Pregenerated sensors for NELL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055409Ensembl transcript IDs: ENSMUST00000081872.13, ENSMUST00000107603.2, ENSMUST00000151721.8
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TGTGTCCTGTTGAGTGCTGTGGGTGCAGCACTAGGTCTGTGGCACTaGGTCACAGTCCAGCTGGACACCATGGATATACCTCAAATTTCT | + |
Preference number: 1 (lower is better) Translates to: CVLLSAVGAALGLWH*VTVQLDTMDIPQIS Trigger: AGAAATTTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAGTGCCACAGACCTAGTGCTGCACCCACAGCACTCAACAGGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 90 bp | GCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATaGTACACATCTCCATCAACACGTCCCTCAGGAACCGCCATTCTG | + |
Preference number: 1 (lower is better) Translates to: ASVFNSLKQKDAVDR*YTSPSTRPSGTAIL Trigger: CAGAATGGCGGTTCCTGAGGGACGTGTTGATGGAGATGTGTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 90 bp | TATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAAGTaGTATACCACTGAGCCACACGCACAGCCTCCAGACCAATGCAAT | + |
Preference number: 1 (lower is better) Translates to: YDVGDGSKGCTYTTK*YTTEPHAQPPDQCN Trigger: ATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCACTTGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CCA 90 bp | ATTGATCAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTaGGAGCAATCACCAAGCCAAACTTGTCTTAAAGGCTTTCCCCCT | + |
Preference number: 1 (lower is better) Translates to: IDQSVSKSASREQLT*EQSPSQTCLKGFPP Trigger: AGGGGGAAAGCCTTTAAGACAAGTTTGGCTTGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTGATCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CCA 90 bp | TTTGCTGTTCTTGCAGAGATCTGGCTTCTATTCCCAGCACCCATGTaGCAGTTAACCAACATCTGTAACTTCAGTTCTAGGGGCAGGGTA | + |
Preference number: 1 (lower is better) Translates to: FAVLAEIWLLFPAPM*QLTNICNFSSRGRV Trigger: TACCCTGCCCCTAGAACTGAAGTTACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGCAAGAACAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 90 bp | ACCAAGTGCTATACCACTGAGCCACACGCACAGCCTCCAGACCAATaGAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTGCTAAGT | + |
Preference number: 1 (lower is better) Translates to: TKCYTTEPHAQPPDQ*NLIMFIPSLPTLLS Trigger: ACTTAGCAGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCACTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR TCA 90 bp | TTGCTGCTGTTATATGAATGCCTCTCTATGTTTCCCAGGATAGATTaGAATCATGAAGCCAAGGGATTCCCTGTTCTACTTCCACCTCCA | + |
Preference number: 1 (lower is better) Translates to: LLLLYECLSMFPRID*NHEAKGFPVLLPPP Trigger: TGGAGGTGGAAGTAGAACAGGGAATCCCTTGGCTTCATGATTTCAATCTATCCTGGGAAACATAGAGAGGCATTCATATAACAGCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 90 bp | TCGAACAGGAGGACGCTGTTTCACGCAGAGATCTGTAGATGCAGTTaGAAGTCCTGTAAATGTCTTTGTTTTTATAACATTGGAAAGGCT | + |
Preference number: 1 (lower is better) Translates to: SNRRTLFHAEICRCS*KSCKCLCFYNIGKA Trigger: AGCCTTTCCAATGTTATAAAAACAAAGACATTTACAGGACTTGCAACTGCATCTACAGATCTCTGCGTGAAACAGCGTCCTCCTGTTCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR TCA 90 bp | TCCCCTTTAGTGTATCATAATTGCCCTAAGCAGTTTTTAGCTGAGTaGGTGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGT | + |
Preference number: 1 (lower is better) Translates to: SPLVYHNCPKQFLAE*VGICVQQFETERCC Trigger: ACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCACTCACTCAGCTAAAAACTGCTTAGGGCAATTATGATACACTAAAGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CCA 90 bp | TGTCTTGGAGAAACAGTTCTAAGACATACATATGTACTTTCTCTGTaGCAGAGGTCAGCAGACTTTCTACAGAGGAGGAAAAGAATAGTG | + |
Preference number: 1 (lower is better) Translates to: CLGETVLRHTYVLSL*QRSADFLQRRKRIV Trigger: CACTATTCTTTTCCTCCTCTGTAGAAAGTCTGCTGACCTCTGCCACAGAGAAAGTACATATGTATGTCTTAGAACTGTTTCTCCAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR TCA 90 bp | TGGAATCCTTTAAATGTATCTGTAAATGATCTGACAAGGGAAATGTaGTTTACAGCACGGAGACTCAACAACCATCGACCGAAATACACG | + |
