RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NELL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055409

Ensembl transcript IDs: ENSMUST00000081872.13, ENSMUST00000107603.2, ENSMUST00000151721.8

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGTCCTGTTGAGTGCTGTGGGTGCAGCACTAGGTCTGTGGCACTaGGTCACAGTCCAGCTGGACACCATGGATATACCTCAAATTTCT +
Preference number: 1 (lower is better)
Translates to: CVLLSAVGAALGLWH*VTVQLDTMDIPQIS
Trigger: AGAAATTTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAGTGCCACAGACCTAGTGCTGCACCCACAGCACTCAACAGGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 90 bp GCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATaGTACACATCTCCATCAACACGTCCCTCAGGAACCGCCATTCTG +
Preference number: 1 (lower is better)
Translates to: ASVFNSLKQKDAVDR*YTSPSTRPSGTAIL
Trigger: CAGAATGGCGGTTCCTGAGGGACGTGTTGATGGAGATGTGTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 90 bp TATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAAGTaGTATACCACTGAGCCACACGCACAGCCTCCAGACCAATGCAAT +
Preference number: 1 (lower is better)
Translates to: YDVGDGSKGCTYTTK*YTTEPHAQPPDQCN
Trigger: ATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCACTTGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CCA 90 bp ATTGATCAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTaGGAGCAATCACCAAGCCAAACTTGTCTTAAAGGCTTTCCCCCT +
Preference number: 1 (lower is better)
Translates to: IDQSVSKSASREQLT*EQSPSQTCLKGFPP
Trigger: AGGGGGAAAGCCTTTAAGACAAGTTTGGCTTGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTGATCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CCA 90 bp TTTGCTGTTCTTGCAGAGATCTGGCTTCTATTCCCAGCACCCATGTaGCAGTTAACCAACATCTGTAACTTCAGTTCTAGGGGCAGGGTA +
Preference number: 1 (lower is better)
Translates to: FAVLAEIWLLFPAPM*QLTNICNFSSRGRV
Trigger: TACCCTGCCCCTAGAACTGAAGTTACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGCAAGAACAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 90 bp ACCAAGTGCTATACCACTGAGCCACACGCACAGCCTCCAGACCAATaGAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTGCTAAGT +
Preference number: 1 (lower is better)
Translates to: TKCYTTEPHAQPPDQ*NLIMFIPSLPTLLS
Trigger: ACTTAGCAGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCACTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR TCA 90 bp TTGCTGCTGTTATATGAATGCCTCTCTATGTTTCCCAGGATAGATTaGAATCATGAAGCCAAGGGATTCCCTGTTCTACTTCCACCTCCA +
Preference number: 1 (lower is better)
Translates to: LLLLYECLSMFPRID*NHEAKGFPVLLPPP
Trigger: TGGAGGTGGAAGTAGAACAGGGAATCCCTTGGCTTCATGATTTCAATCTATCCTGGGAAACATAGAGAGGCATTCATATAACAGCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 90 bp TCGAACAGGAGGACGCTGTTTCACGCAGAGATCTGTAGATGCAGTTaGAAGTCCTGTAAATGTCTTTGTTTTTATAACATTGGAAAGGCT +
Preference number: 1 (lower is better)
Translates to: SNRRTLFHAEICRCS*KSCKCLCFYNIGKA
Trigger: AGCCTTTCCAATGTTATAAAAACAAAGACATTTACAGGACTTGCAACTGCATCTACAGATCTCTGCGTGAAACAGCGTCCTCCTGTTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR TCA 90 bp TCCCCTTTAGTGTATCATAATTGCCCTAAGCAGTTTTTAGCTGAGTaGGTGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGT +
Preference number: 1 (lower is better)
Translates to: SPLVYHNCPKQFLAE*VGICVQQFETERCC
Trigger: ACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCACTCACTCAGCTAAAAACTGCTTAGGGCAATTATGATACACTAAAGGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CCA 90 bp TGTCTTGGAGAAACAGTTCTAAGACATACATATGTACTTTCTCTGTaGCAGAGGTCAGCAGACTTTCTACAGAGGAGGAAAAGAATAGTG +
Preference number: 1 (lower is better)
Translates to: CLGETVLRHTYVLSL*QRSADFLQRRKRIV
Trigger: CACTATTCTTTTCCTCCTCTGTAGAAAGTCTGCTGACCTCTGCCACAGAGAAAGTACATATGTATGTCTTAGAACTGTTTCTCCAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR TCA 90 bp TGGAATCCTTTAAATGTATCTGTAAATGATCTGACAAGGGAAATGTaGTTTACAGCACGGAGACTCAACAACCATCGACCGAAATACACG +
Preference number: 1 (lower is better)
Translates to: WNPLNVSVNDLTREM*FTARRLNNHRPKYT
Trigger: CGTGTATTTCGGTCGATGGTTGTTGAGTCTCCGTGCTGTAAATCACATTTCCCTTGTCAGATCATTTACAGATACATTTAAAGGATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
3UTR CAA 90 bp TGCTATACCACTGAGCCACACGCACAGCCTCCAGACCAATGCAATTaGATCATGTTTATTCCTTCTCTCCCAACTCTGCTAAGTTCCACC +
Preference number: 2 (lower is better)
Translates to: CYTTEPHAQPPDQCN*IMFIPSLPTLLSST
Trigger: GGTGGAACTTAGCAGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR CCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTCCTCTTCCTCAGGTTaGATGGTCATTTTGTCCATT +
Preference number: 2 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFSSSSG*MVILSI
Trigger: AATGGACAAAATGACCATCCAACCTGAGGAAGAGGA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
3UTR-3UTR CCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTTCCTCAGGTTGGATaGTCATTTTGTCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFLPQVG*SFCPFS
Trigger: AGAAAATGGACAAAATGACCATCCAACCTGAGGAAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
3UTR-3UTR CCA 90 bp TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACTCCTCTTCCTCAGGTTaGATGGTCATTTTGTCCATT +
Preference number: 2 (lower is better)
Translates to: WASVFNSLKQKDAVDRCYSSSSG*MVILSI
Trigger: AATGGACAAAATGACCATCCAACCTGAGGAAGAGGA...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR TCA 90 bp ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTCTGTGTTCAACAGTTTaGAACAGAAAGATGCTGTGG +
Preference number: 2 (lower is better)
Translates to: TASRPMQFDHVYSFSPNSLCSTV*NRKMLW
Trigger: CCACAGCATCTTTCTGTTTCAAACTGTTGAACACAG...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR GCA 90 bp ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTTATTGTTGCTGTTGCTaGTGTTATATGAATGCCTCT +
Preference number: 2 (lower is better)
Translates to: TASRPMQFDHVYSFSPNSYCCCC*CYMNAS
Trigger: AGAGGCATTCATATAACAGCAGCAACAGCAACAATA...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR TCA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGATAGATTGAAATCATaGAGCCAAGGGATTCCCTGT +
Preference number: 2 (lower is better)
Translates to: LFVFMMLGMEARVVHILPDRLKS*SQGIPC
Trigger: ACAGGGAATCCCTTGGCTTCATGATTTCAATCTATC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR CCA 90 bp ATTGTGATTCATCACATAGAGTCGGTTTCATGTAGAGCACTCCATTTTCCCAAACTTCCTCAGGTTGGATaGTCATTTTGTCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: IVIHHIESVSCRALHFPKLPQVG*SFCPFS
Trigger: AGAAAATGGACAAAATGACCATCCAACCTGAGGAAG...TTTGGGAAAATGGAGTGCTCTACATGAAACCGACTCTATGTGATGAATCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR GCA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCTTTGAAACAGAAAGATaGTGTGGACAGATGCTACAC +
Preference number: 2 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVFETER*CGQMLH
Trigger: GTGTAGCATCTGTCCACAGCATCTTTCTGTTTCAAA...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR GCA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATCTGTTAAGAGCATTTaGTGTTCTTGCAGAGATCTG +
Preference number: 2 (lower is better)
Translates to: LFVFMMLGMEARVVHILPSVKSI*CSCRDL
Trigger: CAGATCTCTGCAAGAACAGCAAATGCTCTTAACAGA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR GCA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCTGTAATTTATCACATTaGATCGGGCTTTGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVCNLSH*IGLCQV
Trigger: CACTTGGCAAAGCCCGATGCAATGTGATAAATTACA...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR GCA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCATCTGTAGATGCAGTTaGAAGTCCTGTAAATGTCTT +
Preference number: 2 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVICRCS*KSCKCL
Trigger: AAGACATTTACAGGACTTGCAACTGCATCTACAGAT...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CAA 90 bp TGTCTATCTCCTAAGAAGATCGAGTCATCAAATGTTACTCTTAACTaGTCATTAAGTAGCTACCATTTTTCTCTTGCAAACTTCAGAGTG +
Preference number: 2 (lower is better)
Translates to: CLSPKKIESSNVTLN*SLSSYHFSLANFRV
Trigger: CACTCTGAAGTTTGCAAGAGAAAAATGGTAGCTACTTAATGACAAGTTAAGAGTAACATTTGATGACTCGATCTTCTTAGGAGATAGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CCA 72 bp TTGAGTGCTGTGGGTGCAGCACTAGGTCTGTGGCACTaGGTCACAGTCCAGCTGGACACCATGGATATACCT +
Preference number: 3 (lower is better)
Translates to: LSAVGAALGLWH*VTVQLDTMDIP
Trigger: AGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAGTGCCACAGACCTAGTGCTGCACCCACAGCACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 72 bp GGGGATGGAAGCAAGGGTTGTACATATACTACCAAGTaGTATACCACTGAGCCACACGCACAGCCTCCAGAC +
Preference number: 3 (lower is better)
Translates to: GDGSKGCTYTTK*YTTEPHAQPPD
Trigger: GTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCACTTGGTAGTATATGTACAACCCTTGCTTCCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CCA 72 bp TCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTaGGAGCAATCACCAAGCCAAACTTGTCTTAAAGGC +
Preference number: 3 (lower is better)
Translates to: SVSKSASREQLT*EQSPSQTCLKG
