Pregenerated sensors for NEMF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020982Ensembl transcript IDs: ENSMUST00000021368.10, ENSMUST00000220484.2, ENSMUST00000222065.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTGTTGGATTCCCTGGAACAGGAGTTACAAGCTGCAATGTGGGTaGTGGCAACTGTACGTGGGCCCTGTGGAAGAACAGCCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: GCWIPWNRSYKLQCG*WQLYVGPVEEQPVL Trigger: GAGCACTGGCTGTTCTTCCACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGGAATCCAACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR GCA 90 bp | TGCATGCCTGAGGGTGTTGGATTCCCTGGAACAGGAGTTACAAGCTaGAATGTGGGTGCTGGCAACTGTACGTGGGCCCTGTGGAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: CMPEGVGFPGTGVTS*NVGAGNCTWALWKN Trigger: GTTCTTCCACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGGAATCCAACACCCTCAGGCATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR CCA 90 bp | CTGAGGGTGTTGGATTCCCTGGAACAGGAGTTACAAGCTGCAATGTaGGTGCTGGCAACTGTACGTGGGCCCTGTGGAAGAACAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: LRVLDSLEQELQAAM*VLATVRGPCGRTAS Trigger: ACTGGCTGTTCTTCCACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGGAATCCAACACCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR CCA 90 bp | TGTTGGATTCCCTGGAACAGGAGTTACAAGCTGCAATGTGGGTGCTaGCAACTGTACGTGGGCCCTGTGGAAGAACAGCCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: CWIPWNRSYKLQCGC*QLYVGPVEEQPVLL Trigger: TAAGAGCACTGGCTGTTCTTCCACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGGAATCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR TCA 90 bp | GTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCAAAAAGCATCTTTaGCCTTTCCCAGACTCCAGACAGTTTCTCTCTGTAGCTTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: VQESLVISLKAKKHL*PFPDSRQFLSVALA Trigger: AGCCAAAGCTACAGAGAGAAACTGTCTGGAGTCTGGGAAAGGTCAAAGATGCTTTTTGGCTTTTAGGCTTATCACTAAAGATTCCTGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR GCA 90 bp | CAATTTAAATCTATTCATGGAAGTGCTGTCTCACAAACATCTCAGTaGACTGTGCAAGAGTACTCACGAAGTAATGGGTTAAGAACTCTC | + |
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Preference number: 1 (lower is better) Translates to: QFKSIHGSAVSQTSQ*TVQEYSRSNGLRTL Trigger: GAGAGTTCTTAACCCATTACTTCGTGAGTACTCTTGCACAGTGCACTGAGATGTTTGTGAGACAGCACTTCCATGAATAGATTTAAATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220484.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGAACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCCTCTTTGACAGCTGCTaGGGGTTGGGAGAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: PWNRSYKLQCGCWQLYVGLFDSC*GLGEKM Trigger: CATTTTCTCTCCCAACCCCCAGCAGCTGTCAAAGAG...GCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR-3UTR GCA 90 bp | AAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCAAAAAGCATCTCTGCCTCCCCAATGCTaGCAGCACCACCCAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: KNTGPGIFSDKPKSQKASLPPQC*QHHPAR Trigger: TCTTGCTGGGTGGTGCTGGCAGCATTGGGGAGGCAG...AGATGCTTTTTGGCTTTTAGGCTTATCACTAAAGATTCCTGGACCAGTATTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGCCAAAGGCTACAAACTaGCTGTTCAGTGCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVPKATN*LFSAEA Trigger: AGCCTCAGCACTGAACAGCCAGTTTGTAGCCTTTGG...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAACTCTCTTCAGCACTTCACCTTTAGGAGCAGCAGCTATTACTTCAGTCAAAAGGTTCAGCAGCTCTaGCATGATCTATGGGATAGC | + |
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Preference number: 2 (lower is better) Translates to: KNSLQHFTFRSSSYYFSQKVQQL*HDLWDS Trigger: GCTATCCCATAGATCATGCCAGAGCTGCTGAACCTT...TTGACTGAAGTAATAGCTGCTGCTCCTAAAGGTGAAGTGCTGAAGAGAGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220484.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAAGGGTCGTTACATCATaGAATGAAACCTCAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: PPSKKMHFCYYRSRYLSPRVVTS*NETSRS Trigger: ACTTCTTGAGGTTTCATTTCATGATGTAACGACCCT...TGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR-3UTR TCA 90 bp | CCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAAGTAGTTTATGCACTTaGGCTATTTCAGGGTCGTTA | + |
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Preference number: 2 (lower is better) Translates to: PPSKKMHFCYYRSRYLSPSSLCT*AISGSL Trigger: TAACGACCCTGAAATAGCTCAAGTGCATAAACTACT...TGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR-3UTR TCA 90 bp | AAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCAAAAAGCATCTACAGTTTTAACTCTTTaGCAGCTGCTGGGGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: KNTGPGIFSDKPKSQKASTVLTL*QLLGVG Trigger: CCCAACCCCCAGCAGCTGTCAAAGAGTTAAAACTGT...AGATGCTTTTTGGCTTTTAGGCTTATCACTAAAGATTCCTGGACCAGTATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR-3UTR CCA 90 bp | CCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAAGAGAAACCCTGACTTaGAAAAACCAAAATCACTTA | + |
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Preference number: 2 (lower is better) Translates to: PPSKKMHFCYYRSRYLSPRETLT*KNQNHL Trigger: TAAGTGATTTTGGTTTTTCCAAGTCAGGGTTTCTCT...TGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR CCA 72 bp | TTGGATTCCCTGGAACAGGAGTTACAAGCTGCAATGTaGGTGCTGGCAACTGTACGTGGGCCCTGTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: LDSLEQELQAAM*VLATVRGPCGR Trigger: TCTTCCACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGGAATCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR-3UTR CAA 90 bp | CCCCAATGCTGCCAGCACCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTGACAGCTGCTGGGGGTaGGGAGAGAAAATGGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: PQCCQHHPARKCTSVITGDSCWG*GEKMAN Trigger: GTTTGCCATTTTCTCTCCCAACCCCCAGCAGCTGTC...ACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGGTGCTGGCAGCATTGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR-3UTR CAA 90 bp | AACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCCCTGTGTCTCCAACCCCTGCATaGACTTTTTATCCCACGTCT | + |
