Pregenerated sensors for NEMP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040195Ensembl transcript IDs: ENSMUST00000048099.5, ENSMUST00000118612.8, ENSMUST00000118728.8
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCATCAAGACCCCCACTCCTGGAACCAGCTTCTGGATCGATGATTaGTGGCACACAGCGCTCATGGCTCCAGTGTCCAGCTCACTCCAC | + |
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Preference number: 1 (lower is better) Translates to: TIKTPTPGTSFWIDD*WHTALMAPVSSSLH Trigger: GTGGAGTGAGCTGGACACTGGAGCCATGAGCGCTGTGTGCCAGCAATCATCGATCCAGAAGCTGGTTCCAGGAGTGGGGGTCTTGATGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR GCA 90 bp | AGGGGAGAGCTCCGTACACCTGCCCCTGTCCTCTCAGCATGCAAATaGAGGCACCCATCTTGGACCCGAGTCCATGGGAATACTAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: RGELRTPAPVLSACK*RHPSWTRVHGNTRR Trigger: CCTTCTAGTATTCCCATGGACTCGGGTCCAAGATGGGTGCCTGCATTTGCATGCTGAGAGGACAGGGGCAGGTGTACGGAGCTCTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR GCA 90 bp | AAAGTGCAAGGCTACTCTGTGTGCTTCTCCCTTGGTTTCAGTGCCTaGCTAAGGGGAGAGCTCCGTACACCTGCCCCTGTCCTCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: KVQGYSVCFSLGFSA*LRGELRTPAPVLSA Trigger: TGCTGAGAGGACAGGGGCAGGTGTACGGAGCTCTCCCCTTAGGCAGGCACTGAAACCAAGGGAGAAGCACACAGAGTAGCCTTGCACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR CCA 90 bp | ATCAAGACCCCCACTCCTGGAACCAGCTTCTGGATCGATGATTGCTaGCACACAGCGCTCATGGCTCCAGTGTCCAGCTCACTCCACTTC | + |
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Preference number: 1 (lower is better) Translates to: IKTPTPGTSFWIDDC*HTALMAPVSSSLHF Trigger: GAAGTGGAGTGAGCTGGACACTGGAGCCATGAGCGCTGTGTGCCAGCAATCATCGATCCAGAAGCTGGTTCCAGGAGTGGGGGTCTTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR TCA 90 bp | CAATACCATCAAGACCCCCACTCCTGGAACCAGCTTCTGGATCGATaGTTGCTGGCACACAGCGCTCATGGCTCCAGTGTCCAGCTCACT | + |
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Preference number: 1 (lower is better) Translates to: QYHQDPHSWNQLLDR*LLAHSAHGSSVQLT Trigger: AGTGAGCTGGACACTGGAGCCATGAGCGCTGTGTGCCAGCAATCATCGATCCAGAAGCTGGTTCCAGGAGTGGGGGTCTTGATGGTATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR CCA 90 bp | TGCATTTCCAATACCATCAAGACCCCCACTCCTGGAACCAGCTTCTaGATCGATGATTGCTGGCACACAGCGCTCATGGCTCCAGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: CISNTIKTPTPGTSF*IDDCWHTALMAPVS Trigger: GGACACTGGAGCCATGAGCGCTGTGTGCCAGCAATCATCGATCCAGAAGCTGGTTCCAGGAGTGGGGGTCTTGATGGTATTGGAAATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR GCA 90 bp | GTGGCCAGCCTGCACCCCCAGGACAAGCACTTACTGCCTCTGAGGTaGATTCCCACCTCTTCAGGATCTTCAAGTTCTTTGAAAAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: VASLHPQDKHLLPLR*IPTSSGSSSSLKRD Trigger: GTCTCTTTTCAAAGAACTTGAAGATCCTGAAGAGGTGGGAATGCACCTCAGAGGCAGTAAGTGCTTGTCCTGGGGGTGCAGGCTGGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR CCA 90 bp | ATTCCAGCAGAACTCCTGCACCCGCTCCAGGCTCTTATAAAAGCCTaGGAGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACC | + |
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Preference number: 1 (lower is better) Translates to: IPAELLHPLQALIKA*ENHTALTMWPHQGT Trigger: GGTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGCCTGGAGCGGGTGCAGGAGTTCTGCTGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| 3UTR TCA 90 bp | AGGATACACAGCATACAAAAGAGGCACCGTCTGTCCTTCACTGTCTaGAGCAGCTCTCTCAGCATTCACTTCTCCAACTACCAGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: RIHSIQKRHRLSFTV*SSSLSIHFSNYQAG Trigger: CCCTGCCTGGTAGTTGGAGAAGTGAATGCTGAGAGAGCTGCTTCAGACAGTGAAGGACAGACGGTGCCTCTTTTGTATGCTGTGTATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR GCA 90 bp | GCACAAACATTTAGACACACTTGTAAAGTGCAAGGCTACTCTGTGTaGTTCTCCCTTGGTTTCAGTGCCTGCCTAAGGGGAGAGCTCCGT | + |
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Preference number: 1 (lower is better) Translates to: AQTFRHTCKVQGYSV*FSLGFSACLRGELR Trigger: ACGGAGCTCTCCCCTTAGGCAGGCACTGAAACCAAGGGAGAAGCACACAGAGTAGCCTTGCACTTTACAAGTGTGTCTAAATGTTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR TCA 90 bp | GCAGCAGACGTTCTCCTAAATGCAAGCAAACTAAAAATCAGACTGTaGGCATTCAAGGCTCAACAGCAGCAGCTCCAGGGGTTTCACAGG | + |
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Preference number: 1 (lower is better) Translates to: AADVLLNASKLKIRL*AFKAQQQQLQGFHR Trigger: CCTGTGAAACCCCTGGAGCTGCTGCTGTTGAGCCTTGAATGCTCACAGTCTGATTTTTAGTTTGCTTGCATTTAGGAGAACGTCTGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR TCA 90 bp | GGTAGGCTAAAGAGAACACAACTGATTCACAGAGGGCTATGCCCTTaGATGGGCGGTCATATGGTAAAATGGAACAGTGGGACCCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: GRLKRTQLIHRGLCP*MGGHMVKWNSGTQR Trigger: TCTTTGGGTCCCACTGTTCCATTTTACCATATGACCGCCCATTCAAGGGCATAGCCCTCTGTGAATCAGTTGTGTTCTCTTTAGCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR CCA 90 bp | GAGATAAGAGCATGTCAAAGAAAAATGACACATGGAAGACACTTGTaGCCCAAAGCCCCATGTCTGAGTCTATGTGACCACTTCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: EIRACQRKMTHGRHL*PKAPCLSLCDHFCP Trigger: GGGACAGAAGTGGTCACATAGACTCAGACATGGGGCTTTGGGCCACAAGTGTCTTCCATGTGTCATTTTTCTTTGACATGCTCTTATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR CCA 90 bp | CAACAATTATGTAACCCGTCCAAATTCTTCACGGGTATCAAGGCCTaGGGGAATTCTCTGGCCTATTTGGGTCCTTTTATTCACCAAACC | + |
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Preference number: 1 (lower is better) Translates to: QQLCNPSKFFTGIKA*GNSLAYLGPFIHQT Trigger: GGTTTGGTGAATAAAAGGACCCAAATAGGCCAGAGAATTCCCCCAGGCCTTGATACCCGTGAAGAATTTGGACGGGTTACATAATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR CCA 90 bp | GAAATAACTAACTGGCCACCTGGAGAGGTGTCTCAGCTGACATTTTaGATGCTAGCAGTAAAGCCCAGGGTCTTCCAAAATTACATGTTA | + |
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Preference number: 1 (lower is better) Translates to: EITNWPPGEVSQLTF*MLAVKPRVFQNYML Trigger: TAACATGTAATTTTGGAAGACCCTGGGCTTTACTGCTAGCATCCAAAATGTCAGCTGAGACACCTCTCCAGGTGGCCAGTTAGTTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR CCA 90 bp | CATCTCAGACAAAACCACCCTCTGCTGAGAAAACAAGAATGTGGGTaGGGAACTGGCTCTTTCTCATTTCAAGGTAACCAAGTTATCAAA | + |
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Preference number: 1 (lower is better) Translates to: HLRQNHPLLRKQECG*GTGSFSFQGNQVIK Trigger: TTTGATAACTTGGTTACCTTGAAATGAGAAAGAGCCAGTTCCCCACCCACATTCTTGTTTTCTCAGCAGAGGGTGGTTTTGTCTGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR TCA 90 bp | AATGGAGCAGCCATGGCCATTTCAGAATCCAGGGCCACTCCATATTaGCTTTTCCAAGAATACCATGCTATGAATTACATCTCAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: NGAAMAISESRATPY*LFQEYHAMNYISNK Trigger: TTTATTTGAGATGTAATTCATAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAAATGGCCATGGCTGCTCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCACTGTCTGAAGCAGCTCTCTCAGCATTCACTTCTCCAACTACCAGGCAGTGCCGCAGCCCTCAGTaGCTCCGCCACTCTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: PSLSEAALSAFTSPTTRQCRSPQ*LRHSFL Trigger: GAGGAAAGAGTGGCGGAGGCACTGAGGGCTGCGGCA...CTGCCTGGTAGTTGGAGAAGTGAATGCTGAGAGAGCTGCTTCAGACAGTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR TCA 90 bp | CCTTCACTGTCTGAAGCAGCTCTCTCAGCATTCACTTCTCCAACTACCAGGCAGGCAGAGGCATCTCTGTaGGTTCCAGGCCAATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PSLSEAALSAFTSPTTRQAEASL*VPGQCA Trigger: AGCACATTGGCCTGGAACTCACAGAGATGCCTCTGC...CTGCCTGGTAGTTGGAGAAGTGAATGCTGAGAGAGCTGCTTCAGACAGTGAAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGGACCCAAAGAGCCATCTCAGACAAAACCACCCTCTGCTGAGAAAACAAGGGATGAGACTGAGCTaGCTCAAGCAGTGTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QWDPKSHLRQNHPLLRKQGMRLS*LKQCLG Trigger: GCCCAGACACTGCTTGAGTCAGCTCAGTCTCATCCC...TTGTTTTCTCAGCAGAGGGTGGTTTTGTCTGAGATGGCTCTTTGGGTCCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCAAGGATACACAGCATACAAAAGAGGCACCGTCTGTCCTTCACTGTCTGTTACTGCCTCTGAGGTaGATTCCCACCTCTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QAKDTQHTKEAPSVLHCLLLPLR*IPTSSG Trigger: TCCTGAAGAGGTGGGAATGCACCTCAGAGGCAGTAA...CAGACAGTGAAGGACAGACGGTGCCTCTTTTGTATGCTGTGTATCCTTGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCCCCTGTCCTCTCAGCATGCAAATGCAGGCACCCATCTTGGACCCGAGTCTCTGGAGCACTTATTaGGTAAAGAACATGACTTTC | + |