Trigger: GCCTTTAAGACAAGTTTGGCTTGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CCA 72 bp GTCTGTGGCACTGGGTCACAGTCCAGCTGGACACCATaGATATACCTCAAATTTCTGGACTCAGTCTATAGG +
Preference number: 3 (lower is better)
Translates to: VCGTGSQSSWTP*IYLKFLDSVYR
Trigger: CCTATAGACTGAGTCCAGAAATTTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAGTGCCACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR TCA 72 bp CCAGAACTGTTGCCTATTCTCACACTGTACTCTCTATaGCAATGTTGTCAGGCCAGTGACAGTAGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PELLPILTLYSL*QCCQASDSRRE
Trigger: CTCCCTCCTACTGTCACTGGCCTGACAACATTGTCATAGAGAGTACAGTGTGAGAATAGGCAACAGTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR CAA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTCCTCTTCCTCAGGTaGGATGGTCATTTTGTCCAT +
Preference number: 3 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFLLFLR*DGHFVH
Trigger: ATGGACAAAATGACCATCCAACCTGAGGAAGAGGAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
3UTR TCA 72 bp CAAGGGTTGTACATATACTACCAAGTGCTATACCACTaGGCCACACGCACAGCCTCCAGACCAATGCAATTT +
Preference number: 3 (lower is better)
Translates to: QGLYIYYQVLYH*ATRTASRPMQF
Trigger: AAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCACTTGGTAGTATATGTACAACCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 72 bp TGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTaGTGTTCTTGCAGAGATCTGGCTTCTATTCCCAGC +
Preference number: 3 (lower is better)
Translates to: WGWKTVSSVKSI*CSCRDLASIPS
Trigger: GCTGGGAATAGAAGCCAGATCTCTGCAAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CCA 72 bp CTTGCAGAGATCTGGCTTCTATTCCCAGCACCCATGTaGCAGTTAACCAACATCTGTAACTTCAGTTCTAGG +
Preference number: 3 (lower is better)
Translates to: LAEIWLLFPAPM*QLTNICNFSSR
Trigger: CCTAGAACTGAAGTTACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CCA 72 bp GTTCTACTTCCACCTCCACCCTCCAATACCAATGTCTaGAACTACAAGCACATGCCACCTTATCTGGATCAA +
Preference number: 3 (lower is better)
Translates to: VLLPPPPSNTNV*NYKHMPPYLDQ
Trigger: TTGATCCAGATAAGGTGGCATGTGCTTGTAGTTCCAGACATTGGTATTGGAGGGTGGAGGTGGAAGTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CCA 72 bp GTCAGGCCAGTGACAGTAGGAGGGAGAGCATCATCTTaGGATTACATTTCTTGCCAATTGACCATGTCTATC +
Preference number: 3 (lower is better)
Translates to: VRPVTVGGRASS*DYISCQLTMSI
Trigger: GATAGACATGGTCAATTGGCAAGAAATGTAATCCCAAGATGATGCTCTCCCTCCTACTGTCACTGGCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR TCA 72 bp ATGCCTCTCTATGTTTCCCAGGATAGATTGAAATCATaGAGCCAAGGGATTCCCTGTTCTACTTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: MPLYVSQDRLKS*SQGIPCSTSTS
Trigger: GGAGGTGGAAGTAGAACAGGGAATCCCTTGGCTTCATGATTTCAATCTATCCTGGGAAACATAGAGAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 72 bp TTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATaGTACACATCTCCATCAACACGTCCCTCAGGAACC +
Preference number: 3 (lower is better)
Translates to: FNSLKQKDAVDR*YTSPSTRPSGT
Trigger: GGTTCCTGAGGGACGTGTTGATGGAGATGTGTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 72 bp TATACCACTGAGCCACACGCACAGCCTCCAGACCAATaGAATTTGATCATGTTTATTCCTTCTCTCCCAACT +
Preference number: 3 (lower is better)
Translates to: YTTEPHAQPPDQ*NLIMFIPSLPT
Trigger: AGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR CAA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTCTCCTCTTCCTCAGGTaGGATGGTCATTTTGTCCAT +
Preference number: 3 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLLLFLR*DGHFVH
Trigger: ATGGACAAAATGACCATCCAACCTGAGGAAGAGGAG...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR TCA 72 bp TTTCCATTCAAAACCTACTGGACAAACACAACATTCTaGGGTCTGACACAGCTGTGTCCTGTTGAGTGCTGT +
Preference number: 3 (lower is better)
Translates to: FPFKTYWTNTTF*GLTQLCPVECC
Trigger: ACAGCACTCAACAGGACACAGCTGTGTCAGACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 72 bp TTTATCCATAGAGCAATGTCCTTAGAGGAACAGCACTaGGCAGGAATCAGAAACCTTAACTGTCAGGTGCAA +
Preference number: 3 (lower is better)
Translates to: FIHRAMSLEEQH*AGIRNLNCQVQ
Trigger: TTGCACCTGACAGTTAAGGTTTCTGATTCCTGCGCAGTGCTGTTCCTCTAAGGACATTGCTCTATGGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 72 bp AACAGGAGGACGCTGTTTCACGCAGAGATCTGTAGATaGAGTTGCAAGTCCTGTAAATGTCTTTGTTTTTAT +
Preference number: 3 (lower is better)
Translates to: NRRTLFHAEICR*SCKSCKCLCFY
Trigger: ATAAAAACAAAGACATTTACAGGACTTGCAACTGCATCTACAGATCTCTGCGTGAAACAGCGTCCTCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR CAA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTTCTGTGTTCAACAGTTaGAAACAGAAAGATGCTGTG +
Preference number: 3 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLSVFNS*KQKDAV
Trigger: CACAGCATCTTTCTGTTTCAAACTGTTGAACACAGA...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR-3UTR CAA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCGAGCATTTGCTGTTCTaGCAGAGATCTGGCTTCTAT +
Preference number: 3 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVEHLLF*QRSGFY
Trigger: ATAGAAGCCAGATCTCTGCAAGAACAGCAAATGCTC...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR GCA 72 bp AGCACTGCGCAGGAATCAGAAACCTTAACTGTCAGGTaGAAAGGACATAAACCAAATACTCTGAAAAGAATA +
Preference number: 3 (lower is better)
Translates to: STAQESETLTVR*KGHKPNTLKRI
Trigger: TATTCTTTTCAGAGTATTTGGTTTATGTCCTTTGCACCTGACAGTTAAGGTTTCTGATTCCTGCGCAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR TCA 72 bp TTATATGAATGCCTCTCTATGTTTCCCAGGATAGATTaGAATCATGAAGCCAAGGGATTCCCTGTTCTACTT +
Preference number: 3 (lower is better)
Translates to: LYECLSMFPRID*NHEAKGFPVLL
Trigger: AAGTAGAACAGGGAATCCCTTGGCTTCATGATTTCAATCTATCCTGGGAAACATAGAGAGGCATTCATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCCAGGCAGGGGTCACTaGCACAGCGGGGACAACACT +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFPGRGH*HSGDNT
Trigger: AGTGTTGTCCCCGCTGTGTCAGTGACCCCTGCCTGG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAGTATCACCCCTGAGGTaGACGGCTTCTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: QSVSKSASREQLTWEQSPVSPLR*TASAAL
Trigger: CAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATAC...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCGACAGTATCACCCCTaGGGTGGACGGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGRQYHP*GGRLLL
Trigger: CAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTACTGTCCATCGGCCATaGGGTAGGGAAGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGTVHRP*GREGPQ
Trigger: CTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGACCTCGGCAGACCCTaGAGCACTGGTTCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGDLGRP*STGSPE
Trigger: TTCCGGAGAACCAGTGCTGCAGGGTCTGCCGAGGTC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGCCCAGCACTGTCCTaGCGGTGCACACACAGAACC +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGSPALS*RCTHRT
Trigger: GGTTCTGTGTGTGCACCGCCAGGACAGTGCTGGGCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGTCCAGCCACCTGAGTaGCGCCCAGGGTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSVQPPE*RPGWCS
Trigger: TGAACACCACCCTGGGCGTCACTCAGGTGGCTGGAC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTACATGGAGTAGGAGGTaGGAGGCGCTCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGTWSRR*EALTDS
Trigger: GCTGTCTGTGAGCGCCTCTCACCTCCTACTCCATGT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTATCACCCCTGAGGTaGACGGCTTCTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGVSPLR*TASAAL
Trigger: CAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGACATCGGCACTGCTaGCAGCTGTGGGTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGRHRHC*QLWVQL
Trigger: CAACTGGACCCACAGCTGCCAGCAGTGCCGATGTCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTGCACTGTCCTGGCGGTaGACACACAGAACCACAAAA +
Preference number: 4 (lower is better)
Translates to: AEIWLLFPAPMWQLTNICALSWR*THRTTK
Trigger: TTTTGTGGTTCTGTGTGTGCACCGCCAGGACAGTGC...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTACTGTCCATCGGCCATaGGGTAGGGAAGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSTVHRP*GREGPQ
Trigger: CTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCATGCATGTTGGGCAAGTaGGATTTAGGTTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: QSVSKSASREQLTWEQSPCMLGK*DLGWGT
Trigger: AGTGCCCCAACCTAAATCGCACTTGCCCAACATGCA...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTCATGGAAACCGCTTCTaGACTCACAGTGGTACCACC +
Preference number: 4 (lower is better)
Translates to: AEIWLLFPAPMWQLTNICHGNRF*THSGTT
Trigger: GGTGGTACCACTGTGAGTGCAGAAGCGGTTTCCATG...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTAGCAGCCCACTCACTTaGCAGGTCTTCTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFSSPLT*QVFSQW
Trigger: CCACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCACACACGGATGTATCCTaGGATGCAGTCACAGCGATA +
Preference number: 4 (lower is better)
Translates to: QSVSKSASREQLTWEQSPHTDVS*DAVTAI