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Preference number: 3 (lower is better) Translates to: NRSYKLQCGCWQLYVGPVSPTPA*TFYPTS Trigger: AGACGTGGGATAAAAAGTCAATGCAGGGGTTGGAGA...CACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR TCA 72 bp | TTGTGTAAATGTATGCCTCATTTGTGTGGATACTCATaGAGCCAGAAAAGGAGGTCAGACCCCCTGGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: LCKCMPHLCGYS*SQKRRSDPLEL Trigger: CAGCTCCAGGGGGTCTGACCTCCTTTTCTGGCTTCATGAGTATCCACACAAATGAGGCATACATTTACACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220484.2 |
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| 3UTR TCA 72 bp | TATTTATGTATACTGAATGGTGTTTTCCTGCATGCCTaGGGGTGTTGGATTCCCTGGAACAGGAGTTACAAG | + |
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Preference number: 3 (lower is better) Translates to: YLCILNGVFLHA*GCWIPWNRSYK Trigger: CTTGTAACTCCTGTTCCAGGGAATCCAACACCCTCAGGCATGCAGGAAAACACCATTCAGTATACATAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR CCA 72 bp | AACTCTTTGACAGCTGCTGGGGGTTGGGAGAGAAAATaGCAAACAACTGAGAGATATTACAAGGAAGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: NSLTAAGGWERK*QTTERYYKEEV Trigger: AACTTCTTCCTTGTAATATCTCTCAGTTGTTTGCCATTTTCTCTCCCAACCCCCAGCAGCTGTCAAAGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR TCA 72 bp | TCTTTAGTGATAAGCCTAAAAGCCAAAAAGCATCTTTaGCCTTTCCCAGACTCCAGACAGTTTCTCTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: SLVISLKAKKHL*PFPDSRQFLSV Trigger: TACAGAGAGAAACTGTCTGGAGTCTGGGAAAGGTCAAAGATGCTTTTTGGCTTTTAGGCTTATCACTAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR TCA 72 bp | TGTTTAATTGTTCCATTAACCAAACGAAACCTCTCGTaGCTGGCTGTACTATGTATTAGATGTTATATACAG | + |
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Preference number: 3 (lower is better) Translates to: CLIVPLTKRNLS*LAVLCIRCYIQ Trigger: CTGTATATAACATCTAATACATAGTACAGCCAGTCACGAGAGGTTTCGTTTGGTTAATGGAACAATTAAACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CCCTGGAACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCCATAGGCTGACAGGCTaGGATCCACATCTACAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PWNRSYKLQCGCWQLYVGHRLTG*DPHLQA Trigger: TGCTTGTAGATGTGGATCTCAGCCTGTCAGCCTATG...GCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCCCAATGCTGCCAGCACCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTAGCGGCTTGTTCTTCTaGGGCTTCTGCAGCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: PQCCQHHPARKCTSVITGSGLFF*GFCSCL Trigger: CAAGCAGCTGCAGAAGCCGCAGAAGAACAAGCCGCT...ACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGGTGCTGGCAGCATTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | AACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCCCTGTGCTGTCCTCTTTTCATTaGCTGTCCAGCTGCCACATT | + |
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Preference number: 4 (lower is better) Translates to: NRSYKLQCGCWQLYVGPVLSSFH*LSSCHI Trigger: AATGTGGCAGCTGGACAGCCAATGAAAAGAGGACAG...CACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | AACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCCCTGTGAAGTCTTGTAAGTCATaGGCTAAAACCTGCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: NRSYKLQCGCWQLYVGPVKSCKS*AKTCRD Trigger: GTCCCTGCAGGTTTTAGCTCATGACTTACAAGACTT...CACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | GGCGGATCTCTTGAGTTCAAGGCCAGTCTGGTCTACAGAGAAACCCTGACTTGGTTCGGACTACCTGAATaGCTCTGTCCACTATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GGSLEFKASLVYRETLTWFGLPE*LCPLSA Trigger: TGCAGATAGTGGACAGAGCCATTCAGGTAGTCCGAA...CCAAGTCAGGGTTTCTCTGTAGACCAGACTGGCCTTGAACTCAAGAGATCCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CCCTGGAACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCTATAGCCCTTTCCATTaGAGTTGGATGTTTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PWNRSYKLQCGCWQLYVGYSPFH*SWMFSS Trigger: TGAGGAAAACATCCAACTTCAATGGAAAGGGCTATA...GCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAGTGCTGAGCCATTTCTTCTGCCATaGGTTCACTTGTGCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HVCIVDLPKATNWLFSAEPFLLP*VHLCSL Trigger: CAAGCTGCACAAGTGAACTCATGGCAGAAGAAATGG...CTCAGCACTGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | GGCGGATCTCTTGAGTTCAAGGCCAGTCTGGTCTACAGAGAAACCCTGACTTGGCTTCTTTGGAGTGCATaGAACTGTTCAAGGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GGSLEFKASLVYRETLTWLLWSA*NCSRLS Trigger: AGACAGCCTTGAACAGTTTCATGCACTCCAAAGAAG...CCAAGTCAGGGTTTCTCTGTAGACCAGACTGGCCTTGAACTCAAGAGATCCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAGTGCTGAGAGCACTGTAGCAAAGTaGCATTGTGCCTGCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: HVCIVDLPKATNWLFSAESTVAK*HCACFS Trigger: ACTGAAGCAGGCACAATGGCACTTTGCTACAGTGCT...CTCAGCACTGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | GGCGGATCTCTTGAGTTCAAGGCCAGTCTGGTCTACAGAGAAACCCTGACTTGGCACTGTTCTCAATGCTaGCATCACCATCACCATCTT | + |