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Preference number: 2 (lower is better) Translates to: TCPCPLSMQMQAPILDPSLWSTY*VKNMTF Trigger: GAAAGTCATGTTCTTTACCCAATAAGTGCTCCAGAG...ACTCGGGTCCAAGATGGGTGCCTGCATTTGCATGCTGAGAGGACAGGGGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGGGGGAATTCTCTGGCCTATTTGGGTCCTTTTATTCACCAAACCTCAAGACTCAAGCAGTGTCTaGGCACGCAGAGGCTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: RPGGILWPIWVLLFTKPQDSSSV*ARRGSE Trigger: TTCTGAGCCTCTGCGTGCCCAGACACTGCTTGAGTC...TTGAGGTTTGGTGAATAAAAGGACCCAAATAGGCCAGAGAATTCCCCCAGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGTACCACTCAGTCCACAAGAGCTGTGGGCACAGCTAAGGTCCATTTTAACTCAAGACCCCCACTCCTaGAACCAGCTTCTGGATCGA | + |
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Preference number: 2 (lower is better) Translates to: LVPLSPQELWAQLRSILTQDPHS*NQLLDR Trigger: TCGATCCAGAAGCTGGTTCCAGGAGTGGGGGTCTTG...AGTTAAAATGGACCTTAGCTGTGCCCACAGCTCTTGTGGACTGAGTGGTACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGGACCCAAAGAGCCATCTCAGACAAAACCACCCTCTGCTGAGAAAACAAACCATCCGTAAGGAGTaGTTTGGGGAAACAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: QWDPKSHLRQNHPLLRKQTIRKE*FGETGM Trigger: CATGCCTGTTTCCCCAAATCACTCCTTACGGATGGT...TTGTTTTCTCAGCAGAGGGTGGTTTTGTCTGAGATGGCTCTTTGGGTCCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR GCA 90 bp | GGTATCCATATGCTTTGCTTATTCCCAGTGGGTTCTAGGGCCTGCCATGTATGGGCAAAGTGGGCCAAGTaGTCAAATGTCAGAAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: GIHMLCLFPVGSRACHVWAKWAK*SNVRSE Trigger: CTCGCTTCTGACATTTGAGCACTTGGCCCACTTTGC...CCATACATGGCAGGCCCTAGAACCCACTGGGAATAAGCAAAGCATATGGATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR GCA 90 bp | CCTTCACTGTCTGAAGCAGCTCTCTCAGCATTCACTTCTCCAACTACCAGGCAGCGACAGCAAGGGCTATaGAGAGAAAATGTGTCTCGA | + |
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Preference number: 2 (lower is better) Translates to: PSLSEAALSAFTSPTTRQRQQGL*RENVSR Trigger: TCGAGACACATTTTCTCTGCATAGCCCTTGCTGTCG...CTGCCTGGTAGTTGGAGAAGTGAATGCTGAGAGAGCTGCTTCAGACAGTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR GCA 90 bp | AACCTCCTTTTCGAGGTAGTCACCATCTGGTCTCCAACAGCAACAGAATCCATACTTGGTTTCAGTGCCTaGCTAAGGGGAGAGCTCCGT | + |
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Preference number: 2 (lower is better) Translates to: NLLFEVVTIWSPTATESILGFSA*LRGELR Trigger: ACGGAGCTCTCCCCTTAGGCAGGCACTGAAACCAAG...TATGGATTCTGTTGCTGTTGGAGACCAGATGGTGACTACCTCGAAAAGGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGTACCACTCAGTCCACAAGAGCTGTGGGCACAGCTAAGGTCCATTTTAACTAGTGGTAACATACTTTaGCAGAGGCAGAGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LVPLSPQELWAQLRSILTSGNIL*QRQRQR Trigger: CCTCTGCCTCTGCCTCTGCCAAAGTATGTTACCACT...AGTTAAAATGGACCTTAGCTGTGCCCACAGCTCTTGTGGACTGAGTGGTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR TCA 90 bp | AACCTCCTTTTCGAGGTAGTCACCATCTGGTCTCCAACAGCAACAGAATCCATACTGTCCTTCACTGTCTaGAGCAGCTCTCTCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: NLLFEVVTIWSPTATESILSFTV*SSSLSI Trigger: AATGCTGAGAGAGCTGCTTCAGACAGTGAAGGACAG...TATGGATTCTGTTGCTGTTGGAGACCAGATGGTGACTACCTCGAAAAGGAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCTGTCACAGTGACAGAGTTGCCAGAACTCAGCAAACTTTTAAACAGGAGTCAGGAACCGCAAAGTaGGCCAAGTGCTCAAATGTC | + |
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Preference number: 2 (lower is better) Translates to: RVCHSDRVARTQQTFKQESGTAK*AKCSNV Trigger: GACATTTGAGCACTTGGCCCACTTTGCGGTTCCTGA...CTCCTGTTTAAAAGTTTGCTGAGTTCTGGCAACTCTGTCACTGTGACAGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTTCAGAATCCAGGGCCACTCCATATTGACTTTTCCAAGAATACCATGCTAAGAAAGGAACAAGGGTaGGAGCAGGTGACATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PFQNPGPLHIDFSKNTMLRKEQG*EQVTSH Trigger: GTGGGATGTCACCTGCTCCCACCCTTGTTCCTTTCT...TAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTAGAGCAAGTTCTACGACAGCAAGGGCTATGCAGAGAAAATGTGTCTCGGCTCTTATAAAAGCCTaGGAGAATCACACAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: LSRASSTTARAMQRKCVSALIKA*ENHTAL Trigger: AAGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGC...CGAGACACATTTTCTCTGCATAGCCCTTGCTGTCGTAGAACTTGCTCTAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | AAGAAATTTGACATGCCAGCCAGTGGTAACATACTTTGGCAGAGGCAGAGGCAGGTAGGGTTTGTACTCTaGAGCACTTATTGGGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: KKFDMPASGNILWQRQRQVGFVL*STYWVK Trigger: CTTTACCCAATAAGTGCTCCAGAGTACAAACCCTAC...CTGCCTCTGCCTCTGCCAAAGTATGTTACCACTGGCTGGCATGTCAAATTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR TCA 90 bp | GTAATAAATAAATTGAATTCCAGGACAGCCTGGGCTACAGAGTGGTGCCCTATCGGGAGTCATGTTTTATaGACTCAGGTCAGACCCATT | + |
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Preference number: 2 (lower is better) Translates to: VINKLNSRTAWATEWCPIGSHVL*TQVRPI Trigger: AATGGGTCTGACCTGAGTTCATAAAACATGACTCCC...GATAGGGCACCACTCTGTAGCCCAGGCTGTCCTGGAATTCAATTTATTTATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCTGTCACAGTGACAGAGTTGCCAGAACTCAGCAAACTTTTAAACAGGAGGCTCTTATAAAAGCCTaGGAGAATCACACAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: RVCHSDRVARTQQTFKQEALIKA*ENHTAL Trigger: AAGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGC...CTCCTGTTTAAAAGTTTGCTGAGTTCTGGCAACTCTGTCACTGTGACAGACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| 3UTR-3UTR CCA 90 bp | CGTTCTCCTAAATGCAAGCAAACTAAAAATCAGACTGTGAGCATTCAAGGCTCATCAGGAACCGCAAAGTaGGCCAAGTGCTCAAATGTC | + |
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Preference number: 2 (lower is better) Translates to: RSPKCKQTKNQTVSIQGSSGTAK*AKCSNV Trigger: GACATTTGAGCACTTGGCCCACTTTGCGGTTCCTGA...TGAGCCTTGAATGCTCACAGTCTGATTTTTAGTTTGCTTGCATTTAGGAGAACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | AACCTCCTTTTCGAGGTAGTCACCATCTGGTCTCCAACAGCAACAGAATCCATAGGTCATATGGTAAAATaGAACAGTGGGACCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: NLLFEVVTIWSPTATESIGHMVK*NSGTQR Trigger: TCTTTGGGTCCCACTGTTCCATTTTACCATATGACC...TATGGATTCTGTTGCTGTTGGAGACCAGATGGTGACTACCTCGAAAAGGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR TCA 90 bp | AAGAAATCTGTCTTTCACAGTGAGTCAACCCACAGAAGAGCAAAGTCACTTACATCTGTCCCTCGTAAATaGTCCTGCCAGCTTCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: KKSVFHSESTHRRAKSLTSVPRK*SCQLLR Trigger: TCTTAGAAGCTGGCAGGATCATTTACGAGGGACAGA...TGTAAGTGACTTTGCTCTTCTGTGGGTTGACTCACTGTGAAAGACAGATTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCCTTCACTGTCTGAAGCAGCTCTCTCAGCATTCACTTCTCCAACTACCAAAAATGAGCTTGCTTTaGTCGCCCCAAATTCAAATA | + |
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Preference number: 2 (lower is better) Translates to: SVLHCLKQLSQHSLLQLPKMSLL*SPQIQI Trigger: TATTTGAATTTGGGGCGAGCAAAGCAAGCTCATTTT...TGGTAGTTGGAGAAGTGAATGCTGAGAGAGCTGCTTCAGACAGTGAAGGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCTCCAACAGCAACAGAATCCATAATCGAGTCACGAAGATGCCACTGGGTGACAATTTAAGGCTATaGGGAACATTGGTTGAAATA | + |
