Pregenerated sensors for NEPN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038624Ensembl transcript IDs: ENSMUST00000067085.7, ENSMUST00000219730.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTATGATAGCACACTTGTaGTTAAGACAGTGGACATTA | + |
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Preference number: 2 (lower is better) Translates to: TQLVSNQERSLLLFPHRFMIAHL*LRQWTL Trigger: TAATGTCCACTGTCTTAAGCACAAGTGTGCTATCAT...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR TCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTGGATGGCATTGCCCTTaGGGTCCAGCCTGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFGWHCP*GPAWPG Trigger: CCCTGGCCAGGCTGGACCTCAAGGGCAATGCCATCC...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR TCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTCCAGGTAGAGATGCCTaGGCCGAGGCAGCCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFPGRDA*AEAAPP Trigger: TGGAGGGGCTGCCTCGGCTCAGGCATCTCTACCTGG...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTCGCTCTGCTGGGGCTaGGCACTGTCCCCCTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFSLCWG*ALSPFH Trigger: GTGAAAGGGGGACAGTGCGCAGCCCCAGCAGAGCGA...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR TCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTGCCCCTCCAGTGCCTTaGAATCTAAGGCCGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFAPPVP*NLRPRS Trigger: GGATCTCGGCCTTAGATTTCAAGGCACTGGAGGGGC...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTTCACGTCCGTGCCCTTaGCCTTCAGGACTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPSRPCP*PSGLPW Trigger: CCAGGGAAGTCCTGAAGGCCAAGGGCACGGACGTGA...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTGTGGGGAGAGCATGCTaGGAGACAGGGACGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPVGRAC*ETGTRS Trigger: TGATCTCGTCCCTGTCTCCCAGCATGCTCTCCCCAC...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTGCTCCAGGGCCAGGTTaGACAGCTGAGAACACCTCT | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPAPGPG*TAENTS Trigger: AGAGGTGTTCTCAGCTGTCCAACCTGGCCCTGGAGC...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTGCCTCAGGATCTTCTTaGAGGACATCCAGCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFASGSS*RTSSSP Trigger: GGGAGAGCTGGATGTCCTCCAAGAAGATCCTGAGGC...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTGACAACAGCAGATTCTaGTCCAGGGCCAGGTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPDNSRF*SRARLD Trigger: GTCCAACCTGGCCCTGGAGCAGAATCTGCTGTTGTC...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTTAACACCTCAAGGTTaGCTGGGAGAGCACTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFLTPQG*LGEHWG Trigger: TCCCCAGTGCTCTCCCAGCCAACCTTGAGGTGTTAA...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTCTGCAAACTGGCAAGTaGGGAGAGCATGCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPLQTGK*GEHAGR Trigger: TCTCCCAGCATGCTCTCCCCACTTGCCAGTTTGCAG...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR TCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTCTGGGAGGCAACATTTaGAGCTGGTTTTGGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFLGGNI*SWFWET Trigger: GGTTTCCCAAAACCAGCTTCAAATGTTGCCTCCCAG...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTCGTCCTGGACAGTTTaGACTGAGGCCATTGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFSSWTV*TEAIGK Trigger: CTTACCAATGGCCTCAGTGCAAACTGTCCAGGACGA...