Pregenerated sensors for NETO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050321Ensembl transcript IDs: ENSMUST00000058829.4, ENSMUST00000235167.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAAAACCTAAGGAGCACTTGGTGATCAGCAACCAAATTAGGAAATaGACACATCATTGTGCAGCAGCAGGGAGTCTTGCCGAAGGAATA | + |
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Preference number: 1 (lower is better) Translates to: LKPKEHLVISNQIRK*THHCAAAGSLAEGI Trigger: TATTCCTTCGGCAAGACTCCCTGCTGCTGCACAATGATGTGTCCATTTCCTAATTTGGTTGCTGATCACCAAGTGCTCCTTAGGTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CCA 90 bp | TGCACTGCCCTTGGACAGAATTGCAAAGCTAAACTCAAGCTGACGTaGGTATTTCATGTAACATGGGCTACCACCAAGATTCTAAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: CTALGQNCKAKLKLT*VFHVTWATTKILKN Trigger: ATTCTTTAGAATCTTGGTGGTAGCCCATGTTACATGAAATACCCACGTCAGCTTGAGTTTAGCTTTGCAATTCTGTCCAAGGGCAGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR TCA 90 bp | CCAACCATCTGTTACCTTTATTGTCTTATTATCCATCATATTAATTaGATTCAGTATGTGTCGTTCTGCACCCCAGTTAATAAGCATACG | + |
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Preference number: 1 (lower is better) Translates to: PTICYLYCLIIHHIN*IQYVSFCTPVNKHT Trigger: CGTATGCTTATTAACTGGGGTGCAGAACGACACATACTGAATTCAATTAATATGATGGATAATAAGACAATAAAGGTAACAGATGGTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CCA 90 bp | AATTGCAAAGCTAAACTCAAGCTGACGTGGGTATTTCATGTAACATaGGCTACCACCAAGATTCTAAAGAATGAATCAACAAATTTACAT | + |
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Preference number: 1 (lower is better) Translates to: NCKAKLKLTWVFHVT*ATTKILKNESTNLH Trigger: ATGTAAATTTGTTGATTCATTCTTTAGAATCTTGGTGGTAGCCCATGTTACATGAAATACCCACGTCAGCTTGAGTTTAGCTTTGCAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CAA 90 bp | GCATCGTCTTCACTCAGTTTCCACTGTTTGCTAAGGAAGGGGCTCTaGTTGAGTTCAGGCTTCTCTCTTTCAGCTCATTTAGTTAAATTG | + |
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Preference number: 2 (lower is better) Translates to: ASSSLSFHCLLRKGL*LSSGFSLSAHLVKL Trigger: CAATTTAACTAAATGAGCTGAAAGAGAGAAGCCTGAACTCAACAAGAGCCCCTTCCTTAGCAAACAGTGGAAACTGAGTGAAGACGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATCTTGTGTTGAGCAATTaGACTGCCCTTGGACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYLVLSN*TALGQN Trigger: ATTCTGTCCAAGGGCAGTGCAATTGCTCAACACAAG...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CAA 90 bp | TCGTCTTCACTCAGTTTCCACTGTTTGCTAAGGAAGGGGCTCTTGTaGAGTTCAGGCTTCTCTCTTTCAGCTCATTTAGTTAAATTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSLSFHCLLRKGLL*SSGFSLSAHLVKLF Trigger: AAACAATTTAACTAAATGAGCTGAAAGAGAGAAGCCTGAACTCAACAAGAGCCCCTTCCTTAGCAAACAGTGGAAACTGAGTGAAGACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATTCAAAAAGCCATTTGTaGAACTCGGTATCTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYSKSHL*NSVSSL Trigger: AAGGGAAGATACCGAGTTTCACAAATGGCTTTTTGA...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATTTTTCAATGAATGGCTaGAAAATAGCATGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYFSMNG*KIAWLS Trigger: GCTGAGCCATGCTATTTTCCAGCCATTCATTGAAAA...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATTTTTTCACTGAAGCTTaGTCAAAATCACGCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYFFTEA*SKSRRN Trigger: ATTCCTGCGTGATTTTGAGCAAGCTTCAGTGAAAAA...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR-3UTR CCA 90 bp | TATAGGGCTCATCTGGTTCTCCTAAGAAAATGCTATTCTCATATTTCAACTTCTAGGCCTCAAGGACTCTaGAAAGTGATCCTAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: YRAHLVLLRKCYSHISTSRPQGL*KVILAS Trigger: AGATGCTAGGATCACTTTCCAGAGTCCTTGAGGCCT...AGAAGTTGAAATATGAGAATAGCATTTTCTTAGGAGAACCAGATGAGCCCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CAA 90 bp | AGGGAGTCTTGCCGAAGGAATAACACATGTCTGCAACTCTTAAGTTaGGATAAAGGCAGTGGAATGAATTTAGAAATATGTCCACTTTTC | + |
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Preference number: 2 (lower is better) Translates to: RESCRRNNTCLQLLS*DKGSGMNLEICPLF Trigger: GAAAAGTGGACATATTTCTAAATTCATTCCACTGCCTTTATCCAAACTTAAGAGTTGCAGACATGTGTTATTCCTTCGGCAAGACTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CAA 90 bp | GTGTATGACCTAATTACTCTAAACACAAATATTTCCTTGCACGTGTaGGCAATGGTCTCTTTCTCTGTCTTCTTAGGAAGCCTACACTTT | + |
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Preference number: 2 (lower is better) Translates to: VYDLITLNTNISLHV*AMVSFSVFLGSLHF Trigger: AAAGTGTAGGCTTCCTAAGAAGACAGAGAAAGAGACCATTGCCAACACGTGCAAGGAAATATTTGTGTTTAGAGTAATTAGGTCATACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATCAATTTTTCAATGAATaGCTGGAAAATAGCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYQFFNE*LENSMA Trigger: AGCCATGCTATTTTCCAGCCATTCATTGAAAAATTG...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CCA 72 bp | AAGGAGCACTTGGTGATCAGCAACCAAATTAGGAAATaGACACATCATTGTGCAGCAGCAGGGAGTCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: KEHLVISNQIRK*THHCAAAGSLA Trigger: GGCAAGACTCCCTGCTGCTGCACAATGATGTGTCCATTTCCTAATTTGGTTGCTGATCACCAAGTGCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR GCA 72 bp | CTTGTGTTGAGCAATTGCACTGCCCTTGGACAGAATTaGAAAGCTAAACTCAAGCTGACGTGGGTATTTCAT | + |
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Preference number: 3 (lower is better) Translates to: LVLSNCTALGQN*KAKLKLTWVFH Trigger: ATGAAATACCCACGTCAGCTTGAGTTTAGCTTTGCAATTCTGTCCAAGGGCAGTGCAATTGCTCAACACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR TCA 72 bp | ACACATCATACGTCCTGGTCAGATGTAATTTTTGCTTaGGTATTGGTGAGTAGCAAGAGACACCCCCAAACA | + |
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Preference number: 3 (lower is better) Translates to: THHTSWSDVIFA*VLVSSKRHPQT Trigger: TGTTTGGGGGTGTCTCTTGCTACTCACCAATACTCAAGCAAAAATTACATCTGACCAGGACGTATGATGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| 3UTR CCA 72 bp | CTTGGACAGAATTGCAAAGCTAAACTCAAGCTGACGTaGGTATTTCATGTAACATGGGCTACCACCAAGATT | + |