Trigger: TATCGCTGTGACTGCATCCCAGGATACATCCGTGTG...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTCCTGGTGTCACACTCTaGGCAGCAGAAAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: AEIWLLFPAPMWQLTNICPGVTL*AAEKVN
Trigger: GTTGACCTTTTCTGCTGCCCAGAGTGTGACACCAGG...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGTGATGATGTCCATCTaGAGGTCAGGGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFVMMSI*RSGSIP
Trigger: TGGGATGGACCCTGACCTTCAGATGGACATCATCAC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGCTTCTCACTCACATaGGGGGCTGAGTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGSFSLT*GAEWIS
Trigger: AGAGATCCACTCAGCCCCTCATGTGAGTGAGAAGCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTAGTCTGGGGAACAGTTaGGTGGGGGACAGGACATCC +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSSLGNS*VGDRTS
Trigger: GGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCACAGTGGCTTCCTGTaGATCCAGAAGGACAGACAC +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFHSGFL*IQKDRH
Trigger: GTGTCTGTCCTTCTGGATTCACAGGAAGCCACTGTG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCACTCCCATTCTTGCATTaGCAGGTTGTACAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QSVSKSASREQLTWEQSPLPFLH*QVVQGD
Trigger: ATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAG...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGCACTGTCCTGGCGGTaGACACACAGAACCACAAAA +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFALSWR*THRTTK
Trigger: TTTTGTGGTTCTGTGTGTGCACCGCCAGGACAGTGC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTTGCATGTGCAGTTCCTaGAGTTGTCACCATCTACCC +
Preference number: 4 (lower is better)
Translates to: AEIWLLFPAPMWQLTNICCMCSS*SCHHLP
Trigger: GGGTAGATGGTGACAACTGCAGGAACTGCACATGCA...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTCAGAATCCACACCTaGCCATTATGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFLRIHT*PLCFSP
Trigger: GGGGCTGAAGCATAATGGGCAGGTGTGGATTCTGAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTACATGGAGTAGGAGGTaGGAGGCGCTCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLTWSRR*EALTDS
Trigger: GCTGTCTGTGAGCGCCTCTCACCTCCTACTCCATGT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTCTTACAGGAACAGACTaGACACCTGTCTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AEIWLLFPAPMWQLTNICLTGTD*TPVFSQ
Trigger: CTGAGAGAAGACAGGTGTTCAGTCTGTTCCTGTAAG...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTGCATGTTGGGCAAGTaGGATTTAGGTTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFCMLGK*DLGWGT
Trigger: AGTGCCCCAACCTAAATCGCACTTGCCCAACATGCA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTGCATGTGCAGTTCCTaGAGTTGTCACCATCTACCC +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFCMCSS*SCHHLP
Trigger: GGGTAGATGGTGACAACTGCAGGAACTGCACATGCA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCCACAGCACCACTTTTaGATGTGCAGTTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGPQHHF*MCSSCS
Trigger: ACTGCAGGAACTGCACATGCAAAAGTGGTGCTGTGG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCCACAGCACCACTTTTaGATGTGCAGTTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFPQHHF*MCSSCS
Trigger: ACTGCAGGAACTGCACATGCAAAAGTGGTGCTGTGG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAACACTTAGGTGCTTCTaGACAGAAGTTATGACCTCG +
Preference number: 4 (lower is better)
Translates to: QSVSKSASREQLTWEQSPTLRCF*TEVMTS
Trigger: CGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGT...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCACACGGATGTATCCTaGGATGCAGTCACAGCGATA +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFHTDVS*DAVTAI
Trigger: TATCGCTGTGACTGCATCCCAGGATACATCCGTGTG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGTACAGCTGTGTCCCTaGACTGTGTTGGTACAGATG +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFVQLCP*TVLVQM
Trigger: CATCTGTACCAACACAGTCCAGGGACACAGCTGTAC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTATTTCCCACGTAGCCTaGCTGGCAGGTACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSISHVA*LAGTAV
Trigger: CACAGCTGTACCTGCCAGCCAGGCTACGTGGGAAAT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTTAACGCAGCGGGAGTaGTTGTGGCACTCAACGAAT +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGLTQRE*LWHSTN
Trigger: ATTCGTTGAGTGCCACAACCACTCCCGCTGCGTTAA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCACTGCTGGCAGCTGTaGGTCCAGTTGTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSHCWQL*VQLSPL
Trigger: AAGTGGAGACAACTGGACCCACAGCTGCCAGCAGTG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGTGATGATGTCCATCTaGAGGTCAGGGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSVMMSI*RSGSIP
Trigger: TGGGATGGACCCTGACCTTCAGATGGACATCATCAC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGAGGGCAAGCTTCTGTaGTTTTTACCAAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFEGKLL*FLPRLH
Trigger: GTGGAGTCTTGGTAAAAATCACAGAAGCTTGCCCTC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACCACAGTGGCTTCCTGTaGATCCAGAAGGACAGACAC +
Preference number: 4 (lower is better)
Translates to: WASVFNSLKQKDAVDRCYHSGFL*IQKDRH
Trigger: GTGTCTGTCCTTCTGGATTCACAGGAAGCCACTGTG...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTTACAGGAACAGACTaGACACCTGTCTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGLTGTD*TPVFSQ
Trigger: CTGAGAGAAGACAGGTGTTCAGTCTGTTCCTGTAAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCCCAGGCAGGGGTCACTaGCACAGCGGGGACAACACT +
Preference number: 4 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVPGRGH*HSGDNT
Trigger: AGTGTTGTCCCCGCTGTGTCAGTGACCCCTGCCTGG...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTCCCATTCTTGCATTaGCAGGTTGTACAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFLPFLH*QVVQGD
Trigger: ATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAGCTCATAAATCCTATTaGAGTCGACATGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: QSVSKSASREQLTWEQSPAHKSY*SRHGVG
Trigger: TCCTACTCCATGTCGACTGCAATAGGATTTATGAGC...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCACCACTTTTGCATGTaGAGTTCCTGCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFHHFCM*SSCSCH
Trigger: GTGACAACTGCAGGAACTGCACATGCAAAAGTGGTG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCATTGGCCAGAAATATaGACAGGAAGTGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGHWPEI*TGSESG
Trigger: CCCAGACTCACTTCCTGTGCATATTTCTGGCCAATG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGGTACCTCCGTATCTaGAACCCTCTTCACAGAATG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGRYLRI*NPLHRM
Trigger: CATTCTGTGAAGAGGGTTGCAGATACGGAGGTACCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTATTCATCAATATCAATaGAGGACTCCCCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AEIWLLFPAPMWQLTNICIHQYQ*RTPRTV
Trigger: CACTGTCCGGGGAGTCCTGCATTGATATTGATGAAT...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACGCGTATCTCTTCTCTTaGGCCACTGCTCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: WASVFNSLKQKDAVDRCYAYLFS*ATALQF
Trigger: GAACTGGAGAGCAGTGGCCCAAGAGAAGAGATACGC...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGCGTATCTCTTCTCTTaGGCCACTGCTCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSAYLFS*ATALQF
Trigger: GAACTGGAGAGCAGTGGCCCAAGAGAAGAGATACGC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTAGCAGCCCACTCACTTaGCAGGTCTTCTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: TASRPMQFDHVYSFSPNSSSPLT*QVFSQW
Trigger: CCACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCT...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTATTCCCGGCAGGTCTTaGTTAAAATCCGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSIPGRS*LKSAGP
Trigger: AGGGCCAGCGGATTTTAACCAAGACCTGCCGGGAAT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCCTGGTGTCACACTCTaGGCAGCAGAAAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSPGVTL*AAEKVN
Trigger: GTTGACCTTTTCTGCTGCCCAGAGTGTGACACCAGG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTCACTGCTGGCAGCTGTaGGTCCAGTTGTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLHCWQL*VQLSPL
Trigger: AAGTGGAGACAACTGGACCCACAGCTGCCAGCAGTG...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTGTCCAGCCACCTGAGTaGCGCCCAGGGTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVVQPPE*RPGWCS
Trigger: TGAACACCACCCTGGGCGTCACTCAGGTGGCTGGAC...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCCGACAGTATCACCCCTaGGGTGGACGGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVRQYHP*GGRLLL
Trigger: CAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCG...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAATATGATCCTTCTCTaGGCAGTTCAAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGNMILL*AVQRRA
Trigger: TGCCCTCCTTTGAACTGCTCAGAGAAGGATCATATT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTTCTCCGGAAGAATATaGTCCTTCTCTGAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFFSGRI*SFSEQF