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTCTCATGTACTTGAGATaGGGAAGGCTCAGAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFLMYLR*GRLRGP Trigger: TGGACCTCTGAGCCTTCCGCATCTCAAGTACATGAG...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTATTGGTCAGCTGCTGTaGCCCATCAATGGAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFIGQLL*PINGRQ Trigger: CTGTCTTCCATTGATGGGGCACAGCAGCTGACCAAT...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTTGGCTCGTAGGAGACTaGAAGTGCAGTTCCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPWLVGD*KCSSRD Trigger: ATCCCTGGAACTGCACTTGCAGTCTCCTACGAGCCA...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTCAAACTCTGCAAACTaGCAAGTGGGGAGAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFSNSAN*QVGRAC Trigger: GCATGCTCTCCCCACTTGCCAGTTTGCAGAGTTTGA...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTCTTTCAGCCATGTCCTaGATGGCATTGCCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPLSAMS*MALPLR Trigger: CCTCAAGGGCAATGCCATCCAGGACATGGCTGAAAG...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR TCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTTCACTCTGCTGTAAGTaGTGCTCACATTGCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPSLCCK*CSHCLR Trigger: CCTGAGGCAATGTGAGCATCACTTACAGCAGAGTGA...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTTCCACCATCAAACTCTaGAAACTGGCAAGTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPSTIKL*KLASGE Trigger: CTCCCCACTTGCCAGTTTGCAGAGTTTGATGGTGGA...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTGTAGGAGACTGCAAGTaGAGTTCCAGGGATTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPVGDCK*SSRDSH Trigger: ATGGGAATCCCTGGAACTGCACTTGCAGTCTCCTAC...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTCCAGAGTTGTTAAATTaGTCAGCTGCTGTGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFPELLN*SAAVPH Trigger: ATGGGGCACAGCAGCTGACCAATTTAACAACTCTGG...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTGAGGTCCTGGAATTCTaGTGCTGTCACTCTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFEVLEF*CCHSLN Trigger: ATTCAGAGAGTGACAGCACCAGAATTCCAGGACCTC...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR TCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTGTGAAGTTAGATAGCTaGAGGTGCTGGATTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPVKLDS*RCWILL Trigger: CAGCAGAATCCAGCACCTTCAGCTATCTAACTTCAC...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR TCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTAGACAGGAAGTTCTCTaGCAGGTAAAGATGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPRQEVL*QVKMGQ Trigger: CTGTCCCATCTTTACCTGTCAGAGAACTTCCTGTCT...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTTGGCTGGGAGAGCACTaGGGACTTGTCTCAATTTAT | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPWLGEH*GLVSIY Trigger: ATAAATTGAGACAAGTCCCCAGTGCTCTCCCAGCCA...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTCTGAAACTGAGGAACTaGAAATTCTGTAGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFLKLRN*KFCREV Trigger: CACTTCCCTACAGAATTTGCAGTTCCTCAGTTTCAG...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTGTTAAATTGGTCAGCTaGTGTGCCCCATCAATGGAA | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPVKLVS*CAPSME Trigger: TTCCATTGATGGGGCACAGCAGCTGACCAATTTAAC...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTGTCCTGGAATTCTGGTaGTGTCACTCTCTGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPVLEFW*CHSLNE Trigger: TTCATTCAGAGAGTGACAGCACCAGAATTCCAGGAC...