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Preference number: 4 (lower is better) Translates to: GGSLEFKASLVYRETLTWHCSQC*HHHHHL Trigger: AAGATGGTGATGGTGATGCCAGCATTGAGAACAGTG...CCAAGTCAGGGTTTCTCTGTAGACCAGACTGGCCTTGAACTCAAGAGATCCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | GGCGGATCTCTTGAGTTCAAGGCCAGTCTGGTCTACAGAGAAACCCTGACTTGGTTTCTCTTCTCTCCTTaGCTGACAAATGTCTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: GGSLEFKASLVYRETLTWFLFSP*LTNVFG Trigger: GCCGAAGACATTTGTCAGCCAAGGAGAGAAGAGAAA...CCAAGTCAGGGTTTCTCTGTAGACCAGACTGGCCTTGAACTCAAGAGATCCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | CCCCAATGCTGCCAGCACCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTTACATCCTCAGGATGTaGCTGCCCTGTCAAAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: PQCCQHHPARKCTSVITGYILRM*LPCQRV Trigger: GACTCTTTGACAGGGCAGCCACATCCTGAGGATGTA...ACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGGTGCTGGCAGCATTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR CAA 72 bp | CCTTTCCCAGACTCCAGACAGTTTCTCTCTGTAGCTTaGGCTGTCCTGAGCTCAAACTCACAGAGATCTACC | + |
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Preference number: 4 (lower is better) Translates to: PFPDSRQFLSVA*AVLSSNSQRST Trigger: GGTAGATCTCTGTGAGTTTGAGCTCAGGACAGCCAAAGCTACAGAGAGAAACTGTCTGGAGTCTGGGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAGTGCTGAGGCAGGTTCATCTCTATaGGCTCCCCTTTCAGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: HVCIVDLPKATNWLFSAEAGSSL*APLSVY Trigger: ATAAACTGAAAGGGGAGCTCATAGAGATGAACCTGC...CTCAGCACTGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CCCCAATGCTGCCAGCACCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTGCAGTTTTAGCTCTTTaGTTGCACATGCAACCGGGT | + |
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Preference number: 4 (lower is better) Translates to: PQCCQHHPARKCTSVITGAVLAL*LHMQPG Trigger: ACCCGGTTGCATGTGCAATCAAAGAGCTAAAACTGC...ACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGGTGCTGGCAGCATTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | GGCGGATCTCTTGAGTTCAAGGCCAGTCTGGTCTACAGAGAAACCCTGACTTGGGATCCCGACCACCTATaGTTAAATAGTTCTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GGSLEFKASLVYRETLTWDPDHL*LNSSLN Trigger: GTTCAGAGAACTATTTAATCATAGGTGGTCGGGATC...CCAAGTCAGGGTTTCTCTGTAGACCAGACTGGCCTTGAACTCAAGAGATCCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAGTGCTGAGTTCAGCTGGTTTATCTaGATCCAGGCTTGGTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: HVCIVDLPKATNWLFSAEFSWFI*IQAWFC Trigger: GCAAAACCAAGCCTGGATGCAGATAAACCAGCTGAA...CTCAGCACTGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGGCACTTCGGACTACCTaGATGGCTCTGTCCACTATC | + |
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Preference number: 4 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVALRTT*MALSTI Trigger: GATAGTGGACAGAGCCATTCAGGTAGTCCGAAGTGC...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCCCAATGCTGCCAGCACCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCATTGGCTGTCCAGCTaGCACATTTTTGCTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PQCCQHHPARKCTSVITGHWLSS*HIFACV Trigger: AACACAAGCAAAAATGTGGCAGCTGGACAGCCAATG...ACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGGTGCTGGCAGCATTGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | AACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCCCTGTGCACATAAATGTCTCCTaGTGTCAAGTATCTTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: NRSYKLQCGCWQLYVGPVHINVS*CQVSFH Trigger: GTGAAAAGATACTTGACACCAGGAGACATTTATGTG...CACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGAAGTGCCATTGTGCCTaGTTCAGTCAAAGTCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVKCHCA*FSQSPW Trigger: CCACGGACTTTGACTGAAGCAGGCACAATGGCACTT...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCTGTTAACACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAACTAGTGATAACACGTaGATCCCAAGCAGCACTGTA | + |
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Preference number: 4 (lower is better) Translates to: PVNTSASLTFQRLQTGCSTSDNT*IPSSTV Trigger: TACAGTGCTGCTTGGGATGCACGTGTTATCACTAGT...TGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTGTTAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCTGTTAACACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAGTGGCTTCTTTGGAGTaGATGAAACTGTTCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PVNTSASLTFQRLQTGCSVASLE*MKLFKA Trigger: AGCCTTGAACAGTTTCATGCACTCCAAAGAAGCCAC...TGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTGTTAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CCAAACGAAACCTCTCGTGACTGGCTGTACTATGTATTAGATGTTATATACAGTGGCATTGGCATAGGCTaGCAGGCTGAGATCCACATC | + |
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Preference number: 4 (lower is better) Translates to: PNETSRDWLYYVLDVIYSGIGIG*QAEIHI Trigger: GATGTGGATCTCAGCCTGTCAGCCTATGCCAATGCC...ACTGTATATAACATCTAATACATAGTACAGCCAGTCACGAGAGGTTTCGTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAGTGCTGAGGTAACGTGGTTGGTTTaGAGTTTTAGCTCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: HVCIVDLPKATNWLFSAEVTWLV*SFSSLI Trigger: AATCAAAGAGCTAAAACTGCAAACCAACCACGTTAC...CTCAGCACTGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCATTCTTCTGCGGCTTCTaGAGCTGCTTGTTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPSKKMHFCYYRSRYLSPFFCGF*SCLFFC Trigger: GCAAAAGAACAAGCAGCTGCAGAAGCCGCAGAAGAA...TGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCATCCTCAGGATGTGGCTaGCCTGTCAAAGAGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PPSKKMHFCYYRSRYLSPSSGCG*PVKESN Trigger: ATTTGACTCTTTGACAGGGCAGCCACATCCTGAGGA...TGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | CCTGTTAACACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCATCGTCACTTCCAAACTaGAAATCCACAATTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVNTSASLTFQRLQTGCSSSLPN*KSTILS Trigger: GGACAGAATTGTGGATTTCCAGTTTGGAAGTGACGA...TGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTGTTAACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGCTCTGGCATGATCTATaGGATAGCGTTCACGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVLWHDL*DSVHEQ Trigger: CTGTTCGTGAACGCTATCCCATAGATCATGCCAGAG...