Trigger: GAACTGCTCAGAGAAGGATCATATTCTTCCGGAGAA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTATCCTCCTGCTAAGTTaGTGCAGGCAGAGTCATTCC +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSILLLS*CRQSHS
Trigger: GGAATGACTCTGCCTGCATCAACTTAGCAGGAGGAT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGACCTCGGCAGACCCTaGAGCACTGGTTCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: LFVFMMLGMEARVVHILPDLGRP*STGSPE
Trigger: TTCCGGAGAACCAGTGCTGCAGGGTCTGCCGAGGTC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACACTTAGGTGCTTCTaGACAGAAGTTATGACCTCG +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFTLRCF*TEVMTS
Trigger: CGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGATATCTTCACAGTATaGAGAGTTGCCCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFDIFTV*RVALDR
Trigger: TCTGTCCAGGGCAACTCTGCATACTGTGAAGATATC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTCTTCACAGAATGCTTTaGAGACAGTACCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: AEIWLLFPAPMWQLTNICLHRML*RQYHFP
Trigger: TGGGAAATGGTACTGTCTGCAAAGCATTCTGTGAAG...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGACTCTCCCATTCTTaGATTGACAGGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGRLSHS*IDRLYR
Trigger: CCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTAGACTCTCCCATTCTTaGATTGACAGGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFRLSHS*IDRLYR
Trigger: CCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACAGAAATGCCTTACTaGCATTGTGTAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFTEMPY*HCVVQP
Trigger: TGGCTGGACTACACAATGCCAGTAAGGCATTTCTGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTATGCAGAGTTGCCCTaGACAGAGATGTATCCATTC +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFYAELP*TEMYPF
Trigger: GAATGGATACATCTCTGTCCAGGGCAACTCTGCATA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTCCCTGGACTGTGTTaGTACAGATGGCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGVPGLC*YRWHFC
Trigger: ACAAAAATGCCATCTGTACCAACACAGTCCAGGGAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTCAACATTTGGATTCTaGCAATCACAAGCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGSTFGF*QSQAVR
Trigger: GCGGACAGCTTGTGATTGCCAGAATCCAAATGTTGA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
3UTR CAA 72 bp ACTGAGCCACACGCACAGCCTCCAGACCAATGCAATTaGATCATGTTTATTCCTTCTCTCCCAACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: TEPHAQPPDQCN*IMFIPSLPTLL
Trigger: TAGCAGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCAGTCTGGGGAACAGTTaGGTGGGGGACAGGACATCC +
Preference number: 4 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVSLGNS*VGDRTS
Trigger: GGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACT...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGAGGGCAAGCTTCTGTaGTTTTTACCAAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSEGKLL*FLPRLH
Trigger: GTGGAGTCTTGGTAAAAATCACAGAAGCTTGCCCTC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTTCATTCCAACAAGTGTaGGTTCTTAAGGCACATTCA +
Preference number: 4 (lower is better)
Translates to: AEIWLLFPAPMWQLTNICSFQQV*VLKAHS
Trigger: TGAATGTGCCTTAAGAACTCACACTTGTTGGAATGA...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTATCCTCCTGCTAAGTTaGTGCAGGCAGAGTCATTCC +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLILLLS*CRQSHS
Trigger: GGAATGACTCTGCCTGCATCAACTTAGCAGGAGGAT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCTTCTCTTGGGCCACTaGTCTCCAGTTCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSLLLGH*SPVQNS
Trigger: GCTATTTTGAACTGGAGAGCAGTGGCCCAAGAGAAG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGCTCATAAATCCTATTaGAGTCGACATGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFAHKSY*SRHGVG
Trigger: TCCTACTCCATGTCGACTGCAATAGGATTTATGAGC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCACCACTTTTGCATGTaGAGTTCCTGCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSHHFCM*SSCSCH
Trigger: GTGACAACTGCAGGAACTGCACATGCAAAAGTGGTG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACAGTAGTGCATCTTTaGTGCACACTCATCGATATC +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFTVVHL*CTLIDI
Trigger: GATATCGATGAGTGTGCAGCAAAGATGCACTACTGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGGATGTATCCTGGGATaGAGTCACAGCGATATAACC +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSGCILG*SHSDIT
Trigger: GGTTATATCGCTGTGACTGCATCCCAGGATACATCC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACCCTCTTCACAGAATaGTTTGCAGACAGTACCATT +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFTLFTE*FADSTI
Trigger: AATGGTACTGTCTGCAAAGCATTCTGTGAAGAGGGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTTGGTTAAAATCCGCTaGCCCTCAGCAAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGLVKIR*PSARTF
Trigger: AAAAGTTCTTGCTGAGGGCCAGCGGATTTTAACCAA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTGTACAGCTGTGTCCCTaGACTGTGTTGGTACAGATG +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLVQLCP*TVLVQM
Trigger: CATCTGTACCAACACAGTCCAGGGACACAGCTGTAC...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAAGACATCGGCACTGCTaGCAGCTGTGGGTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LFVFMMLGMEARVVHILPRHRHC*QLWVQL
Trigger: CAACTGGACCCACAGCTGCCAGCAGTGCCGATGTCT...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTCTCTCTGTACATCTTaGAACAGAAATGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGSLCTS*NRNALL
Trigger: CAGTAAGGCATTTCTGTTTCAAGATGTACAGAGAGA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTGGACTCCCCGGACAGTaGATAGGTCCCATCGTCATG +
Preference number: 4 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVGLPGQ*IGPIVM
Trigger: CATGACGATGGGACCTATTCACTGTCCGGGGAGTCC...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTCATTCCAACAAGTGTaGGTTCTTAAGGCACATTCA +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFSFQQV*VLKAHS
Trigger: TGAATGTGCCTTAAGAACTCACACTTGTTGGAATGA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACCAAGTCTCGTCTCTaGATAATTCAGTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFTKSRL*IIQFCS
Trigger: ACTGCAAAACTGAATTATGCAGAGACGAGACTTGGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTCATTGGCCAGAAATATaGACAGGAAGTGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TASRPMQFDHVYSFSPNSHWPEI*TGSESG
Trigger: CCCAGACTCACTTCCTGTGCATATTTCTGGCCAATG...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCATTGTATTCCAATTTTTaGATTCCGAGTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QSVSKSASREQLTWEQSPLYSNF*IPSFLH
Trigger: GTGGAGAAAACTCGGAATGCAAAAATTGGAATACAA...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACACAGAAATGCCTTACTaGCATTGTGTAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WASVFNSLKQKDAVDRCYTEMPY*HCVVQP
Trigger: TGGCTGGACTACACAATGCCAGTAAGGCATTTCTGT...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTTTTGCAGTCATCTTaGCCAAAAGCTCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGVLQSS*PKALAN
Trigger: ATTTGCAAGAGCTTTTGGCCAAGATGACTGCAAAAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACTATGCAGAGTTGCCCTaGACAGAGATGTATCCATTC +
Preference number: 4 (lower is better)
Translates to: WASVFNSLKQKDAVDRCYYAELP*TEMYPF
Trigger: GAATGGATACATCTCTGTCCAGGGCAACTCTGCATA...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTATATCTTTCTCACAGTaGCTTCCTGTGAATCCAGAA +
Preference number: 4 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFISFSQ*LPVNPE
Trigger: TTCTGGATTCACAGGAAGCCACTGTGAGAAAGATAT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTAAAAAGCCATGCTTTTaGTTACGTTGCCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSKKPCF*LRCPSH
Trigger: ATGGCTTGGGCAACGTAATCAAAAGCATGGCTTTTT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR TCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTTTCTCCGGAAGAATATaGTCCTTCTCTGAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLFSGRI*SFSEQF
Trigger: GAACTGCTCAGAGAAGGATCATATTCTTCCGGAGAA...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTGCATAATTCAGTTTTaGAGTCATCTTGGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGCIIQF*SHLGQK
Trigger: CTTTTGGCCAAGATGACTGCAAAACTGAATTATGCA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCTTCACAGAATGCTTTaGAGACAGTACCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSLHRML*RQYHFP
Trigger: TGGGAAATGGTACTGTCTGCAAAGCATTCTGTGAAG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTCAACGAATCCCTCTaGACATTCATCAATATCTTT +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGLNESL*TFINIF
Trigger: AAAGATATTGATGAATGTGCAGAGGGATTCGTTGAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTTTATTCCGGAATAGCTaGATCAGCTTCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSLFRNS*ISFSLT
Trigger: TGTGAGTGAGAAGCTGATCCAGCTATTCCGGAATAA...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCAAACTTTACAACATTaGCCAGAAATATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGQTLQH*PEICTG
Trigger: TCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACTTGGTTAAAATCCGCTaGCCCTCAGCAAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: WASVFNSLKQKDAVDRCYLVKIR*PSARTF