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTGTTTGGGTTTCTTCTTaGTCTCTTTGCTTTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TQLVSNQERSLLLFPHRFVWVSS*SLCFSH Trigger: GTGAGAAAAGCAAAGAGACCAAGAAGAAACCCAAAC...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR GCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTTCTTCTTGGTCTCTTTaGTTTTCTCACTCTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPSSWSL*FSHSAV Trigger: TACAGCAGAGTGAGAAAAGCAAAGAGACCAAGAAGA...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CCA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTCTGACCACTTTGAGCTaGTTTCTCTCCATCTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: FKPGKKPTFVSSQILTNPLTTLS*FLSIFK Trigger: TTTAAAGATGGAGAGAAACCAGCTCAAAGTGGTCAG...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| 3UTR CAA 72 bp | CTTTCAAAAGTAGCAAGAACAACTTACAAAGAAGGCTaGCAATGTTTAAATGATAGCACACTTGTGCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: LSKVARTTYKEG*QCLNDSTLVLK Trigger: CTTAAGCACAAGTGTGCTATCATTTAAACATTGCAAGCCTTCTTTGTAAGTTGTTCTTGCTACTTTTGAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS GCA 90 bp | CCTGTCGCTCTGCTGGGGCTGCGCACTGTCCCCCTTTCACGTCCGTaGCCTTGGCCTTCAGGACTTCCCTGGCTCGTAGGAGACTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PVALLGLRTVPLSRP*PWPSGLPWLVGDCK Trigger: CTTGCAGTCTCCTACGAGCCAGGGAAGTCCTGAAGGCCAAGGGCACGGACGTGAAAGGGGGACAGTGCGCAGCCCCAGCAGAGCGACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS CCA 90 bp | GCTCTGCTGGGGCTGCGCACTGTCCCCCTTTCACGTCCGTGCCCTTaGCCTTCAGGACTTCCCTGGCTCGTAGGAGACTGCAAGTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: ALLGLRTVPLSRPCP*PSGLPWLVGDCKCS Trigger: ACTGCACTTGCAGTCTCCTACGAGCCAGGGAAGTCCTGAAGGCCAAGGGCACGGACGTGAAAGGGGGACAGTGCGCAGCCCCAGCAGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS CCA 90 bp | CAGGATCTTCTTGGAGGACATCCAGCTCTCCCCCTGTCGCTCTGCTaGGGCTGCGCACTGTCCCCCTTTCACGTCCGTGCCCTTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: QDLLGGHPALPLSLC*GCALSPFHVRALGL Trigger: AAGGCCAAGGGCACGGACGTGAAAGGGGGACAGTGCGCAGCCCCAGCAGAGCGACAGGGGGAGAGCTGGATGTCCTCCAAGAAGATCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS CCA 90 bp | ACTGTCCCCCTTTCACGTCCGTGCCCTTGGCCTTCAGGACTTCCCTaGCTCGTAGGAGACTGCAAGTGCAGTTCCAGGGATTCCCATCCA | + |
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Preference number: 5 (lower is better) Translates to: TVPLSRPCPWPSGLP*LVGDCKCSSRDSHP Trigger: TGGATGGGAATCCCTGGAACTGCACTTGCAGTCTCCTACGAGCCAGGGAAGTCCTGAAGGCCAAGGGCACGGACGTGAAAGGGGGACAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS CCA 90 bp | TCTCACTCTGCTGTAAGTGATGCTCACATTGCCTCAGGATCTTCTTaGAGGACATCCAGCTCTCCCCCTGTCGCTCTGCTGGGGCTGCGC | + |
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Preference number: 5 (lower is better) Translates to: SHSAVSDAHIASGSS*RTSSSPPVALLGLR Trigger: GCGCAGCCCCAGCAGAGCGACAGGGGGAGAGCTGGATGTCCTCCAAGAAGATCCTGAGGCAATGTGAGCATCACTTACAGCAGAGTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS TCA 90 bp | TGGACAGCTGAGAACACCTCTGAAGGGCCCCAGCCTCGAACAAGCTaGCAACATTGTTGTCTAGAAACAGATGTTTCAGGTCTCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: WTAENTSEGPQPRTS*QHCCLETDVSGLGG Trigger: ACCTCCGAGACCTGAAACATCTGTTTCTAGACAACAATGTTGTCAGCTTGTTCGAGGCTGGGGCCCTTCAGAGGTGTTCTCAGCTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS TCA 90 bp | ATTGGTCAGCTGCTGTGCCCCATCAATGGAAGACAGGAAGTTCTCTaGCAGGTAAAGATGGGACAGGTTCTCCAAGTGTTTCATATCGCG | + |