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Preference number: 3 (lower is better) Translates to: LGQNCKAKLKLT*VFHVTWATTKI Trigger: AATCTTGGTGGTAGCCCATGTTACATGAAATACCCACGTCAGCTTGAGTTTAGCTTTGCAATTCTGTCCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CCA 72 bp | TATCCCCAGAAACACACCACCAACTCTGTCTACTGTTaGAACCATATTTTCTGTAACCCTTCTTTACTTGCC | + |
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Preference number: 3 (lower is better) Translates to: YPQKHTTNSVYC*NHIFCNPSLLA Trigger: GGCAAGTAAAGAAGGGTTACAGAAAATATGGTTCCAACAGTAGACAGAGTTGGTGGTGTGTTTCTGGGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR TCA 72 bp | GAAAAGCAACCGATGGTATGCTCATGCTGGTTCACATaGATACAAAACTTCTCCAAATGCTCCAAGCAAATG | + |
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Preference number: 3 (lower is better) Translates to: EKQPMVCSCWFT*IQNFSKCSKQM Trigger: CATTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCGGTTGCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| 3UTR GCA 72 bp | ATTAGACATCAGAACATCAACCTTGTGTTGAGCAATTaGACTGCCCTTGGACAGAATTGCAAAGCTAAACTC | + |
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Preference number: 3 (lower is better) Translates to: IRHQNINLVLSN*TALGQNCKAKL Trigger: GAGTTTAGCTTTGCAATTCTGTCCAAGGGCAGTGCAATTGCTCAACACAAGGTTGATGTTCTGATGTCTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR-3UTR CAA 90 bp | TATAGGGCTCATCTGGTTCTCCTAAGAAAATGCTATTCTCATATTTCAACTTCTCTCAGTTTCCACTGTTaGCTAAGGAAGGGGCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: YRAHLVLLRKCYSHISTSLSFHC*LRKGLL Trigger: CAAGAGCCCCTTCCTTAGCAAACAGTGGAAACTGAG...AGAAGTTGAAATATGAGAATAGCATTTTCTTAGGAGAACCAGATGAGCCCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR-3UTR CAA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATATCCACTTAGTGGGTTaGAGGCATAAATACCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYIHLVG*RHKYLS Trigger: TGAAAGGTATTTATGCCTCAAACCCACTAAGTGGAT...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR-3UTR CAA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATACTCGGTATCTTCCCTaGGTAAAAACAAAAAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYTRYLP*VKTKRK Trigger: TTTCCTTTTTGTTTTTACCAAGGGAAGATACCGAGT...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CCA 72 bp | GCTAAACTCAAGCTGACGTGGGTATTTCATGTAACATaGGCTACCACCAAGATTCTAAAGAATGAATCAACA | + |
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Preference number: 3 (lower is better) Translates to: AKLKLTWVFHVT*ATTKILKNEST Trigger: TGTTGATTCATTCTTTAGAATCTTGGTGGTAGCCCATGTTACATGAAATACCCACGTCAGCTTGAGTTTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CCA 72 bp | ACAACTGTAATGATTCCCAAAGAGAAAAGCAACCGATaGTATGCTCATGCTGGTTCACATGAATACAAAACT | + |
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Preference number: 3 (lower is better) Translates to: TTVMIPKEKSNR*YAHAGSHEYKT Trigger: AGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| 3UTR TCA 72 bp | CATGAATACAAAACTTCTCCAAATGCTCCAAGCAAATaGCAGAAGCTTGATGAAGCTTGCTTTTGCATTTGT | + |
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Preference number: 3 (lower is better) Translates to: HEYKTSPNAPSK*QKLDEACFCIC Trigger: ACAAATGCAAAAGCAAGCTTCATCAAGCTTCTGTCATTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| 3UTR TCA 72 bp | CCACCCAAATCAAGTAATGGTCCTCAAGTCTGTGTATaGCCTAATTACTCTAAACACAAATATTTCCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: PPKSSNGPQVCV*PNYSKHKYFLA Trigger: TGCAAGGAAATATTTGTGTTTAGAGTAATTAGGTCATACACAGACTTGAGGACCATTACTTGATTTGGGTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR TCA 72 bp | AGCATCTCCCCTATCGACAAGTCAATATCTGTAAGTTaGTTGATCATCATCCATAATGATGTACATCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SISPIDKSISVS*LIIIHNDVHLL Trigger: TAGAAGATGTACATCATTATGGATGATGATCAATCAACTTACAGATATTGACTTGTCGATAGGGGAGATGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | TGGACACATCATTGTGCAGCAGCAGGGAGTCTTGCCGAAGGAATAACACATGTCGACACACTCTCGGTCTaGGGGATATTTGCTGGGATA | + |
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Preference number: 4 (lower is better) Translates to: WTHHCAAAGSLAEGITHVDTLSV*GIFAGI Trigger: TATCCCAGCAAATATCCCCCAGACCGAGAGTGTGTC...GACATGTGTTATTCCTTCGGCAAGACTCCCTGCTGCTGCACAATGATGTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CAA 72 bp | TGCCCTTCTCTGTCTTCATATAGCTGTAATTACAGGTaGGCCACCGAGTACTCCTGTCCGTGTGCTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: CPSLSSYSCNYR*ATEYSCPCAAS Trigger: ACTTGCAGCACACGGACAGGAGTACTCGGTGGCCAACCTGTAATTACAGCTATATGAAGACAGAGAAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR GCA 90 bp | TTAACAGAGTTATATTTGCACATTGGTGGAAAACACTGTAGTAGTCAGCTCGGTCCTCGTCTGCCCACATaGGGATCACCCCAAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LTELYLHIGGKHCSSQLGPRLPT*GSPQGL Trigger: CAGGCCTTGGGGTGATCCGCATGTGGGCAGACGAGG...ACCGAGCTGACTACTACAGTGTTTTCCACCAATGTGCAAATATAACTCTGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR GCA 90 bp | TTAACAGAGTTATATTTGCACATTGGTGGAAAACACTGTAGTAGTCAGCTCGGTACGGCTACCCTCGTCTaGCCACATGCGGATCACCCC | + |
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Preference number: 4 (lower is better) Translates to: LTELYLHIGGKHCSSQLGTATLV*PHADHP Trigger: GGGGTGATCCGCATGTGGGCAGACGAGGGTAGCCGT...ACCGAGCTGACTACTACAGTGTTTTCCACCAATGTGCAAATATAACTCTGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | ACAAAACTTCTCCAAATGCTCCAAGCAAATGACAGAAGCTTGATGAAGCTTGCTCCGTCCCACTGGTGTTaGTCAGCTGATCCAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TKLLQMLQANDRSLMKLAPSHWC*SADPAG Trigger: GCCTGCTGGATCAGCTGACCAACACCAGTGGGACGG...AGCAAGCTTCATCAAGCTTCTGTCATTTGCTTGGAGCATTTGGAGAAGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR GCA 90 bp | TGGACACATCATTGTGCAGCAGCAGGGAGTCTTGCCGAAGGAATAACACATGTCCACTGGCAGAAGCTTTaGCTTCCTTCAGAATCTGTA | + |