Trigger: AAAAGTTCTTGCTGAGGGCCAGCGGATTTTAACCAA...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTGTCCCTGGACTGTGTTaGTACAGATGGCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLVPGLC*YRWHFC
Trigger: ACAAAAATGCCATCTGTACCAACACAGTCCAGGGAC...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTACAGTGGTACCACCCTaGAAGGTTAACGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVTVVPP*KVNAAG
Trigger: TCCCGCTGCGTTAACCTTCCAGGGTGGTACCACTGT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTAGCTTCTCACTCACATaGGGGGCTGAGTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVSFSLT*GAEWIS
Trigger: AGAGATCCACTCAGCCCCTCATGTGAGTGAGAAGCT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR TCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTAAAAAGCCATGCTTTTaGTTACGTTGCCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLKKPCF*LRCPSH
Trigger: ATGGCTTGGGCAACGTAATCAAAAGCATGGCTTTTT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGATACATTTTGGTCTaGAAACTTTACAACATTGGC +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGRYILV*KLYNIG
Trigger: GCCAATGTTGTAAAGTTTGCAGACCAAAATGTATCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR GCA 90 bp ATTGTGATTCATCACATAGAGTCGGTTTCATGTAGAGCACTCCATTTTCCCAAAAGGTACCTCCGTATCTaGAACCCTCTTCACAGAATG +
Preference number: 4 (lower is better)
Translates to: IVIHHIESVSCRALHFPKRYLRI*NPLHRM
Trigger: CATTCTGTGAAGAGGGTTGCAGATACGGAGGTACCT...TTTGGGAAAATGGAGTGCTCTACATGAAACCGACTCTATGTGATGAATCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTCTCAGAATCCACACCTaGCCATTATGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVLRIHT*PLCFSP
Trigger: GGGGCTGAAGCATAATGGGCAGGTGTGGATTCTGAG...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTATGATCTTGCCATCTTaGATGATTCCTTTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGMILPS*MIPLKK
Trigger: CTTTTTCAAAGGAATCATCCAAGATGGCAAGATCAT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGTTTTGCAGTCATCTTaGCCAAAAGCTCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSVLQSS*PKALAN
Trigger: ATTTGCAAGAGCTTTTGGCCAAGATGACTGCAAAAC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTATTCCCGGCAGGTCTTaGTTAAAATCCGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVIPGRS*LKSAGP
Trigger: AGGGCCAGCGGATTTTAACCAAGACCTGCCGGGAAT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTACCAAGTCTCGTCTCTaGATAATTCAGTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLTKSRL*IIQFCS
Trigger: ACTGCAAAACTGAATTATGCAGAGACGAGACTTGGT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGGATGTATCCTGGGATaGAGTCACAGCGATATAACC +
Preference number: 4 (lower is better)
Translates to: LFVFMMLGMEARVVHILPGCILG*SHSDIT
Trigger: GGTTATATCGCTGTGACTGCATCCCAGGATACATCC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACCAAACTTTACAACATTaGCCAGAAATATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: WASVFNSLKQKDAVDRCYQTLQH*PEICTG
Trigger: TCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTG...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTTTGTATTCCAATTTTTaGATTCCGAGTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSLYSNF*IPSFLH
Trigger: GTGGAGAAAACTCGGAATGCAAAAATTGGAATACAA...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CCA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCTCAACATTTGGATTCTaGCAATCACAAGCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVSTFGF*QSQAVR
Trigger: GCGGACAGCTTGTGATTGCCAGAATCCAAATGTTGA...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CAA 72 bp CAGAGTGGTAGCATGGCACTGACTTTAGTGACTGTATaGTACCTATTTGTTTTTATGATGTTGGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: QSGSMALTLVTV*YLFVFMMLGME
Trigger: TTCCATCCCCAACATCATAAAAACAAATAGGTACAATACAGTCACTAAAGTCAGTGCCATGCTACCACTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTAGATACATTTTGGTCTaGAAACTTTACAACATTGGC +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLRYILV*KLYNIG
Trigger: GCCAATGTTGTAAAGTTTGCAGACCAAAATGTATCT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTGATATCTTCACAGTATaGAGAGTTGCCCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVDIFTV*RVALDR
Trigger: TCTGTCCAGGGCAACTCTGCATACTGTGAAGATATC...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCACAGTAGTGCATCTTTaGTGCACACTCATCGATATC +
Preference number: 4 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVTVVHL*CTLIDI
Trigger: GATATCGATGAGTGTGCAGCAAAGATGCACTACTGT...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATTATTCCGGAATAGCTaGATCAGCTTCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: LFVFMMLGMEARVVHILPLFRNS*ISFSLT
Trigger: TGTGAGTGAGAAGCTGATCCAGCTATTCCGGAATAA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTATGATCTTGCCATCTTaGATGATTCCTTTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: ALFGAGKLSHLLRAFAVLMILPS*MIPLKK
Trigger: CTTTTTCAAAGGAATCATCCAAGATGGCAAGATCAT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp ATTGTGATTCATCACATAGAGTCGGTTTCATGTAGAGCACTCCATTTTCCCAAATGCATAATTCAGTTTTaGAGTCATCTTGGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: IVIHHIESVSCRALHFPKCIIQF*SHLGQK
Trigger: CTTTTGGCCAAGATGACTGCAAAACTGAATTATGCA...TTTGGGAAAATGGAGTGCTCTACATGAAACCGACTCTATGTGATGAATCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR GCA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTACCCTCTTCACAGAATaGTTTGCAGACAGTACCATT +
Preference number: 4 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVTLFTE*FADSTI
Trigger: AATGGTACTGTCTGCAAAGCATTCTGTGAAGAGGGT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CCA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAATATCTTTCTCACAGTaGCTTCCTGTGAATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LFVFMMLGMEARVVHILPISFSQ*LPVNPE
Trigger: TTCTGGATTCACAGGAAGCCACTGTGAGAAAGATAT...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
3UTR CAA 72 bp CCTAAGAAGATCGAGTCATCAAATGTTACTCTTAACTaGTCATTAAGTAGCTACCATTTTTCTCTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PKKIESSNVTLN*SLSSYHFSLAN
Trigger: GTTTGCAAGAGAAAAATGGTAGCTACTTAATGACAAGTTAAGAGTAACATTTGATGACTCGATCTTCTTAGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS GCA 90 bp AGGCGCTCACAGACAGCGCGACCTTGTGCCACTGTCCATCGGCCATaGGGTAGGGAAGGGCCTCAGTCCTGGGCTTGCCGCCATGGATGT +
Preference number: 5 (lower is better)
Translates to: RRSQTARPCATVHRP*GREGPQSWACRHGC
Trigger: ACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGTGGCACAAGGTCGCGCTGTCTGTGAGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS GCA 90 bp ACTGTCCATCGGCCATGCGGTAGGGAAGGGCCTCAGTCCTGGGCTTaGCGCCATGGATGTAATGATAGCGTATCTCTTCTCTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: TVHRPCGREGPQSWA*RHGCNDSVSLLLGH
Trigger: GTGGCCCAAGAGAAGAGATACGCTATCATTACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CCA 90 bp TGTGCCACTGTCCATCGGCCATGCGGTAGGGAAGGGCCTCAGTCCTaGGCTTGCCGCCATGGATGTAATGATAGCGTATCTCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: CATVHRPCGREGPQS*ACRHGCNDSVSLLL
Trigger: CAAGAGAAGAGATACGCTATCATTACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGTGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS-3UTR CAA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAATCTACCCAGGAGTCTaGGTCCCTGTAGAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: QSVSKSASREQLTWEQSPIYPGV*VPVEQP
Trigger: GGGCTGCTCTACAGGGACCAAGACTCCTGGGTAGAT...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS GCA 90 bp CTTGCATTGACAGGTTGTACAGGGAGATCCAGCCATTGTCCACACTaGGCCGCTCAGCCTCGAAATACCAGAGCTGTCCAGGCAAGTTTT +
Preference number: 5 (lower is better)
Translates to: LALTGCTGRSSHCPH*AAQPRNTRAVQASF
Trigger: AAAACTTGCCTGGACAGCTCTGGTATTTCGAGGCTGAGCGGCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS TCA 90 bp AACATTGGCCAGAAATATGCACAGGAAGTGAGTCTGGGGAACAGTTaGGTGGGGGACAGGACATCCTTCGGCACTCCACAGCACCACTTT +
Preference number: 5 (lower is better)
Translates to: NIGQKYAQEVSLGNS*VGDRTSFGTPQHHF
Trigger: AAAGTGGTGCTGTGGAGTGCCGAAGGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTGGCCAATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS TCA 90 bp GGATGTATCCTGGGATGCAGTCACAGCGATATAACCCCGGCAAGTTaGCACACACCGTGTTGGCATGACAGTAGTGCATCTTTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: GCILGCSHSDITPAS*HTPCWHDSSASLLH
Trigger: GTGCAGCAAAGATGCACTACTGTCATGCCAACACGGTGTGTGTCAACTTGCCGGGGTTATATCGCTGTGACTGCATCCCAGGATACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS GCA 90 bp AGCTCCCGGATCGACAGTATCACCCCTGAGGTGGACGGCTTCTGCTaGACTGTAGCCAAAAAGGTAAACTCACTCTTATTCCGGAATAGC +
Preference number: 5 (lower is better)
Translates to: SSRIDSITPEVDGFC*TVAKKVNSLLFRNS
Trigger: GCTATTCCGGAATAAGAGTGAGTTTACCTTTTTGGCTACAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCGATCCGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS GCA 90 bp TCCAGCTCCCGGATCGACAGTATCACCCCTGAGGTGGACGGCTTCTaGTGCACTGTAGCCAAAAAGGTAAACTCACTCTTATTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: SSSRIDSITPEVDGF*CTVAKKVNSLLFRN