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Preference number: 2 (lower is better) Translates to: LVSNSNRIHNRVTKMPLGDNLRL*GTLVEI Trigger: TATTTCAACCAATGTTCCCCATAGCCTTAAATTGTC...ACCCAGTGGCATCTTCGTGACTCGATTATGGATTCTGTTGCTGTTGGAGACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR GCA 90 bp | GTAATAAATAAATTGAATTCCAGGACAGCCTGGGCTACAGAGTGGTGCCCTATCACAAGAAATTTGACATaGCAGCCAGTGGTAACATAC | + |
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Preference number: 2 (lower is better) Translates to: VINKLNSRTAWATEWCPITRNLT*QPVVTY Trigger: GTATGTTACCACTGGCTGGCATGTCAAATTTCTTGT...GATAGGGCACCACTCTGTAGCCCAGGCTGTCCTGGAATTCAATTTATTTATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR-3UTR CCA 90 bp | AAGAAATCTGTCTTTCACAGTGAGTCAACCCACAGAAGAGCAAAGTCACTTACACACACCATTCCTGAGTaGGAAAAGTCAATGGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: KKSVFHSESTHRRAKSLTHTIPE*EKSMVR Trigger: TCTCACCATTGACTTTTCCCACTCAGGAATGGTGTG...TGTAAGTGACTTTGCTCTTCTGTGGGTTGACTCACTGTGAAAGACAGATTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR CAA 90 bp | ACACAAATGTGGAAGACTCACAGCAAACAGACATCCCTGAAAACTTaGTTCTTTCTGAACATTCCTTACCATGTATTAAGTATCAATGAC | + |
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Preference number: 2 (lower is better) Translates to: TQMWKTHSKQTSLKT*FFLNIPYHVLSIND Trigger: GTCATTGATACTTAATACATGGTAAGGAATGTTCAGAAAGAACAAAGTTTTCAGGGATGTCTGTTTGCTGTGAGTCTTCCACATTTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| 3UTR GCA 72 bp | GCTCAAATGTCAGAAGCGAGCTGCCGCAGCCCTCAGTaGCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: AQMSEASCRSPQ*LRHSFLEEDQP Trigger: AGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTGAGGGCTGCGGCAGCTCGCTTCTGACATTTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| 3UTR GCA 72 bp | CAAAGTGGGCCAAGTGCTCAAATGTCAGAAGCGAGCTaGCGCAGCCCTCAGTGCCTCCGCCACTCTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QSGPSAQMSEAS*RSPQCLRHSFL Trigger: GAGGAAAGAGTGGCGGAGGCACTGAGGGCTGCGGCAGCTCGCTTCTGACATTTGAGCACTTGGCCCACTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| 3UTR GCA 72 bp | ACCCCCACTCCTGGAACCAGCTTCTGGATCGATGATTaGTGGCACACAGCGCTCATGGCTCCAGTGTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TPTPGTSFWIDD*WHTALMAPVSS Trigger: GCTGGACACTGGAGCCATGAGCGCTGTGTGCCAGCAATCATCGATCCAGAAGCTGGTTCCAGGAGTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR GCA 72 bp | GGCTACTCTGTGTGCTTCTCCCTTGGTTTCAGTGCCTaGCTAAGGGGAGAGCTCCGTACACCTGCCCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GYSVCFSLGFSA*LRGELRTPAPV Trigger: GACAGGGGCAGGTGTACGGAGCTCTCCCCTTAGGCAGGCACTGAAACCAAGGGAGAAGCACACAGAGTAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | CAAGACCCCCACTCCTGGAACCAGCTTCTGGATCGATaGTTGCTGGCACACAGCGCTCATGGCTCCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QDPHSWNQLLDR*LLAHSAHGSSV Trigger: GACACTGGAGCCATGAGCGCTGTGTGCCAGCAATCATCGATCCAGAAGCTGGTTCCAGGAGTGGGGGTCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR GCA 72 bp | CTCCGTACACCTGCCCCTGTCCTCTCAGCATGCAAATaGAGGCACCCATCTTGGACCCGAGTCCATGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRTPAPVLSACK*RHPSWTRVHGN Trigger: ATTCCCATGGACTCGGGTCCAAGATGGGTGCCTGCATTTGCATGCTGAGAGGACAGGGGCAGGTGTACGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CCA 72 bp | CCCACTCCTGGAACCAGCTTCTGGATCGATGATTGCTaGCACACAGCGCTCATGGCTCCAGTGTCCAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PTPGTSFWIDDC*HTALMAPVSSS Trigger: TGAGCTGGACACTGGAGCCATGAGCGCTGTGTGCCAGCAATCATCGATCCAGAAGCTGGTTCCAGGAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | CCAGCCTGCACCCCCAGGACAAGCACTTACTGCCTCTaGGGTGCATTCCCACCTCTTCAGGATCTTCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PACTPRTSTYCL*GAFPPLQDLQV Trigger: AACTTGAAGATCCTGAAGAGGTGGGAATGCACCTCAGAGGCAGTAAGTGCTTGTCCTGGGGGTGCAGGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | CACATGGAAGACACTTGTGGCCCAAAGCCCCATGTCTaGGTCTATGTGACCACTTCTGTCCCCGCTGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HMEDTCGPKPHV*VYVTTSVPAEV Trigger: AACCTCAGCGGGGACAGAAGTGGTCACATAGACTCAGACATGGGGCTTTGGGCCACAAGTGTCTTCCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CCA 72 bp | AATACCATCAAGACCCCCACTCCTGGAACCAGCTTCTaGATCGATGATTGCTGGCACACAGCGCTCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NTIKTPTPGTSF*IDDCWHTALMA Trigger: AGCCATGAGCGCTGTGTGCCAGCAATCATCGATCCAGAAGCTGGTTCCAGGAGTGGGGGTCTTGATGGTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR GCA 72 bp | AGAGGCAGAGGCATCTCTGTGAGTTCCAGGCCAATGTaGTCTCTAGAGCAAGTTCTACGACAGCAAGGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RGRGISVSSRPM*SLEQVLRQQGL Trigger: TAGCCCTTGCTGTCGTAGAACTTGCTCTAGAGAGCACATTGGCCTGGAACTCACAGAGATGCCTCTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR GCA 72 bp | CTGCACCCCCAGGACAAGCACTTACTGCCTCTGAGGTaGATTCCCACCTCTTCAGGATCTTCAAGTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LHPQDKHLLPLR*IPTSSGSSSSL Trigger: CAAAGAACTTGAAGATCCTGAAGAGGTGGGAATGCACCTCAGAGGCAGTAAGTGCTTGTCCTGGGGGTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CCA 72 bp | AAGAAATTTGACATGCCAGCCAGTGGTAACATACTTTaGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KKFDMPASGNIL*QRQRQRQRQRQ Trigger: CTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCAAAGTATGTTACCACTGGCTGGCATGTCAAATTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CCA 72 bp | CTGTTATTTCAGGAACAGTCCCACAGACATGGAGAGTaGCCAGCTCAGGTTGTAACTGGCTCAAGGCTCACG | + |
|
Preference number: 3 (lower is better) Translates to: LLFQEQSHRHGE*PAQVVTGSRLT Trigger: CGTGAGCCTTGAGCCAGTTACAACCTGAGCTGGCCACTCTCCATGTCTGTGGGACTGTTCCTGAAATAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | TCTAGCAGTGTAAAGGCGAAGGTGAAAGGATCAACCTaGGGTACAGCAGCAGGCCCCAACCCAGAAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSVKAKVKGST*GTAAGPNPEGK Trigger: TTTTCCTTCTGGGTTGGGGCCTGCTGCTGTACCTCAGGTTGATCCTTTCACCTTCGCCTTTACACTGCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR GCA 72 bp | CTGTCCCCGCTGAGGTTAAAGGGTATCCATATGCTTTaGTTATTCCCAGTGGGTTCTAGGGCCTGCCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSPLRLKGIHML*LFPVGSRACHV Trigger: TACATGGCAGGCCCTAGAACCCACTGGGAATAAGCAAAGCATATGGATACCCTTTAACCTCAGCGGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CCA 72 bp | TCTGATGCTGTATTCCTGAGTGAGCACCGACCTCCCTaGCTGAAGGAATTACACACATTACACACTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SDAVFLSEHRPP*LKELHTLHTSS Trigger: GGAGGAAGTGTGTAATGTGTGTAATTCCTTCAGCCAGGGAGGTCGGTGCTCACTCAGGAATACAGCATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CCA 72 bp | GCAACAGAATCCATAATCGAGTCACGAAGATGCCACTaGGTTAGCTCTGGGTTAGCTCAACTGCCTACGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ATESIIESRRCH*VSSGLAQLPTF Trigger: GAACGTAGGCAGTTGAGCTAACCCAGAGCTAACCCAGTGGCATCTTCGTGACTCGATTATGGATTCTGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | TGTGCACACTCTACAGGAAAGGGGACACACCATTCCTaGGTGGGAAAAGTCAATGGTGAGAAACGGCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CAHSTGKGTHHS*VGKVNGEKRQE Trigger: TTCTTGCCGTTTCTCACCATTGACTTTTCCCACTCAGGAATGGTGTGTCCCCTTTCCTGTAGAGTGTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR GCA 72 bp | TTTAGACACACTTGTAAAGTGCAAGGCTACTCTGTGTaGTTCTCCCTTGGTTTCAGTGCCTGCCTAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FRHTCKVQGYSV*FSLGFSACLRG