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Preference number: 4 (lower is better) Translates to: WTHHCAAAGSLAEGITHVHWQKL*LPSESV Trigger: TACAGATTCTGAAGGAAGGCAAAGCTTCTGCCAGTG...GACATGTGTTATTCCTTCGGCAAGACTCCCTGCTGCTGCACAATGATGTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | GAATGTGCTGGCTGCACAACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGGTAAATCTTGGATCGTaGTGGGGCTCGGATGTACCA | + |
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Preference number: 4 (lower is better) Translates to: ECAGCTTVMIPKEKSNRWVNLGS*WGSDVP Trigger: TGGTACATCCGAGCCCCACCACGATCCAAGATTTAC...CCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGTTGTGCAGCCAGCACATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR TCA 90 bp | CTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAAATGACTGCTTAGAGACCCAATaGGGCAGAACCGCTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: LMLVHMNTKLLQMLQANDCLETQ*GRTAGQ Trigger: CTGTCCAGCGGTTCTGCCTCATTGGGTCTCTAAGCA...GTCATTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| CDS-3UTR GCA 90 bp | CGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAACACCTCCCTCTGCATaGTTTGTCCACGTTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: RWYAHAGSHEYKTSPNAPTPPSA*FVHVPH Trigger: GTGTGGAACGTGGACAAAGCATGCAGAGGGAGGTGT...TGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR GCA 90 bp | ACAAAACTTCTCCAAATGCTCCAAGCAAATGACAGAAGCTTGATGAAGCTTGCTAATCCTCCACGGAGCTaGTTCCGTCATAGACCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TKLLQMLQANDRSLMKLANPPRS*FRHRPP Trigger: TGGCGGTCTATGACGGAAGCAGCTCCGTGGAGGATT...AGCAAGCTTCATCAAGCTTCTGTCATTTGCTTGGAGCATTTGGAGAAGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | GAATGTGCTGGCTGCACAACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGCAGATTTTTCGTGTCTaGATAGCCTGTGGCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ECAGCTTVMIPKEKSNRWQIFRV*IACGLW Trigger: CCACAAGCCACAGGCTATCCAGACACGAAAAATCTG...CCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGTTGTGCAGCCAGCACATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| CDS-3UTR TCA 90 bp | TTAACAGAGTTATATTTGCACATTGGTGGAAAACACTGTAGTAGTCAGCTCGGTCTGGTGTTGGTCAGCTaGTCCAGCAGGCTGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LTELYLHIGGKHCSSQLGLVLVS*SSRLVF Trigger: GAAAACCAGCCTGCTGGATCAGCTGACCAACACCAG...ACCGAGCTGACTACTACAGTGTTTTCCACCAATGTGCAAATATAACTCTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR TCA 90 bp | TTAACAGAGTTATATTTGCACATTGGTGGAAAACACTGTAGTAGTCAGCTCGGTTGCTTAGAGACCCAATaGGGCAGAACCGCTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: LTELYLHIGGKHCSSQLGCLETQ*GRTAGQ Trigger: CTGTCCAGCGGTTCTGCCTCATTGGGTCTCTAAGCA...ACCGAGCTGACTACTACAGTGTTTTCCACCAATGTGCAAATATAACTCTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR GCA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATCTCGGATGTACCATTTaGAATCCACGGCTTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYLGCTI*NPRLHW Trigger: CCAGTGAAGCCGTGGATTGCAAATGGTACATCCGAG...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | ACAACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGTATGCTCATGCTGGTAATCCACGGCTTCACTaGCAGAAGCTTTGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TTVMIPKEKSNRWYAHAGNPRLH*QKLCLP Trigger: AGGAAGGCAAAGCTTCTGCCAGTGAAGCCGTGGATT...ACCAGCATGAGCATACCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | ACAACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGTATGCTCATGCTGGTGGCTCAAACACCTCCTaGAAAACGGTCTGGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TTVMIPKEKSNRWYAHAGGSNTS*KTVWSK Trigger: CTTTGACCAGACCGTTTTCCAGGAGGTGTTTGAGCC...ACCAGCATGAGCATACCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | TATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAAAGACTGCCTTTCGCGCTaGACAGTTGGGATCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: YAHAGSHEYKTSPNAPSKDCLSR*TVGIHS Trigger: ACTGTGGATCCCAACTGTCCAGCGCGAAAGGCAGTC...TTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR TCA 90 bp | TGGACACATCATTGTGCAGCAGCAGGGAGTCTTGCCGAAGGAATAACACATGTCTCTCGAACTTCAATATaGTCAAATTTGCACTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WTHHCAAAGSLAEGITHVSRTSI*SNLHSQ Trigger: TTGGGAGTGCAAATTTGATCATATTGAAGTTCGAGA...GACATGTGTTATTCCTTCGGCAAGACTCCCTGCTGCTGCACAATGATGTGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR TCA 90 bp | GAATGTGCTGGCTGCACAACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGAGTCGGGATCAGGTGTaGAATTATATCGAGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ECAGCTTVMIPKEKSNRWSRDQV*NYIELK Trigger: TTTCAGCTCGATATAATTTCACACCTGATCCCGACT...CCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGTTGTGCAGCCAGCACATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR TCA 90 bp | TATAGGGCTCATCTGGTTCTCCTAAGAAAATGCTATTCTCATATTTCAACTTCTAGGAAGTCACGCCAATaGCCGTCCCACTGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YRAHLVLLRKCYSHISTSRKSRQ*PSHWCW Trigger: CCAACACCAGTGGGACGGTCATTGGCGTGACTTCCT...AGAAGTTGAAATATGAGAATAGCATTTTCTTAGGAGAACCAGATGAGCCCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR TCA 90 bp | GGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAATCGGCGGCATCTTGTaGGTAGTTGTGTTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMLMLVHMNTKLLQMLQAIGGIL*VVVFHD Trigger: GTCATGAAACACAACTACTCACAAGATGCCGCCGAT...TGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| CDS-3UTR TCA 90 bp | ACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGTATGCTCATGCTGGTTCAATCGGCGGCATCTTGTaGGTAGTTGTGTTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TVMIPKEKSNRWYAHAGSIGGIL*VVVFHD Trigger: GTCATGAAACACAACTACTCACAAGATGCCGCCGAT...TGAACCAGCATGAGCATACCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGTATGCTCATGCTGGTTCAAATCTTGGATCGTGGTaGGGCTCGGATGTACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TVMIPKEKSNRWYAHAGSNLGSW*GSDVPF Trigger: AAATGGTACATCCGAGCCCCACCACGATCCAAGATT...TGAACCAGCATGAGCATACCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR CCA 90 bp | TTAACAGAGTTATATTTGCACATTGGTGGAAAACACTGTAGTAGTCAGCTCGGTCTGTGCTGCAGAACTTaGCCTTCAAATCCTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LTELYLHIGGKHCSSQLGLCCRT*PSNPPR Trigger: CCGTGGAGGATTTGAAGGCCAAGTTCTGCAGCACAG...ACCGAGCTGACTACTACAGTGTTTTCCACCAATGTGCAAATATAACTCTGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR CCA 90 bp | GGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAGGATATACACAGTTCTaGAGCCCATTGCAGACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMLMLVHMNTKLLQMLQAGYTQF*SPLQTS Trigger: GCTAGTCTGCAATGGGCTCCAGAACTGTGTATATCC...TGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR CCA 90 bp | GGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCACAGATTTTTCGTGTCTaGATAGCCTGTGGCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GMLMLVHMNTKLLQMLQAQIFRV*IACGLW Trigger: CCACAAGCCACAGGCTATCCAGACACGAAAAATCTG...TGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| 3UTR CAA 72 bp | TCACTCAGTTTCCACTGTTTGCTAAGGAAGGGGCTCTaGTTGAGTTCAGGCTTCTCTCTTTCAGCTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLSFHCLLRKGL*LSSGFSLSAHL Trigger: TAAATGAGCTGAAAGAGAGAAGCCTGAACTCAACAAGAGCCCCTTCCTTAGCAAACAGTGGAAACTGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR TCA 90 bp | ACAAAACTTCTCCAAATGCTCCAAGCAAATGACAGAAGCTTGATGAAGCTTGCTGATGTGAAGAGCATCTaGAACCTGCTGTTACGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TKLLQMLQANDRSLMKLADVKSI*NLLLRL Trigger: TAGCCGTAACAGCAGGTTTCAGATGCTCTTCACATC...AGCAAGCTTCATCAAGCTTCTGTCATTTGCTTGGAGCATTTGGAGAAGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR TCA 90 bp | CGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAGTTCTTGAAAGGATGTaGAGAGCATCTGAAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RWYAHAGSHEYKTSPNAPVLERM*RASETC Trigger: GCAGGTTTCAGATGCTCTTCACATCCTTTCAAGAAC...TGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR TCA 90 bp | AGCAACCGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATTCACAGGGAGGTTCTTaGAAGGATGTGAAGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SNRWYAHAGSHEYKTSPNSQGGS*KDVKSI Trigger: GATGCTCTTCACATCCTTTCAAGAACCTCCCTGTGA...ATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCGGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR TCA 90 bp | ACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGTATGCTCATGCTGGTTCAGGTCTGGTCAAAGTCTaGCTTCCTTTGGACGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: TVMIPKEKSNRWYAHAGSGLVKV*LPLDVF Trigger: AAATACGTCCAAAGGAAGTCAGACTTTGACCAGACC...TGAACCAGCATGAGCATACCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR GCA 90 bp | TATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAAAGGTCTGGGGGATATTTaGTGGGATAATTGGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: YAHAGSHEYKTSPNAPSKGLGDI*WDNWET Trigger: CGTCTCCCAATTATCCCAGCAAATATCCCCCAGACC...TTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR GCA 90 bp | CTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAAATGACGGCAGAAGAATGTGTTaGCTTCACAGGGAGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LMLVHMNTKLLQMLQANDGRRMC*LHREVL Trigger: AAGAACCTCCCTGTGAAGGCAACACATTCTTCTGCC...GTCATTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR TCA 90 bp | CGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGTAGTTGTGTTTCATaGCCAGGATGTTCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RWYAHAGSHEYKTSPNAPSSCVS*PGCSFC Trigger: ACAGAAGGAACATCCTGGTCATGAAACACAACTACT...TGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATTGTTCCTTTCTTGGTTaGTCCAGAAGAATGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYCSFLG*SRRMED Trigger: ATCCTCCATTCTTCTGGAGCAACCAAGAAAGGAACA...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR GCA 90 bp | TATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAAAGTCCACGTTCCACACTaGACTGACTTCTGTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YAHAGSHEYKTSPNAPSKVHVPH*TDFCVS Trigger: AGAAACACAGAAGTCAGTGCAGTGTGGAACGTGGAC...TTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR GCA 90 bp | AGCAACCGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATCAAAGTAAAGTTCAATaGACTGCCTTGGGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNRWYAHAGSHEYKTSPNQSKVQ*TALGQL Trigger: AAGCTGCCCCAAGGCAGTGCATTGAACTTTACTTTG...ATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCGGTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR GCA 90 bp | GAATGTGCTGGCTGCACAACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGCAATATGATCAAATTTaGACTCCCAAGATGGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ECAGCTTVMIPKEKSNRWQYDQI*TPKMVR Trigger: TCGAACCATCTTGGGAGTGCAAATTTGATCATATTG...CCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGTTGTGCAGCCAGCACATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR CCA 90 bp | GGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAGAACCTTCCAATTATTaGAGAAAAGCCAAAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GMLMLVHMNTKLLQMLQAEPSNY*RKAKGS Trigger: GGACCCTTTGGCTTTTCTCCAATAATTGGAAGGTTC...TGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR TCA 90 bp | CTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAAATGACAGTAGTTGTGTTTCATaGCCAGGATGTTCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMLVHMNTKLLQMLQANDSSCVS*PGCSFC Trigger: ACAGAAGGAACATCCTGGTCATGAAACACAACTACT...GTCATTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| CDS-3UTR CCA 90 bp | TTAACAGAGTTATATTTGCACATTGGTGGAAAACACTGTAGTAGTCAGCTCGGTCTCAAACTCACACGCTaGCAATGGTTTCAAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTELYLHIGGKHCSSQLGLKLTR*QWFQNS Trigger: GGAGTTTTGAAACCATTGCCAGCGTGTGAGTTTGAG...ACCGAGCTGACTACTACAGTGTTTTCCACCAATGTGCAAATATAACTCTGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | TATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAAACCTTCAGAATCTGTATaGACTCCACAATTCCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YAHAGSHEYKTSPNAPSKPSESV*TPQFLP Trigger: CGGAAGGAATTGTGGAGTCCATACAGATTCTGAAGG...TTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | TTAACAGAGTTATATTTGCACATTGGTGGAAAACACTGTAGTAGTCAGCTCGGTTCCTGGAAAACGGTCTaGTCAAAGTCTGACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTELYLHIGGKHCSSQLGSWKTV*SKSDFL Trigger: AAGGAAGTCAGACTTTGACCAGACCGTTTTCCAGGA...ACCGAGCTGACTACTACAGTGTTTTCCACCAATGTGCAAATATAACTCTGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR TCA 90 bp | TATAGGGCTCATCTGGTTCTCCTAAGAAAATGCTATTCTCATATTTCAACTTCTAGTTGGGATCCACAGTaGTGGTCATGGATGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YRAHLVLLRKCYSHISTSSWDPQ*WSWMHL Trigger: CAAATGCATCCATGACCATCACTGTGGATCCCAACT...AGAAGTTGAAATATGAGAATAGCATTTTCTTAGGAGAACCAGATGAGCCCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CCA 90 bp | TATAGGGCTCATCTGGTTCTCCTAAGAAAATGCTATTCTCATATTTCAACTTCTCTCACACGCTGGCAATaGTTTCAAAACTCCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YRAHLVLLRKCYSHISTSLTRWQ*FQNSKV Trigger: GACCTTGGAGTTTTGAAACCATTGCCAGCGTGTGAG...AGAAGTTGAAATATGAGAATAGCATTTTCTTAGGAGAACCAGATGAGCCCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| 3UTR CAA 72 bp | TCCTGTCCGTGTGCTGCAAGTACCCCACAAAGTACCTaGATAATGTTTCCAATATTCAAGAATTGCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SCPCAASTPQST*IMFPIFKNCCI Trigger: AATACAGCAATTCTTGAATATTGGAAACATTATCAAGGTACTTTGTGGGGTACTTGCAGCACACGGACAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| 3UTR CAA 72 bp | AAATCAAGAATTAGACATCAGAACATCAACCTTGTGTaGAGCAATTGCACTGCCCTTGGACAGAATTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSRIRHQNINLV*SNCTALGQNCK Trigger: TTTGCAATTCTGTCCAAGGGCAGTGCAATTGCTCAACACAAGGTTGATGTTCTGATGTCTAATTCTTGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| 3UTR CAA 72 bp | CTAATTACTCTAAACACAAATATTTCCTTGCACGTGTaGGCAATGGTCTCTTTCTCTGTCTTCTTAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LITLNTNISLHV*AMVSFSVFLGS Trigger: GCTTCCTAAGAAGACAGAGAAAGAGACCATTGCCAACACGTGCAAGGAAATATTTGTGTTTAGAGTAATTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| 3UTR CAA 72 bp | AAACTTCTCCAAATGCTCCAAGCAAATGACAGAAGCTaGATGAAGCTTGCTTTTGCATTTGTTTCCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLLQMLQANDRS*MKLAFAFVSLN Trigger: ATTCAAGGAAACAAATGCAAAAGCAAGCTTCATCAAGCTTCTGTCATTTGCTTGGAGCATTTGGAGAAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235167.2 |
||
| CDS-3UTR CCA 90 bp | TATAGGGCTCATCTGGTTCTCCTAAGAAAATGCTATTCTCATATTTCAACTTCTATACACATGTTACTGTaGCAGAAGAATGTGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRAHLVLLRKCYSHISTSIHMLL*QKNVLP Trigger: AGGCAACACATTCTTCTGCCACAGTAACATGTGTAT...AGAAGTTGAAATATGAGAATAGCATTTTCTTAGGAGAACCAGATGAGCCCTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS GCA 90 bp | GGATGTGAAGAGCATCTGAAACCTGCTGTTACGGCTACCCTCGTCTaGCCACATGCGGATCACCCCAAGGCCTGTGCGCAGCATGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: GCEEHLKPAVTATLV*PHADHPKACAQHDV Trigger: GACGTCATGCTGCGCACAGGCCTTGGGGTGATCCGCATGTGGGCAGACGAGGGTAGCCGTAACAGCAGGTTTCAGATGCTCTTCACATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 90 bp | ACCGCTGGACAGATTTTTCGTGTCTGGATAGCCTGTGGCTTGTGGTaGGCACCTCCTCAATCTCGTCGATGTCACAGGCATCGGCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TAGQIFRVWIACGLW*APPQSRRCHRHRRH Trigger: ATGCCGCCGATGCCTGTGACATCGACGAGATTGAGGAGGTGCCCACCACAAGCCACAGGCTATCCAGACACGAAAAATCTGTCCAGCGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS CCA 90 bp | AGAACCGCTGGACAGATTTTTCGTGTCTGGATAGCCTGTGGCTTGTaGTGGGCACCTCCTCAATCTCGTCGATGTCACAGGCATCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RTAGQIFRVWIACGL*WAPPQSRRCHRHRR Trigger: CCGCCGATGCCTGTGACATCGACGAGATTGAGGAGGTGCCCACCACAAGCCACAGGCTATCCAGACACGAAAAATCTGTCCAGCGGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS TCA 90 bp | AGTCTTCCGCCACGTCTGCAAAGTCGGCTGTTGCTCCAGTTCCTCTaGGCGTACATAACTCATAGTGGGGAGGCTCAAACACCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLPPRLQSRLLLQFL*AYITHSGEAQTPPG Trigger: TCCAGGAGGTGTTTGAGCCTCCCCACTATGAGTTATGTACGCTCAGAGGAACTGGAGCAACAGCCGACTTTGCAGACGTGGCGGAAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 90 bp | CCACGGCTTCACTGGCAGAAGCTTTGCCTTCCTTCAGAATCTGTATaGACTCCACAATTCCTTCCGGGCCGCCCATCTCAAACTCACACG | + |
|
Preference number: 5 (lower is better) Translates to: PRLHWQKLCLPSESV*TPQFLPGRPSQTHT Trigger: CGTGTGAGTTTGAGATGGGCGGCCCGGAAGGAATTGTGGAGTCCATACAGATTCTGAAGGAAGGCAAAGCTTCTGCCAGTGAAGCCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 90 bp | ATGAGGCAGAACCGCTGGACAGATTTTTCGTGTCTGGATAGCCTGTaGCTTGTGGTGGGCACCTCCTCAATCTCGTCGATGTCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MRQNRWTDFSCLDSL*LVVGTSSISSMSQA Trigger: TGCCTGTGACATCGACGAGATTGAGGAGGTGCCCACCACAAGCCACAGGCTATCCAGACACGAAAAATCTGTCCAGCGGTTCTGCCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS TCA 90 bp | CACCTCCTCAATCTCGTCGATGTCACAGGCATCGGCGGCATCTTGTaGGTAGTTGTGTTTCATGACCAGGATGTTCCTTCTGTTCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: HLLNLVDVTGIGGIL*VVVFHDQDVPSVHG Trigger: CCCGTGAACAGAAGGAACATCCTGGTCATGAAACACAACTACTCACAAGATGCCGCCGATGCCTGTGACATCGACGAGATTGAGGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS CCA 90 bp | GCACTGCCTTGGGGCAGCTTCTATGATGTAGACACACTCTCGGTCTaGGGGATATTTGCTGGGATAATTGGGAGACGTAAAGACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALPWGSFYDVDTLSV*GIFAGIIGRRKDTS