Trigger: ATTCCGGAATAAGAGTGAGTTTACCTTTTTGGCTACAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCGATCCGGGAGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTATCTACCCAGGAGTCTaGGTCCCTGTAGAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGIYPGV*VPVEQP
Trigger: GGGCTGCTCTACAGGGACCAAGACTCCTGGGTAGAT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGAGTCTGGGGAACAGTaGAGTGGGGGACAGGACATC +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGESGEQ*SGGQDI
Trigger: GATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCATTCCCGGCAGGTCTaGGTTAAAATCCGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFHSRQV*VKIRWP
Trigger: GGGCCAGCGGATTTTAACCAAGACCTGCCGGGAATG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS TCA 90 bp TGGTCTGCAAACTTTACAACATTGGCCAGAAATATGCACAGGAAGTaGGTCTGGGGAACAGTTGAGTGGGGGACAGGACATCCTTCGGCA +
Preference number: 5 (lower is better)
Translates to: WSANFTTLARNMHRK*VWGTVEWGTGHPSA
Trigger: TGCCGAAGGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTGCAGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTGCCCAAGCCATAGATaGCTTCCTGGAGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGCPSHR*LPGGRL
Trigger: CAACCTTCCTCCAGGAAGCAATCTATGGCTTGGGCA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGAGCAGCCCACTCACTaGGCAGGTCTTCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSEQPTH*AGLLTV
Trigger: CACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAGCATTTTTGTCACAGTaGTGTTGTCCGCTGCCACAA +
Preference number: 5 (lower is better)
Translates to: QSVSKSASREQLTWEQSPAFLSQ*CCPLPQ
Trigger: TTGTGGCAGCGGACAACACAACTGTGACAAAAATGC...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCATGTCCCTGGACTGTGTaGGTACAGATGGCATTTTTG +
Preference number: 5 (lower is better)
Translates to: QSVSKSASREQLTWEQSPCPWTV*VQMAFL
Trigger: CAAAAATGCCATCTGTACCAACACAGTCCAGGGACA...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTACGCAGCGGGAGTGGTaGTGGCACTCAACGAATCCC +
Preference number: 5 (lower is better)
Translates to: TASRPMQFDHVYSFSPNSTQREW*WHSTNP
Trigger: GGGATTCGTTGAGTGCCACAACCACTCCCGCTGCGT...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS TCA 90 bp GAATATGATCCTTCTCTGAGCAGTTCAAAGGAGGGCAAGCTTCTGTaGTTTTTACCAAGACTCCACCTCGACATTCCCGGCAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: EYDPSLSSSKEGKLL*FLPRLHLDIPGRSW
Trigger: CCAAGACCTGCCGGGAATGTCGAGGTGGAGTCTTGGTAAAAATCACAGAAGCTTGCCCTCCTTTGAACTGCTCAGAGAAGGATCATATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 90 bp CAAGTTGACACACACCGTGTTGGCATGACAGTAGTGCATCTTTGCTaGACACTCATCGATATCTTCACAGTATGCAGAGTTGCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: QVDTHRVGMTVVHLC*TLIDIFTVCRVALD
Trigger: GTCCAGGGCAACTCTGCATACTGTGAAGATATCGATGAGTGTGCAGCAAAGATGCACTACTGTCATGCCAACACGGTGTGTGTCAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTGGCAATTTTCCAGTaGACCAAGTCTCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGVAIFQ*TKSRLC
Trigger: GCAGAGACGAGACTTGGTCAACTGGAAAATTGCCAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGTGCAGTTCCTGCAGTaGTCACCATCTACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSVQFLQ*SPSTQE
Trigger: CTCCTGGGTAGATGGTGACAACTGCAGGAACTGCAC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAGTACAGATGGCATTTTaGTCACAGTTGTGTTGTCCG +
Preference number: 5 (lower is better)
Translates to: QSVSKSASREQLTWEQSPVQMAF*SQLCCP
Trigger: CGGACAACACAACTGTGACAAAAATGCCATCTGTAC...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGAAGGACAGACACATTaGTTAGGGGCCACACAGGTA +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGEGQTH*LGATQV
Trigger: TACCTGTGTGGCCCCTAACAAATGTGTCTGTCCTTC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGAAGGACAGACACATTaGTTAGGGGCCACACAGGTA +
Preference number: 5 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFEGQTH*LGATQV
Trigger: TACCTGTGTGGCCCCTAACAAATGTGTCTGTCCTTC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTCTTGCATTGACAGGTaGTACAGGGAGATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFSCIDR*YREIQP
Trigger: TGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 90 bp ATTCCAATTTTTGCATTCCGAGTTTTCTCCACACTTAGGTGCTTCTaGACAGAAGTTATGACCTCGGCAGACCCTGCAGCACTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: IPIFAFRVFSTLRCF*TEVMTSADPAALVL
Trigger: GAGAACCAGTGCTGCAGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAACTCGGAATGCAAAAATTGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTGTGCAGTTCCTGCAGTaGTCACCATCTACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TASRPMQFDHVYSFSPNSVQFLQ*SPSTQE
Trigger: CTCCTGGGTAGATGGTGACAACTGCAGGAACTGCAC...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTTTGTCACAGTTGTGTaGTCCGCTGCCACAATCATC +
Preference number: 5 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFFVTVV*SAATII
Trigger: GATGATTGTGGCAGCGGACAACACAACTGTGACAAA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGCATTTTTGTCACAGTaGTGTTGTCCGCTGCCACAA +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGAFLSQ*CCPLPQ
Trigger: TTGTGGCAGCGGACAACACAACTGTGACAAAAATGC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTGTCCCTGGACTGTGTaGGTACAGATGGCATTTTTG +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGCPWTV*VQMAFL
Trigger: CAAAAATGCCATCTGTACCAACACAGTCCAGGGACA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTCTCCCATTCTTGCATaGACAGGTTGTACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFSPILA*TGCTGR
Trigger: TCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CCA 90 bp TTTGATTACGTTGCCCAAGCCATAGATTGCTTCCTGGAGGAAGGTTaGTCTCCGGAGGATCTATCACACGCTCATAAATCCTATTGCAGT +
Preference number: 5 (lower is better)
Translates to: FDYVAQAIDCFLEEG*SPEDLSHAHKSYCS
Trigger: ACTGCAATAGGATTTATGAGCGTGTGATAGATCCTCCGGAGACCAACCTTCCTCCAGGAAGCAATCTATGGCTTGGGCAACGTAATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS-3UTR CAA 90 bp GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTGAGATGTATCCATTCTaGCACTCACAAGTCGCTTTT +
Preference number: 5 (lower is better)
Translates to: AEIWLLFPAPMWQLTNICEMYPF*HSQVAF
Trigger: AAAAGCGACTTGTGAGTGCAAGAATGGATACATCTC...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGACAGTAGTGCATCTTaGCTGCACACTCATCGATAT +
Preference number: 5 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFDSSAS*LHTHRY
Trigger: ATATCGATGAGTGTGCAGCAAAGATGCACTACTGTC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTACAGATGGCATTTTaGTCACAGTTGTGTTGTCCG +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGVQMAF*SQLCCP
Trigger: CGGACAACACAACTGTGACAAAAATGCCATCTGTAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTTGGCCAAAAGCTCTaGCAAATCCATTATTCCTTG +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGLGQKL*QIHYSL
Trigger: CAAGGAATAATGGATTTGCAAGAGCTTTTGGCCAAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGTTTTGCAGTCATCTaGGCCAAAAGCTCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGSFAVI*AKSSCK
Trigger: TTTGCAAGAGCTTTTGGCCAAGATGACTGCAAAACT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCGAGCAGCCCACTCACTaGGCAGGTCTTCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVEQPTH*AGLLTV
Trigger: CACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTC...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGAGTCTGGGGAACAGTaGAGTGGGGGACAGGACATC +
Preference number: 5 (lower is better)
Translates to: LFVFMMLGMEARVVHILPESGEQ*SGGQDI
Trigger: GATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCACATTCCCGGCAGGTCTaGGTTAAAATCCGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LFVFMMLGMEARVVHILPHSRQV*VKIRWP
Trigger: GGGCCAGCGGATTTTAACCAAGACCTGCCGGGAATG...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS TCA 90 bp TTTGCAGTCATCTTGGCCAAAAGCTCTTGCAAATCCATTATTCCTTaGACCAGGCTCAGGAAATCACTGCATGTTGGGCAAGTGCGATTT +
Preference number: 5 (lower is better)
Translates to: FAVILAKSSCKSIIP*TRLRKSLHVGQVRF
Trigger: AAATCGCACTTGCCCAACATGCAGTGATTTCCTGAGCCTGGTTCAAGGAATAATGGATTTGCAAGAGCTTTTGGCCAAGATGACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTCTCTCTGTACATCTaGAAACAGAAATGCCTTACT +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGLSLYI*KQKCLT
Trigger: AGTAAGGCATTTCTGTTTCAAGATGTACAGAGAGAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ATTGTGATTCATCACATAGAGTCGGTTTCATGTAGAGCACTCCATTTTCCCAAATGCCCAAGCCATAGATaGCTTCCTGGAGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: IVIHHIESVSCRALHFPKCPSHR*LPGGRL
Trigger: CAACCTTCCTCCAGGAAGCAATCTATGGCTTGGGCA...TTTGGGAAAATGGAGTGCTCTACATGAAACCGACTCTATGTGATGAATCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTGCATAATTCAGTTTaGCAGTCATCTTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGLHNSV*QSSWPK
Trigger: TTTTGGCCAAGATGACTGCAAAACTGAATTATGCAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGACAGTAGTGCATCTTaGCTGCACACTCATCGATAT +