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGAAGGTTCAGCAGCTCTaGCATGATCTATGGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVKVQQL*HDLWDS Trigger: GCTATCCCATAGATCATGCCAGAGCTGCTGAACCTT...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | ATAGGAGCCAGAAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCAGCAAAGTGCCATTGTaGCTGCTTCAGTCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGARRILVQESLVISLKASKVPL*LLQSKS Trigger: GGACTTTGACTGAAGCAGGCACAATGGCACTTTGCT...GGCTTTTAGGCTTATCACTAAAGATTCCTGGACCAGTATTCTTCTGGCTCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CCTGTTAACACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCATGTCATAGAGCTCAATaGTTAAGTGATAAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVNTSASLTFQRLQTGCSCHRAQ*LSDKQL Trigger: AAGCTGCTTATCACTTAATCATTGAGCTCTATGACA...TGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTGTTAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CCTGTTAACACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAATTTATAGTTTGTCATaGTGGTGTAAGGGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: PVNTSASLTFQRLQTGCSIYSLS*WCKGHI Trigger: TATGTGCCCCTTACACCATCATGACAAACTATAAAT...TGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTGTTAACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS-3UTR GCA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGTCCATGTCTTCATCCTaGACTCTGACTTTTCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVSMSSS*TLTFRS Trigger: TGAACGAAAAGTCAGAGTGCAGGATGAAGACATGGA...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTTCGAACCTGCAGATaGCAGCAACTTCATAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPSKKMHFCYYRSRYLSPVRTCR*QQLHNK Trigger: CTTATTATGAAGTTGCTGGCATCTGCAGGTTCGAAC...TGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS-3UTR CCA 90 bp | GAAGAAGTTAGGGAGGAAAGTGATAGATATGAATACACGGAAACAACTGTCATTTTCAGTCAAAGTCCGTaGAGGGATGGGTTCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEVREESDRYEYTETTVIFSQSP*RDGFAC Trigger: ACAGGCGAACCCATCCCTCCACGGACTTTGACTGAA...AATGACAGTTGTTTCCGTGTATTCATATCTATCACTTTCCTCCCTAACTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | TATTCTGATAGGAGCCAGAAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTCAAGCTGTTTTGCACTaGCTAATCTCCGACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSDRSQKNTGPGIFSDKPQAVLH*LISDSS Trigger: TGAAGAGTCGGAGATTAGTCAGTGCAAAACAGCTTG...AGGCTTATCACTAAAGATTCCTGGACCAGTATTCTTCTGGCTCCTATCAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS-3UTR GCA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGCTTTCTATAAGACAGTaGTCAATAAGAGCTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVLSIRQ*SIRAGP Trigger: TGGACCAGCTCTTATTGAGCACTGTCTTATAGAAAG...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAATATTCTCCTGTTGGTaGTGTTTTAGACACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PPSKKMHFCYYRSRYLSPIFSCW*CFRHLM Trigger: CATCAGGTGTCTAAAACAGCACCAACAGGAGAATAT...TGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCATTGTTCCATTTCTTCTaGCATGAGTTCACTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSKKMHFCYYRSRYLSPLFHFF*HEFTCA Trigger: TGCACAAGTGAACTCATGGCAGAAGAAATGGAACAA...TGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | ATAGGAGCCAGAAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCTATTTCCTCTTCACATaGAGAAGATTAGGTGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IGARRILVQESLVISLKAYFLFT*RRLGAD Trigger: GTCCGCACCTAATCTTCTGCATGTGAAGAGGAAATA...GGCTTTTAGGCTTATCACTAAAGATTCCTGGACCAGTATTCTTCTGGCTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | GAAGAAGTTAGGGAGGAAAGTGATAGATATGAATACACGGAAACAACTGTCATTTCCAGTCTATCTGGTTaGCCAACGCACTTCGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: EEVREESDRYEYTETTVISSLSG*PTHFGL Trigger: TAGTCCGAAGTGCGTTGGCCAACCAGATAGACTGGA...AATGACAGTTGTTTCCGTGTATTCATATCTATCACTTTCCTCCCTAACTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | AGAGAGCAATTTAAATCTATTCATGGAAGTGCTGTCTCACAAACATCTCAGTGCCAAGCTGTTTTGCACTaGCTAATCTCCGACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: REQFKSIHGSAVSQTSQCQAVLH*LISDSS Trigger: TGAAGAGTCGGAGATTAGTCAGTGCAAAACAGCTTG...GCACTGAGATGTTTGTGAGACAGCACTTCCATGAATAGATTTAAATTGCTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220484.2 |
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| CDS-3UTR TCA 90 bp | AAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCAAAAAGCATCTCTTCATCCTGCACTCTaGCTTTTCGTTCACCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KNTGPGIFSDKPKSQKASLHPAL*LFVHLD Trigger: ATCGAGGTGAACGAAAAGTCAGAGTGCAGGATGAAG...AGATGCTTTTTGGCTTTTAGGCTTATCACTAAAGATTCCTGGACCAGTATTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | GAAGAAGTTAGGGAGGAAAGTGATAGATATGAATACACGGAAACAACTGTCATTGCTCTGTCCACTATCTaGAGGTTCATCTCTATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEVREESDRYEYTETTVIALSTI*RFISMS Trigger: GCTCATAGAGATGAACCTGCAGATAGTGGACAGAGC...AATGACAGTTGTTTCCGTGTATTCATATCTATCACTTTCCTCCCTAACTTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | CACTGGCCATTATGCTGTGAACTGAGTAGCTATGCAGTTCCTTGTTCAATTTTTTCGTCACTTCCAAACTaGAAATCCACAATTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HWPLCCELSSYAVPCSIFSSLPN*KSTILS Trigger: GGACAGAATTGTGGATTTCCAGTTTGGAAGTGACGA...AAAAATTGAACAAGGAACTGCATAGCTACTCAGTTCACAGCATAATGGCCAGTG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000220484.2 |