Trigger: GGAGGTGTCTTTACGTCTCCCAATTATCCCAGCAAATATCCCCCAGACCGAGAGTGTGTCTACATCATAGAAGCTGCCCCAAGGCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS GCA 90 bp | CTCGGATGTACCATTTGCAATCCACGGCTTCACTGGCAGAAGCTTTaGCTTCCTTCAGAATCTGTATGGACTCCACAATTCCTTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGCTICNPRLHWQKL*LPSESVWTPQFLPG Trigger: GCCCGGAAGGAATTGTGGAGTCCATACAGATTCTGAAGGAAGGCAAAGCTTCTGCCAGTGAAGCCGTGGATTGCAAATGGTACATCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 90 bp | ATCGTGGTGGGGCTCGGATGTACCATTTGCAATCCACGGCTTCACTaGCAGAAGCTTTGCCTTCCTTCAGAATCTGTATGGACTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: IVVGLGCTICNPRLH*QKLCLPSESVWTPQ Trigger: TTGTGGAGTCCATACAGATTCTGAAGGAAGGCAAAGCTTCTGCCAGTGAAGCCGTGGATTGCAAATGGTACATCCGAGCCCCACCACGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR CAA 90 bp | TGGACACATCATTGTGCAGCAGCAGGGAGTCTTGCCGAAGGAATAACACATGTCTGGCAGAAGAATGTGTaGCCTTCACAGGGAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WTHHCAAAGSLAEGITHVWQKNV*PSQGGS Trigger: AGAACCTCCCTGTGAAGGCAACACATTCTTCTGCCA...GACATGTGTTATTCCTTCGGCAAGACTCCCTGCTGCTGCACAATGATGTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR CAA 90 bp | ACAACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGTATGCTCATGCTGGTGGTGGGATGAGGGGCTaGACTGGCTGTGTGGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: TTVMIPKEKSNRWYAHAGGGMRG*TGCVGI Trigger: GATACCCACACAGCCAGTCAAGCCCCTCATCCCACC...ACCAGCATGAGCATACCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS GCA 90 bp | AACGTAAGTAAATCTTGGATCGTGGTGGGGCTCGGATGTACCATTTaGAATCCACGGCTTCACTGGCAGAAGCTTTGCCTTCCTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NVSKSWIVVGLGCTI*NPRLHWQKLCLPSE Trigger: TTCTGAAGGAAGGCAAAGCTTCTGCCAGTGAAGCCGTGGATTGCAAATGGTACATCCGAGCCCCACCACGATCCAAGATTTACTTACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS GCA 90 bp | GACGTAAAGACACCTCCCTCTGCATGCTTTGTCCACGTTCCACACTaGACTGACTTCTGTGTTTCTGGGGTGATTTGTTTTTCTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DVKTPPSACFVHVPH*TDFCVSGVICFSVP Trigger: AGGAACAGAAAAACAAATCACCCCAGAAACACAGAAGTCAGTGCAGTGTGGAACGTGGACAAAGCATGCAGAGGGAGGTGTCTTTACGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | ACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGTATGCTCATGCTGGTTCACTCCCTCTGCATGCTTaGTCCACGTTCCACACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVMIPKEKSNRWYAHAGSLPLHA*STFHTA Trigger: TGCAGTGTGGAACGTGGACAAAGCATGCAGAGGGAG...TGAACCAGCATGAGCATACCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATTTTCGCGCTGGACAGTaGGGATCCACAGTGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYFRAGQ*GSTVMV Trigger: GACCATCACTGTGGATCCCAACTGTCCAGCGCGAAA...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | GGCAAGACATACTCTGGCCCCTCCAACCATCTGTTACCTTTATTGTCTTATTATGCTCGGATGTACCATTaGCAATCCACGGCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GKTYSGPSNHLLPLLSYYARMYH*QSTASL Trigger: CAGTGAAGCCGTGGATTGCAAATGGTACATCCGAGC...ATAATAAGACAATAAAGGTAACAGATGGTTGGAGGGGCCAGAGTATGTCTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS TCA 90 bp | AAAGACACCTCCCTCTGCATGCTTTGTCCACGTTCCACACTGCACTaGCTTCTGTGTTTCTGGGGTGATTTGTTTTTCTGTTCCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KDTSLCMLCPRSTLH*LLCFWGDLFFCSFL Trigger: AAGAAAGGAACAGAAAAACAAATCACCCCAGAAACACAGAAGTCAGTGCAGTGTGGAACGTGGACAAAGCATGCAGAGGGAGGTGTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS GCA 90 bp | CCTCCACGGAGCTGCTTCCGTCATAGACCGCCACAAAGTTTCTTTTaGACTCATTTGAATTCTGCATCTCATAGTCCAAGAAACGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPRSCFRHRPPQSFF*THLNSASHSPRNVS Trigger: ACTTACGTTTCTTGGACTATGAGATGCAGAATTCAAATGAGTGCAAAAGAAACTTTGTGGCGGTCTATGACGGAAGCAGCTCCGTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS CCA 90 bp | TCGCGCTGGACAGTTGGGATCCACAGTGATGGTCATGGATGCATTTaGAAGATGATCTCCTCAGTTTATGGTAATTTTCAAAGTCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRWTVGIHSDGHGCI*KMISSVYGNFQSLP Trigger: CGGAAGACTTTGAAAATTACCATAAACTGAGGAGATCATCTTCCAAATGCATCCATGACCATCACTGTGGATCCCAACTGTCCAGCGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | TGGACACATCATTGTGCAGCAGCAGGGAGTCTTGCCGAAGGAATAACACATGTCTTGCAGACTAGCGTGTaGTTAATACACATGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: WTHHCAAAGSLAEGITHVLQTSV*LIHMLL Trigger: CAGTAACATGTGTATTAACAACACGCTAGTCTGCAA...GACATGTGTTATTCCTTCGGCAAGACTCCCTGCTGCTGCACAATGATGTGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS GCA 90 bp | TGCCTTTCGCGCTGGACAGTTGGGATCCACAGTGATGGTCATGGATaGATTTGGAAGATGATCTCCTCAGTTTATGGTAATTTTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CLSRWTVGIHSDGHG*IWKMISSVYGNFQS Trigger: ACTTTGAAAATTACCATAAACTGAGGAGATCATCTTCCAAATGCATCCATGACCATCACTGTGGATCCCAACTGTCCAGCGCGAAAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | TATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCAAGCAAAACTGTGCTGCAGAACTaGGCCTTCAAATCCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: YAHAGSHEYKTSPNAPSKTVLQN*AFKSST Trigger: CGTGGAGGATTTGAAGGCCAAGTTCTGCAGCACAGT...TTTGCTTGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | ACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGTATGCTCATGCTGGTTCATACAGGTGGATTCTGTaGTCCACAGAACCTTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TVMIPKEKSNRWYAHAGSYRWIL*STEPSN Trigger: ATTGGAAGGTTCTGTGGACAACAGAATCCACCTGTA...TGAACCAGCATGAGCATACCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | AGCAACCGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATTCACTGGCAGAAGCTTaGCCTTCCTTCAGAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SNRWYAHAGSHEYKTSPNSLAEA*PSFRIC Trigger: ACAGATTCTGAAGGAAGGCAAAGCTTCTGCCAGTGA...ATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCGGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | GAATGTGCTGGCTGCACAACTGTAATGATTCCCAAAGAGAAAAGCAACCGATGGTTTTTACGAGGCTGTTaGATCTGTACAATGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ECAGCTTVMIPKEKSNRWFLRGC*ICTMTE Trigger: TTCTGTCATTGTACAGATCAAACAGCCTCGTAAAAA...CCATCGGTTGCTTTTCTCTTTGGGAATCATTACAGTTGTGCAGCCAGCACATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | ACAAAACTTCTCCAAATGCTCCAAGCAAATGACAGAAGCTTGATGAAGCTTGCTTGGTCATGGATGCATTaGGAAGATGATCTCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TKLLQMLQANDRSLMKLAWSWMH*EDDLLS Trigger: ACTGAGGAGATCATCTTCCAAATGCATCCATGACCA...AGCAAGCTTCATCAAGCTTCTGTCATTTGCTTGGAGCATTTGGAGAAGTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | CGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCATATTCAGATTCATGTTaGCTTAGAGACCCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWYAHAGSHEYKTSPNAPYSDSC*LRDPMR Trigger: CCTCATTGGGTCTCTAAGCAAACATGAATCTGAATA...TGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| CDS-3UTR CAA 90 bp | CGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATGCTCCATGTTTCTGGGGTGATTaGTTTTTCTGTTCCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RWYAHAGSHEYKTSPNAPCFWGD*FFCSFL Trigger: AAGAAAGGAACAGAAAAACAAATCACCCCAGAAACA...TGGAGCATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS-3UTR CAA 90 bp | AGCAACCGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATTATTCAGATTCATGTTaGCTTAGAGACCCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNRWYAHAGSHEYKTSPNYSDSC*LRDPMR Trigger: CCTCATTGGGTCTCTAAGCAAACATGAATCTGAATA...ATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCGGTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS TCA 90 bp | TCGAACTTCAATATGATCAAATTTGCACTCCCAAGATGGTTCGATTaGGTATTTTTCATCAAAGTAAAGTTCAATGCACTGCCTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SNFNMIKFALPRWFD*VFFIKVKFNALPWG Trigger: GCCCCAAGGCAGTGCATTGAACTTTACTTTGATGAAAAATACTCAATCGAACCATCTTGGGAGTGCAAATTTGATCATATTGAAGTTCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR CAA 90 bp | AGCAACCGATGGTATGCTCATGCTGGTTCACATGAATACAAAACTTCTCCAAATCCCAAGATGGTTCGATaGAGTATTTTTCATCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SNRWYAHAGSHEYKTSPNPKMVR*SIFHQS Trigger: ACTTTGATGAAAAATACTCAATCGAACCATCTTGGG...ATTTGGAGAAGTTTTGTATTCATGTGAACCAGCATGAGCATACCATCGGTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS-3UTR CAA 90 bp | TATAGGGCTCATCTGGTTCTCCTAAGAAAATGCTATTCTCATATTTCAACTTCTTTCACAGGGAGGTTCTaGAAAGGATGTGAAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: YRAHLVLLRKCYSHISTSFTGRF*KGCEEH Trigger: ATGCTCTTCACATCCTTTCAAGAACCTCCCTGTGAA...AGAAGTTGAAATATGAGAATAGCATTTTCTTAGGAGAACCAGATGAGCCCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS GCA 72 bp | GAGCATCTGAAACCTGCTGTTACGGCTACCCTCGTCTaGCCACATGCGGATCACCCCAAGGCCTGTGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EHLKPAVTATLV*PHADHPKACAQ Trigger: CTGCGCACAGGCCTTGGGGTGATCCGCATGTGGGCAGACGAGGGTAGCCGTAACAGCAGGTTTCAGATGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CAA 90 bp | GGCAGAACCGCTGGACAGATTTTTCGTGTCTGGATAGCCTGTGGCTaGTGGTGGGCACCTCCTCAATCTCGTCGATGTCACAGGCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: GRTAGQIFRVWIACG*WWAPPQSRRCHRHR Trigger: CCGATGCCTGTGACATCGACGAGATTGAGGAGGTGCCCACCACAAGCCACAGGCTATCCAGACACGAAAAATCTGTCCAGCGGTTCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| CDS CAA 72 bp | CGCAGCATGACGTCATTAGCCACTGTGCTGCAGAACTaGGCCTTCAAATCCTCCACGGAGCTGCTTCCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSMTSLATVLQN*AFKSSTELLPS Trigger: TGACGGAAGCAGCTCCGTGGAGGATTTGAAGGCCAAGTTCTGCAGCACAGTGGCTAATGACGTCATGCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS CCA 72 bp | GTGTTTCATGACCAGGATGTTCCTTCTGTTCACGGGTaGGATGAGGGGCTTGACTGGCTGTGTGGGTATCTC | + |
|
Preference number: 6 (lower is better) Translates to: VFHDQDVPSVHG*DEGLDWLCGYL Trigger: GAGATACCCACACAGCCAGTCAAGCCCCTCATCCCACCCGTGAACAGAAGGAACATCCTGGTCATGAAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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| CDS CCA 72 bp | GGACAGATTTTTCGTGTCTGGATAGCCTGTGGCTTGTaGTGGGCACCTCCTCAATCTCGTCGATGTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQIFRVWIACGL*WAPPQSRRCHR Trigger: CCTGTGACATCGACGAGATTGAGGAGGTGCCCACCACAAGCCACAGGCTATCCAGACACGAAAAATCTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS CCA 72 bp | AACCGCTGGACAGATTTTTCGTGTCTGGATAGCCTGTaGCTTGTGGTGGGCACCTCCTCAATCTCGTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: NRWTDFSCLDSL*LVVGTSSISSM Trigger: CATCGACGAGATTGAGGAGGTGCCCACCACAAGCCACAGGCTATCCAGACACGAAAAATCTGTCCAGCGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
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| CDS CAA 72 bp | GCTGGACAGATTTTTCGTGTCTGGATAGCCTGTGGCTaGTGGTGGGCACCTCCTCAATCTCGTCGATGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGQIFRVWIACG*WWAPPQSRRCH Trigger: GTGACATCGACGAGATTGAGGAGGTGCCCACCACAAGCCACAGGCTATCCAGACACGAAAAATCTGTCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS TCA 72 bp | GTCACGCCAATGACCGTCCCACTGGTGTTGGTCAGCTaGTCCAGCAGGCTGGTTTTCCTCTTTTCTTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: VTPMTVPLVLVS*SSRLVFLFSLQ Trigger: CTGTAAAGAAAAGAGGAAAACCAGCCTGCTGGATCAGCTGACCAACACCAGTGGGACGGTCATTGGCGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS TCA 72 bp | CCACGTCTGCAAAGTCGGCTGTTGCTCCAGTTCCTCTaGGCGTACATAACTCATAGTGGGGAGGCTCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PRLQSRLLLQFL*AYITHSGEAQT Trigger: TGTTTGAGCCTCCCCACTATGAGTTATGTACGCTCAGAGGAACTGGAGCAACAGCCGACTTTGCAGACGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 72 bp | TTCCGGGCCGCCCATCTCAAACTCACACGCTGGCAATaGTTTCAAAACTCCAAGGTCCTTAAAGTCGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FRAAHLKLTRWQ*FQNSKVLKVGI Trigger: GATCCCGACTTTAAGGACCTTGGAGTTTTGAAACCATTGCCAGCGTGTGAGTTTGAGATGGGCGGCCCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 72 bp | CACTGGCAGAAGCTTTGCCTTCCTTCAGAATCTGTATaGACTCCACAATTCCTTCCGGGCCGCCCATCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: HWQKLCLPSESV*TPQFLPGRPSQ Trigger: TTGAGATGGGCGGCCCGGAAGGAATTGTGGAGTCCATACAGATTCTGAAGGAAGGCAAAGCTTCTGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 72 bp | CAGATTTTTCGTGTCTGGATAGCCTGTGGCTTGTGGTaGGCACCTCCTCAATCTCGTCGATGTCACAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QIFRVWIACGLW*APPQSRRCHRH Trigger: ATGCCTGTGACATCGACGAGATTGAGGAGGTGCCCACCACAAGCCACAGGCTATCCAGACACGAAAAATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS GCA 72 bp | AAATCTTGGATCGTGGTGGGGCTCGGATGTACCATTTaGAATCCACGGCTTCACTGGCAGAAGCTTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KSWIVVGLGCTI*NPRLHWQKLCL Trigger: AAGGCAAAGCTTCTGCCAGTGAAGCCGTGGATTGCAAATGGTACATCCGAGCCCCACCACGATCCAAGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 72 bp | GGGCTCGGATGTACCATTTGCAATCCACGGCTTCACTaGCAGAAGCTTTGCCTTCCTTCAGAATCTGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: GLGCTICNPRLH*QKLCLPSESVW Trigger: CCATACAGATTCTGAAGGAAGGCAAAGCTTCTGCCAGTGAAGCCGTGGATTGCAAATGGTACATCCGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS TCA 72 bp | AATCTCGTCGATGTCACAGGCATCGGCGGCATCTTGTaGGTAGTTGTGTTTCATGACCAGGATGTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NLVDVTGIGGIL*VVVFHDQDVPS Trigger: AGAAGGAACATCCTGGTCATGAAACACAACTACTCACAAGATGCCGCCGATGCCTGTGACATCGACGAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058829.4 ENSMUST00000235167.2 |
||
| CDS GCA 72 bp | ACACCTCCCTCTGCATGCTTTGTCCACGTTCCACACTaGACTGACTTCTGTGTTTCTGGGGTGATTTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TPPSACFVHVPH*TDFCVSGVICF Trigger: AAAACAAATCACCCCAGAAACACAGAAGTCAGTGCAGTGTGGAACGTGGACAAAGCATGCAGAGGGAGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS GCA 72 bp | CAGTTTATGGTAATTTTCAAAGTCTTCCGCCACGTCTaGAAAGTCGGCTGTTGCTCCAGTTCCTCTGAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: QFMVIFKVFRHV*KVGCCSSSSER Trigger: ACGCTCAGAGGAACTGGAGCAACAGCCGACTTTGCAGACGTGGCGGAAGACTTTGAAAATTACCATAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 72 bp | TGGGGCAGCTTCTATGATGTAGACACACTCTCGGTCTaGGGGATATTTGCTGGGATAATTGGGAGACGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: WGSFYDVDTLSV*GIFAGIIGRRK Trigger: TTTACGTCTCCCAATTATCCCAGCAAATATCCCCCAGACCGAGAGTGTGTCTACATCATAGAAGCTGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS GCA 72 bp | ACCATTTGCAATCCACGGCTTCACTGGCAGAAGCTTTaGCTTCCTTCAGAATCTGTATGGACTCCACAATTC | + |
|
Preference number: 6 (lower is better) Translates to: TICNPRLHWQKL*LPSESVWTPQF Trigger: GAATTGTGGAGTCCATACAGATTCTGAAGGAAGGCAAAGCTTCTGCCAGTGAAGCCGTGGATTGCAAATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CAA 90 bp | TCCCAGGGATATACACAGTTCTGGAGCCCATTGCAGACTAGCGTGTaGTTAATACACATGTTACTGTGGCAGAAGAATGTGTTGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQGYTQFWSPLQTSV*LIHMLLWQKNVLPS Trigger: TGAAGGCAACACATTCTTCTGCCACAGTAACATGTGTATTAACAACACGCTAGTCTGCAATGGGCTCCAGAACTGTGTATATCCCTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CAA 72 bp | TACCATTTGCAATCCACGGCTTCACTGGCAGAAGCTTaGCCTTCCTTCAGAATCTGTATGGACTCCACAATT | + |
|
Preference number: 6 (lower is better) Translates to: YHLQSTASLAEA*PSFRICMDSTI Trigger: AATTGTGGAGTCCATACAGATTCTGAAGGAAGGCAAAGCTTCTGCCAGTGAAGCCGTGGATTGCAAATGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS TCA 72 bp | CTTAAAGTCGGGATCAGGTGTGAAATTATATCGAGCTaGAAATCCCATAGACTCCAGCTCGCCATCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LKVGIRCEIISS*KSHRLQLAISK Trigger: TTTGCTGATGGCGAGCTGGAGTCTATGGGATTTTCAGCTCGATATAATTTCACACCTGATCCCGACTTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 72 bp | TTGCAGACTAGCGTGTTGTTAATACACATGTTACTGTaGCAGAAGAATGTGTTGCCTTCACAGGGAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQTSVLLIHMLL*QKNVLPSQGGS Trigger: AGAACCTCCCTGTGAAGGCAACACATTCTTCTGCCACAGTAACATGTGTATTAACAACACGCTAGTCTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CCA 72 bp | GTATTTTTCATCAAAGTAAAGTTCAATGCACTGCCTTaGGGCAGCTTCTATGATGTAGACACACTCTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VFFIKVKFNALP*GSFYDVDTLSV Trigger: GACCGAGAGTGTGTCTACATCATAGAAGCTGCCCCAAGGCAGTGCATTGAACTTTACTTTGATGAAAAATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CAA 72 bp | TATACACAGTTCTGGAGCCCATTGCAGACTAGCGTGTaGTTAATACACATGTTACTGTGGCAGAAGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: YTQFWSPLQTSV*LIHMLLWQKNV Trigger: CACATTCTTCTGCCACAGTAACATGTGTATTAACAACACGCTAGTCTGCAATGGGCTCCAGAACTGTGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CAA 90 bp | AATCCACAGAAATCTTCCACTAGATTTTATTACAGGTGGATTCTGTaGTCCACAGAACCTTCCAATTATTGGAGAAAAGCCAAAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: NPQKSSTRFYYRWIL*STEPSNYWRKAKGS Trigger: GGACCCTTTGGCTTTTCTCCAATAATTGGAAGGTTCTGTGGACAACAGAATCCACCTGTAATAAAATCTAGTGGAAGATTTCTGTGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CAA 90 bp | CTCGAACTTCAATATGATCAAATTTGCACTCCCAAGATGGTTCGATaGAGTATTTTTCATCAAAGTAAAGTTCAATGCACTGCCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LELQYDQICTPKMVR*SIFHQSKVQCTALG Trigger: CCCCAAGGCAGTGCATTGAACTTTACTTTGATGAAAAATACTCAATCGAACCATCTTGGGAGTGCAAATTTGATCATATTGAAGTTCGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
||
| CDS CAA 72 bp | AAATCTTCCACTAGATTTTATTACAGGTGGATTCTGTaGTCCACAGAACCTTCCAATTATTGGAGAAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KSSTRFYYRWIL*STEPSNYWRKA Trigger: GGCTTTTCTCCAATAATTGGAAGGTTCTGTGGACAACAGAATCCACCTGTAATAAAATCTAGTGGAAGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058829.4 |
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