Preference number: 5 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSDSSAS*LHTHRY
Trigger: ATATCGATGAGTGTGCAGCAAAGATGCACTACTGTC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 90 bp GCTGGCCCTCAGCAAGAACTTTTCCTCCATAGATACATTTTGGTCTaGAAACTTTACAACATTGGCCAGAAATATGCACAGGAAGTGAGT +
Preference number: 5 (lower is better)
Translates to: AGPQQELFLHRYILV*KLYNIGQKYAQEVS
Trigger: ACTCACTTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTGCAGACCAAAATGTATCTATGGAGGAAAAGTTCTTGCTGAGGGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 90 bp CTTCACAGTATGCAGAGTTGCCCTGGACAGAGATGTATCCATTCTTaGACTCACAAGTCGCTTTTGTATTCCAATTTTTGCATTCCGAGT +
Preference number: 5 (lower is better)
Translates to: LHSMQSCPGQRCIHS*THKSLLYSNFCIPS
Trigger: ACTCGGAATGCAAAAATTGGAATACAAAAGCGACTTGTGAGTGCAAGAATGGATACATCTCTGTCCAGGGCAACTCTGCATACTGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGATGATCTTGCCATCTaGGATGATTCCTTTGAAAAA +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGDDLAI*DDSFEK
Trigger: TTTTTCAAAGGAATCATCCAAGATGGCAAGATCATC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTCCATAGATACATTTaGGTCTGCAAACTTTACAAC +
Preference number: 5 (lower is better)
Translates to: RMSKVVKATQTPSSDGDFLHRYI*VCKLYN
Trigger: GTTGTAAAGTTTGCAGACCAAAATGTATCTATGGAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTCCATAGATACATTTaGGTCTGCAAACTTTACAAC +
Preference number: 5 (lower is better)
Translates to: MSKVVKATQTPSSDGDFGLHRYI*VCKLYN
Trigger: GTTGTAAAGTTTGCAGACCAAAATGTATCTATGGAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGAGATGTATCCATTCTaGCACTCACAAGTCGCTTTT +
Preference number: 5 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSEMYPF*HSQVAF
Trigger: AAAAGCGACTTGTGAGTGCAAGAATGGATACATCTC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACCTGCATAATTCAGTTTaGCAGTCATCTTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: WASVFNSLKQKDAVDRCYLHNSV*QSSWPK
Trigger: TTTTGGCCAAGATGACTGCAAAACTGAATTATGCAG...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTAGAAAAGGTCAACATTaGGATTCTGGCAATCACAAG +
Preference number: 5 (lower is better)
Translates to: PPLPQVGWSFCPFSHVMSRKGQH*DSGNHK
Trigger: CTTGTGATTGCCAGAATCCAAATGTTGACCTTTTCT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS-3UTR CAA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATCTTGCATTGACAGGTaGTACAGGGAGATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LFVFMMLGMEARVVHILPSCIDR*YREIQP
Trigger: TGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTCTCTCTCTGTACATCTaGAAACAGAAATGCCTTACT +
Preference number: 5 (lower is better)
Translates to: TASRPMQFDHVYSFSPNSLSLYI*KQKCLT
Trigger: AGTAAGGCATTTCTGTTTCAAGATGTACAGAGAGAG...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTGTGGCAATTTTCCAGTaGACCAAGTCTCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVVAIFQ*TKSRLC
Trigger: GCAGAGACGAGACTTGGTCAACTGGAAAATTGCCAC...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATTTGTCACAGTTGTGTaGTCCGCTGCCACAATCATC +
Preference number: 5 (lower is better)
Translates to: LFVFMMLGMEARVVHILPFVTVV*SAATII
Trigger: GATGATTGTGGCAGCGGACAACACAACTGTGACAAA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATCTCCCATTCTTGCATaGACAGGTTGTACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: LFVFMMLGMEARVVHILPSPILA*TGCTGR
Trigger: TCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCGAAAAAGCCATGCTTTaGATTACGTTGCCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: HFNTFHSKPTGQTQHSEVEKAML*ITLPKP
Trigger: TGGCTTGGGCAACGTAATCAAAAGCATGGCTTTTTC...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCACTTGGCCAAAAGCTCTaGCAAATCCATTATTCCTTG +
Preference number: 5 (lower is better)
Translates to: LFVFMMLGMEARVVHILPLGQKL*QIHYSL
Trigger: CAAGGAATAATGGATTTGCAAGAGCTTTTGGCCAAG...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTAGTTTTGCAGTCATCTaGGCCAAAAGCTCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVSFAVI*AKSSCK
Trigger: TTTGCAAGAGCTTTTGGCCAAGATGACTGCAAAACT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGATGATCTTGCCATCTaGGATGATTCCTTTGAAAAA +
Preference number: 5 (lower is better)
Translates to: LFVFMMLGMEARVVHILPDDLAI*DDSFEK
Trigger: TTTTTCAAAGGAATCATCCAAGATGGCAAGATCATC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS-3UTR CAA 90 bp GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTAGAAAAGGTCAACATTaGGATTCTGGCAATCACAAG +
Preference number: 5 (lower is better)
Translates to: AVIYHIASGFAKCYIQFVRKGQH*DSGNHK
Trigger: CTTGTGATTGCCAGAATCCAAATGTTGACCTTTTCT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS GCA 72 bp CAGACAGCGCGACCTTGTGCCACTGTCCATCGGCCATaGGGTAGGGAAGGGCCTCAGTCCTGGGCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: QTARPCATVHRP*GREGPQSWACR
Trigger: GCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGTGGCACAAGGTCGCGCTGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS GCA 72 bp GGCCAGCAGTCTGCCTCTCCTTCCAGACATCGGCACTaGTGGCAGCTGTGGGTCCAGTTGTCTCCACTTCGA +
Preference number: 6 (lower is better)
Translates to: GQQSASPSRHRH*WQLWVQLSPLR
Trigger: TCGAAGTGGAGACAACTGGACCCACAGCTGCCAGCAGTGCCGATGTCTGGAAGGAGAGGCAGACTGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 72 bp CGGCCATGCGGTAGGGAAGGGCCTCAGTCCTGGGCTTaGCGCCATGGATGTAATGATAGCGTATCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: RPCGREGPQSWA*RHGCNDSVSLL
Trigger: GAGAAGAGATACGCTATCATTACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CCA 72 bp GTCCATCGGCCATGCGGTAGGGAAGGGCCTCAGTCCTaGGCTTGCCGCCATGGATGTAATGATAGCGTATCT +
Preference number: 6 (lower is better)
Translates to: VHRPCGREGPQS*ACRHGCNDSVS
Trigger: AGATACGCTATCATTACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CAA 90 bp CCAGATCCACAGAGCAGCAGACTCTCCCATTCTTGCATTGACAGGTaGTACAGGGAGATCCAGCCATTGTCCACACTGCGCCGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: PDPQSSRLSHSCIDR*YREIQPLSTLRRSA
Trigger: GGCTGAGCGGCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCTGCTGCTCTGTGGATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 72 bp ACAGGTTGTACAGGGAGATCCAGCCATTGTCCACACTaGGCCGCTCAGCCTCGAAATACCAGAGCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: TGCTGRSSHCPH*AAQPRNTRAVQ
Trigger: CTGGACAGCTCTGGTATTTCGAGGCTGAGCGGCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CCA 72 bp CAGTGGTACCACCCTGGAAGGTTAACGCAGCGGGAGTaGTTGTGGCACTCAACGAATCCCTCTGCACATTCA +
Preference number: 6 (lower is better)
Translates to: QWYHPGRLTQRE*LWHSTNPSAHS
Trigger: TGAATGTGCAGAGGGATTCGTTGAGTGCCACAACCACTCCCGCTGCGTTAACCTTCCAGGGTGGTACCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS CAA 90 bp CTCTCCCATTCTTGCATTGACAGGTTGTACAGGGAGATCCAGCCATaGTCCACACTGCGCCGCTCAGCCTCGAAATACCAGAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: LSHSCIDRLYREIQP*STLRRSASKYQSCP
Trigger: TGGACAGCTCTGGTATTTCGAGGCTGAGCGGCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS TCA 72 bp CAGAAATATGCACAGGAAGTGAGTCTGGGGAACAGTTaGGTGGGGGACAGGACATCCTTCGGCACTCCACAG +
Preference number: 6 (lower is better)
Translates to: QKYAQEVSLGNS*VGDRTSFGTPQ
Trigger: CTGTGGAGTGCCGAAGGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS TCA 72 bp CGGCAGACCCTGCAGCACTGGTTCTCCGGAAGAATATaGTCCTTCTCTGAGCAGTTCAAAGGAGGGCAAGCT +
Preference number: 6 (lower is better)
Translates to: RQTLQHWFSGRI*SFSEQFKGGQA
Trigger: AGCTTGCCCTCCTTTGAACTGCTCAGAGAAGGATCATATTCTTCCGGAGAACCAGTGCTGCAGGGTCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CAA 72 bp CCAGGAGTCTTGGTCCCTGTAGAGCAGCCCACTCACTaGGCAGGTCTTCTCACAGTGGCAATTTTCCAGTTG +
Preference number: 6 (lower is better)
Translates to: PGVLVPVEQPTH*AGLLTVAIFQL
Trigger: CAACTGGAAAATTGCCACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTCTACAGGGACCAAGACTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CAA 72 bp TGGTACCACCCTGGAAGGTTAACGCAGCGGGAGTGGTaGTGGCACTCAACGAATCCCTCTGCACATTCATCA +
Preference number: 6 (lower is better)
Translates to: WYHPGRLTQREW*WHSTNPSAHSS
Trigger: TGATGAATGTGCAGAGGGATTCGTTGAGTGCCACAACCACTCCCGCTGCGTTAACCTTCCAGGGTGGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS CAA 72 bp CAGAGCAGCAGACTCTCCCATTCTTGCATTGACAGGTaGTACAGGGAGATCCAGCCATTGTCCACACTGCGC +
Preference number: 6 (lower is better)
Translates to: QSSRLSHSCIDR*YREIQPLSTLR
Trigger: GCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCTGCTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CAA 90 bp TTTGCATGTGCAGTTCCTGCAGTTGTCACCATCTACCCAGGAGTCTaGGTCCCTGTAGAGCAGCCCACTCACTTGGCAGGTCTTCTCACA +
Preference number: 6 (lower is better)
Translates to: FACAVPAVVTIYPGV*VPVEQPTHLAGLLT
Trigger: TGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTCTACAGGGACCAAGACTCCTGGGTAGATGGTGACAACTGCAGGAACTGCACATGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS TCA 72 bp AGAAATGCCTTACTGGCATTGTGTAGTCCAGCCACCTaGGTGACGCCCAGGGTGGTGTTCACAAGGTCAAGT +