Trigger: TCCCCTTAGGCAGGCACTGAAACCAAGGGAGAAGCACACAGAGTAGCCTTGCACTTTACAAGTGTGTCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR GCA 72 bp | TCAGGTCCTCACTCTGAAGGTACTGTTTTGATTACCTaGAATGGAGCAGCCATGGCCATTTCAGAATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGPHSEGTVLIT*NGAAMAISESR Trigger: CCTGGATTCTGAAATGGCCATGGCTGCTCCATTGCAGGTAATCAAAACAGTACCTTCAGAGTGAGGACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| 3UTR CCA 72 bp | ACACTTCAACTTGTACCACTCAGTCCACAAGAGCTGTaGGCACAGCTAAGGTCCATTTTAACTCTGGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: TLQLVPLSPQEL*AQLRSILTLGS Trigger: GGATCCCAGAGTTAAAATGGACCTTAGCTGTGCCCACAGCTCTTGTGGACTGAGTGGTACAAGTTGAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | GTTCTCCTAAATGCAAGCAAACTAAAAATCAGACTGTaGGCATTCAAGGCTCAACAGCAGCAGCTCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VLLNASKLKIRL*AFKAQQQQLQG Trigger: CCCCTGGAGCTGCTGCTGTTGAGCCTTGAATGCTCACAGTCTGATTTTTAGTTTGCTTGCATTTAGGAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | TATCTCAACAGAGAAAGGAACAAGGGTGGGAGCAGGTaGCATCCCACTTACAGAGGTTCCCAAGGAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: YLNRERNKGGSR*HPTYRGSQGKT Trigger: AGTTTTTCCTTGGGAACCTCTGTAAGTGGGATGTCACCTGCTCCCACCCTTGTTCCTTTCTCTGTTGAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| 3UTR CCA 72 bp | GCATGTCAAAGAAAAATGACACATGGAAGACACTTGTaGCCCAAAGCCCCATGTCTGAGTCTATGTGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: ACQRKMTHGRHL*PKAPCLSLCDH Trigger: GTGGTCACATAGACTCAGACATGGGGCTTTGGGCCACAAGTGTCTTCCATGTGTCATTTTTCTTTGACATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTCCTTCACTGTCTGAAGCAGCTCTCTCAGCATTCACTTCTCCAACTACCAAGATGCAGCCTCCATTaGAATGCATTACTGCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: SVLHCLKQLSQHSLLQLPRCSLH*NALLHL Trigger: TAAGTGCAGTAATGCATTCAAATGGAGGCTGCATCT...TGGTAGTTGGAGAAGTGAATGCTGAGAGAGCTGCTTCAGACAGTGAAGGACAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CCA 72 bp | CAAAACCACCCTCTGCTGAGAAAACAAGAATGTGGGTaGGGAACTGGCTCTTTCTCATTTCAAGGTAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: QNHPLLRKQECG*GTGSFSFQGNQ Trigger: TTGGTTACCTTGAAATGAGAAAGAGCCAGTTCCCCACCCACATTCTTGTTTTCTCAGCAGAGGGTGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR GCA 72 bp | GTCCATGGGAATACTAGAAGGCATTATTTTCCTGTCTaGACACTTCAACTTGTACCACTCAGTCCACAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VHGNTRRHYFPV*TLQLVPLSPQE Trigger: CTCTTGTGGACTGAGTGGTACAAGTTGAAGTGTGCAGACAGGAAAATAATGCCTTCTAGTATTCCCATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | GCCATGGCCATTTCAGAATCCAGGGCCACTCCATATTaGCTTTTCCAAGAATACCATGCTATGAATTACATC | + |
|
Preference number: 3 (lower is better) Translates to: AMAISESRATPY*LFQEYHAMNYI Trigger: GATGTAATTCATAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAAATGGCCATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| 3UTR GCA 72 bp | GACTACAAGCACAAACATTTAGACACACTTGTAAAGTaGAAGGCTACTCTGTGTGCTTCTCCCTTGGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: DYKHKHLDTLVK*KATLCASPLVS Trigger: TGAAACCAAGGGAGAAGCACACAGAGTAGCCTTGCACTTTACAAGTGTGTCTAAATGTTTGTGCTTGTAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR-3UTR CAA 90 bp | GTAATAAATAAATTGAATTCCAGGACAGCCTGGGCTACAGAGTGGTGCCCTATCACTCTGGAGCACTTATaGGGTAAAGAACATGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: VINKLNSRTAWATEWCPITLEHL*GKEHDF Trigger: AAAGTCATGTTCTTTACCCAATAAGTGCTCCAGAGT...GATAGGGCACCACTCTGTAGCCCAGGCTGTCCTGGAATTCAATTTATTTATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | GCCTCTTATGTTCCCATTAACGGGAGTCATGTTTTATaGACTCAGGTCAGACCCATTAGAAGCAATGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: ASYVPINGSHVL*TQVRPIRSNAF Trigger: AAATGCATTGCTTCTAATGGGTCTGACCTGAGTTCATAAAACATGACTCCCGTTAATGGGAACATAAGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR TCA 72 bp | GTGAGTCAACCCACAGAAGAGCAAAGTCACTTACAGTaGATTCTCATTAAAATAAGAAGTCAAGAGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VSQPTEEQSHLQ*ILIKIRSQEPP Trigger: AGGAGGCTCTTGACTTCTTATTTTAATGAGAATTCACTGTAAGTGACTTTGCTCTTCTGTGGGTTGACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR GCA 72 bp | AGACAAAAAGGTTCCGTTACAAAGTTTCTTATACCCTaGAGCTCTAACCACAGCTCAGATACTGCTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: RQKGSVTKFLIP*SSNHSSDTAHF Trigger: AAAATGAGCAGTATCTGAGCTGTGGTTAGAGCTGCAGGGTATAAGAAACTTTGTAACGGAACCTTTTTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CCA 72 bp | GGTAATAAATATCTGGGGTCAGTAGGGTTTGTACTCTaGAGCACTTATTGGGTAAAGAACATGACTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GNKYLGSVGFVL*STYWVKNMTFL Trigger: CAAGAAAGTCATGTTCTTTACCCAATAAGTGCTCCAGAGTACAAACCCTACTGACCCCAGATATTTATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR TCA 90 bp | GCCCTCAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACAGGATACTGGAATACATaGGTCCCAGGCCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSASATLSSKRTSLRYTGYWNT*VPGPAA Trigger: AGCTGCTGGGCCTGGGACTCATGTATTCCAGTATCC...TGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTGAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTCTCCAACAGCAACAGAATCCATAATCGAGTCACGAAGATGCCACTGGGTCCCAGGCCCAGCAGCTaGAGCGTCCAGGTCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSNSNRIHNRVTKMPLGPRPSS*SVQVSR Trigger: CCTGCTGACCTGGACGCTGCAGCTGCTGGGCCTGGG...ACCCAGTGGCATCTTCGTGACTCGATTATGGATTCTGTTGCTGTTGGAGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGACATCCCACTTACAGAGGTTCCCAAGGAAAAACTAAGCATCCTTTCGCCCAGGCCCAGCAGCTaGAGCGTCCAGGTCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGDIPLTEVPKEKLSILSPRPSS*SVQVSR Trigger: CCTGCTGACCTGGACGCTGCAGCTGCTGGGCCTGGG...CGAAAGGATGCTTAGTTTTTCCTTGGGAACCTCTGTAAGTGGGATGTCACCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| CDS-3UTR GCA 90 bp | GAGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACCATGCCAGTCTATCCCAGGCCCAGCAGCTaGAGCGTCCAGGTCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENHTALTMWPHQGTMPVYPRPSS*SVQVSR Trigger: CCTGCTGACCTGGACGCTGCAGCTGCTGGGCCTGGG...ATAGACTGGCATGGTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTATTATCTCAACAGAGAAAGGAACAAGGGTGGGAGCAGGTGACATCCCACCCAGCACCGGGGCCCTaGACCAACCGCCGACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KVLSQQRKEQGWEQVTSHPAPGP*TNRRPH Trigger: GTGTGGTCGGCGGTTGGTCCAGGGCCCCGGTGCTGG...GTGGGATGTCACCTGCTCCCACCCTTGTTCCTTTCTCTGTTGAGATAATACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| 3UTR CAA 72 bp | CAGTGGGTTCTAGGGCCTGCCATGTATGGGTCCCCATaGTTGACAATGTCCAACTCAAGTGGTCCCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QWVLGPAMYGSP*LTMSNSSGPLA Trigger: AGCAAGGGGACCACTTGAGTTGGACATTGTCAACAATGGGGACCCATACATGGCAGGCCCTAGAACCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR CCA 90 bp | AAGAAATCTGTCTTTCACAGTGAGTCAACCCACAGAAGAGCAAAGTCACTTACACCAGCACCGGGGCCCTaGACCAACCGCCGACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KKSVFHSESTHRRAKSLTPAPGP*TNRRPH Trigger: GTGTGGTCGGCGGTTGGTCCAGGGCCCCGGTGCTGG...TGTAAGTGACTTTGCTCTTCTGTGGGTTGACTCACTGTGAAAGACAGATTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACACCAAATCCTGTAAAGCCTTTTaGGTCTCCACCTCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCLRHSFLEEDQPEVHTKSCKAF*VSTSPC Trigger: ACAAGGAGAGGTGGAGACCCAAAAGGCTTTACAGGA...TTTGGTGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTAACCCACTCAGCCCCTCATTCCAGCAGAACTCCTGCACCCGCTCCAGGCAATCTTTTTGGAGACTaGATTCGAGATATGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVTHSAPHSSRTPAPAPGNLFGD*IRDMVF