Pregenerated sensors for NEPRO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036208Ensembl transcript IDs: ENSMUST00000048788.14, ENSMUST00000123673.8, ENSMUST00000132610.2, ENSMUST00000147804.8
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGAAATGCCTTGCAGCAGCAGTCCAGCAAGCGCAGTAACAACTTaGAGCCTCCCAAAACCTTCATCAGCACCACCTCCACCACCGGCT | + |
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Preference number: 1 (lower is better) Translates to: TEMPCSSSPASAVTT*SLPKPSSAPPPPPA Trigger: AGCCGGTGGTGGAGGTGGTGCTGATGAAGGTTTTGGGAGGCTGCAAGTTGTTACTGCGCTTGCTGGACTGCTGCTGCAAGGCATTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
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| 3UTR CCA 90 bp | CAGTGTTCCCAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTaGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTACATCT | + |
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Preference number: 1 (lower is better) Translates to: QCSQSLATPLKGAEH*TSLLPARKFHVSTS Trigger: AGATGTACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTGGGAACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR GCA 90 bp | TTTGCTTTTGAACAAGATGTAGAACTCTCAGCTCCTTCTGCACCATaGCTGCCTGGATGCTGCCGTGCTCCTCCTACCTTGACGATAATG | + |
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Preference number: 1 (lower is better) Translates to: FAFEQDVELSAPSAP*LPGCCRAPPTLTIM Trigger: CATTATCGTCAAGGTAGGAGGAGCACGGCAGCATCCAGGCAGGCATGGTGCAGAAGGAGCTGAGAGTTCTACATCTTGTTCAAAAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR CCA 90 bp | CCCAATGGCTTTTCTTTTCTGGTCCTCTTACAGGCTTTCACTGGCTaGCCCAGGTCCACAGTGCTCTGTGGATTGCTTGTCATTTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: PNGFSFLVLLQAFTG*PRSTVLCGLLVICS Trigger: TGAACAAATGACAAGCAATCCACAGAGCACTGTGGACCTGGGCCAGCCAGTGAAAGCCTGTAAGAGGACCAGAAAAGAAAAGCCATTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR TCA 90 bp | CCACCTCCCTCCTTAGTGAGGAGCTTCCTTGACTCTTGGCAGAAGTaGAAAACGATGAGGTTAAACCAGACAGACCTGAGTCGCTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: PPPSLVRSFLDSWQK*KTMRLNQTDLSRFV Trigger: AACAAAGCGACTCAGGTCTGTCTGGTTTAACCTCATCGTTTTTCACTTCTGCCAAGAGTCAAGGAAGCTCCTCACTAAGGAGGGAGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR GCA 90 bp | GAGGATGCTCTGAAGTGCTGGTACGAGAGCCTCGGAGAAGGCAGTTaGAGAGAGATGTTTTCATGCACTGGAGCTTCTTTGTCAAACTAT | + |
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Preference number: 1 (lower is better) Translates to: EDALKCWYESLGEGS*REMFSCTGASLSNY Trigger: ATAGTTTGACAAAGAAGCTCCAGTGCATGAAAACATCTCTCTGCAACTGCCTTCTCCGAGGCTCTCGTACCAGCACTTCAGAGCATCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR TCA 90 bp | ACTCACCATGTGATTAGCTTACACAAGGCCGCTGTGAATGTTTATTaGCCTGAATGCACTCCTGTGGCAAACTGCACAGAAGCAGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: THHVISLHKAAVNVY*PECTPVANCTEAAL Trigger: GAGAGCTGCTTCTGTGCAGTTTGCCACAGGAGTGCATTCAGGTCAATAAACATTCACAGCGGCCTTGTGTAAGCTAATCACATGGTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048788.14 ENSMUST00000147804.8 |
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| 3UTR TCA 90 bp | ATGCTGCCGTGCTCCTCCTACCTTGACGATAATGGACTGAACCTCTaGACCTGTAAGGCAGCCCCAATTAAATGGTGTCCTTATAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: MLPCSSYLDDNGLNL*TCKAAPIKWCPYKS Trigger: ACTCTTATAAGGACACCATTTAATTGGGGCTGCCTTACAGGTTCAGAGGTTCAGTCCATTATCGTCAAGGTAGGAGGAGCACGGCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR GCA 90 bp | TGGTACGAGAGCCTCGGAGAAGGCAGTTGCAGAGAGATGTTTTCATaGACTGGAGCTTCTTTGTCAAACTATAGCCTTGAGATTCCACAT | + |
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Preference number: 1 (lower is better) Translates to: WYESLGEGSCREMFS*TGASLSNYSLEIPH Trigger: ATGTGGAATCTCAAGGCTATAGTTTGACAAAGAAGCTCCAGTGCATGAAAACATCTCTCTGCAACTGCCTTCTCCGAGGCTCTCGTACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR CCA 90 bp | TTGCTCCGGGACCACACAATTGCCATTTCAATTTCTTCAGAAAGTTaGGCGAACGTCTTGGTCTTTCGGATTCTTTGCACAGTATCGTTA | + |
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Preference number: 1 (lower is better) Translates to: LLRDHTIAISISSES*ANVLVFRILCTVSL Trigger: TAACGATACTGTGCAAAGAATCCGAAAGACCAAGACGTTCGCCCAACTTTCTGAAGAAATTGAAATGGCAATTGTGTGGTCCCGGAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| 3UTR GCA 90 bp | CTAACTGGACTAACTAGCACTATTAAAAAGCCACCTTCTTCATTCTaGAGCACACACCAAGTACTAAGAGTGCCATCAAGCAAACTCCAC | + |
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Preference number: 1 (lower is better) Translates to: LTGLTSTIKKPPSSF*STHQVLRVPSSKLH Trigger: GTGGAGTTTGCTTGATGGCACTCTTAGTACTTGGTGTGTGCTGCAGAATGAAGAAGGTGGCTTTTTAATAGTGCTAGTTAGTCCAGTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR CCA 90 bp | GGTCCACAGTGCTCTGTGGATTGCTTGTCATTTGTTCAGATGGTTTaGAAAGTCTATCTAAAGTGTCTTCATTCATCTTTGGTAGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: GPQCSVDCLSFVQMV*KVYLKCLHSSLVAA Trigger: AGCAGCTACCAAAGATGAATGAAGACACTTTAGATAGACTTTCCAAACCATCTGAACAAATGACAAGCAATCCACAGAGCACTGTGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR CAA 90 bp | AACAGAAATGCCTTGCAGCAGCAGTCCAGCAAGCGCAGTAACAACTaGCAGCCTCCCAAAACCTTCATCAGCACCACCTCCACCACCGGC | + |
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Preference number: 2 (lower is better) Translates to: NRNALQQQSSKRSNN*QPPKTFISTTSTTG Trigger: GCCGGTGGTGGAGGTGGTGCTGATGAAGGTTTTGGGAGGCTGCAAGTTGTTACTGCGCTTGCTGGACTGCTGCTGCAAGGCATTTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTATGCCTGCCTGGATGCTaGCGTGCTCCTCCTACCTTG | + |