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| CDS-3UTR TCA 90 bp | AATCTATTCATGGAAGTGCTGTCTCACAAACATCTCAGTGCACTGTGCAAGAGTTGTCATAGAGCTCAATaGTTAAGTGATAAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLFMEVLSHKHLSALCKSCHRAQ*LSDKQL Trigger: AAGCTGCTTATCACTTAATCATTGAGCTCTATGACA...ACTCTTGCACAGTGCACTGAGATGTTTGTGAGACAGCACTTCCATGAATAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220484.2 |
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| CDS-3UTR TCA 90 bp | TATTCTGATAGGAGCCAGAAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTGAAAACAAGAAAGGATaGAACTCCTCATACGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSDRSQKNTGPGIFSDKPENKKG*NSSYVS Trigger: ACTCACGTATGAGGAGTTTCATCCTTTCTTGTTTTC...AGGCTTATCACTAAAGATTCCTGGACCAGTATTCTTCTGGCTCCTATCAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR GCA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGAAACTTAACATCATCTaGTTCATCAGTTCGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVKLNII*FISSKP Trigger: AGGTTTCGAACTGATGAAGCAGATGATGTTAAGTTT...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CCA 90 bp | GAAGAAGTTAGGGAGGAAAGTGATAGATATGAATACACGGAAACAACTGTCATTGAGTATGTCTTCAGCTaGTTTATCTGCATCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEVREESDRYEYTETTVIEYVFS*FICIQA Trigger: AGCCTGGATGCAGATAAACCAGCTGAAGACATACTC...AATGACAGTTGTTTCCGTGTATTCATATCTATCACTTTCCTCCCTAACTTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| 3UTR CAA 72 bp | ATCTTTAGTGATAAGCCTAAAAGCCAAAAAGCATCTTaGACCTTTCCCAGACTCCAGACAGTTTCTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFSDKPKSQKAS*TFPRLQTVSLC Trigger: ACAGAGAGAAACTGTCTGGAGTCTGGGAAAGGTCAAAGATGCTTTTTGGCTTTTAGGCTTATCACTAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR TCA 90 bp | CCAAACGAAACCTCTCGTGACTGGCTGTACTATGTATTAGATGTTATATACAGTCACGGCCTTGTCAAATaGTTCAAATTCTATATATGG | + |
|
Preference number: 4 (lower is better) Translates to: PNETSRDWLYYVLDVIYSHGLVK*FKFYIW Trigger: CCATATATAGAATTTGAATCATTTGACAAGGCCGTG...ACTGTATATAACATCTAATACATAGTACAGCCAGTCACGAGAGGTTTCGTTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS GCA 90 bp | AACACGTGCATCCCAAGCAGCACTGTAGCAAAGTGCCATTGTGCCTaGTTCAGTCAAAGTCCGTGGAGGGATGGGTTCGCCTGTCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: NTCIPSSTVAKCHCA*FSQSPWRDGFACRI Trigger: AATCCGACAGGCGAACCCATCCCTCCACGGACTTTGACTGAAGCAGGCACAATGGCACTTTGCTACAGTGCTGCTTGGGATGCACGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | CCCTGGAACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCCACAGCAATGTCCTCTaGATCAACCTGAGTCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PWNRSYKLQCGCWQLYVGHSNVL*INLSHE Trigger: CTCATGACTCAGGTTGATCAAGAGGACATTGCTGTG...GCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | CCCTGGAACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCTTCCCCTTTTCTTCTTaGTTCGAACCTGCAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: PWNRSYKLQCGCWQLYVGFPFSS*FEPADA Trigger: GGCATCTGCAGGTTCGAACAAAGAAGAAAAGGGGAA...GCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTTCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS GCA 90 bp | AGCACTAGTGATAACACGTGCATCCCAAGCAGCACTGTAGCAAAGTaGCATTGTGCCTGCTTCAGTCAAAGTCCGTGGAGGGATGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STSDNTCIPSSTVAK*HCACFSQSPWRDGF Trigger: GAACCCATCCCTCCACGGACTTTGACTGAAGCAGGCACAATGGCACTTTGCTACAGTGCTGCTTGGGATGCACGTGTTATCACTAGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | AACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCCCTGTGCTTGCTGTGGCTTCTTaGGAGTGCATGAAACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NRSYKLQCGCWQLYVGPVLAVAS*ECMKLF Trigger: GAACAGTTTCATGCACTCCAAAGAAGCCACAGCAAG...CACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS GCA 90 bp | AGACACCTGATGATGGTACACCCACCAAGCACTAGTGATAACACGTaGATCCCAAGCAGCACTGTAGCAAAGTGCCATTGTGCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RHLMMVHPPSTSDNT*IPSSTVAKCHCACF Trigger: GAAGCAGGCACAATGGCACTTTGCTACAGTGCTGCTTGGGATGCACGTGTTATCACTAGTGCTTGGTGGGTGTACCATCATCAGGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 90 bp | ATTTCTGTCCAGTCTATCTGGTTGGCCAACGCACTTCGGACTACCTaGATGGCTCTGTCCACTATCTGCAGGTTCATCTCTATGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISVQSIWLANALRTT*MALSTICRFISMSS Trigger: GGAGCTCATAGAGATGAACCTGCAGATAGTGGACAGAGCCATTCAGGTAGTCCGAAGTGCGTTGGCCAACCAGATAGACTGGACAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | AACAGGAGTTACAAGCTGCAATGTGGGTGCTGGCAACTGTACGTGGGCCCTGTGTCATCCACTTTAGCATaGCCAGAGAATCCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NRSYKLQCGCWQLYVGPVSSTLA*PENPLS Trigger: AGAAAGTGGATTCTCTGGCAATGCTAAAGTGGATGA...CACAGGGCCCACGTACAGTTGCCAGCACCCACATTGCAGCTTGTAACTCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS CCA 90 bp | GAGCTTCTTTCACAATCACTCCGATTTCTGTCCAGTCTATCTGGTTaGCCAACGCACTTCGGACTACCTGAATGGCTCTGTCCACTATCT | + |
|