Trigger: GAAGACCATATCTCGAATTCAGTCTCCAAAAAGATT...GCCTGGAGCGGGTGCAGGAGTTCTGCTGGAATGAGGGGCTGAGTGGGTTACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAAGGAACAAGGGTGGGAGCAGGTGACATCCCACTTACAGAGGTTCCCAAGGGGATTCCTGAAGCATaGCCACATTTACATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKGTRVGAGDIPLTEVPKGIPEA*PHLHQL Trigger: CAGCTGATGTAAATGTGGTCATGCTTCAGGAATCCC...CTTGGGAACCTCTGTAAGTGGGATGTCACCTGCTCCCACCCTTGTTCCTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAATTTGACATGCCAGCCAGTGGTAACATACTTTGGCAGAGGCAGAGGCAGATCTCCGGGTCACAGTaGCACTGTACGTGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KKFDMPASGNILWQRQRQISGSQ*HCTWCP Trigger: AGGACACCACGTACAGTGTCACTGTGACCCGGAGAT...CTGCCTCTGCCTCTGCCAAAGTATGTTACCACTGGCTGGCATGTCAAATTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR TCA 90 bp | CTTGTACCACTCAGTCCACAAGAGCTGTGGGCACAGCTAAGGTCCATTTTAACTGGATACTGGAATACATaGGTCCCAGGCCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVPLSPQELWAQLRSILTGYWNT*VPGPAA Trigger: AGCTGCTGGGCCTGGGACTCATGTATTCCAGTATCC...AGTTAAAATGGACCTTAGCTGTGCCCACAGCTCTTGTGGACTGAGTGGTACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAAGGATACACAGCATACAAAAGAGGCACCGTCTGTCCTTCACTGTCTGGGGATTCCTGAAGCATaGCCACATTTACATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAKDTQHTKEAPSVLHCLGIPEA*PHLHQL Trigger: CAGCTGATGTAAATGTGGTCATGCTTCAGGAATCCC...CAGACAGTGAAGGACAGACGGTGCCTCTTTTGTATGCTGTGTATCCTTGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGGGGGAATTCTCTGGCCTATTTGGGTCCTTTTATTCACCAAACCTCAAGGGGACAGGCTTTCCTaGTGCCTTACACATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPGGILWPIWVLLFTKPQGDRLS*CLTHPS Trigger: AGAAGGATGTGTAAGGCATCAGGAAAGCCTGTCCCC...TTGAGGTTTGGTGAATAAAAGGACCCAAATAGGCCAGAGAATTCCCCCAGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGCACCCGCTCCAGGCTCTTATAAAAGCCTGGGAGAATCACACAGCACTCCATACTCCTGTTCGTaGACAGAAACTTCATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPAPAPGSYKSLGESHSTPYSCS*TETSFG Trigger: GCCAAATGAAGTTTCTGTTCACGAACAGGAGTATGG...AGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGCCTGGAGCGGGTGCAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACACCAAACCACACTCATCCCAGTaGAATAGTAGAAAATTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QCLRHSFLEEDQPEVHTKPHSSQ*NSRKFD Trigger: GTCAAATTTTCTACTATTCCACTGGGATGAGTGTGG...TTTGGTGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACAGTCAGCAAATCTTTTTaGAGACTGAATTCGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ALSASATLSSKRTSLRYTVSKSF*RLNSRY Trigger: ATATCTCGAATTCAGTCTCCAAAAAGATTTGCTGAC...TGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTGAGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR TCA 90 bp | AGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACCATGCCAGTCTATAGGGGACAGGCTTTCCTaGTGCCTTACACATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RITQHLQCGHTKVPCQSIGDRLS*CLTHPS Trigger: AGAAGGATGTGTAAGGCATCAGGAAAGCCTGTCCCC...TATAGACTGGCATGGTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR TCA 90 bp | CAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACACCAAAAATCTTTTTGGAGACTaGATTCGAGATATGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCLRHSFLEEDQPEVHTKNLFGD*IRDMVF Trigger: GAAGACCATATCTCGAATTCAGTCTCCAAAAAGATT...TTTGGTGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACACCAAAAGAAAATTTGACTCCTaGTCAACAAGTCTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QCLRHSFLEEDQPEVHTKRKFDS*STSLHK Trigger: TTTGTGGAGACTTGTTGAGCAGGAGTCAAATTTTCT...TTTGGTGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR CCA 90 bp | CAGGCCAAGGATACACAGCATACAAAAGAGGCACCGTCTGTCCTTCACTGTCTGAAACAAGGAAGAGTTTaGGGTCAAATCTCCGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAKDTQHTKEAPSVLHCLKQGRV*GQISGS Trigger: TGACCCGGAGATTTGACCCCAAACTCTTCCTTGTTT...CAGACAGTGAAGGACAGACGGTGCCTCTTTTGTATGCTGTGTATCCTTGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CAA 72 bp | ACGGGTATCAAGGCCTGGGGGAATTCTCTGGCCTATTaGGGTCCTTTTATTCACCAAACCTCAATCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGIKAWGNSLAY*GPFIHQTSITQ Trigger: TTGGGTGATTGAGGTTTGGTGAATAAAAGGACCCAAATAGGCCAGAGAATTCCCCCAGGCCTTGATACCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| 3UTR CAA 72 bp | CTAGAAGGCATTATTTTCCTGTCTGCACACTTCAACTaGTACCACTCAGTCCACAAGAGCTGTGGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEGIIFLSAHFN*YHSVHKSCGHS Trigger: GCTGTGCCCACAGCTCTTGTGGACTGAGTGGTACAAGTTGAAGTGTGCAGACAGGAAAATAATGCCTTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR TCA 90 bp | GATGTTATAATGTTGTGGTTTGTGACCTCAGGTCCTCACTCTGAAGGTACTGTTGGATACTGGAATACATaGGTCCCAGGCCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DVIMLWFVTSGPHSEGTVGYWNT*VPGPAA Trigger: AGCTGCTGGGCCTGGGACTCATGTATTCCAGTATCC...AACAGTACCTTCAGAGTGAGGACCTGAGGTCACAAACCACAACATTATAACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGAGCTGTGGGCACAGCTAAGGTCCATTTTAACTCTGGGATCCATCTCAGCAAACTTCATTTGGCGTaGGGTGGAAAGAACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRAVGTAKVHFNSGIHLSKLHLA*GGKNLP Trigger: TGGAAGGTTCTTTCCACCTCACGCCAAATGAAGTTT...GCTGAGATGGATCCCAGAGTTAAAATGGACCTTAGCTGTGCCCACAGCTCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR TCA 90 bp | GGTATCCATATGCTTTGCTTATTCCCAGTGGGTTCTAGGGCCTGCCATGTATGGAGAAATTGTTCTGTGTaGAAGTGGGGTACTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIHMLCLFPVGSRACHVWRNCSV*KWGTLS Trigger: GCTCAGAGTACCCCACTTTCACACAGAACAATTTCT...CCATACATGGCAGGCCCTAGAACCCACTGGGAATAAGCAAAGCATATGGATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR GCA 90 bp | CAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACACCAAAATATTTGTAGCACACTaGAAAACTCATGAATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QCLRHSFLEEDQPEVHTKIFVAH*KTHESN Trigger: GTTGGATTCATGAGTTTTGCAGTGTGCTACAAATAT...TTTGGTGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACACCAAAAACAGAATTGTTGACTaGAATTCATATCAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QCLRHSFLEEDQPEVHTKNRIVD*NSYQLG Trigger: CCCAAGTTGATATGAATTCCAGTCAACAATTCTGTT...TTTGGTGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCCTTCACTGTCTGAAGCAGCTCTCTCAGCATTCACTTCTCCAACTACCATCCTGTAAAGCCTTTTaGGTCTCCACCTCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLHCLKQLSQHSLLQLPSCKAF*VSTSPC Trigger: ACAAGGAGAGGTGGAGACCCAAAAGGCTTTACAGGA...TGGTAGTTGGAGAAGTGAATGCTGAGAGAGCTGCTTCAGACAGTGAAGGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| CDS-3UTR CCA 90 bp | CAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACACCAAAGTCAGCAAATCTTTTTaGAGACTGAATTCGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QCLRHSFLEEDQPEVHTKVSKSF*RLNSRY Trigger: ATATCTCGAATTCAGTCTCCAAAAAGATTTGCTGAC...TTTGGTGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTTATAAAAGCCTGGGAGAATCACACAGCACTTACAATGTGGCCACACCAAGAAATTGTTCTGTGTaGAAGTGGGGTACTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSYKSLGESHSTYNVATPRNCSV*KWGTLS Trigger: GCTCAGAGTACCCCACTTTCACACAGAACAATTTCT...TGGTGTGGCCACATTGTAAGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR CCA 90 bp | GGCTCTTATAAAAGCCTGGGAGAATCACACAGCACTTACAATGTGGCCACACCAAAACAAGGAAGAGTTTaGGGTCAAATCTCCGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSYKSLGESHSTYNVATPKQGRV*GQISGS Trigger: TGACCCGGAGATTTGACCCCAAACTCTTCCTTGTTT...TGGTGTGGCCACATTGTAAGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAGAGCAAGTTCTACGACAGCAAGGGCTATGCAGAGAAAATGTGTCTCGTCATTTGGCGTGAGGTaGAAAGAACCTTCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRASSTTARAMQRKCVSSFGVR*KEPSTK