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Preference number: 2 (lower is better) Translates to: KEQSTGPACYLLGSFTSVCLPGC*RAPPTL Trigger: CAAGGTAGGAGGAGCACGGCAGCATCCAGGCAGGCA...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR-3UTR TCA 90 bp | CACAGAAGCAGCTCTCAGGCTAAGCAGTGTTCCCAGAGCTTAGCAACACCCCTTAATGGACTGAACCTCTaGACCTGTAAGGCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: HRSSSQAKQCSQSLATPLNGLNL*TCKAAP Trigger: TGGGGCTGCCTTACAGGTTCAGAGGTTCAGTCCATT...AAGGGGTGTTGCTAAGCTCTGGGAACACTGCTTAGCCTGAGAGCTGCTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAGCAGCTCTCAGGCTAAGCAGTGTTCCCAGAGCTTAGCAACACCCCTTACTCCTGTGGCAAACTaGACAGAAGCAGCTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: HRSSSQAKQCSQSLATPLTPVAN*TEAALR Trigger: CCTGAGAGCTGCTTCTGTGCAGTTTGCCACAGGAGT...AAGGGGTGTTGCTAAGCTCTGGGAACACTGCTTAGCCTGAGAGCTGCTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048788.14 ENSMUST00000147804.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAATGGCTTTTCTTTTCTGGTCCTCTTACAGGCTTTCACTGGCTGGCCCAGGCCAGGTGACCCTTTATaGTGCTTTGCTACTCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: PNGFSFLVLLQAFTGWPRPGDPL*CFATPA Trigger: GGCTGGAGTAGCAAAGCACCATAAAGGGTCACCTGG...CCTGGGCCAGCCAGTGAAAGCCTGTAAGAGGACCAGAAAAGAAAAGCCATTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTATTCAAAAGGAAGACCTaGGCAGGAGATGGCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: KEQSTGPACYLLGSFTSVFKRKT*AGDGSA Trigger: GGCTGAGCCATCTCCTGCCCAGGTCTTCCTTTTGAA...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR-3UTR TCA 90 bp | AACTGTCCCAGAGCATCTCCTCTTAGCACTGCTGTCCCTAGTGTTCTTCAGAGTTCTGTAGCTCCAGGCTaGGTTGCACTACTTGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: NCPRASPLSTAVPSVLQSSVAPG*VALLGR Trigger: TCTGCCAAGTAGTGCAACTCAGCCTGGAGCTACAGA...ACTCTGAAGAACACTAGGGACAGCAGTGCTAAGAGGAGATGCTCTGGGACAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR-3UTR CCA 90 bp | CCAATGGCTTTTCTTTTCTGGTCCTCTTACAGGCTTTCACTGGCTGGCCCAGGTAAAGGAGCAGAGCACTaGACCAGCTTGTTACCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PMAFLFWSSYRLSLAGPGKGAEH*TSLLPA Trigger: AGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTT...ACCTGGGCCAGCCAGTGAAAGCCTGTAAGAGGACCAGAAAAGAAAAGCCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR CAA 90 bp | ATGAATTCCTTTAGCCCTAAGTGCTTCACAGTCAACAGAAATGCCTaGCAGCAGCAGTCCAGCAAGCGCAGTAACAACTTGCAGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: MNSFSPKCFTVNRNA*QQQSSKRSNNLQPP Trigger: GGGAGGCTGCAAGTTGTTACTGCGCTTGCTGGACTGCTGCTGCAAGGCATTTCTGTTGACTGTGAAGCACTTAGGGCTAAAGGAATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
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| 3UTR CAA 90 bp | CAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTGGACCAGCTaGTTACCTGCTCGGAAGTTTCACGTCAGTACATCTAAACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: QSLATPLKGAEHWTS*LPARKFHVSTSKLP Trigger: TGGGAGTTTAGATGTACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAAGTCCTTTATGGAGAACCCATAGCCTGCTCACCAGTCCAACCATCACATCTGTAGCTCCAGGCTaGGTTGCATTGGCAGACAAC | + |
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Preference number: 2 (lower is better) Translates to: LKSPLWRTHSLLTSPTITSVAPG*VALADN Trigger: GTTGTCTGCCAATGCAACTCAGCCTGGAGCTACAGA...TGTGATGGTTGGACTGGTGAGCAGGCTATGGGTTCTCCATAAAGGACTTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123673.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCAGGAATTACTCTCAGCTCCTTCTaGACCATGCCTGCCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: PDNLKSTCGDLNMLSPGITLSSF*TMPAWM Trigger: CATCCAGGCAGGCATGGTGCAGAAGGAGCTGAGAGT...AATTCCTGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR-3UTR TCA 90 bp | AAGACACCACTCCTGGAACCCATAGGTGGACAGAACCAACTCTCACAGGTTACCGCTGTGAATGTTTATTaGCCTGAATGCACTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: KTPLLEPIGGQNQLSQVTAVNVY*PECTPV Trigger: CACAGGAGTGCATTCAGGTCAATAAACATTCACAGC...GGTAACCTGTGAGAGTTGGTTCTGTCCACCTATGGGTTCCAGGAGTGGTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR-3UTR GCA 90 bp | CTCAAAAGTCCTTTATGGAGAACCCATAGCCTGCTCACCAGTCCAACCATCACACACAGTCAACAGAAATaGCTTGCAGCAGCAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LKSPLWRTHSLLTSPTITHSQQK*LAAAVQ Trigger: CTGGACTGCTGCTGCAAGGCATTTCTGTTGACTGTG...TGTGATGGTTGGACTGGTGAGCAGGCTATGGGTTCTCCATAAAGGACTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTATCCCCTGTTTGCTTTTaGACAAGATGTAGAACTCTC | + |
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Preference number: 2 (lower is better) Translates to: KEQSTGPACYLLGSFTSVSPVCF*TRCRTL Trigger: GAGAGTTCTACATCTTGTTCAAAAGCAAACAGGGGA...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR-3UTR CCA 90 bp | CCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCAGGAATTAAAGGAGCAGAGCACTaGACCAGCTTGTTACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PDNLKSTCGDLNMLSPGIKGAEH*TSLLPA Trigger: AGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTT...AATTCCTGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR CAA 90 bp | AATTTCTTCAGAAAGTTGGGCGAACGTCTTGGTCTTTCGGATTCTTaGCACAGTATCGTTAGCCCAGTGAGTTCTCAGTTGCTGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: NFFRKLGERLGLSDS*HSIVSPVSSQLLRG Trigger: CCCTCTCAGCAACTGAGAACTCACTGGGCTAACGATACTGTGCAAAGAATCCGAAAGACCAAGACGTTCGCCCAACTTTCTGAAGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| 3UTR CAA 90 bp | AGGCTTTCACTGGCTGGCCCAGGTCCACAGTGCTCTGTGGATTGCTaGTCATTTGTTCAGATGGTTTGGAAAGTCTATCTAAAGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RLSLAGPGPQCSVDC*SFVQMVWKVYLKCL Trigger: AAGACACTTTAGATAGACTTTCCAAACCATCTGAACAAATGACAAGCAATCCACAGAGCACTGTGGACCTGGGCCAGCCAGTGAAAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTTCTCAAAAGTCCTTTATGGAGAACCCATAGCCTGCTCACCAGTCCAACCATACACAAGGCCGCTGTaGATGTTTATTGACCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: AFSKVLYGEPIACSPVQPYTRPL*MFIDLN Trigger: ATTCAGGTCAATAAACATTCACAGCGGCCTTGTGTA...TGGTTGGACTGGTGAGCAGGCTATGGGTTCTCCATAAAGGACTTTTGAGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTATGGAGAACCCATAGCCTGCTCACCAGTCCAACCATCACAAGGTTCAAAAAGCGCAGTAACAACTTaGAGCCTCCCAAAACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LYGEPIACSPVQPSQGSKSAVTT*SLPKPS Trigger: TGAAGGTTTTGGGAGGCTGCAAGTTGTTACTGCGCT...TTTTGAACCTTGTGATGGTTGGACTGGTGAGCAGGCTATGGGTTCTCCATAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCCTTTATGGAGAACCCATAGCCTGCTCACCAGTCCAACCATCACAAGGTTCTCCTTTAGCCCTAAGTaGTTCACAGTCAACAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SPLWRTHSLLTSPTITRFSFSPK*FTVNRN Trigger: ATTTCTGTTGACTGTGAAGCACTTAGGGCTAAAGGA...GAACCTTGTGATGGTTGGACTGGTGAGCAGGCTATGGGTTCTCCATAAAGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGTCCCAGAGCATCTCCTCTTAGCACTGCTGTCCCTAGTGTTCTTCAGAGTAAGGTCAAATCCCAATaGCTTTTCTTTTCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NCPRASPLSTAVPSVLQSKVKSQ*LFFSGP Trigger: AGGACCAGAAAAGAAAAGCCATTGGGATTTGACCTT...ACTCTGAAGAACACTAGGGACAGCAGTGCTAAGAGGAGATGCTCTGGGACAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR CAA 90 bp | CTTTCGGATTCTTTGCACAGTATCGTTAGCCCAGTGAGTTCTCAGTaGCTGAGAGGGAAGTTTGGTTGTCTTCAGTTTGGACTGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: LSDSLHSIVSPVSSQ*LRGKFGCLQFGLRI Trigger: TATTCTCAGTCCAAACTGAAGACAACCAAACTTCCCTCTCAGCAACTGAGAACTCACTGGGCTAACGATACTGTGCAAAGAATCCGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| 3UTR CAA 90 bp | TTTGCTCCGGGACCACACAATTGCCATTTCAATTTCTTCAGAAAGTaGGGCGAACGTCTTGGTCTTTCGGATTCTTTGCACAGTATCGTT | + |
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Preference number: 2 (lower is better) Translates to: FAPGPHNCHFNFFRK*GERLGLSDSLHSIV Trigger: AACGATACTGTGCAAAGAATCCGAAAGACCAAGACGTTCGCCCAACTTTCTGAAGAAATTGAAATGGCAATTGTGTGGTCCCGGAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| 3UTR-3UTR TCA 90 bp | GCTATGCCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCATCACAGGTTACCCACTaGTATTCACATTCATGTAAG | + |
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Preference number: 2 (lower is better) Translates to: AMPDNLKSTCGDLNMLSPSQVTH*YSHSCK Trigger: CTTACATGAATGTGAATATCAGTGGGTAACCTGTGA...TGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGGCATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTCAGAAAGTTGGGCGAACGTCTTGGTCTTTCGGATTCTTTGCACAGTATGCTGAGAGGGAAGTTTaGTTGTCTTCAGTTTGGACT | + |
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Preference number: 2 (lower is better) Translates to: FLQKVGRTSWSFGFFAQYAEREV*LSSVWT Trigger: AGTCCAAACTGAAGACAACCAAACTTCCCTCTCAGC...ATACTGTGCAAAGAATCCGAAAGACCAAGACGTTCGCCCAACTTTCTGAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| 3UTR CAA 90 bp | AGGTCCACAGTGCTCTGTGGATTGCTTGTCATTTGTTCAGATGGTTaGGAAAGTCTATCTAAAGTGTCTTCATTCATCTTTGGTAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RSTVLCGLLVICSDG*ESLSKVSSFIFGSC Trigger: GCAGCTACCAAAGATGAATGAAGACACTTTAGATAGACTTTCCAAACCATCTGAACAAATGACAAGCAATCCACAGAGCACTGTGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTCAGAAAGTTGGGCGAACGTCTTGGTCTTTCGGATTCTTTGCACAGTATGTCTTCAGTTTGGACTaGGAATATTTAAAGTCACGG | + |
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Preference number: 2 (lower is better) Translates to: FLQKVGRTSWSFGFFAQYVFSLD*EYLKSR Trigger: CCGTGACTTTAAATATTCTCAGTCCAAACTGAAGAC...ATACTGTGCAAAGAATCCGAAAGACCAAGACGTTCGCCCAACTTTCTGAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| 3UTR-3UTR TCA 90 bp | AACTCTCACAGGTTACCCACTGATATTCACATTCATGTAAGTTACCCTCTGATATACACAAGGCCGCTGTaGATGTTTATTGACCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: NSHRLPTDIHIHVSYPLIYTRPL*MFIDLN Trigger: ATTCAGGTCAATAAACATTCACAGCGGCCTTGTGTA...TATCAGAGGGTAACTTACATGAATGTGAATATCAGTGGGTAACCTGTGAGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR CAA 90 bp | GAGAGATGTTTTCATGCACTGGAGCTTCTTTGTCAAACTATAGCCTaGAGATTCCACATGTCTAAACCTATTACTCTTAAGAAGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: ERCFHALELLCQTIA*RFHMSKPITLKKFV Trigger: AACAAACTTCTTAAGAGTAATAGGTTTAGACATGTGGAATCTCAAGGCTATAGTTTGACAAAGAAGCTCCAGTGCATGAAAACATCTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| 3UTR GCA 72 bp | AGCTCCTTCTGCACCATGCCTGCCTGGATGCTGCCGTaGTCCTCCTACCTTGACGATAATGGACTGAACCTC | + |
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Preference number: 3 (lower is better) Translates to: SSFCTMPAWMLP*SSYLDDNGLNL Trigger: GAGGTTCAGTCCATTATCGTCAAGGTAGGAGGAGCACGGCAGCATCCAGGCAGGCATGGTGCAGAAGGAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR TCA 72 bp | TGGCTGGGGACGACGCGGTTTTCTGTAGCTCCAGGCTaGGTTGCATTGGCAGACAACAACTGTGACAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: WLGTTRFSVAPG*VALADNNCDRS Trigger: AGACCTGTCACAGTTGTTGTCTGCCAATGCAACTCAGCCTGGAGCTACAGAAAACCGCGTCGTCCCCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123673.8 |
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| 3UTR GCA 72 bp | GAACAAGATGTAGAACTCTCAGCTCCTTCTGCACCATaGCTGCCTGGATGCTGCCGTGCTCCTCCTACCTTG | + |
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Preference number: 3 (lower is better) Translates to: EQDVELSAPSAP*LPGCCRAPPTL Trigger: CAAGGTAGGAGGAGCACGGCAGCATCCAGGCAGGCATGGTGCAGAAGGAGCTGAGAGTTCTACATCTTGTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR GCA 72 bp | CCTTGCAGCAGCAGTCCAGCAAGCGCAGTAACAACTTaGAGCCTCCCAAAACCTTCATCAGCACCACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PCSSSPASAVTT*SLPKPSSAPPP Trigger: TGGAGGTGGTGCTGATGAAGGTTTTGGGAGGCTGCAAGTTGTTACTGCGCTTGCTGGACTGCTGCTGCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
||
| 3UTR CCA 72 bp | TGTAGAACTCTCAGCTCCTTCTGCACCATGCCTGCCTaGATGCTGCCGTGCTCCTCCTACCTTGACGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: CRTLSSFCTMPA*MLPCSSYLDDN Trigger: ATTATCGTCAAGGTAGGAGGAGCACGGCAGCATCCAGGCAGGCATGGTGCAGAAGGAGCTGAGAGTTCTACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| 3UTR CCA 72 bp | CAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTaGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: QSLATPLKGAEH*TSLLPARKFHV Trigger: GACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048788.14 ENSMUST00000147804.8 |
||