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Preference number: 5 (lower is better) Translates to: IGQLLCPINGRQEVL*QVKMGQVLQVFHIA Trigger: CGCGATATGAAACACTTGGAGAACCTGTCCCATCTTTACCTGTCAGAGAACTTCCTGTCTTCCATTGATGGGGCACAGCAGCTGACCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS CCA 90 bp | CTCTATGTTGTTACCATCCACCATCAAACTCTGCAAACTGGCAAGTaGGGAGAGCATGCTGGGAGACAGGGACGAGATCAAGTTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: LYVVTIHHQTLQTGK*GEHAGRQGRDQVVF Trigger: AAAAACAACTTGATCTCGTCCCTGTCTCCCAGCATGCTCTCCCCACTTGCCAGTTTGCAGAGTTTGATGGTGGATGGTAACAACATAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
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| CDS TCA 90 bp | CAATCAAGCTTCTGTAACCTCGATGGTAGCCTGGGAGGCAACATTTaGAGCTGGTTTTGGGAAACCTCCAGAGTTGTTAAATTGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: QSSFCNLDGSLGGNI*SWFWETSRVVKLVS Trigger: GCTGACCAATTTAACAACTCTGGAGGTTTCCCAAAACCAGCTTCAAATGTTGCCTCCCAGGCTACCATCGAGGTTACAGAAGCTTGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS TCA 90 bp | TGTTTCAGGTCTCGGAGGTCCTGGAATTCTGGTGCTGTCACTCTCTaGATGAAGTTACTGCTACAATCAAGCTTCTGTAACCTCGATGGT | + |
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Preference number: 5 (lower is better) Translates to: CFRSRRSWNSGAVTL*MKLLLQSSFCNLDG Trigger: ACCATCGAGGTTACAGAAGCTTGATTGTAGCAGTAACTTCATTCAGAGAGTGACAGCACCAGAATTCCAGGACCTCCGAGACCTGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS CCA 90 bp | GCAACATTTGAAGCTGGTTTTGGGAAACCTCCAGAGTTGTTAAATTaGTCAGCTGCTGTGCCCCATCAATGGAAGACAGGAAGTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ATFEAGFGKPPELLN*SAAVPHQWKTGSSL Trigger: CAGAGAACTTCCTGTCTTCCATTGATGGGGCACAGCAGCTGACCAATTTAACAACTCTGGAGGTTTCCCAAAACCAGCTTCAAATGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
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| CDS-3UTR CAA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTTGGATGGCATTGCCCTaGAGGTCCAGCCTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FKPGKKPTFVSSQILTNPWMALP*RSSLAR Trigger: CCTGGCCAGGCTGGACCTCAAGGGCAATGCCATCCA...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 90 bp | AAATTCTGTAGGGAAGTGAAGACATTCCCTGGTATAAGGTGGAGTTaGTTGTTCTCCATGCTCATGTACTTGAGATGCGGAAGGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KFCREVKTFPGIRWS*LFSMLMYLRCGRLR Trigger: TCTGAGCCTTCCGCATCTCAAGTACATGAGCATGGAGAACAACCAACTCCACCTTATACCAGGGAATGTCTTCACTTCCCTACAGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS-3UTR CAA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTATGTCCTGGATGGCATaGCCCTTGAGGTCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQLVSNQERSLLLFPHRFMSWMA*PLRSSL Trigger: CAGGCTGGACCTCAAGGGCAATGCCATCCAGGACAT...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTGTTGAGGACCTGCAGTaGTTTGAGGTCCCTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVSNQERSLLLFPHRFVEDLQ*FEVPEL Trigger: GAGCTCAGGGACCTCAAACAACTGCAGGTCCTCAAC...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTAGCCCCTCCAGTGCCTaGAAATCTAAGGCCGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVSNQERSLLLFPHRFSPSSA*KSKAEI Trigger: GATCTCGGCCTTAGATTTCAAGGCACTGGAGGGGCT...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTGCCTCAGGATCTTCTaGGAGGACATCCAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVSNQERSLLLFPHRFCLRIF*EDIQLS Trigger: GGAGAGCTGGATGTCCTCCAAGAAGATCCTGAGGCA...