Trigger: CTTTGTGGAAGGTTCTTTCCACCTCACGCCAAATGA...CGAGACACATTTTCTCTGCATAGCCCTTGCTGTCGTAGAACTTGCTCTAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| CDS-3UTR CCA 90 bp | GGCTCTTATAAAAGCCTGGGAGAATCACACAGCACTTACAATGTGGCCACACCATCATTTGGCGTGAGGTaGAAAGAACCTTCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSYKSLGESHSTYNVATPSFGVR*KEPSTK Trigger: CTTTGTGGAAGGTTCTTTCCACCTCACGCCAAATGA...TGGTGTGGCCACATTGTAAGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCTAGAGCAAGTTCTACGACAGCAAGGGCTATGCAGAGAAAATGTGTCTCGTCAACTTGGGATTCCTaGAGCATGACCACATTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LSRASSTTARAMQRKCVSSTWDS*SMTTFT Trigger: TGTAAATGTGGTCATGCTTCAGGAATCCCAAGTTGA...CGAGACACATTTTCTCTGCATAGCCCTTGCTGTCGTAGAACTTGCTCTAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR TCA 90 bp | AGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACCATGCCAGTCTATAAAACTTCATTTGGCGTaGGGTGGAAAGAACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RITQHLQCGHTKVPCQSIKLHLA*GGKNLP Trigger: TGGAAGGTTCTTTCCACCTCACGCCAAATGAAGTTT...TATAGACTGGCATGGTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR TCA 90 bp | TATAAAAGCCTGGGAGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACCCATACTCCTGTTCGTaGACAGAAACTTCATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKSLGESHSTYNVATPRYPYSCS*TETSFG Trigger: GCCAAATGAAGTTTCTGTTCACGAACAGGAGTATGG...GTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCTCCCAGGCTTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR GCA 90 bp | AAGAAATTTGACATGCCAGCCAGTGGTAACATACTTTGGCAGAGGCAGAGGCAGCGTGTCCATATATCATaGCACTTTGGGATAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KKFDMPASGNILWQRQRQRVHIS*HFGIST Trigger: TGTGCTTATCCCAAAGTGGCATGATATATGGACACG...CTGCCTCTGCCTCTGCCAAAGTATGTTACCACTGGCTGGCATGTCAAATTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| CDS-3UTR CCA 90 bp | GAGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACCATGCCAGTCTATAACAGAAACTTCATTTaGCGTGAGGTGGAAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: ENHTALTMWPHQGTMPVYNRNFI*REVERT Trigger: GGTTCTTTCCACCTCACGCCAAATGAAGTTTCTGTT...ATAGACTGGCATGGTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| 3UTR CAA 72 bp | AAAGAGAACACAACTGATTCACAGAGGGCTATGCCCTaGAATGGGCGGTCATATGGTAAAATGGAACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KENTTDSQRAMP*NGRSYGKMEQW Trigger: CCACTGTTCCATTTTACCATATGACCGCCCATTCAAGGGCATAGCCCTCTGTGAATCAGTTGTGTTCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| CDS-3UTR TCA 90 bp | CAGCCATGGCCATTTCAGAATCCAGGGCCACTCCATATTGACTTTTCCAAGAATTCAACTTGGGATTCCTaGAGCATGACCACATTTACA | + |
|
Preference number: 4 (lower is better) Translates to: QPWPFQNPGPLHIDFSKNSTWDS*SMTTFT Trigger: TGTAAATGTGGTCATGCTTCAGGAATCCCAAGTTGA...ATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAAATGGCCATGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
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| CDS-3UTR GCA 90 bp | CAGCCATGGCCATTTCAGAATCCAGGGCCACTCCATATTGACTTTTCCAAGAATCGTGTCCATATATCATaGCACTTTGGGATAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QPWPFQNPGPLHIDFSKNRVHIS*HFGIST Trigger: TGTGCTTATCCCAAAGTGGCATGATATATGGACACG...ATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAAATGGCCATGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
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| CDS-3UTR GCA 90 bp | AGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACCATGCCAGTCTATACGTGTCCATATATCATaGCACTTTGGGATAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RITQHLQCGHTKVPCQSIRVHIS*HFGIST Trigger: TGTGCTTATCCCAAAGTGGCATGATATATGGACACG...TATAGACTGGCATGGTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR CCA 90 bp | AGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACCATGCCAGTCTATAAACAGAAACTTCATTTaGCGTGAGGTGGAAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: RITQHLQCGHTKVPCQSINRNFI*REVERT Trigger: GGTTCTTTCCACCTCACGCCAAATGAAGTTTCTGTT...TATAGACTGGCATGGTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR GCA 90 bp | GTAATAAATAAATTGAATTCCAGGACAGCCTGGGCTACAGAGTGGTGCCCTATCTTCCAGATACTAAACTaGTCTAGCTCCTTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VINKLNSRTAWATEWCPIFQILN*SSSFSF Trigger: GAAGCTGAAGGAGCTAGAGCAGTTTAGTATCTGGAA...GATAGGGCACCACTCTGTAGCCCAGGCTGTCCTGGAATTCAATTTATTTATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| CDS-3UTR CCA 90 bp | CCATTTCAGAATCCAGGGCCACTCCATATTGACTTTTCCAAGAATACCATGCTAAAACAAGGAAGAGTTTaGGGTCAAATCTCCGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFQNPGPLHIDFSKNTMLKQGRV*GQISGS Trigger: TGACCCGGAGATTTGACCCCAAACTCTTCCTTGTTT...TAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
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| CDS-3UTR CCA 90 bp | AGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACCATGCCAGTCTATACCACACTCATCCCAGTaGAATAGTAGAAAATTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RITQHLQCGHTKVPCQSIPHSSQ*NSRKFD Trigger: GTCAAATTTTCTACTATTCCACTGGGATGAGTGTGG...TATAGACTGGCATGGTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATGGCCATTTCAGAATCCAGGGCCACTCCATATTGACTTTTCCAAGAATCCACACTCATCCCAGTaGAATAGTAGAAAATTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPWPFQNPGPLHIDFSKNPHSSQ*NSRKFD Trigger: GTCAAATTTTCTACTATTCCACTGGGATGAGTGTGG...ATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAAATGGCCATGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| CDS-3UTR GCA 90 bp | AGAATCACACAGCACTTACAATGTGGCCACACCAAGGTACCATGCCAGTCTATAAGAAAATTTGACTCCTaGTCAACAAGTCTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RITQHLQCGHTKVPCQSIRKFDS*STSLHK Trigger: TTTGTGGAGACTTGTTGAGCAGGAGTCAAATTTTCT...TATAGACTGGCATGGTACCTTGGTGTGGCCACATTGTAAGTGCTGTGTGATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTTATAAAAGCCTGGGAGAATCACACAGCACTTACAATGTGGCCACACCAAACAGAATTGTTGACTaGAATTCATATCAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSYKSLGESHSTYNVATPNRIVD*NSYQLG Trigger: CCCAAGTTGATATGAATTCCAGTCAACAATTCTGTT...TGGTGTGGCCACATTGTAAGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| 3UTR CAA 72 bp | AGCCATGGCCATTTCAGAATCCAGGGCCACTCCATATaGACTTTTCCAAGAATACCATGCTATGAATTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SHGHFRIQGHSI*TFPRIPCYELH Trigger: ATGTAATTCATAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAAATGGCCATGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCACTCCATATTGACTTTTCCAAGAATACCATGCTATGAATTACATCTCTTCCAGATACTAAACTaGTCTAGCTCCTTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGHSILTFPRIPCYELHLFQILN*SSSFSF Trigger: GAAGCTGAAGGAGCTAGAGCAGTTTAGTATCTGGAA...GAGATGTAATTCATAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| CDS-3UTR GCA 90 bp | AACCTCCTTTTCGAGGTAGTCACCATCTGGTCTCCAACAGCAACAGAATCCATAATATTTGTAGCACACTaGAAAACTCATGAATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLLFEVVTIWSPTATESIIFVAH*KTHESN Trigger: GTTGGATTCATGAGTTTTGCAGTGTGCTACAAATAT...TATGGATTCTGTTGCTGTTGGAGACCAGATGGTGACTACCTCGAAAAGGAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR GCA 90 bp | ATCCAGGGCCACTCCATATTGACTTTTCCAAGAATACCATGCTATGAATTACATAGAAAATTTGACTCCTaGTCAACAAGTCTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQGHSILTFPRIPCYELHRKFDS*STSLHK Trigger: TTTGTGGAGACTTGTTGAGCAGGAGTCAAATTTTCT...ATGTAATTCATAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCACTCCATATTGACTTTTCCAAGAATACCATGCTATGAATTACATCTCATATTTGTAGCACACTaGAAAACTCATGAATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QGHSILTFPRIPCYELHLIFVAH*KTHESN Trigger: GTTGGATTCATGAGTTTTGCAGTGTGCTACAAATAT...GAGATGTAATTCATAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGAATCCAGGGCCACTCCATATTGACTTTTCCAAGAATACCATGCTATGAAAACAGAATTGTTGACTaGAATTCATATCAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRIQGHSILTFPRIPCYENRIVD*NSYQLG Trigger: CCCAAGTTGATATGAATTCCAGTCAACAATTCTGTT...TTCATAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