| 3UTR CCA 72 bp | TGGCTTTTCTTTTCTGGTCCTCTTACAGGCTTTCACTaGCTGGCCCAGGTCCACAGTGCTCTGTGGATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: WLFFSGPLTGFH*LAQVHSALWIA Trigger: AGCAATCCACAGAGCACTGTGGACCTGGGCCAGCCAGTGAAAGCCTGTAAGAGGACCAGAAAAGAAAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAAGCAGCTCTCAGGCTAAGCAGTGTTCCCAGAGCTTAGCAACACCCCTTGCCTTGTCATGGTGTTaGTTCACAGCAGTAAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: HRSSSQAKQCSQSLATPLALSWC*FTAVKP Trigger: GGGTTTTACTGCTGTGAACAAACACCATGACAAGGC...AAGGGGTGTTGCTAAGCTCTGGGAACACTGCTTAGCCTGAGAGCTGCTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| 3UTR CCA 72 bp | AAGGGAGTGAGGTCAGTGAGGCCAGGTGACCCTTTATaGTGCTTTGCTACTCCAGCCTTGTTCTGTTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: KGVRSVRPGDPL*CFATPALFCLP Trigger: AGGTAAACAGAACAAGGCTGGAGTAGCAAAGCACCATAAAGGGTCACCTGGCCTCACTGACCTCACTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| 3UTR CCA 72 bp | GGCTTTCACTGGCTGGCCCAGGTCCACAGTGCTCTGTaGATTGCTTGTCATTTGTTCAGATGGTTTGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GFHWLAQVHSAL*IACHLFRWFGK Trigger: CTTTCCAAACCATCTGAACAAATGACAAGCAATCCACAGAGCACTGTGGACCTGGGCCAGCCAGTGAAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR CCA 72 bp | TTTTCTTTTCTGGTCCTCTTACAGGCTTTCACTGGCTaGCCCAGGTCCACAGTGCTCTGTGGATTGCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: FSFLVLLQAFTG*PRSTVLCGLLV Trigger: GACAAGCAATCCACAGAGCACTGTGGACCTGGGCCAGCCAGTGAAAGCCTGTAAGAGGACCAGAAAAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR TCA 72 bp | AAGACCTGCTTTCCATTAGGACAGACATCTGACCTCTaGACTGTCCCAGAGCATCTCCTCTTAGCACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KTCFPLGQTSDL*TVPEHLLLALL Trigger: CAGCAGTGCTAAGAGGAGATGCTCTGGGACAGTTCAGAGGTCAGATGTCTGTCCTAATGGAAAGCAGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR TCA 72 bp | TCTGGCGCATTGTGTGTGTGCATCTGTGTCTTCGCCTaGAAGCCAGATTCATTTCTACTGCCCCCTGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGALCVCICVFA*KPDSFLLPPVR Trigger: TCTTACAGGGGGCAGTAGAAATGAATCTGGCTTTCAGGCGAAGACACAGATGCACACACACAATGCGCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR GCA 72 bp | TCTTACAGGCTTTCACTGGCTGGCCCAGGTCCACAGTaGTCTGTGGATTGCTTGTCATTTGTTCAGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SYRLSLAGPGPQ*SVDCLSFVQMV Trigger: AACCATCTGAACAAATGACAAGCAATCCACAGAGCACTGTGGACCTGGGCCAGCCAGTGAAAGCCTGTAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCGAACGTCTTGGTCTTTCGGATTCTTTGCACAGTATCGTTAGCCCAGTGAGTGAGAGGGAAGTTTGGTaGTCTTCAGTTTGGACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GERLGLSDSLHSIVSPVSEREVW*SSVWTE Trigger: CTCAGTCCAAACTGAAGACAACCAAACTTCCCTCTC...ACTCACTGGGCTAACGATACTGTGCAAAGAATCCGAAAGACCAAGACGTTCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
||
| 3UTR TCA 72 bp | TGCTCCTCCTACCTTGACGATAATGGACTGAACCTCTaGACCTGTAAGGCAGCCCCAATTAAATGGTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CSSYLDDNGLNL*TCKAAPIKWCP Trigger: AGGACACCATTTAATTGGGGCTGCCTTACAGGTTCAGAGGTTCAGTCCATTATCGTCAAGGTAGGAGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTATTTGCTACTCCAGCCTaGTTCTGTTTACCTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KEQSTGPACYLLGSFTSVFATPA*FCLPSD Trigger: ATCTGAAGGTAAACAGAACAAGGCTGGAGTAGCAAA...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048788.14 ENSMUST00000147804.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGTCCCAGAGCATCTCCTCTTAGCACTGCTGTCCCTAGTGTTCTTCAGAGTCTTTGTTTCCAAGTCTaGTGCAAAAAGCCCGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NCPRASPLSTAVPSVLQSLCFQV*CKKPEG Trigger: ACCTTCGGGCTTTTTGCACAAGACTTGGAAACAAAG...ACTCTGAAGAACACTAGGGACAGCAGTGCTAAGAGGAGATGCTCTGGGACAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGTCCCAGAGCATCTCCTCTTAGCACTGCTGTCCCTAGTGTTCTTCAGAGTTTTGCTACTCCAGCCTaGTTCTGTTTACCTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NCPRASPLSTAVPSVLQSFATPA*FCLPSD Trigger: ATCTGAAGGTAAACAGAACAAGGCTGGAGTAGCAAA...ACTCTGAAGAACACTAGGGACAGCAGTGCTAAGAGGAGATGCTCTGGGACAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTATTTTTAGGTCAGGCTTaGCAAGTTTTCTCAAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: KEQSTGPACYLLGSFTSVFLGQA*QVFSRP Trigger: AGGTCTTGAGAAAACTTGCAAAGCCTGACCTAAAAA...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR TCA 72 bp | AAAACTTTAAAAGGGAGTGAGGTCAGTGAGGCCAGGTaGCCCTTTATGGTGCTTTGCTACTCCAGCCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KTLKGSEVSEAR*PFMVLCYSSLV Trigger: AACAAGGCTGGAGTAGCAAAGCACCATAAAGGGTCACCTGGCCTCACTGACCTCACTCCCTTTTAAAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| 3UTR TCA 72 bp | GCAAACTCCACCTCCCTCCTTAGTGAGGAGCTTCCTTaGCTCTTGGCAGAAGTGAAAAACGATGAGGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ANSTSLLSEELP*LLAEVKNDEVK Trigger: TTTAACCTCATCGTTTTTCACTTCTGCCAAGAGTCAAGGAAGCTCCTCACTAAGGAGGGAGGTGGAGTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR TCA 72 bp | TCCTTAGTGAGGAGCTTCCTTGACTCTTGGCAGAAGTaGAAAACGATGAGGTTAAACCAGACAGACCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLVRSFLDSWQK*KTMRLNQTDLS Trigger: ACTCAGGTCTGTCTGGTTTAACCTCATCGTTTTTCACTTCTGCCAAGAGTCAAGGAAGCTCCTCACTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR GCA 72 bp | AAAACTTTATACTTTGATCTTCTTTGTCTGGGAGGATaGTCTGAAGTGCTGGTACGAGAGCCTCGGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KTLYFDLLCLGG*SEVLVREPRRR Trigger: CCTTCTCCGAGGCTCTCGTACCAGCACTTCAGAGCATCCTCCCAGACAAAGAAGATCAAAGTATAAAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGCTTTTTGCTCCGGGACCACACAATTGCCATTTCAATTTCTTCAGAAAGTCTTTGTTTCCAAGTCTaGTGCAAAAAGCCCGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSFLLRDHTIAISISSESLCFQV*CKKPEG Trigger: ACCTTCGGGCTTTTTGCACAAGACTTGGAAACAAAG...ACTTTCTGAAGAAATTGAAATGGCAATTGTGTGGTCCCGGAGCAAAAAGCTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
||
| 3UTR TCA 72 bp | ATAGGTGGACAGAACCAACTCTCACAGGTTACCCACTaGTATTCACATTCATGTAAGTTACCCTCTGATATC | + |