Preference number: 5 (lower is better) Translates to: ELLSQSLRFLSSLSG*PTHFGLPEWLCPLS Trigger: AGATAGTGGACAGAGCCATTCAGGTAGTCCGAAGTGCGTTGGCCAACCAGATAGACTGGACAGAAATCGGAGTGATTGTGAAAGAAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS TCA 90 bp | GGACTACCTGAATGGCTCTGTCCACTATCTGCAGGTTCATCTCTATaGGCTCCCCTTTCAGTTTATCAATTTCCTGAGCCTGCTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLPEWLCPLSAGSSL*APLSVYQFPEPAEE Trigger: CTCTTCAGCAGGCTCAGGAAATTGATAAACTGAAAGGGGAGCTCATAGAGATGAACCTGCAGATAGTGGACAGAGCCATTCAGGTAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS TCA 90 bp | CTCTCCCACTGTGCACAGCAATGTCCTCTTGATCAACCTGAGTCATaGGTTCTACGTCTCCAGGCATTCCATGTAATTCCTCAGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSHCAQQCPLDQPES*VLRLQAFHVIPQSL Trigger: AAGAGACTGAGGAATTACATGGAATGCCTGGAGACGTAGAACTCATGACTCAGGTTGATCAAGAGGACATTGCTGTGCACAGTGGGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS-3UTR CAA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGTGCAACCGGGTCTCCTaGAGCTTGAGCTTCTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVCNRVS*SLSFFH Trigger: GTGAAAGAAGCTCAAGCTCAAGGAGACCCGGTTGCA...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS-3UTR CAA 90 bp | CCCCAATGCTGCCAGCACCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTGTTCACTTGTGCAGCTaGTCAGTGTTTCCATGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PQCCQHHPARKCTSVITGVHLCS*SVFPCL Trigger: AAGACATGGAAACACTGACAAGCTGCACAAGTGAAC...ACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGGTGCTGGCAGCATTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS-3UTR CAA 90 bp | CCCCAATGCTGCCAGCACCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTTCAAAGACTCTTCTCTaGGAGCCAGTTTCTGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQCCQHHPARKCTSVITGSKTLL*EPVSVE Trigger: CTCTACAGAAACTGGCTCCAAGAGAAGAGTCTTTGA...ACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGGTGCTGGCAGCATTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS TCA 90 bp | CACTTGTGCAGCTTGTCAGTGTTTCCATGTCTTCATCCTGCACTCTaGCTTTTCGTTCACCTCGATGTCTCCAGACACAAGACTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: HLCSLSVFPCLHPAL*LFVHLDVSRHKTHL Trigger: TAGATGAGTCTTGTGTCTGGAGACATCGAGGTGAACGAAAAGTCAGAGTGCAGGATGAAGACATGGAAACACTGACAAGCTGCACAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS GCA 90 bp | ATGAGTTCACTTGTGCAGCTTGTCAGTGTTTCCATGTCTTCATCCTaGACTCTGACTTTTCGTTCACCTCGATGTCTCCAGACACAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: MSSLVQLVSVSMSSS*TLTFRSPRCLQTQD Trigger: GTCTTGTGTCTGGAGACATCGAGGTGAACGAAAAGTCAGAGTGCAGGATGAAGACATGGAAACACTGACAAGCTGCACAAGTGAACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
||
| CDS-3UTR CAA 90 bp | CACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAGTGCTGAGGCCACTCAAATTCTGTaGTATGAATACGTATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HVCIVDLPKATNWLFSAEATQIL*YEYVYQ Trigger: CTGGTATACGTATTCATACAACAGAATTTGAGTGGC...CTCAGCACTGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 90 bp | CTTCACTGCTATCACCCCCTTCTAGTTGTTCCATTTCTTCTGCCATaGGTTCACTTGTGCAGCTTGTCAGTGTTTCCATGTCTTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: LHCYHPLLVVPFLLP*VHLCSLSVFPCLHP Trigger: AGGATGAAGACATGGAAACACTGACAAGCTGCACAAGTGAACTCATGGCAGAAGAAATGGAACAACTAGAAGGGGGTGATAGCAGTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 90 bp | AAAGACTCTTCTCTTGGAGCCAGTTTCTGTAGAGGCCGTTGGGACTaGAGATGGGACAAGTCAATGGTAGTATCAGGATATTCAAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: KDSSLGASFCRGRWD*RWDKSMVVSGYSKV Trigger: CACCTTTGAATATCCTGATACTACCATTGACTTGTCCCATCTTCAGTCCCAACGGCCTCTACAGAAACTGGCTCCAAGAGAAGAGTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CCA 90 bp | TCCTCCTCTGATAACAAGTATGGATTTCGTAGCAGCATCGTAACGTaGTTGGTTTGCAGTTTTAGCTCTTTGATTGCACATGCAACCGGG | + |
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Preference number: 5 (lower is better) Translates to: SSSDNKYGFRSSIVT*LVCSFSSLIAHATG Trigger: CCCGGTTGCATGTGCAATCAAAGAGCTAAAACTGCAAACCAACCACGTTACGATGCTGCTACGAAATCCATACTTGTTATCAGAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | ATAGGAGCCAGAAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCCGGGTCTCCTTGAGCTaGAGCTTCTTTCACAATCAC | + |
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Preference number: 5 (lower is better) Translates to: IGARRILVQESLVISLKARVSLS*SFFHNH Trigger: GTGATTGTGAAAGAAGCTCAAGCTCAAGGAGACCCG...GGCTTTTAGGCTTATCACTAAAGATTCCTGGACCAGTATTCTTCTGGCTCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 90 bp | TCAAAGGTGTCTTCCTCTTCTTCCTTCATTTCACCAATGGGCTCCTaGTCTTTTGTAACTGCTTTGGCTTCTCCATCTTCAGAGCTTAGT | + |
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Preference number: 5 (lower is better) Translates to: SKVSSSSSFISPMGS*SFVTALASPSSELS Trigger: ACTAAGCTCTGAAGATGGAGAAGCCAAAGCAGTTACAAAAGATCAGGAGCCCATTGGTGAAATGAAGGAAGAAGAGGAAGACACCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | ATAGGAGCCAGAAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCTATCTGCATCCAGGCTaGGTTTTGCCTCTCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: IGARRILVQESLVISLKAYLHPG*VLPLFS Trigger: AGAAAAGAGAGGCAAAACCAAGCCTGGATGCAGATA...GGCTTTTAGGCTTATCACTAAAGATTCCTGGACCAGTATTCTTCTGGCTCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | CCTGTTAACACGTCTGCATCGTTGACCTTCCAAAGGCTACAAACTGGCTGTTCAAATTCATCCACGGCCTaGTCAAATGATTCAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: PVNTSASLTFQRLQTGCSNSSTA*SNDSNS Trigger: AGAATTTGAATCATTTGACAAGGCCGTGGATGAATT...TGAACAGCCAGTTTGTAGCCTTTGGAAGGTCAACGATGCAGACGTGTTAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | ATAGGAGCCAGAAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCATTTCTCTTCTCTCCTaGGCTGACAAATGTCTTCGG | + |