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTTTTAACACCTCAAGGTaGGCTGGGAGAGCACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FKPGKKPTFVSSQILTNPFNTSR*AGRALG Trigger: CCCCAGTGCTCTCCCAGCCAACCTTGAGGTGTTAAA...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTCGGTTGTTCCTGAGGTaGAGGACCTGCAGTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TQLVSNQERSLLLFPHRFRLFLR*RTCSCL Trigger: CAAACAACTGCAGGTCCTCAACCTCAGGAACAACCG...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTCGTCGTCATCCATGTaGAGTCTGATGCTGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQLVSNQERSLLLFPHRFSSSSM*SLMLEE Trigger: CTCTTCCAGCATCAGACTCAACATGGATGACGACGA...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 90 bp | AGGTTCTCCAAGTGTTTCATATCGCGAAACCTGACCACTTTGAGCTaGTTTCTCTCCATCTTTAAAGATAGCAAGGATTTGGGTAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: RFSKCFISRNLTTLS*FLSIFKDSKDLGRF Trigger: AAATCTACCCAAATCCTTGCTATCTTTAAAGATGGAGAGAAACCAGCTCAAAGTGGTCAGGTTTCGCGATATGAAACACTTGGAGAACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTTTTGCACTGAGGCCATaGGTAAGAGAGAGCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FKPGKKPTFVSSQILTNPFALRP*VRESPK Trigger: TTTGGGGCTCTCTCTTACCAATGGCCTCAGTGCAAA...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTCCTGGGAGGCAACATTaGAAGCTGGTTTTGGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FKPGKKPTFVSSQILTNPPGRQH*KLVLGN Trigger: GTTTCCCAAAACCAGCTTCAAATGTTGCCTCCCAGG...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTGAAGAGTCTTCGGGTTaGGGTTTCTTCTTGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TQLVSNQERSLLLFPHRFEESSG*GFFLVS Trigger: AGAGACCAAGAAGAAACCCAAACCCGAAGACTCTTC...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTGGGAAACCTCCAGAGTaGTTAAATTGGTCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FKPGKKPTFVSSQILTNPGKPPE*LNWSAA Trigger: AGCAGCTGACCAATTTAACAACTCTGGAGGTTTCCC...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTCATTTGAAGCTGGTTTaGGGAAACCTCCAGAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TQLVSNQERSLLLFPHRFHLKLV*GNLQSC Trigger: ACAACTCTGGAGGTTTCCCAAAACCAGCTTCAAATG...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTACCACGGACTCTATGTaGTTACCATCCACCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FKPGKKPTFVSSQILTNPTTDSM*LPSTIK Trigger: TTTGATGGTGGATGGTAACAACATAGAGTCCGTGGT...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTTAACTAATCCTGAGAGCACTGGGGACTaGTCTCAATTTATTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FKPGKKPTFVSSQILTNPESTGD*SQFIFP Trigger: TGGAAAAATAAATTGAGACAAGTCCCCAGTGCTCTC...AGGATTAGTTAAAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 90 bp | CATTATCATTTAATTTTAACACCTCAAGGTTGGCTGGGAGAGCACTaGGGACTTGTCTCAATTTATTTTTCCAAAGTTCTAGAGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HYHLILTPQGWLGEH*GLVSIYFSKVLESL Trigger: TAAAGACTCTAGAACTTTGGAAAAATAAATTGAGACAAGTCCCCAGTGCTCTCCCAGCCAACCTTGAGGTGTTAAAATTAAATGATAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS-3UTR CAA 90 bp | ACACAACTTGTTTCAAACCAGGAAAGAAGCCTACTTTTGTTTCCTCACAGATTTAAGCTGACAACATTGTaGTCTAGAAACAGATGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVSNQERSLLLFPHRFKLTTL*SRNRCF Trigger: GAAACATCTGTTTCTAGACAACAATGTTGTCAGCTT...AAATCTGTGAGGAAACAAAAGTAGGCTTCTTTCCTGGTTTGAAACAAGTTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 72 bp | CTTGGAGGACATCCAGCTCTCCCCCTGTCGCTCTGCTaGGGCTGCGCACTGTCCCCCTTTCACGTCCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGGHPALPLSLC*GCALSPFHVRA Trigger: GGCACGGACGTGAAAGGGGGACAGTGCGCAGCCCCAGCAGAGCGACAGGGGGAGAGCTGGATGTCCTCCAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS GCA 72 bp | CTGCTGGGGCTGCGCACTGTCCCCCTTTCACGTCCGTaGCCTTGGCCTTCAGGACTTCCCTGGCTCGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLGLRTVPLSRP*PWPSGLPWLVG Trigger: TCCTACGAGCCAGGGAAGTCCTGAAGGCCAAGGGCACGGACGTGAAAGGGGGACAGTGCGCAGCCCCAGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 72 bp | GGGCTGCGCACTGTCCCCCTTTCACGTCCGTGCCCTTaGCCTTCAGGACTTCCCTGGCTCGTAGGAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLRTVPLSRPCP*PSGLPWLVGDC Trigger: GCAGTCTCCTACGAGCCAGGGAAGTCCTGAAGGCCAAGGGCACGGACGTGAAAGGGGGACAGTGCGCAGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CAA 90 bp | AGGTCCCTGAGCTCCCTTTCAGCCATGTCCTGGATGGCATTGCCCTaGAGGTCCAGCCTGGCCAGGGTCTTAGGGAGCCTCAGAGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: RSLSSLSAMSWMALP*RSSLARVLGSLRGI Trigger: TATCCCTCTGAGGCTCCCTAAGACCCTGGCCAGGCTGGACCTCAAGGGCAATGCCATCCAGGACATGGCTGAAAGGGAGCTCAGGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CAA 90 bp | TGTTTGAGGTCCCTGAGCTCCCTTTCAGCCATGTCCTGGATGGCATaGCCCTTGAGGTCCAGCCTGGCCAGGGTCTTAGGGAGCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CLRSLSSLSAMSWMA*PLRSSLARVLGSLR Trigger: TCTGAGGCTCCCTAAGACCCTGGCCAGGCTGGACCTCAAGGGCAATGCCATCCAGGACATGGCTGAAAGGGAGCTCAGGGACCTCAAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 72 bp | CTTTCACGTCCGTGCCCTTGGCCTTCAGGACTTCCCTaGCTCGTAGGAGACTGCAAGTGCAGTTCCAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LSRPCPWPSGLP*LVGDCKCSSRD Trigger: ATCCCTGGAACTGCACTTGCAGTCTCCTACGAGCCAGGGAAGTCCTGAAGGCCAAGGGCACGGACGTGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS GCA 72 bp | CCTTCAGGACTTCCCTGGCTCGTAGGAGACTGCAAGTaGAGTTCCAGGGATTCCCATCCAGGTAGAGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSGLPWLVGDCK*SSRDSHPGRDA Trigger: GGCATCTCTACCTGGATGGGAATCCCTGGAACTGCACTTGCAGTCTCCTACGAGCCAGGGAAGTCCTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 72 bp | GCTGTAAGTGATGCTCACATTGCCTCAGGATCTTCTTaGAGGACATCCAGCTCTCCCCCTGTCGCTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVSDAHIASGSS*RTSSSPPVALL Trigger: CAGCAGAGCGACAGGGGGAGAGCTGGATGTCCTCCAAGAAGATCCTGAGGCAATGTGAGCATCACTTACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CAA 72 bp | CCCTCCAGTGCCTTGAAATCTAAGGCCGAGATCCGGTaGTTCCTGAGGTTGAGGACCTGCAGTTGTTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSSALKSKAEIR*FLRLRTCSCLR Trigger: CCTCAAACAACTGCAGGTCCTCAACCTCAGGAACAACCGGATCTCGGCCTTAGATTTCAAGGCACTGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 72 bp | GTTACCATCCACCATCAAACTCTGCAAACTGGCAAGTaGGGAGAGCATGCTGGGAGACAGGGACGAGATCAA | + |
|
Preference number: 6 (lower is better) Translates to: VTIHHQTLQTGK*GEHAGRQGRDQ Trigger: TTGATCTCGTCCCTGTCTCCCAGCATGCTCTCCCCACTTGCCAGTTTGCAGAGTTTGATGGTGGATGGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS CAA 90 bp | TACTTGAGATGCGGAAGGCTCAGAGGTCCAACCACGGACTCTATGTaGTTACCATCCACCATCAAACTCTGCAAACTGGCAAGTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YLRCGRLRGPTTDSM*LPSTIKLCKLASGE Trigger: CTCCCCACTTGCCAGTTTGCAGAGTTTGATGGTGGATGGTAACAACATAGAGTCCGTGGTTGGACCTCTGAGCCTTCCGCATCTCAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS GCA 72 bp | ACGGACTCTATGTTGTTACCATCCACCATCAAACTCTaGAAACTGGCAAGTGGGGAGAGCATGCTGGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TDSMLLPSTIKL*KLASGESMLGD Trigger: GTCTCCCAGCATGCTCTCCCCACTTGCCAGTTTGCAGAGTTTGATGGTGGATGGTAACAACATAGAGTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS CAA 72 bp | TGCGGAAGGCTCAGAGGTCCAACCACGGACTCTATGTaGTTACCATCCACCATCAAACTCTGCAAACTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CGRLRGPTTDSM*LPSTIKLCKLA Trigger: TGCCAGTTTGCAGAGTTTGATGGTGGATGGTAACAACATAGAGTCCGTGGTTGGACCTCTGAGCCTTCCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS CAA 90 bp | GCCTGGGAGGCAACATTTGAAGCTGGTTTTGGGAAACCTCCAGAGTaGTTAAATTGGTCAGCTGCTGTGCCCCATCAATGGAAGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AWEATFEAGFGKPPE*LNWSAAVPHQWKTG Trigger: TCCTGTCTTCCATTGATGGGGCACAGCAGCTGACCAATTTAACAACTCTGGAGGTTTCCCAAAACCAGCTTCAAATGTTGCCTCCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS GCA 72 bp | CTGCATAGAATCACAACTGCATCGTCCTGGACAGTTTaGACTGAGGCCATTGGTAAGAGAGAGCCCCAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LHRITTASSWTV*TEAIGKREPQK Trigger: CTTTTGGGGCTCTCTCTTACCAATGGCCTCAGTGCAAACTGTCCAGGACGATGCAGTTGTGATTCTATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS TCA 72 bp | CTGCTGTGCCCCATCAATGGAAGACAGGAAGTTCTCTaGCAGGTAAAGATGGGACAGGTTCTCCAAGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLCPINGRQEVL*QVKMGQVLQVF Trigger: AAACACTTGGAGAACCTGTCCCATCTTTACCTGTCAGAGAACTTCCTGTCTTCCATTGATGGGGCACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS TCA 72 bp | GAGAACACCTCTGAAGGGCCCCAGCCTCGAACAAGCTaGCAACATTGTTGTCTAGAAACAGATGTTTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ENTSEGPQPRTS*QHCCLETDVSG Trigger: ACCTGAAACATCTGTTTCTAGACAACAATGTTGTCAGCTTGTTCGAGGCTGGGGCCCTTCAGAGGTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 72 bp | GAAGCTGGTTTTGGGAAACCTCCAGAGTTGTTAAATTaGTCAGCTGCTGTGCCCCATCAATGGAAGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: EAGFGKPPELLN*SAAVPHQWKTG Trigger: TCCTGTCTTCCATTGATGGGGCACAGCAGCTGACCAATTTAACAACTCTGGAGGTTTCCCAAAACCAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CAA 90 bp | TTCTGTAGGGAAGTGAAGACATTCCCTGGTATAAGGTGGAGTTGGTaGTTCTCCATGCTCATGTACTTGAGATGCGGAAGGCTCAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FCREVKTFPGIRWSW*FSMLMYLRCGRLRG Trigger: ACCTCTGAGCCTTCCGCATCTCAAGTACATGAGCATGGAGAACAACCAACTCCACCTTATACCAGGGAATGTCTTCACTTCCCTACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS CCA 72 bp | TTGTACAGACTGCATAGAATCACAACTGCATCGTCCTaGACAGTTTGCACTGAGGCCATTGGTAAGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LYRLHRITTASS*TVCTEAIGKRE Trigger: CTCTCTCTTACCAATGGCCTCAGTGCAAACTGTCCAGGACGATGCAGTTGTGATTCTATGCAGTCTGTACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CCA 72 bp | AGGGAAGTGAAGACATTCCCTGGTATAAGGTGGAGTTaGTTGTTCTCCATGCTCATGTACTTGAGATGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: REVKTFPGIRWS*LFSMLMYLRCG Trigger: TCCGCATCTCAAGTACATGAGCATGGAGAACAACCAACTCCACCTTATACCAGGGAATGTCTTCACTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS CAA 72 bp | GAAGTGAAGACATTCCCTGGTATAAGGTGGAGTTGGTaGTTCTCCATGCTCATGTACTTGAGATGCGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: EVKTFPGIRWSW*FSMLMYLRCGR Trigger: CCTTCCGCATCTCAAGTACATGAGCATGGAGAACAACCAACTCCACCTTATACCAGGGAATGTCTTCACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS CAA 72 bp | GCAACATTTGAAGCTGGTTTTGGGAAACCTCCAGAGTaGTTAAATTGGTCAGCTGCTGTGCCCCATCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: ATFEAGFGKPPE*LNWSAAVPHQW Trigger: CCATTGATGGGGCACAGCAGCTGACCAATTTAACAACTCTGGAGGTTTCCCAAAACCAGCTTCAAATGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS TCA 72 