Preference number: 6 (lower is better)
Translates to: RNALLALCSPAT*VTPRVVFTRSS
Trigger: ACTTGACCTTGTGAACACCACCCTGGGCGTCACTCAGGTGGCTGGACTACACAATGCCAGTAAGGCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS TCA 72 bp TTTTCTCCACACTTAGGTGCTTCTGCACAGAAGTTATaGCCTCGGCAGACCCTGCAGCACTGGTTCTCCGGA +
Preference number: 6 (lower is better)
Translates to: FSPHLGASAQKL*PRQTLQHWFSG
Trigger: TCCGGAGAACCAGTGCTGCAGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS TCA 72 bp CTGGGATGCAGTCACAGCGATATAACCCCGGCAAGTTaGCACACACCGTGTTGGCATGACAGTAGTGCATCT +
Preference number: 6 (lower is better)
Translates to: LGCSHSDITPAS*HTPCWHDSSAS
Trigger: AGATGCACTACTGTCATGCCAACACGGTGTGTGTCAACTTGCCGGGGTTATATCGCTGTGACTGCATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CAA 90 bp ACCATCTACCCAGGAGTCTTGGTCCCTGTAGAGCAGCCCACTCACTaGGCAGGTCTTCTCACAGTGGCAATTTTCCAGTTGACCAAGTCT +
Preference number: 6 (lower is better)
Translates to: TIYPGVLVPVEQPTH*AGLLTVAIFQLTKS
Trigger: AGACTTGGTCAACTGGAAAATTGCCACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTCTACAGGGACCAAGACTCCTGGGTAGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS TCA 72 bp GTGTTCACAAGGTCAAGTTCAGTGATGATGTCCATCTaGAGGTCAGGGTCCATCCCAAAGCCCAGCACTGTC +
Preference number: 6 (lower is better)
Translates to: VFTRSSSVMMSI*RSGSIPKPSTV
Trigger: GACAGTGCTGGGCTTTGGGATGGACCCTGACCTTCAGATGGACATCATCACTGAACTTGACCTTGTGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS GCA 72 bp GTGCTTCTGCACAGAAGTTATGACCTCGGCAGACCCTaGAGCACTGGTTCTCCGGAAGAATATGATCCTTCT +
Preference number: 6 (lower is better)
Translates to: VLLHRSYDLGRP*STGSPEEYDPS
Trigger: AGAAGGATCATATTCTTCCGGAGAACCAGTGCTGCAGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CCA 72 bp TTACCAAGACTCCACCTCGACATTCCCGGCAGGTCTTaGTTAAAATCCGCTGGCCCTCAGCAAGAACTTTTC +
Preference number: 6 (lower is better)
Translates to: LPRLHLDIPGRS*LKSAGPQQELF
Trigger: GAAAAGTTCTTGCTGAGGGCCAGCGGATTTTAACCAAGACCTGCCGGGAATGTCGAGGTGGAGTCTTGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CCA 72 bp TACCACCCTGGAAGGTTAACGCAGCGGGAGTGGTTGTaGCACTCAACGAATCCCTCTGCACATTCATCAATA +
Preference number: 6 (lower is better)
Translates to: YHPGRLTQREWL*HSTNPSAHSSI
Trigger: TATTGATGAATGTGCAGAGGGATTCGTTGAGTGCCACAACCACTCCCGCTGCGTTAACCTTCCAGGGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081872.13
CDS CAA 72 bp AGGAAATCACTGCATGTTGGGCAAGTGCGATTTAGGTaGGGGCACTGTGTGATGAAGCCGTTCGGCATGAAG +
Preference number: 6 (lower is better)
Translates to: RKSLHVGQVRFR*GHCVMKPFGMK
Trigger: CTTCATGCCGAACGGCTTCATCACACAGTGCCCCAACCTAAATCGCACTTGCCCAACATGCAGTGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CAA 72 bp CAGATCCACAGAGCAGCAGACTCTCCCATTCTTGCATaGACAGGTTGTACAGGGAGATCCAGCCATTGTCCA +
Preference number: 6 (lower is better)
Translates to: QIHRAADSPILA*TGCTGRSSHCP
Trigger: TGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCTGCTGCTCTGTGGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 72 bp TTTGCATTCCGAGTTTTCTCCACACTTAGGTGCTTCTaGACAGAAGTTATGACCTCGGCAGACCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: FAFRVFSTLRCF*TEVMTSADPAA
Trigger: TGCTGCAGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAACTCGGAATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CAA 72 bp TTTACCAAGACTCCACCTCGACATTCCCGGCAGGTCTaGGTTAAAATCCGCTGGCCCTCAGCAAGAACTTTT +
Preference number: 6 (lower is better)
Translates to: FTKTPPRHSRQV*VKIRWPSARTF
Trigger: AAAAGTTCTTGCTGAGGGCCAGCGGATTTTAACCAAGACCTGCCGGGAATGTCGAGGTGGAGTCTTGGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CAA 90 bp CTGTGTCCCTGGACTGTGTTGGTACAGATGGCATTTTTGTCACAGTaGTGTTGTCCGCTGCCACAATCATCATGCTCCGTACAAGAGAAG +
Preference number: 6 (lower is better)
Translates to: LCPWTVLVQMAFLSQ*CCPLPQSSCSVQEK
Trigger: CTTCTCTTGTACGGAGCATGATGATTGTGGCAGCGGACAACACAACTGTGACAAAAATGCCATCTGTACCAACACAGTCCAGGGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS GCA 72 bp ATCGACAGTATCACCCCTGAGGTGGACGGCTTCTGCTaGACTGTAGCCAAAAAGGTAAACTCACTCTTATTC +
Preference number: 6 (lower is better)
Translates to: IDSITPEVDGFC*TVAKKVNSLLF
Trigger: GAATAAGAGTGAGTTTACCTTTTTGGCTACAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CCA 72 bp GCCGCCATGGATGTAATGATAGCGTATCTCTTCTCTTaGGCCACTGCTCTCCAGTTCAAAATAGCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: AAMDVMIAYLFS*ATALQFKIAVF
Trigger: GAACACAGCTATTTTGAACTGGAGAGCAGTGGCCCAAGAGAAGAGATACGCTATCATTACATCCATGGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS TCA 72 bp AACTTTACAACATTGGCCAGAAATATGCACAGGAAGTaGGTCTGGGGAACAGTTGAGTGGGGGACAGGACAT +
Preference number: 6 (lower is better)
Translates to: NFTTLARNMHRK*VWGTVEWGTGH
Trigger: ATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 72 bp CCAATTTTTGCATTCCGAGTTTTCTCCACACTTAGGTaGTTCTGCACAGAAGTTATGACCTCGGCAGACCCT +
Preference number: 6 (lower is better)
Translates to: PIFAFRVFSTLR*FCTEVMTSADP
Trigger: AGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAACTCGGAATGCAAAAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 72 bp GACACACACCGTGTTGGCATGACAGTAGTGCATCTTTaGTGCACACTCATCGATATCTTCACAGTATGCAGA +
Preference number: 6 (lower is better)
Translates to: DTHRVGMTVVHL*CTLIDIFTVCR
Trigger: TCTGCATACTGTGAAGATATCGATGAGTGTGCAGCAAAGATGCACTACTGTCATGCCAACACGGTGTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CAA 72 bp TGCCGCCATGGATGTAATGATAGCGTATCTCTTCTCTaGGGCCACTGCTCTCCAGTTCAAAATAGCTGTGTT +
Preference number: 6 (lower is better)
Translates to: CRHGCNDSVSLL*GHCSPVQNSCV
Trigger: AACACAGCTATTTTGAACTGGAGAGCAGTGGCCCAAGAGAAGAGATACGCTATCATTACATCCATGGCGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CAA 72 bp GCTGCACACTCATCGATATCTTCACAGTATGCAGAGTaGCCCTGGACAGAGATGTATCCATTCTTGCACTCA +
Preference number: 6 (lower is better)
Translates to: AAHSSISSQYAE*PWTEMYPFLHS
Trigger: TGAGTGCAAGAATGGATACATCTCTGTCCAGGGCAACTCTGCATACTGTGAAGATATCGATGAGTGTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CAA 72 bp TGGACTGTGTTGGTACAGATGGCATTTTTGTCACAGTaGTGTTGTCCGCTGCCACAATCATCATGCTCCGTA +
Preference number: 6 (lower is better)
Translates to: WTVLVQMAFLSQ*CCPLPQSSCSV
Trigger: TACGGAGCATGATGATTGTGGCAGCGGACAACACAACTGTGACAAAAATGCCATCTGTACCAACACAGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS GCA 72 bp TTTGGTCTGCAAACTTTACAACATTGGCCAGAAATATaGACAGGAAGTGAGTCTGGGGAACAGTTGAGTGGG +
Preference number: 6 (lower is better)
Translates to: FGLQTLQHWPEI*TGSESGEQLSG
Trigger: CCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTGCAGACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS GCA 72 bp ACACACCGTGTTGGCATGACAGTAGTGCATCTTTGCTaGACACTCATCGATATCTTCACAGTATGCAGAGTT +
Preference number: 6 (lower is better)
Translates to: THRVGMTVVHLC*TLIDIFTVCRV
Trigger: AACTCTGCATACTGTGAAGATATCGATGAGTGTGCAGCAAAGATGCACTACTGTCATGCCAACACGGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS GCA 72 bp TACAGATGGCATTTTTGTCACAGTTGTGTTGTCCGCTaGCACAATCATCATGCTCCGTACAAGAGAAGTCAT +
Preference number: 6 (lower is better)
Translates to: YRWHFCHSCVVR*HNHHAPYKRSH
Trigger: ATGACTTCTCTTGTACGGAGCATGATGATTGTGGCAGCGGACAACACAACTGTGACAAAAATGCCATCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS GCA 72 bp TTTGCATTCCGAGTTTTCTCCACACTTAGGTGCTTCTaGACAGAAGTTATGACTTTTGCAGTCATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: FAFRVFSTLRCF*TEVMTFAVILA
Trigger: GGCCAAGATGACTGCAAAAGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAACTCGGAATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151721.8
CDS CAA 90 bp TCTTCACAGTATGCAGAGTTGCCCTGGACAGAGATGTATCCATTCTaGCACTCACAAGTCGCTTTTGTATTCCAATTTTTGCATTCCGAG +
Preference number: 6 (lower is better)
Translates to: SSQYAELPWTEMYPF*HSQVAFVFQFLHSE
Trigger: CTCGGAATGCAAAAATTGGAATACAAAAGCGACTTGTGAGTGCAAGAATGGATACATCTCTGTCCAGGGCAACTCTGCATACTGTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS TCA 72 bp CCATCTTGGATGATTCCTTTGAAAAAGCCATGCTTTTaGTTACGTTGCCCAAGCCATAGATTGCTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: PSWMIPLKKPCF*LRCPSHRLLPG
Trigger: TCCAGGAAGCAATCTATGGCTTGGGCAACGTAATCAAAAGCATGGCTTTTTCAAAGGAATCATCCAAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8
CDS CAA 90 bp AAATCCGCTGGCCCTCAGCAAGAACTTTTCCTCCATAGATACATTTaGGTCTGCAAACTTTACAACATTGGCCAGAAATATGCACAGGAA +
Preference number: 6 (lower is better)
Translates to: KSAGPQQELFLHRYI*VCKLYNIGQKYAQE
Trigger: TTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTGCAGACCAAAATGTATCTATGGAGGAAAAGTTCTTGCTGAGGGCCAGCGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
CDS CAA 72 bp TATGCAGAGTTGCCCTGGACAGAGATGTATCCATTCTaGCACTCACAAGTCGCTTTTGTATTCCAATTTTTG +
Preference number: 6 (lower is better)
Translates to: YAELPWTEMYPF*HSQVAFVFQFL
Trigger: CAAAAATTGGAATACAAAAGCGACTTGTGAGTGCAAGAATGGATACATCTCTGTCCAGGGCAACTCTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081872.13
ENSMUST00000107603.2
ENSMUST00000151721.8