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Preference number: 5 (lower is better) Translates to: IGARRILVQESLVISLKAISLLS*ADKCLR Trigger: CCGAAGACATTTGTCAGCCAAGGAGAGAAGAGAAAT...GGCTTTTAGGCTTATCACTAAAGATTCCTGGACCAGTATTCTTCTGGCTCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | CCACCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCACTGCCACATTTTTGCTaGTGTTTTGGTAAGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: PPSKKMHFCYYRSRYLSPLPHFC*CFGKLQ Trigger: CTGAAGCTTACCAAAACACAAGCAAAAATGTGGCAG...TGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | TATTCTGATAGGAGCCAGAAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAGATCGTGTTCCTCCTaGTCATCATGTGGATCATCG | + |
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Preference number: 5 (lower is better) Translates to: YSDRSQKNTGPGIFSDKPRSCSS*SSCGSS Trigger: CGATGATCCACATGATGACAAGGAGGAACACGATCT...AGGCTTATCACTAAAGATTCCTGGACCAGTATTCTTCTGGCTCCTATCAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 90 bp | CAAACTGGAAATCCACAATTCTGTCCACACCAAGCTGTTTTGCACTaGCTAATCTCCGACTCTTCAAATGTTTTCGACACTTCATGGCAA | + |
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Preference number: 5 (lower is better) Translates to: QTGNPQFCPHQAVLH*LISDSSNVFDTSWQ Trigger: TTGCCATGAAGTGTCGAAAACATTTGAAGAGTCGGAGATTAGTCAGTGCAAAACAGCTTGGTGTGGACAGAATTGTGGATTTCCAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021368.10 ENSMUST00000220484.2 |
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| CDS GCA 90 bp | CGTGAGTATGTCTTCAGCTGGTTTATCTGCATCCAGGCTTGGTTTTaGCTCTCTTTTCTGAATTATATAGCCCTTTCCATTGAAGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: REYVFSWFICIQAWF*LSFLNYIALSIEVG Trigger: TCCAACTTCAATGGAAAGGGCTATATAATTCAGAAAAGAGAGGCAAAACCAAGCCTGGATGCAGATAAACCAGCTGAAGACATACTCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS GCA 90 bp | AGGATGAAACTCCTCATACGTGAGTATGTCTTCAGCTGGTTTATCTaGATCCAGGCTTGGTTTTGCCTCTCTTTTCTGAATTATATAGCC | + |
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Preference number: 5 (lower is better) Translates to: RMKLLIREYVFSWFI*IQAWFCLSFLNYIA Trigger: GGCTATATAATTCAGAAAAGAGAGGCAAAACCAAGCCTGGATGCAGATAAACCAGCTGAAGACATACTCACGTATGAGGAGTTTCATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CCA 90 bp | CACTTTGTATTTATAGTTTGTCATGATGGTGTAAGGGGCACATATTaGAATAGCAAACATCAGTACATCCTCAGGATGTGGCTGCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: HFVFIVCHDGVRGTY*NSKHQYILRMWLPC Trigger: ACAGGGCAGCCACATCCTGAGGATGTACTGATGTTTGCTATTCCAATATGTGCCCCTTACACCATCATGACAAACTATAAATACAAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | CCCAGCAAGAAAATGCACTTCTGTTATTACAGGTCAAGATACTTGAGCCCAGTGATAAGTCTTTTTCTCTaGCTGTGGCTTCTTTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: PSKKMHFCYYRSRYLSPVISLFL*LWLLWS Trigger: ACTCCAAAGAAGCCACAGCAAGAGAAAAAGACTTAT...CACTGGGCTCAAGTATCTTGACCTGTAATAACAGAAGTGCATTTTCTTGCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CCA 90 bp | CTCATACGTGAGTATGTCTTCAGCTGGTTTATCTGCATCCAGGCTTaGTTTTGCCTCTCTTTTCTGAATTATATAGCCCTTTCCATTGAA | + |
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Preference number: 5 (lower is better) Translates to: LIREYVFSWFICIQA*FCLSFLNYIALSIE Trigger: TTCAATGGAAAGGGCTATATAATTCAGAAAAGAGAGGCAAAACCAAGCCTGGATGCAGATAAACCAGCTGAAGACATACTCACGTATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS-3UTR CAA 90 bp | AAGAACTCTCTTCAGCACTTCACCTTTAGGAGCAGCAGCTATTACTTCAGTCAAGCCACTCAAATTCTGTaGTATGAATACGTATACCAG | + |
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Preference number: 5 (lower is better) Translates to: KNSLQHFTFRSSSYYFSQATQIL*YEYVYQ Trigger: CTGGTATACGTATTCATACAACAGAATTTGAGTGGC...TTGACTGAAGTAATAGCTGCTGCTCCTAAAGGTGAAGTGCTGAAGAGAGTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220484.2 |
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| CDS-3UTR CAA 90 bp | AAGAATACTGGTCCAGGAATCTTTAGTGATAAGCCTAAAAGCCAAAAAGCATCTTGTAGCAAAGTGCCATaGTGCCTGCTTCAGTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: KNTGPGIFSDKPKSQKASCSKVP*CLLQSK Trigger: CTTTGACTGAAGCAGGCACAATGGCACTTTGCTACA...AGATGCTTTTTGGCTTTTAGGCTTATCACTAAAGATTCCTGGACCAGTATTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 90 bp | AAACTCGACGGCATCATGTTCTTAGGCCACTCAAATTCTGTTGTATaGATACGTATACCAGACTCAAGTAACAGTGTAGCTTTAAAATCA | + |
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Preference number: 5 (lower is better) Translates to: KLDGIMFLGHSNSVV*IRIPDSSNSVALKS Trigger: TGATTTTAAAGCTACACTGTTACTTGAGTCTGGTATACGTATTCATACAACAGAATTTGAGTGGCCTAAGAACATGATGCCGTCGAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021368.10 ENSMUST00000220484.2 ENSMUST00000222065.2 |
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| CDS CAA 72 bp | CACGTGCATCCCAAGCAGCACTGTAGCAAAGTGCCATaGTGCCTGCTTCAGTCAAAGTCCGTGGAGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: HVHPKQHCSKVP*CLLQSKSVEGW Trigger: CCATCCCTCCACGGACTTTGACTGAAGCAGGCACAATGGCACTTTGCTACAGTGCTGCTTGGGATGCACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS GCA 72 bp | GTGCATCCCAAGCAGCACTGTAGCAAAGTGCCATTGTaGCTGCTTCAGTCAAAGTCCGTGGAGGGATGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VHPKQHCSKVPL*LLQSKSVEGWV Trigger: AACCCATCCCTCCACGGACTTTGACTGAAGCAGGCACAATGGCACTTTGCTACAGTGCTGCTTGGGATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS GCA 72 bp | GATAACACGTGCATCCCAAGCAGCACTGTAGCAAAGTaGCATTGTGCCTGCTTCAGTCAAAGTCCGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: DNTCIPSSTVAK*HCACFSQSPWR Trigger: CCTCCACGGACTTTGACTGAAGCAGGCACAATGGCACTTTGCTACAGTGCTGCTTGGGATGCACGTGTTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CAA 72 bp | GCTGACAGGCTGAGATCCACATCTACAAGCAGCGGCTaGTTCTTCTGCGGCTTCTGCAGCTGCTTGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ADRLRSTSTSSG*FFCGFCSCLFF Trigger: AAAGAACAAGCAGCTGCAGAAGCCGCAGAAGAACAAGCCGCTGCTTGTAGATGTGGATCTCAGCCTGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 72 bp | CAGTCTATCTGGTTGGCCAACGCACTTCGGACTACCTaGATGGCTCTGTCCACTATCTGCAGGTTCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: QSIWLANALRTT*MALSTICRFIS Trigger: AGAGATGAACCTGCAGATAGTGGACAGAGCCATTCAGGTAGTCCGAAGTGCGTTGGCCAACCAGATAGACTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CCA 72 bp | GCAAAGTGCCATTGTGCCTGCTTCAGTCAAAGTCCGTaGAGGGATGGGTTCGCCTGTCGGATTCTTAATTAC | + |