|
Preference number: 3 (lower is better) Translates to: IGGQNQLSQVTH*YSHSCKLPSDI Trigger: GATATCAGAGGGTAACTTACATGAATGTGAATATCAGTGGGTAACCTGTGAGAGTTGGTTCTGTCCACCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| 3UTR TCA 72 bp | TTACTCTTAAGAAGTTTGTTGCCCAGAAAGGTAGCCTaGGTCTTGAGTAAAGAACTCCTGAATACACTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLLRSLLPRKVA*VLSKELLNTLH Trigger: GTGGAGTGTATTCAGGAGTTCTTTACTCAAGACTCAGGCTACCTTTCTGGGCAACAAACTTCTTAAGAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGATTCCACATGTCTAAACCTATTACTCTTAAGAAGTTTGTTGCCCAGAAAACAGTGCTCTGTGGATaGCTTGTCATTTGTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LRFHMSKPITLKKFVAQKTVLCG*LVICSD Trigger: ATCTGAACAAATGACAAGCAATCCACAGAGCACTGT...TTTCTGGGCAACAAACTTCTTAAGAGTAATAGGTTTAGACATGTGGAATCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| CDS-3UTR CCA 90 bp | CCAATGGCTTTTCTTTTCTGGTCCTCTTACAGGCTTTCACTGGCTGGCCCAGGTCTGCAGTTCCCCGCCTaGGGGATCCTCACGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PMAFLFWSSYRLSLAGPGLQFPA*GILTRF Trigger: GAACCGCGTGAGGATCCCCCAGGCGGGGAACTGCAG...ACCTGGGCCAGCCAGTGAAAGCCTGTAAGAGGACCAGAAAAGAAAAGCCATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTATGGAGAACCCATAGCCTGCTCACCAGTCCAACCATCACAAGGTTCACTGCAGTTCCCCGCCTaGGGGATCCTCACGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLYGEPIACSPVQPSQGSLQFPA*GILTRF Trigger: GAACCGCGTGAGGATCCCCCAGGCGGGGAACTGCAG...TGAACCTTGTGATGGTTGGACTGGTGAGCAGGCTATGGGTTCTCCATAAAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
||
| 3UTR CAA 72 bp | GCCTTGCAGCAGCAGTCCAGCAAGCGCAGTAACAACTaGCAGCCTCCCAAAACCTTCATCAGCACCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALQQQSSKRSNN*QPPKTFISTTS Trigger: GGAGGTGGTGCTGATGAAGGTTTTGGGAGGCTGCAAGTTGTTACTGCGCTTGCTGGACTGCTGCTGCAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
||
| CDS-3UTR CCA 90 bp | GCTATGCCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCACTGCAGTTCCCCGCCTaGGGGATCCTCACGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AMPDNLKSTCGDLNMLSPLQFPA*GILTRF Trigger: GAACCGCGTGAGGATCCCCCAGGCGGGGAACTGCAG...TGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGGCATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR CCA 90 bp | AAACTGCACAGAAGCAGCTCTCAGGCTAAGCAGTGTTCCCAGAGCTTAGCAACACAGGCTTTCACTGGCTaGCCCAGGTCCACAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLHRSSSQAKQCSQSLATQAFTG*PRSTVL Trigger: GAGCACTGTGGACCTGGGCCAGCCAGTGAAAGCCTG...TGTTGCTAAGCTCTGGGAACACTGCTTAGCCTGAGAGCTGCTTCTGTGCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR TCA 90 bp | GCTAAGCAGTGTTCCCAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTGGTCTGTAGCTCCAGGCTaGGTTGCATTGGCAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: AKQCSQSLATPLKGAEHWSVAPG*VALADN Trigger: GTTGTCTGCCAATGCAACTCAGCCTGGAGCTACAGA...CCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTGGGAACACTGCTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR TCA 90 bp | ACACCCCTTAAAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTACTGTTCTACCTGTCTaGGGGCCAAATGGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPLKGAEHWTSLLPARKFTVLPV*GPNGAC Trigger: ACAAGCCCCATTTGGCCCTCAGACAGGTAGAACAGT...AAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR TCA 90 bp | ACACCCCTTAAAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCAGACATCTGACCTCTaGACTGTCCCAGAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPLKGAEHWTSLLPARKFQTSDL*TVPEHL Trigger: GAGATGCTCTGGGACAGTTCAGAGGTCAGATGTCTG...AAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCCCAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTGGACCAGCAGCGCAGTAACAACTTaGAGCCTCCCAAAACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCSQSLATPLKGAEHWTSSAVTT*SLPKPS Trigger: TGAAGGTTTTGGGAGGCTGCAAGTTGTTACTGCGCT...GCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTGGGAACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCCCAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTGGACCAGCGTCCCTTCAGGGACCTaGTGGGTTTCCTTTAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCSQSLATPLKGAEHWTSVPSGT*WVSFKR Trigger: TCTTTTAAAGGAAACCCAGCAGGTCCCTGAAGGGAC...GCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTGGGAACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAAAACCCTAACTAAGACACCACTCCTGGAACCCATAGGTGGACAGAACTGTCTGAGGGCCAAATaGGGCTTGTGGTGGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKTLTKTPLLEPIGGQNCLRAK*GLWWPN Trigger: GTTGGGCCACCACAAGCCCCATTTGGCCCTCAGACA...GTTCTGTCCACCTATGGGTTCCAGGAGTGGTGTCTTAGTTAGGGTTTTACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR GCA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTACACAGTCAACAGAAATaGCTTGCAGCAGCAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEQSTGPACYLLGSFTSVHSQQK*LAAAVQ Trigger: CTGGACTGCTGCTGCAAGGCATTTCTGTTGACTGTG...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR GCA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTACTTTGTCTGGGAGGATaGTCTGAAGTGCTGGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: KEQSTGPACYLLGSFTSVLCLGG*SEVLVR Trigger: TCGTACCAGCACTTCAGAGCATCCTCCCAGACAAAG...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCCCAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTGGACCAGCCCTTCAGGGACCTGCTaGGTTTCCTTTAAAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QCSQSLATPLKGAEHWTSPSGTC*VSFKRV Trigger: AACTCTTTTAAAGGAAACCCAGCAGGTCCCTGAAGG...GCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTGGGAACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR CCA 90 bp | GCTAAGCAGTGTTCCCAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTGGCTCTTTAGCAGTGTCTaGCGCATTGTGTGTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKQCSQSLATPLKGAEHWLFSSV*RIVCVH Trigger: ATGCACACACACAATGCGCCAGACACTGCTAAAGAG...CCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTGGGAACACTGCTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| 3UTR CAA 72 bp | GCAACACCCCTTAAAGGAGCAGAGCACTGGACCAGCTaGTTACCTGCTCGGAAGTTTCACGTCAGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: ATPLKGAEHWTS*LPARKFHVSTS Trigger: AGATGTACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTGAGTTCTCAGTTGCTGAGAGGGAAGTTTGGTTGTCTTCAGTTTGGACTGACTGTTCTACCTGTCTaGGGGCCAAATGGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSSQLLRGKFGCLQFGLTVLPV*GPNGAC Trigger: ACAAGCCCCATTTGGCCCTCAGACAGGTAGAACAGT...CAGTCCAAACTGAAGACAACCAAACTTCCCTCTCAGCAACTGAGAACTCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