Preference number: 1 (lower is better) Translates to: WNPLNVSVNDLTREM*FTARRLNNHRPKYT Trigger: CGTGTATTTCGGTCGATGGTTGTTGAGTCTCCGTGCTGTAAATCACATTTCCCTTGTCAGATCATTTACAGATACATTTAAAGGATTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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3UTR CAA 90 bp | TGCTATACCACTGAGCCACACGCACAGCCTCCAGACCAATGCAATTaGATCATGTTTATTCCTTCTCTCCCAACTCTGCTAAGTTCCACC | + |
Preference number: 2 (lower is better) Translates to: CYTTEPHAQPPDQCN*IMFIPSLPTLLSST Trigger: GGTGGAACTTAGCAGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR CCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTCCTCTTCCTCAGGTTaGATGGTCATTTTGTCCATT | + |
Preference number: 2 (lower is better) Translates to: RMSKVVKATQTPSSDGDFSSSSG*MVILSI Trigger: AATGGACAAAATGACCATCCAACCTGAGGAAGAGGA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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3UTR-3UTR CCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTTCCTCAGGTTGGATaGTCATTTTGTCCATTTTCT | + |
Preference number: 2 (lower is better) Translates to: RMSKVVKATQTPSSDGDFLPQVG*SFCPFS Trigger: AGAAAATGGACAAAATGACCATCCAACCTGAGGAAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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3UTR-3UTR CCA 90 bp | TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACTCCTCTTCCTCAGGTTaGATGGTCATTTTGTCCATT | + |
Preference number: 2 (lower is better) Translates to: WASVFNSLKQKDAVDRCYSSSSG*MVILSI Trigger: AATGGACAAAATGACCATCCAACCTGAGGAAGAGGA...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR TCA 90 bp | ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTCTGTGTTCAACAGTTTaGAACAGAAAGATGCTGTGG | + |
Preference number: 2 (lower is better) Translates to: TASRPMQFDHVYSFSPNSLCSTV*NRKMLW Trigger: CCACAGCATCTTTCTGTTTCAAACTGTTGAACACAG...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR GCA 90 bp | ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTTATTGTTGCTGTTGCTaGTGTTATATGAATGCCTCT | + |
Preference number: 2 (lower is better) Translates to: TASRPMQFDHVYSFSPNSYCCCC*CYMNAS Trigger: AGAGGCATTCATATAACAGCAGCAACAGCAACAATA...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR TCA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGATAGATTGAAATCATaGAGCCAAGGGATTCCCTGT | + |
Preference number: 2 (lower is better) Translates to: LFVFMMLGMEARVVHILPDRLKS*SQGIPC Trigger: ACAGGGAATCCCTTGGCTTCATGATTTCAATCTATC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR CCA 90 bp | ATTGTGATTCATCACATAGAGTCGGTTTCATGTAGAGCACTCCATTTTCCCAAACTTCCTCAGGTTGGATaGTCATTTTGTCCATTTTCT | + |
Preference number: 2 (lower is better) Translates to: IVIHHIESVSCRALHFPKLPQVG*SFCPFS Trigger: AGAAAATGGACAAAATGACCATCCAACCTGAGGAAG...TTTGGGAAAATGGAGTGCTCTACATGAAACCGACTCTATGTGATGAATCACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR GCA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCTTTGAAACAGAAAGATaGTGTGGACAGATGCTACAC | + |
Preference number: 2 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVFETER*CGQMLH Trigger: GTGTAGCATCTGTCCACAGCATCTTTCTGTTTCAAA...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR GCA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATCTGTTAAGAGCATTTaGTGTTCTTGCAGAGATCTG | + |
Preference number: 2 (lower is better) Translates to: LFVFMMLGMEARVVHILPSVKSI*CSCRDL Trigger: CAGATCTCTGCAAGAACAGCAAATGCTCTTAACAGA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR GCA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCTGTAATTTATCACATTaGATCGGGCTTTGCCAAGTG | + |
Preference number: 2 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVCNLSH*IGLCQV Trigger: CACTTGGCAAAGCCCGATGCAATGTGATAAATTACA...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR GCA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCATCTGTAGATGCAGTTaGAAGTCCTGTAAATGTCTT | + |