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Preference number: 6 (lower is better) Translates to: AKCHCACFSQSP*RDGFACRILNY Trigger: GTAATTAAGAATCCGACAGGCGAACCCATCCCTCCACGGACTTTGACTGAAGCAGGCACAATGGCACTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS GCA 72 bp | ATGATGGTACACCCACCAAGCACTAGTGATAACACGTaGATCCCAAGCAGCACTGTAGCAAAGTGCCATTGT | + |
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Preference number: 6 (lower is better) Translates to: MMVHPPSTSDNT*IPSSTVAKCHC Trigger: ACAATGGCACTTTGCTACAGTGCTGCTTGGGATGCACGTGTTATCACTAGTGCTTGGTGGGTGTACCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS GCA 72 bp | CTTGTGCAGCTTGTCAGTGTTTCCATGTCTTCATCCTaGACTCTGACTTTTCGTTCACCTCGATGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVQLVSVSMSSS*TLTFRSPRCLQ Trigger: CTGGAGACATCGAGGTGAACGAAAAGTCAGAGTGCAGGATGAAGACATGGAAACACTGACAAGCTGCACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CAA 90 bp | TCCTTCACACTTCGGAATAAGTCTTTTTCTCTTGCTGTGGCTTCTTaGGAGTGCATGAAACTGTTCAAGGCTGTCTTCGCAGCTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SFTLRNKSFSLAVAS*ECMKLFKAVFAAFP Trigger: GGGGAAAGCTGCGAAGACAGCCTTGAACAGTTTCATGCACTCCAAAGAAGCCACAGCAAGAGAAAAAGACTTATTCCGAAGTGTGAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 72 bp | AGCTTGTCAGTGTTTCCATGTCTTCATCCTGCACTCTaGCTTTTCGTTCACCTCGATGTCTCCAGACACAAG | + |
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Preference number: 6 (lower is better) Translates to: SLSVFPCLHPAL*LFVHLDVSRHK Trigger: CTTGTGTCTGGAGACATCGAGGTGAACGAAAAGTCAGAGTGCAGGATGAAGACATGGAAACACTGACAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 72 bp | AGTCTTTTTCTCTTGCTGTGGCTTCTTTGGAGTGCATaGAACTGTTCAAGGCTGTCTTCGCAGCTTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SLFLLLWLLWSA*NCSRLSSQLSP Trigger: AGGGGAAAGCTGCGAAGACAGCCTTGAACAGTTTCATGCACTCCAAAGAAGCCACAGCAAGAGAAAAAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CAA 72 bp | CATTGGCTGTCCAGCTGCCACATTTTTGCTTGTGTTTaGGTAAGCTTCAGTGTGCACAGCACTTTCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: HWLSSCHIFACV*VSFSVHSTFSL Trigger: GAGAGAGAAAGTGCTGTGCACACTGAAGCTTACCAAAACACAAGCAAAAATGTGGCAGCTGGACAGCCAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CCA 72 bp | AGGATGAAACTCCTCATACGTGAGTATGTCTTCAGCTaGTTTATCTGCATCCAGGCTTGGTTTTGCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RMKLLIREYVFS*FICIQAWFCLS Trigger: AGAGAGGCAAAACCAAGCCTGGATGCAGATAAACCAGCTGAAGACATACTCACGTATGAGGAGTTTCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CAA 90 bp | TCCTCTGATAACAAGTATGGATTTCGTAGCAGCATCGTAACGTGGTaGGTTTGCAGTTTTAGCTCTTTGATTGCACATGCAACCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSDNKYGFRSSIVTW*VCSFSSLIAHATGS Trigger: AGACCCGGTTGCATGTGCAATCAAAGAGCTAAAACTGCAAACCAACCACGTTACGATGCTGCTACGAAATCCATACTTGTTATCAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 72 bp | GTCAAAGAGTCAAATAGATTTTCCTCATTCCCCTGCTaGTCCAGATCGTGTTCCTCCTTGTCATCATGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VKESNRFSSFPC*SRSCSSLSSCG Trigger: TCCACATGATGACAAGGAGGAACACGATCTGGATCAGCAGGGGAATGAGGAAAATCTATTTGACTCTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS CAA 72 bp | CTTCGGAATAAGTCTTTTTCTCTTGCTGTGGCTTCTTaGGAGTGCATGAAACTGTTCAAGGCTGTCTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: LRNKSFSLAVAS*ECMKLFKAVFA Trigger: TGCGAAGACAGCCTTGAACAGTTTCATGCACTCCAAAGAAGCCACAGCAAGAGAAAAAGACTTATTCCGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 72 bp | TCTTCCTCTTCTTCCTTCATTTCACCAATGGGCTCCTaGTCTTTTGTAACTGCTTTGGCTTCTCCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSSSFISPMGS*SFVTALASPSS Trigger: TGAAGATGGAGAAGCCAAAGCAGTTACAAAAGATCAGGAGCCCATTGGTGAAATGAAGGAAGAAGAGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS GCA 72 bp | GGAATAGCAAACATCAGTACATCCTCAGGATGTGGCTaGCCTGTCAAAGAGTCAAATAGATTTTCCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: GIANISTSSGCG*PVKESNRFSSF Trigger: GAATGAGGAAAATCTATTTGACTCTTTGACAGGGCAGCCACATCCTGAGGATGTACTGATGTTTGCTATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021368.10 |
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| CDS TCA 72 bp | AATCCACAATTCTGTCCACACCAAGCTGTTTTGCACTaGCTAATCTCCGACTCTTCAAATGTTTTCGACACT | + |
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Preference number: 6 (lower is better) Translates to: NPQFCPHQAVLH*LISDSSNVFDT Trigger: AGTGTCGAAAACATTTGAAGAGTCGGAGATTAGTCAGTGCAAAACAGCTTGGTGTGGACAGAATTGTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021368.10 ENSMUST00000220484.2 |
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| CDS TCA 72 bp | GGCATCATGTTCTTAGGCCACTCAAATTCTGTTGTATaGATACGTATACCAGACTCAAGTAACAGTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: GIMFLGHSNSVV*IRIPDSSNSVA Trigger: AGCTACACTGTTACTTGAGTCTGGTATACGTATTCATACAACAGAATTTGAGTGGCCTAAGAACATGATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021368.10 ENSMUST00000220484.2 ENSMUST00000222065.2 |
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