||
| CDS-3UTR TCA 90 bp | GCTATGCCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCAGGCCTAGAAAGTCAGTaGTGTCAGAGGGAAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AMPDNLKSTCGDLNMLSPGLESQ*CQRERQ Trigger: TTGCCTTTCCCTCTGACATCACTGACTTTCTAGGCC...TGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGGCATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR GCA 90 bp | CCCAGTGAGTTCTCAGTTGCTGAGAGGGAAGTTTGGTTGTCTTCAGTTTGGACTCACAGTCAACAGAAATaGCTTGCAGCAGCAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSEFSVAEREVWLSSVWTHSQQK*LAAAVQ Trigger: CTGGACTGCTGCTGCAAGGCATTTCTGTTGACTGTG...AGTCCAAACTGAAGACAACCAAACTTCCCTCTCAGCAACTGAGAACTCACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
||
| 3UTR CAA 72 bp | TTTAGCCCTAAGTGCTTCACAGTCAACAGAAATGCCTaGCAGCAGCAGTCCAGCAAGCGCAGTAACAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSPKCFTVNRNA*QQQSSKRSNNL Trigger: CAAGTTGTTACTGCGCTTGCTGGACTGCTGCTGCAAGGCATTTCTGTTGACTGTGAAGCACTTAGGGCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123673.8 ENSMUST00000147804.8 |
||
| 3UTR CAA 72 bp | TTCACTGGCTGGCCCAGGTCCACAGTGCTCTGTGGATaGCTTGTCATTTGTTCAGATGGTTTGGAAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FTGWPRSTVLCG*LVICSDGLESL Trigger: TAGACTTTCCAAACCATCTGAACAAATGACAAGCAATCCACAGAGCACTGTGGACCTGGGCCAGCCAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGTGAGTTCTCAGTTGCTGAGAGGGAAGTTTGGTTGTCTTCAGTTTGGAAGCGCAGTAACAACTTaGAGCCTCCCAAAACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPVSSQLLRGKFGCLQFGSAVTT*SLPKPS Trigger: TGAAGGTTTTGGGAGGCTGCAAGTTGTTACTGCGCT...TCCAAACTGAAGACAACCAAACTTCCCTCTCAGCAACTGAGAACTCACTGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
||
| CDS-3UTR GCA 90 bp | ACACCCCTTAAAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCCGGGACCACACAATTaGCATTTCAATTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPLKGAEHWTSLLPARKFPGPHN*HFNFFR Trigger: TCTGAAGAAATTGAAATGGCAATTGTGTGGTCCCGG...AAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS-3UTR GCA 90 bp | GCTAAGCAGTGTTCCCAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTGGGACTGTAACTTTCTCTaGGGTTTCCTTTGTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AKQCSQSLATPLKGAEHWDCNFL*GFLCLD Trigger: ATCAAGACAAAGGAAACCGCAGAGAAAGTTACAGTC...CCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTGGGAACACTGCTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR GCA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTAATCATCAATGTCATCTaGCTCTTTAGCAGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEQSTGPACYLLGSFTSVIINVI*LFSSVW Trigger: CCAGACACTGCTAAAGAGGCAGATGACATTGATGAT...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CCA 90 bp | CCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCAGGAATTGACTGTGTGACAAGGTaGCACCCTTTAGTGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDNLKSTCGDLNMLSPGIDCVTR*HPLVTA Trigger: AGCTGTCACTAAAGGGTGCCACCTTGTCACACAGTC...AATTCCTGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CCA 90 bp | GCTAAGCAGTGTTCCCAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTGGAAGGTCAAATCCCAATaGCTTTTCTTTTCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQCSQSLATPLKGAEHWKVKSQ*LFFSGP Trigger: AGGACCAGAAAAGAAAAGCCATTGGGATTTGACCTT...CCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTGGGAACACTGCTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR TCA 90 bp | TTTGGACTGAGAATATTTAAAGTCACGGTTGGTCTCCTGAGTCGCTTTGTTTCCTCTGTAGCTCCAGGCTaGGTTGCATTGGCAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FGLRIFKVTVGLLSRFVSSVAPG*VALADN Trigger: GTTGTCTGCCAATGCAACTCAGCCTGGAGCTACAGA...GGAAACAAAGCGACTCAGGAGACCAACCGTGACTTTAAATATTCTCAGTCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| CDS-3UTR TCA 90 bp | AAGACACCACTCCTGGAACCCATAGGTGGACAGAACCAACTCTCACAGGTTACCGAAAGGCAAAATCTTTaGAGTAAGGCATGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTPLLEPIGGQNQLSQVTERQNL*SKAWDE Trigger: TTCATCCCATGCCTTACTTCAAAGATTTTGCCTTTC...GGTAACCTGTGAGAGTTGGTTCTGTCCACCTATGGGTTCCAGGAGTGGTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR GCA 90 bp | CAGAAACTGACTTGTTTCAGTCATGAAGGACGTGTTCCTCAGACTGTTCATCATGGAGAACCCATAGCCTaGTCACCAGTCCAACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QKLTCFSHEGRVPQTVHHGEPIA*SPVQPS Trigger: TGATGGTTGGACTGGTGAGCAGGCTATGGGTTCTCC...ATGATGAACAGTCTGAGGAACACGTCCTTCATGACTGAAACAAGTCAGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CCA 90 bp | ACACCCCTTAAAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTATGGCTTTTCTTTTCTaGTCCTCTTACAGGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLKGAEHWTSLLPARKFMAFLF*SSYRLS Trigger: TGAAAGCCTGTAAGAGGACCAGAAAAGAAAAGCCAT...AAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CCA 90 bp | GCTATGCCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCAGCTGAGAGGGAAGTTTaGTTGTCTTCAGTTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AMPDNLKSTCGDLNMLSPAEREV*LSSVWT Trigger: AGTCCAAACTGAAGACAACCAAACTTCCCTCTCAGC...TGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGGCATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR TCA 90 bp | GCTATGCCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCACAGGTGTTTTTACCTTaGACACTTCAAGGTAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMPDNLKSTCGDLNMLSPQVFLP*TLQGKR