||
| 3UTR CAA 72 bp | TGGAAGACTCACAGCAAACAGACATCCCTGAAAACTTaGTTCTTTCTGAACATTCCTTACCATGTATTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WKTHSKQTSLKT*FFLNIPYHVLS Trigger: ACTTAATACATGGTAAGGAATGTTCAGAAAGAACAAAGTTTTCAGGGATGTCTGTTTGCTGTGAGTCTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
||
| CDS-3UTR CAA 90 bp | GCCCTCAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACATTCAGCTTCTCCTCATaGTCCACCTGGGTAACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSASATLSSKRTSLRYTFSFSS*STWVTR Trigger: CCGAGTTACCCAGGTGGACAATGAGGAGAAGCTGAA...TGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTAACCCACTCAGCCCCTCATTCCAGCAGAACTCCTGCACCCGCTCCAGGCGGTCTCCACCTCTCCTaGTATCCGATACTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVTHSAPHSSRTPAPAPGGLHLS*YPILFF Trigger: GAAGAAGAGTATCGGATACAAGGAGAGGTGGAGACC...GCCTGGAGCGGGTGCAGGAGTTCTGCTGGAATGAGGGGCTGAGTGGGTTACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
||
| CDS TCA 90 bp | CATATCAACTTGGGATTCCTGAAGCATGACCACATTTACATCAGCTaGGCCGCAGACCACGCAGCCGGCGACGACCAAGAGCAGCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: HINLGFLKHDHIYIS*AADHAAGDDQEQPC Trigger: ACATGGCTGCTCTTGGTCGTCGCCGGCTGCGTGGTCTGCGGCTCAGCTGATGTAAATGTGGTCATGCTTCAGGAATCCCAAGTTGATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 |
||
| CDS GCA 90 bp | TGCGGGATCTGGATACTGGAATACATGAGTCCCAGGCCCAGCAGCTaGAGCGTCCAGGTCAGCAGGTTAATGCTTCGTTCATTTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CGIWILEYMSPRPSS*SVQVSRLMLRSFSR Trigger: CCTGGAAAATGAACGAAGCATTAACCTGCTGACCTGGACGCTGCAGCTGCTGGGCCTGGGACTCATGTATTCCAGTATCCAGATCCCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS GCA 90 bp | AGGTTCTTAGTGCACAGTGCAATGACGATGAGAGCAAAGGCAACGTaGGGGATCTGGATACTGGAATACATGAGTCCCAGGCCCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RFLVHSAMTMRAKAT*GIWILEYMSPRPSS Trigger: GCTGCTGGGCCTGGGACTCATGTATTCCAGTATCCAGATCCCGCACGTTGCCTTTGCTCTCATCGTCATTGCACTGTGCACTAAGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS-3UTR CAA 90 bp | ACTCCTGCACCCGCTCCAGGCTCTTATAAAAGCCTGGGAGAATCACACAGCACTTTCAGCTTCTCCTCATaGTCCACCTGGGTAACTCGG | + |
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Preference number: 5 (lower is better) Translates to: TPAPAPGSYKSLGESHSTFSFSS*STWVTR Trigger: CCGAGTTACCCAGGTGGACAATGAGGAGAAGCTGAA...AGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGCCTGGAGCGGGTGCAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS GCA 90 bp | GCTGCACAGCCAGTGGATAGGGTATTCCAGGTTCTTAGTGCACAGTaGAATGACGATGAGAGCAAAGGCAACGTGCGGGATCTGGATACT | + |
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Preference number: 5 (lower is better) Translates to: AAQPVDRVFQVLSAQ*NDDESKGNVRDLDT Trigger: AGTATCCAGATCCCGCACGTTGCCTTTGCTCTCATCGTCATTGCACTGTGCACTAAGAACCTGGAATACCCTATCCACTGGCTGTGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS-3UTR CAA 90 bp | ACCTGCCCCTGTCCTCTCAGCATGCAAATGCAGGCACCCATCTTGGACCCGAGTGGAATAGTAGAAAATTaGACTCCTGCTCAACAAGTC | + |
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Preference number: 5 (lower is better) Translates to: TCPCPLSMQMQAPILDPSGIVEN*TPAQQV Trigger: GACTTGTTGAGCAGGAGTCAAATTTTCTACTATTCC...ACTCGGGTCCAAGATGGGTGCCTGCATTTGCATGCTGAGAGGACAGGGGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| CDS-3UTR CAA 90 bp | ACTCCTGCACCCGCTCCAGGCTCTTATAAAAGCCTGGGAGAATCACACAGCACTTCTATCATCTCAACCTaGAGGCAGGTTTTAGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: TPAPAPGSYKSLGESHSTSIIST*RQVLVL Trigger: CAGCACTAAAACCTGCCTCAAGGTTGAGATGATAGA...AGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGCCTGGAGCGGGTGCAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR CAA 90 bp | ACAAGAGCTGTGGGCACAGCTAAGGTCCATTTTAACTCTGGGATCCATCTCAGCGGTCTCCACCTCTCCTaGTATCCGATACTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TRAVGTAKVHFNSGIHLSGLHLS*YPILFF Trigger: GAAGAAGAGTATCGGATACAAGGAGAGGTGGAGACC...GCTGAGATGGATCCCAGAGTTAAAATGGACCTTAGCTGTGCCCACAGCTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| CDS-3UTR CAA 90 bp | CAGTGCCTCCGCCACTCTTTCCTCGAAGAGGACCAGCCTGAGGTACACACCAAAAGTCAGCAAATCTTTTaGGAGACTGAATTCGAGATA | + |
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Preference number: 5 (lower is better) Translates to: QCLRHSFLEEDQPEVHTKSQQIF*ETEFEI Trigger: TATCTCGAATTCAGTCTCCAAAAAGATTTGCTGACT...TTTGGTGTGTACCTCAGGCTGGTCCTCTTCGAGGAAAGAGTGGCGGAGGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS CCA 90 bp | CACTCCGGACTGTTACAAAATTCTCGGAGTTCCTGTAAAGCCTTTTaGGTCTCCACCTCTCCTTGTATCCGATACTCTTCTTCTGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HSGLLQNSRSSCKAF*VSTSPCIRYSSSVR Trigger: CCTGACAGAAGAAGAGTATCGGATACAAGGAGAGGTGGAGACCCAAAAGGCTTTACAGGAACTCCGAGAATTTTGTAACAGTCCGGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS TCA 90 bp | TCCTCATCCTGGGTAAAGATGCTCCCTAATCCATACTCCTGTTCGTaGACAGAAACTTCATTTGGCGTGAGGTGGAAAGAACCTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SSSWVKMLPNPYSCS*TETSFGVRWKEPST Trigger: TGTGGAAGGTTCTTTCCACCTCACGCCAAATGAAGTTTCTGTTCACGAACAGGAGTATGGATTAGGGAGCATCTTTACCCAGGATGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS CCA 90 bp | ATACTAAACTGCTCTAGCTCCTTCAGCTTCTCCTCATTGTCCACCTaGGTAACTCGGACCAACTTGGAACTATTTACCCGAACCTGTATC | + |
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Preference number: 5 (lower is better) Translates to: ILNCSSSFSFSSLST*VTRTNLELFTRTCI Trigger: GATACAGGTTCGGGTAAATAGTTCCAAGTTGGTCCGAGTTACCCAGGTGGACAATGAGGAGAAGCTGAAGGAGCTAGAGCAGTTTAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS-3UTR CAA 90 bp | CCATTTCAGAATCCAGGGCCACTCCATATTGACTTTTCCAAGAATACCATGCTATTCAGCTTCTCCTCATaGTCCACCTGGGTAACTCGG | + |
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Preference number: 5 (lower is better) Translates to: PFQNPGPLHIDFSKNTMLFSFSS*STWVTR Trigger: CCGAGTTACCCAGGTGGACAATGAGGAGAAGCTGAA...TAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTGGATTCTGAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
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| CDS-3UTR CAA 90 bp | AGGCCTGGGGGAATTCTCTGGCCTATTTGGGTCCTTTTATTCACCAAACCTCAAGGAATTCATATCAACTaGGGATTCCTGAAGCATGAC | + |
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Preference number: 5 (lower is better) Translates to: RPGGILWPIWVLLFTKPQGIHIN*GFLKHD Trigger: GTCATGCTTCAGGAATCCCAAGTTGATATGAATTCC...TTGAGGTTTGGTGAATAAAAGGACCCAAATAGGCCAGAGAATTCCCCCAGGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048099.5 |
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| CDS CCA 90 bp | CTTCCACAAAGTCAGCAAATCTTTTTGGAGACTGAATTCGAGATATaGTCTTCCAGGCAGAGCACTCCGGACTGTTACAAAATTCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: LPQSQQIFLETEFEI*SSRQSTPDCYKILG Trigger: TCCGAGAATTTTGTAACAGTCCGGAGTGCTCTGCCTGGAAGACCATATCTCGAATTCAGTCTCCAAAAAGATTTGCTGACTTTGTGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTGACATCCCACTTACAGAGGTTCCCAAGGAAAAACTAAGCATCCTTTCGGGAATAGTAGAAAATTaGACTCCTGCTCAACAAGTC | + |