bp | TTCTGTAACCTCGATGGTAGCCTGGGAGGCAACATTTaGAGCTGGTTTTGGGAAACCTCCAGAGTTGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: FCNLDGSLGGNI*SWFWETSRVVK Trigger: TTTAACAACTCTGGAGGTTTCCCAAAACCAGCTTCAAATGTTGCCTCCCAGGCTACCATCGAGGTTACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS TCA 72 bp | TCTCGGAGGTCCTGGAATTCTGGTGCTGTCACTCTCTaGATGAAGTTACTGCTACAATCAAGCTTCTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRRSWNSGAVTL*MKLLLQSSFCN Trigger: GTTACAGAAGCTTGATTGTAGCAGTAACTTCATTCAGAGAGTGACAGCACCAGAATTCCAGGACCTCCGAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS GCA 72 bp | TTTTGGGAAACCTCCAGAGTTGTTAAATTGGTCAGCTaGTGTGCCCCATCAATGGAAGACAGGAAGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FWETSRVVKLVS*CAPSMEDRKFS Trigger: AGAGAACTTCCTGTCTTCCATTGATGGGGCACAGCAGCTGACCAATTTAACAACTCTGGAGGTTTCCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067085.7 |
||
| CDS CAA 72 bp | GGGGAGAGCATGCTGGGAGACAGGGACGAGATCAAGTaGTTTTTAAGTTCAAGGACTTTCAAGTTCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GESMLGDRDEIK*FLSSRTFKFFS Trigger: ACTGAAGAACTTGAAAGTCCTTGAACTTAAAAACAACTTGATCTCGTCCCTGTCTCCCAGCATGCTCTCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS CAA 90 bp | TGGGACAGGTTCTCCAAGTGTTTCATATCGCGAAACCTGACCACTTaGAGCTGGTTTCTCTCCATCTTTAAAGATAGCAAGGATTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: WDRFSKCFISRNLTT*SWFLSIFKDSKDLG Trigger: ACCCAAATCCTTGCTATCTTTAAAGATGGAGAGAAACCAGCTCAAAGTGGTCAGGTTTCGCGATATGAAACACTTGGAGAACCTGTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS CCA 72 bp | TTCTGTAGGGAAGTGAAGACATTCCCTGGTATAAGGTaGAGTTGGTTGTTCTCCATGCTCATGTACTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FCREVKTFPGIR*SWLFSMLMYLR Trigger: TCTCAAGTACATGAGCATGGAGAACAACCAACTCCACCTTATACCAGGGAATGTCTTCACTTCCCTACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
||
| CDS CCA 72 bp | AAGTGTTTCATATCGCGAAACCTGACCACTTTGAGCTaGTTTCTCTCCATCTTTAAAGATAGCAAGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: KCFISRNLTTLS*FLSIFKDSKDL Trigger: CAAATCCTTGCTATCTTTAAAGATGGAGAGAAACCAGCTCAAAGTGGTCAGGTTTCGCGATATGAAACACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
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| CDS CAA 72 bp | CATATGGCATTATCATTTAATTTTAACACCTCAAGGTaGGCTGGGAGAGCACTGGGGACTTGTCTCAATTTA | + |
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Preference number: 6 (lower is better) Translates to: HMALSFNFNTSR*AGRALGTCLNL Trigger: TAAATTGAGACAAGTCCCCAGTGCTCTCCCAGCCAACCTTGAGGTGTTAAAATTAAATGATAATGCCATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
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| CDS CAA 72 bp | TTCCAAAGTTCTAGAGTCTTTAGTGTACTCAGAGTTTaGAAGGTGTCATTTTCAATAGACTCTGTTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: FQSSRVFSVLRV*KVSFSIDSVPL Trigger: CAGTGGAACAGAGTCTATTGAAAATGACACCTTCAAAACTCTGAGTACACTAAAGACTCTAGAACTTTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
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| CDS CAA 90 bp | AATTTATTTTTCCAAAGTTCTAGAGTCTTTAGTGTACTCAGAGTTTaGAAGGTGTCATTTTCAATAGACTCTGTTCCACTGGCCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: NLFFQSSRVFSVLRV*KVSFSIDSVPLASR Trigger: TCTGCTGGCCAGTGGAACAGAGTCTATTGAAAATGACACCTTCAAAACTCTGAGTACACTAAAGACTCTAGAACTTTGGAAAAATAAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067085.7 ENSMUST00000219730.2 |
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