Trigger: CCTCTTACCTTGAAGTGTTCAAGGTAAAAACACCTG...TGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGGCATAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR TCA 90 bp | AGCAGTAAAACCCTAACTAAGACACCACTCCTGGAACCCATAGGTGGACAGAACATCTGTGTCTTCGCCTaGAAGCCAGATTCATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSKTLTKTPLLEPIGGQNICVFA*KPDSFL Trigger: TAGAAATGAATCTGGCTTTCAGGCGAAGACACAGAT...GTTCTGTCCACCTATGGGTTCCAGGAGTGGTGTCTTAGTTAGGGTTTTACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR GCA 90 bp | AAACTGCACAGAAGCAGCTCTCAGGCTAAGCAGTGTTCCCAGAGCTTAGCAACAAGAGAGATGTTTTCATaGACTGGAGCTTCTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLHRSSSQAKQCSQSLATREMFS*TGASLS Trigger: TGACAAAGAAGCTCCAGTGCATGAAAACATCTCTCT...TGTTGCTAAGCTCTGGGAACACTGCTTAGCCTGAGAGCTGCTTCTGTGCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR CAA 72 bp | TCTTTGCACAGTATCGTTAGCCCAGTGAGTTCTCAGTaGCTGAGAGGGAAGTTTGGTTGTCTTCAGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLHSIVSPVSSQ*LRGKFGCLQFG Trigger: TCCAAACTGAAGACAACCAAACTTCCCTCTCAGCAACTGAGAACTCACTGGGCTAACGATACTGTGCAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| 3UTR CAA 72 bp | GCCATTTCAATTTCTTCAGAAAGTTGGGCGAACGTCTaGGTCTTTCGGATTCTTTGCACAGTATCGTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AISISSESWANV*VFRILCTVSLA Trigger: GGCTAACGATACTGTGCAAAGAATCCGAAAGACCAAGACGTTCGCCCAACTTTCTGAAGAAATTGAAATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| 3UTR CAA 72 bp | GGACCACACAATTGCCATTTCAATTTCTTCAGAAAGTaGGGCGAACGTCTTGGTCTTTCGGATTCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPHNCHFNFFRK*GERLGLSDSLH Trigger: GTGCAAAGAATCCGAAAGACCAAGACGTTCGCCCAACTTTCTGAAGAAATTGAAATGGCAATTGTGTGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| CDS-3UTR GCA 90 bp | CAGAAACTGACTTGTTTCAGTCATGAAGGACGTGTTCCTCAGACTGTTCATCATTCCTTTAGCCCTAAGTaGTTCACAGTCAACAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QKLTCFSHEGRVPQTVHHSFSPK*FTVNRN Trigger: ATTTCTGTTGACTGTGAAGCACTTAGGGCTAAAGGA...ATGATGAACAGTCTGAGGAACACGTCCTTCATGACTGAAACAAGTCAGTTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR TCA 90 bp | AACTCTCACAGGTTACCCACTGATATTCACATTCATGTAAGTTACCCTCTGATAGTCTTCAGTTTGGACTaGGAATATTTAAAGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: NSHRLPTDIHIHVSYPLIVFSLD*EYLKSR Trigger: CCGTGACTTTAAATATTCTCAGTCCAAACTGAAGAC...TATCAGAGGGTAACTTACATGAATGTGAATATCAGTGGGTAACCTGTGAGAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR GCA 90 bp | CAGAAACTGACTTGTTTCAGTCATGAAGGACGTGTTCCTCAGACTGTTCATCATTTCATCTTTGGTAGCTaGTCTCTCATTAAAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QKLTCFSHEGRVPQTVHHFIFGS*SLIKNS Trigger: ACTGTTTTTAATGAGAGAGCAGCTACCAAAGATGAA...ATGATGAACAGTCTGAGGAACACGTCCTTCATGACTGAAACAAGTCAGTTTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| 3UTR CAA 72 bp | TTTCATGCACTGGAGCTTCTTTGTCAAACTATAGCCTaGAGATTCCACATGTCTAAACCTATTACTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHALELLCQTIA*RFHMSKPITLK Trigger: CTTAAGAGTAATAGGTTTAGACATGTGGAATCTCAAGGCTATAGTTTGACAAAGAAGCTCCAGTGCATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147804.8 |
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| CDS TCA 90 bp | ACCACCGGCTGGCTGGGGACGACGCGGTTTTCTGTAGCTCCAGGCTaGGTTGCATTGGCAGACAACAACTGTGACAGGTCTTCAATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTGWLGTTRFSVAPG*VALADNNCDRSSIE Trigger: CTCAATTGAAGACCTGTCACAGTTGTTGTCTGCCAATGCAACTCAGCCTGGAGCTACAGAAAACCGCGTCGTCCCCAGCCAGCCGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048788.14 ENSMUST00000132610.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTTCCCAGAGCTTAGCAACACCCCTTAAAGGAGCAGAGCACTGGACCAGCGAGAGGGAAGTTTGGTaGTCTTCAGTTTGGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QCSQSLATPLKGAEHWTSEREVW*SSVWTE Trigger: CTCAGTCCAAACTGAAGACAACCAAACTTCCCTCTC...GCTGGTCCAGTGCTCTGCTCCTTTAAGGGGTGTTGCTAAGCTCTGGGAACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTAAAGCGCAGTAACAACTaGCAGCCTCCCAAAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KEQSTGPACYLLGSFTSVKRSNN*QPPKTF Trigger: GAAGGTTTTGGGAGGCTGCAAGTTGTTACTGCGCTT...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | CACAGAAGCAGCTCTCAGGCTAAGCAGTGTTCCCAGAGCTTAGCAACACCCCTTTGCACTGGAGCTTCTTaGTCAAACTATAGCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRSSSQAKQCSQSLATPLCTGAS*SNYSLE Trigger: CTCAAGGCTATAGTTTGACAAAGAAGCTCCAGTGCA...AAGGGGTGTTGCTAAGCTCTGGGAACACTGCTTAGCCTGAGAGCTGCTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | GCTATGCCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCACCTCGGAGAAGGCAGTaGCAGAGAGATGTTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: AMPDNLKSTCGDLNMLSPPRRRQ*QRDVFM Trigger: CATGAAAACATCTCTCTGCAACTGCCTTCTCCGAGG...TGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGGCATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | AAGACACCACTCCTGGAACCCATAGGTGGACAGAACCAACTCTCACAGGTTACCGTGACAGGTCTTCAATaGAGCCCTCCAAATTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: KTPLLEPIGGQNQLSQVTVTGLQ*SPPNSY Trigger: ATATGAATTTGGAGGGCTCAATTGAAGACCTGTCAC...GGTAACCTGTGAGAGTTGGTTCTGTCCACCTATGGGTTCCAGGAGTGGTGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | AAGGAGCAGAGCACTGGACCAGCTTGTTACCTGCTCGGAAGTTTCACGTCAGTAACAGTGCTCTGTGGATaGCTTGTCATTTGTTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KEQSTGPACYLLGSFTSVTVLCG*LVICSD Trigger: ATCTGAACAAATGACAAGCAATCCACAGAGCACTGT...TACTGACGTGAAACTTCCGAGCAGGTAACAAGCTGGTCCAGTGCTCTGCTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | CAGAAACTGACTTGTTTCAGTCATGAAGGACGTGTTCCTCAGACTGTTCATCATGTCAACAGAAATGCCTaGCAGCAGCAGTCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QKLTCFSHEGRVPQTVHHVNRNA*QQQSSK Trigger: CTTGCTGGACTGCTGCTGCAAGGCATTTCTGTTGAC...ATGATGAACAGTCTGAGGAACACGTCCTTCATGACTGAAACAAGTCAGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | AAGACACCACTCCTGGAACCCATAGGTGGACAGAACCAACTCTCACAGGTTACCTGGATTGCTTGTCATTaGTTCAGATGGTTTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KTPLLEPIGGQNQLSQVTWIACH*FRWFGK Trigger: CTTTCCAAACCATCTGAACAAATGACAAGCAATCCA...GGTAACCTGTGAGAGTTGGTTCTGTCCACCTATGGGTTCCAGGAGTGGTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | GCTATGCCTGACAATCTGAAGTCCACCTGTGGTGACTTGAATATGCTTAGCCCATCCGGGACCACACAATaGCCATTTCAATTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AMPDNLKSTCGDLNMLSPSGTTQ*PFQFLQ Trigger: CTGAAGAAATTGAAATGGCAATTGTGTGGTCCCGGA...TGGGCTAAGCATATTCAAGTCACCACAGGTGGACTTCAGATTGTCAGGCATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS GCA 90 bp | AAAGGTAGCCTGAGTCTTGAGCTTTTTGCTCCGGGACCACACAATTaGCATTTCAATTTCTTCAGAAAGTTGGGCGAACGTCTTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KGSLSLELFAPGPHN*HFNFFRKLGERLGL Trigger: AAGACCAAGACGTTCGCCCAACTTTCTGAAGAAATTGAAATGGCAATTGTGTGGTCCCGGAGCAAAAAGCTCAAGACTCAGGCTACCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | CCAGTGAGTTCTCAGTTGCTGAGAGGGAAGTTTGGTTGTCTTCAGTTTGGACTGGTGACAGGTCTTCAATaGAGCCCTCCAAATTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PVSSQLLRGKFGCLQFGLVTGLQ*SPPNSY Trigger: ATATGAATTTGGAGGGCTCAATTGAAGACCTGTCAC...CAGTCCAAACTGAAGACAACCAAACTTCCCTCTCAGCAACTGAGAACTCACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| CDS-3UTR CAA 90 bp | AATTTCTTCAGAAAGTTGGGCGAACGTCTTGGTCTTTCGGATTCTTTGCACAGTAAGCGCAGTAACAACTaGCAGCCTCCCAAAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NFFRKLGERLGLSDSLHSKRSNN*QPPKTF Trigger: GAAGGTTTTGGGAGGCTGCAAGTTGTTACTGCGCTT...ACTGTGCAAAGAATCCGAAAGACCAAGACGTTCGCCCAACTTTCTGAAGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132610.2 |
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| CDS TCA 90 bp | CTAAACCTATTACTCTTAAGAAGTTTGTTGCCCAGAAAGGTAGCCTaGGTCTTGAGCTTTTTGCTCCGGGACCACACAATTGCCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNLLLLRSLLPRKVA*VLSFLLRDHTIAIS Trigger: TGAAATGGCAATTGTGTGGTCCCGGAGCAAAAAGCTCAAGACTCAGGCTACCTTTCTGGGCAACAAACTTCTTAAGAGTAATAGGTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | AACTCTCACAGGTTACCCACTGATATTCACATTCATGTAAGTTACCCTCTGATACTTTGTTTCCAAGTCTaGTGCAAAAAGCCCGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NSHRLPTDIHIHVSYPLILCFQV*CKKPEG Trigger: ACCTTCGGGCTTTTTGCACAAGACTTGGAAACAAAG...TATCAGAGGGTAACTTACATGAATGTGAATATCAGTGGGTAACCTGTGAGAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | AACTCTCACAGGTTACCCACTGATATTCACATTCATGTAAGTTACCCTCTGATATGTCTTCATTCATCTTaGGTAGCTGCTCTCTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: NSHRLPTDIHIHVSYPLICLHSS*VAALSL Trigger: TAATGAGAGAGCAGCTACCAAAGATGAATGAAGACA...TATCAGAGGGTAACTTACATGAATGTGAATATCAGTGGGTAACCTGTGAGAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS-3UTR CAA 90 bp | AACTCTCACAGGTTACCCACTGATATTCACATTCATGTAAGTTACCCTCTGATATTTTTAGGTCAGGCTTaGCAAGTTTTCTCAAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: NSHRLPTDIHIHVSYPLIFLGQA*QVFSRP Trigger: AGGTCTTGAGAAAACTTGCAAAGCCTGACCTAAAAA...TATCAGAGGGTAACTTACATGAATGTGAATATCAGTGGGTAACCTGTGAGAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS CCA 72 bp | GGGTCCCGCACGGTCAGCGTGCTGCAGTTCCCCGCCTaGGGGATCCTCACGCGGTTCCACGGCTCCGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: GSRTVSVLQFPA*GILTRFHGSAP Trigger: GGGTGCGGAGCCGTGGAACCGCGTGAGGATCCCCCAGGCGGGGAACTGCAGCACGCTGACCGTGCGGGACCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048788.14 ENSMUST00000123673.8 ENSMUST00000147804.8 |
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| CDS TCA 72 bp | CACATCTACTTCCGCATCCAAGGTCTGGCTCTTGAGTaGCTGTGTGACAAGGTGGCACCCTTTAGTGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: HIYFRIQGLALE*LCDKVAPFSDS Trigger: GCTGTCACTAAAGGGTGCCACCTTGTCACACAGTCACTCAAGAGCCAGACCTTGGATGCGGAAGTAGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS CCA 72 bp | TCCAAGGTCTGGCTCTTGAGTGACTGTGTGACAAGGTaGCACCCTTTAGTGACAGCTGCAGTGCAGATATCC | + |
|
Preference number: 6 (lower is better) Translates to: SKVWLLSDCVTR*HPLVTAAVQIS Trigger: GGATATCTGCACTGCAGCTGTCACTAAAGGGTGCCACCTTGTCACACAGTCACTCAAGAGCCAGACCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS CCA 72 bp | ACTGAGCATAACACATCTACTTCCGCATCCAAGGTCTaGCTCTTGAGTGACTGTGTGACAAGGTGGCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: TEHNTSTSASKV*LLSDCVTRWHP Trigger: AGGGTGCCACCTTGTCACACAGTCACTCAAGAGCCAGACCTTGGATGCGGAAGTAGATGTGTTATGCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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| CDS CAA 90 bp | AGAACTGAGCATAACACATCTACTTCCGCATCCAAGGTCTGGCTCTaGAGTGACTGTGTGACAAGGTGGCACCCTTTAGTGACAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RTEHNTSTSASKVWL*SDCVTRWHPLVTAA Trigger: TGCAGCTGTCACTAAAGGGTGCCACCTTGTCACACAGTCACTCAAGAGCCAGACCTTGGATGCGGAAGTAGATGTGTTATGCTCAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS GCA 72 bp | CCAAATGGGGCTTGTGGTGGCCCAACCTGTTGTGATTaGTGTAGAGAACTGAGCATAACACATCTACTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PNGACGGPTCCD*CRELSITHLLP Trigger: CGGAAGTAGATGTGTTATGCTCAGTTCTCTACAGCAATCACAACAGGTTGGGCCACCACAAGCCCCATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS CAA 72 bp | CATAACACATCTACTTCCGCATCCAAGGTCTGGCTCTaGAGTGACTGTGTGACAAGGTGGCACCCTTTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HNTSTSASKVWL*SDCVTRWHPLV Trigger: CACTAAAGGGTGCCACCTTGTCACACAGTCACTCAAGAGCCAGACCTTGGATGCGGAAGTAGATGTGTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
||
| CDS TCA 72 bp | TTACTCTTAAGAAGTTTGTTGCCCAGAAAGGTAGCCTaGGTCTTGAGCTTTTTGCTCCGGGACCACACAATT | + |
|
Preference number: 6 (lower is better) Translates to: LLLRSLLPRKVA*VLSFLLRDHTI Trigger: AATTGTGTGGTCCCGGAGCAAAAAGCTCAAGACTCAGGCTACCTTTCTGGGCAACAAACTTCTTAAGAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048788.14 |
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