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Preference number: 5 (lower is better) Translates to: AGDIPLTEVPKEKLSILSGIVEN*TPAQQV Trigger: GACTTGTTGAGCAGGAGTCAAATTTTCTACTATTCC...CGAAAGGATGCTTAGTTTTTCCTTGGGAACCTCTGTAAGTGGGATGTCACCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
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| CDS-3UTR CAA 90 bp | GGCTCTTATAAAAGCCTGGGAGAATCACACAGCACTTACAATGTGGCCACACCAGGAATAGTAGAAAATTaGACTCCTGCTCAACAAGTC | + |
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Preference number: 5 (lower is better) Translates to: GSYKSLGESHSTYNVATPGIVEN*TPAQQV Trigger: GACTTGTTGAGCAGGAGTCAAATTTTCTACTATTCC...TGGTGTGGCCACATTGTAAGTGCTGTGTGATTCTCCCAGGCTTTTATAAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS TCA 90 bp | TCCCTAATCCATACTCCTGTTCGTGAACAGAAACTTCATTTGGCGTaGGGTGGAAAGAACCTTCCACAAAGTCAGCAAATCTTTTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SLIHTPVREQKLHLA*GGKNLPQSQQIFLE Trigger: CTCCAAAAAGATTTGCTGACTTTGTGGAAGGTTCTTTCCACCTCACGCCAAATGAAGTTTCTGTTCACGAACAGGAGTATGGATTAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR CAA 90 bp | AGGGTCTGTCACAGTGACAGAGTTGCCAGAACTCAGCAAACTTTTAAACAGGAGAGTCAGCAAATCTTTTaGGAGACTGAATTCGAGATA | + |
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Preference number: 5 (lower is better) Translates to: RVCHSDRVARTQQTFKQESQQIF*ETEFEI Trigger: TATCTCGAATTCAGTCTCCAAAAAGATTTGCTGACT...CTCCTGTTTAAAAGTTTGCTGAGTTCTGGCAACTCTGTCACTGTGACAGACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCCACTCCATATTGACTTTTCCAAGAATACCATGCTATGAATTACATCTCGGAATTCATATCAACTaGGGATTCCTGAAGCATGAC | + |
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Preference number: 5 (lower is better) Translates to: QGHSILTFPRIPCYELHLGIHIN*GFLKHD Trigger: GTCATGCTTCAGGAATCCCAAGTTGATATGAATTCC...GAGATGTAATTCATAGCATGGTATTCTTGGAAAAGTCAATATGGAGTGGCCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
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| CDS-3UTR CAA 90 bp | ATCTCAAATAAAATTAAGGTTTTAGAGCAACTTGACAGTCAGCGTGACATGATCTCTATCATCTCAACCTaGAGGCAGGTTTTAGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ISNKIKVLEQLDSQRDMISIIST*RQVLVL Trigger: CAGCACTAAAACCTGCCTCAAGGTTGAGATGATAGA...GATCATGTCACGCTGACTGTCAAGTTGCTCTAAAACCTTAATTTTATTTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118612.8 |
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| CDS TCA 72 bp | TTGGGATTCCTGAAGCATGACCACATTTACATCAGCTaGGCCGCAGACCACGCAGCCGGCGACGACCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LGFLKHDHIYIS*AADHAAGDDQE Trigger: CTCTTGGTCGTCGCCGGCTGCGTGGTCTGCGGCTCAGCTGATGTAAATGTGGTCATGCTTCAGGAATCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 |
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| CDS CCA 72 bp | GCAATGACGATGAGAGCAAAGGCAACGTGCGGGATCTaGATACTGGAATACATGAGTCCCAGGCCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AMTMRAKATCGI*ILEYMSPRPSS Trigger: GCTGCTGGGCCTGGGACTCATGTATTCCAGTATCCAGATCCCGCACGTTGCCTTTGCTCTCATCGTCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS CCA 72 bp | TCTGAGCCCTCCTCTTCTGAGGACAGCTCCTCATCCTaGGTAAAGATGCTCCCTAATCCATACTCCTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: SEPSSSEDSSSS*VKMLPNPYSCS Trigger: CGAACAGGAGTATGGATTAGGGAGCATCTTTACCCAGGATGAGGAGCTGTCCTCAGAAGAGGAGGGCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS GCA 72 bp | CCAGTGGATAGGGTATTCCAGGTTCTTAGTGCACAGTaGAATGACGATGAGAGCAAAGGCAACGTGCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PVDRVFQVLSAQ*NDDESKGNVRD Trigger: ATCCCGCACGTTGCCTTTGCTCTCATCGTCATTGCACTGTGCACTAAGAACCTGGAATACCCTATCCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS CAA 72 bp | AACAGTGTCAGTCCGAGGAGGAAAACAAGGAAGAGTTaGGGGTCAAATCTCCGGGTCACAGTGACACTGTAC | + |
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Preference number: 6 (lower is better) Translates to: NSVSPRRKTRKS*GSNLRVTVTLY Trigger: GTACAGTGTCACTGTGACCCGGAGATTTGACCCCAAACTCTTCCTTGTTTTCCTCCTCGGACTGACACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS TCA 72 bp | CAAGGAAGAGTTTGGGGTCAAATCTCCGGGTCACAGTaGCACTGTACGTGGTGTCCTTCTCTATCATCTCAA | + |
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Preference number: 6 (lower is better) Translates to: QGRVWGQISGSQ*HCTWCPSLSSQ Trigger: TTGAGATGATAGAGAAGGACACCACGTACAGTGTCACTGTGACCCGGAGATTTGACCCCAAACTCTTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS CAA 72 bp | TTCTCCTCATTGTCCACCTGGGTAACTCGGACCAACTaGGAACTATTTACCCGAACCTGTATCCGTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: FSSLSTWVTRTN*ELFTRTCIRVH Trigger: ATGGACACGGATACAGGTTCGGGTAAATAGTTCCAAGTTGGTCCGAGTTACCCAGGTGGACAATGAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS CAA 90 bp | AAGTTCCAGATACTAAACTGCTCTAGCTCCTTCAGCTTCTCCTCATaGTCCACCTGGGTAACTCGGACCAACTTGGAACTATTTACCCGA | + |
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Preference number: 6 (lower is better) Translates to: KFQILNCSSSFSFSS*STWVTRTNLELFTR Trigger: TCGGGTAAATAGTTCCAAGTTGGTCCGAGTTACCCAGGTGGACAATGAGGAGAAGCTGAAGGAGCTAGAGCAGTTTAGTATCTGGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS CAA 72 bp | ATACTAAACTGCTCTAGCTCCTTCAGCTTCTCCTCATaGTCCACCTGGGTAACTCGGACCAACTTGGAACTA | + |
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Preference number: 6 (lower is better) Translates to: ILNCSSSFSFSS*STWVTRTNLEL Trigger: TAGTTCCAAGTTGGTCCGAGTTACCCAGGTGGACAATGAGGAGAAGCTGAAGGAGCTAGAGCAGTTTAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS CAA 72 bp | ACACTGTACGTGGTGTCCTTCTCTATCATCTCAACCTaGAGGCAGGTTTTAGTGCTGTACAGACCCACGTTA | + |
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Preference number: 6 (lower is better) Translates to: TLYVVSFSIIST*RQVLVLYRPTL Trigger: TAACGTGGGTCTGTACAGCACTAAAACCTGCCTCAAGGTTGAGATGATAGAGAAGGACACCACGTACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048099.5 ENSMUST00000118612.8 ENSMUST00000118728.8 |
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| CDS TCA 72 bp | CATACTCCTGTTCGTGAACAGAAACTTCATTTGGCGTaGGGTGGAAAGAACCTTCCACAAAGTCAGCAAATC | + |
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Preference number: 6 (lower is better) Translates to: HTPVREQKLHLA*GGKNLPQSQQI Trigger: GATTTGCTGACTTTGTGGAAGGTTCTTTCCACCTCACGCCAAATGAAGTTTCTGTTCACGAACAGGAGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS TCA 72 bp | TGGGTAAAGATGCTCCCTAATCCATACTCCTGTTCGTaGACAGAAACTTCATTTGGCGTGAGGTGGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: WVKMLPNPYSCS*TETSFGVRWKE Trigger: TTCTTTCCACCTCACGCCAAATGAAGTTTCTGTTCACGAACAGGAGTATGGATTAGGGAGCATCTTTACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS CCA 72 bp | CTGTTACAAAATTCTCGGAGTTCCTGTAAAGCCTTTTaGGTCTCCACCTCTCCTTGTATCCGATACTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLQNSRSSCKAF*VSTSPCIRYSS Trigger: AGAAGAGTATCGGATACAAGGAGAGGTGGAGACCCAAAAGGCTTTACAGGAACTCCGAGAATTTTGTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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| CDS CCA 72 bp | AGTCAGCAAATCTTTTTGGAGACTGAATTCGAGATATaGTCTTCCAGGCAGAGCACTCCGGACTGTTACAAA | + |
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Preference number: 6 (lower is better) Translates to: SQQIFLETEFEI*SSRQSTPDCYK Trigger: TTTGTAACAGTCCGGAGTGCTCTGCCTGGAAGACCATATCTCGAATTCAGTCTCCAAAAAGATTTGCTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048099.5 ENSMUST00000118728.8 |
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