Preference number: 2 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVICRCS*KSCKCL Trigger: AAGACATTTACAGGACTTGCAACTGCATCTACAGAT...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CAA 90 bp | TGTCTATCTCCTAAGAAGATCGAGTCATCAAATGTTACTCTTAACTaGTCATTAAGTAGCTACCATTTTTCTCTTGCAAACTTCAGAGTG | + |
Preference number: 2 (lower is better) Translates to: CLSPKKIESSNVTLN*SLSSYHFSLANFRV Trigger: CACTCTGAAGTTTGCAAGAGAAAAATGGTAGCTACTTAATGACAAGTTAAGAGTAACATTTGATGACTCGATCTTCTTAGGAGATAGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CCA 72 bp | TTGAGTGCTGTGGGTGCAGCACTAGGTCTGTGGCACTaGGTCACAGTCCAGCTGGACACCATGGATATACCT | + |
Preference number: 3 (lower is better) Translates to: LSAVGAALGLWH*VTVQLDTMDIP Trigger: AGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAGTGCCACAGACCTAGTGCTGCACCCACAGCACTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 72 bp | GGGGATGGAAGCAAGGGTTGTACATATACTACCAAGTaGTATACCACTGAGCCACACGCACAGCCTCCAGAC | + |
Preference number: 3 (lower is better) Translates to: GDGSKGCTYTTK*YTTEPHAQPPD Trigger: GTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCACTTGGTAGTATATGTACAACCCTTGCTTCCATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CCA 72 bp | TCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTaGGAGCAATCACCAAGCCAAACTTGTCTTAAAGGC | + |
Preference number: 3 (lower is better) Translates to: SVSKSASREQLT*EQSPSQTCLKG Trigger: GCCTTTAAGACAAGTTTGGCTTGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CCA 72 bp | GTCTGTGGCACTGGGTCACAGTCCAGCTGGACACCATaGATATACCTCAAATTTCTGGACTCAGTCTATAGG | + |
Preference number: 3 (lower is better) Translates to: VCGTGSQSSWTP*IYLKFLDSVYR Trigger: CCTATAGACTGAGTCCAGAAATTTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAGTGCCACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR TCA 72 bp | CCAGAACTGTTGCCTATTCTCACACTGTACTCTCTATaGCAATGTTGTCAGGCCAGTGACAGTAGGAGGGAG | + |
Preference number: 3 (lower is better) Translates to: PELLPILTLYSL*QCCQASDSRRE Trigger: CTCCCTCCTACTGTCACTGGCCTGACAACATTGTCATAGAGAGTACAGTGTGAGAATAGGCAACAGTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR CAA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTCCTCTTCCTCAGGTaGGATGGTCATTTTGTCCAT | + |
Preference number: 3 (lower is better) Translates to: RMSKVVKATQTPSSDGDFLLFLR*DGHFVH Trigger: ATGGACAAAATGACCATCCAACCTGAGGAAGAGGAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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3UTR TCA 72 bp | CAAGGGTTGTACATATACTACCAAGTGCTATACCACTaGGCCACACGCACAGCCTCCAGACCAATGCAATTT | + |
Preference number: 3 (lower is better) Translates to: QGLYIYYQVLYH*ATRTASRPMQF Trigger: AAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATAGCACTTGGTAGTATATGTACAACCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 72 bp | TGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTaGTGTTCTTGCAGAGATCTGGCTTCTATTCCCAGC | + |
Preference number: 3 (lower is better) Translates to: WGWKTVSSVKSI*CSCRDLASIPS Trigger: GCTGGGAATAGAAGCCAGATCTCTGCAAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CCA 72 bp | CTTGCAGAGATCTGGCTTCTATTCCCAGCACCCATGTaGCAGTTAACCAACATCTGTAACTTCAGTTCTAGG | + |
Preference number: 3 (lower is better) Translates to: LAEIWLLFPAPM*QLTNICNFSSR Trigger: CCTAGAACTGAAGTTACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CCA 72 bp | GTTCTACTTCCACCTCCACCCTCCAATACCAATGTCTaGAACTACAAGCACATGCCACCTTATCTGGATCAA | + |
Preference number: 3 (lower is better) Translates to: VLLPPPPSNTNV*NYKHMPPYLDQ Trigger: TTGATCCAGATAAGGTGGCATGTGCTTGTAGTTCCAGACATTGGTATTGGAGGGTGGAGGTGGAAGTAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CCA 72 bp | GTCAGGCCAGTGACAGTAGGAGGGAGAGCATCATCTTaGGATTACATTTCTTGCCAATTGACCATGTCTATC | + |
