCAAGTTCTGCAGCACTGT...TTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAGGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATAGGGCACTCATGAGCTaGTTTGAAAGTGTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSCYCTGGVLQVKIPATDRALMS*FESVAA Trigger: AGCAGCTACACTTTCAAACAAGCTCATGAGTGCCCT...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCTGCTATTGCACTGGTGGTGTTTTACAGGTTAAGATACCAGCAACAGATAAAAGAAAGTGCTGCTaGTACAGGGAGGTTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LSCYCTGGVLQVKIPATDKRKCC*YREVPQ Trigger: TTGTGGAACCTCCCTGTACAAGCAGCACTTTCTTTT...ATCTGTTGCTGGTATCTTAACCTGTAAAACACCACCAGTGCAATAGCAGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | CATAGCTATCAATTTAAGTATTTACTATGGTGTTGGAGTGGTGGCTGGTCTAAGGATGGATATGGATGCTaGTGCAGAATCGTCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSYQFKYLLWCWSGGWSKDGYGC*CRIVSP Trigger: GGGCGAGACGATTCTGCACAAGCATCCATATCCATC...CTTAGACCAGCCACCACTCCAACACCATAGTAAATACTTAAATTGATAGCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR CAA 90 bp | ACATATTATCCCCGTCTGCAGGAAACTGAAATGGTAAAACCACAGGCAAAGAAACTGCTTGGCCAGGCTTaGTTTTCTCTTCTTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TYYPRLQETEMVKPQAKKLLGQA*FSLLAL Trigger: TAGAGCAAGAAGAGAAAACAAAGCCTGGCCAAGCAG...TTTCTTTGCCTGTGGTTTTACCATTTCAGTTTCCTGCAGACGGGGATAATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | ACATATTATCCCCGTCTGCAGGAAACTGAAATGGTAAAACCACAGGCAAAGAAAAGGGCACTCATGAGCTaGTTTGAAAGTGTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TYYPRLQETEMVKPQAKKRALMS*FESVAA Trigger: AGCAGCTACACTTTCAAACAAGCTCATGAGTGCCCT...TTTCTTTGCCTGTGGTTTTACCATTTCAGTTTCCTGCAGACGGGGATAATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | ACATATTATCCCCGTCTGCAGGAAACTGAAATGGTAAAACCACAGGCAAAGAAAACAGTGCTGCAGAACTaGGCCTTCAGATTTTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: TYYPRLQETEMVKPQAKKTVLQN*AFRFSI Trigger: TATCGAAAATCTGAAGGCCAAGTTCTGCAGCACTGT...TTTCTTTGCCTGTGGTTTTACCATTTCAGTTTCCTGCAGACGGGGATAATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTGTTCTCTTACAGTGGTTCAGACTCAAATAATTCTCAAAACTCAAGATACGATGGATATGGATGCTaGTGCAGAATCGTCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLFSYSGSDSNNSQNSRYDGYGC*CRIVSP Trigger: GGGCGAGACGATTCTGCACAAGCATCCATATCCATC...GTATCTTGAGTTTTGAGAATTATTTGAGTCTGAACCACTGTAAGAGAACAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
||
| CDS-3UTR CAA 90 bp | CATAGCTATCAATTTAAGTATTTACTATGGTGTTGGAGTGGTGGCTGGTCTAAGAAAAGAAAGTGCTGCTaGTACAGGGAGGTTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: HSYQFKYLLWCWSGGWSKKRKCC*YREVPQ Trigger: TTGTGGAACCTCCCTGTACAAGCAGCACTTTCTTTT...CTTAGACCAGCCACCACTCCAACACCATAGTAAATACTTAAATTGATAGCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR CAA 90 bp | CATAGCTATCAATTTAAGTATTTACTATGGTGTTGGAGTGGTGGCTGGTCTAAGTTTCTTATGGTGTCCTaGATCATTCTGGCTCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSYQFKYLLWCWSGGWSKFLMVS*IILAHS Trigger: GGAATGAGCCAGAATGATCAAGGACACCATAAGAAA...CTTAGACCAGCCACCACTCCAACACCATAGTAAATACTTAAATTGATAGCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
||
| CDS-3UTR CAA 90 bp | GTACATATCACCATGAGCAAGGTCTTTATAATAAATTACAGTACAGTCCCATCAACAGTGCTGCAGAACTaGGCCTTCAGATTTTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: VHITMSKVFIINYSTVPSTVLQN*AFRFSI Trigger: TATCGAAAATCTGAAGGCCAAGTTCTGCAGCACTGT...TGATGGGACTGTACTGTAATTTATTATAAAGACCTTGCTCATGGTGATATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTGTTCTCTTACAGTGGTTCAGACTCAAATAATTCTCAAAACTCAAGATACAAAAGAAAGTGCTGCTaGTACAGGGAGGTTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SLFSYSGSDSNNSQNSRYKRKCC*YREVPQ Trigger: TTGTGGAACCTCCCTGTACAAGCAGCACTTTCTTTT...GTATCTTGAGTTTTGAGAATTATTTGAGTCTGAACCACTGTAAGAGAACAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
||
| CDS GCA 72 bp | TTCCATCCTTATTCTTCCACAGGATTCCCCAAGCTCTaGCTAATGTTTGGCTGTGGGTCACTGCATTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FHPYSSTGFPKL*LMFGCGSLHLF Trigger: GAACAAATGCAGTGACCCACAGCCAAACATTAGGCAGAGCTTGGGGAATCCTGTGGAAGAATAAGGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109686.4 |
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| CDS CAA 72 bp | TATATAATAGCGTTCATCAAAGGTCAGCTCTATTCGTaGACGAGGAGCAGCTTCCAAAATATAGATACACTC | + |
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Preference number: 6 (lower is better) Translates to: YIIAFIKGQLYS*TRSSFQNIDTL Trigger: GAGTGTATCTATATTTTGGAAGCTGCTCCTCGTCAACGAATAGAGCTGACCTTTGATGAACGCTATTATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109686.4 ENSMUST00000209479.2 ENSMUST00000216286.2 |
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