Preference number: 3 (lower is better) Translates to: VRPVTVGGRASS*DYISCQLTMSI Trigger: GATAGACATGGTCAATTGGCAAGAAATGTAATCCCAAGATGATGCTCTCCCTCCTACTGTCACTGGCCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR TCA 72 bp | ATGCCTCTCTATGTTTCCCAGGATAGATTGAAATCATaGAGCCAAGGGATTCCCTGTTCTACTTCCACCTCC | + |
Preference number: 3 (lower is better) Translates to: MPLYVSQDRLKS*SQGIPCSTSTS Trigger: GGAGGTGGAAGTAGAACAGGGAATCCCTTGGCTTCATGATTTCAATCTATCCTGGGAAACATAGAGAGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 72 bp | TTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATaGTACACATCTCCATCAACACGTCCCTCAGGAACC | + |
Preference number: 3 (lower is better) Translates to: FNSLKQKDAVDR*YTSPSTRPSGT Trigger: GGTTCCTGAGGGACGTGTTGATGGAGATGTGTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 72 bp | TATACCACTGAGCCACACGCACAGCCTCCAGACCAATaGAATTTGATCATGTTTATTCCTTCTCTCCCAACT | + |
Preference number: 3 (lower is better) Translates to: YTTEPHAQPPDQ*NLIMFIPSLPT Trigger: AGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGTGGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR CAA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTCTCCTCTTCCTCAGGTaGGATGGTCATTTTGTCCAT | + |
Preference number: 3 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLLLFLR*DGHFVH Trigger: ATGGACAAAATGACCATCCAACCTGAGGAAGAGGAG...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR TCA 72 bp | TTTCCATTCAAAACCTACTGGACAAACACAACATTCTaGGGTCTGACACAGCTGTGTCCTGTTGAGTGCTGT | + |
Preference number: 3 (lower is better) Translates to: FPFKTYWTNTTF*GLTQLCPVECC Trigger: ACAGCACTCAACAGGACACAGCTGTGTCAGACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 72 bp | TTTATCCATAGAGCAATGTCCTTAGAGGAACAGCACTaGGCAGGAATCAGAAACCTTAACTGTCAGGTGCAA | + |
Preference number: 3 (lower is better) Translates to: FIHRAMSLEEQH*AGIRNLNCQVQ Trigger: TTGCACCTGACAGTTAAGGTTTCTGATTCCTGCGCAGTGCTGTTCCTCTAAGGACATTGCTCTATGGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 72 bp | AACAGGAGGACGCTGTTTCACGCAGAGATCTGTAGATaGAGTTGCAAGTCCTGTAAATGTCTTTGTTTTTAT | + |
Preference number: 3 (lower is better) Translates to: NRRTLFHAEICR*SCKSCKCLCFY Trigger: ATAAAAACAAAGACATTTACAGGACTTGCAACTGCATCTACAGATCTCTGCGTGAAACAGCGTCCTCCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR CAA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTTCTGTGTTCAACAGTTaGAAACAGAAAGATGCTGTG | + |
Preference number: 3 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLSVFNS*KQKDAV Trigger: CACAGCATCTTTCTGTTTCAAACTGTTGAACACAGA...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR-3UTR CAA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCGAGCATTTGCTGTTCTaGCAGAGATCTGGCTTCTAT | + |
Preference number: 3 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVEHLLF*QRSGFY Trigger: ATAGAAGCCAGATCTCTGCAAGAACAGCAAATGCTC...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR GCA 72 bp | AGCACTGCGCAGGAATCAGAAACCTTAACTGTCAGGTaGAAAGGACATAAACCAAATACTCTGAAAAGAATA | + |
Preference number: 3 (lower is better) Translates to: STAQESETLTVR*KGHKPNTLKRI Trigger: TATTCTTTTCAGAGTATTTGGTTTATGTCCTTTGCACCTGACAGTTAAGGTTTCTGATTCCTGCGCAGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR TCA 72 bp | TTATATGAATGCCTCTCTATGTTTCCCAGGATAGATTaGAATCATGAAGCCAAGGGATTCCCTGTTCTACTT | + |
Preference number: 3 (lower is better) Translates to: LYECLSMFPRID*NHEAKGFPVLL Trigger: AAGTAGAACAGGGAATCCCTTGGCTTCATGATTTCAATCTATCCTGGGAAACATAGAGAGGCATTCATATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCCAGGCAGGGGTCACTaGCACAGCGGGGACAACACT | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFPGRGH*HSGDNT Trigger: AGTGTTGTCCCCGCTGTGTCAGTGACCCCTGCCTGG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAGTATCACCCCTGAGGTaGACGGCTTCTGCTGCACTG | + |
Preference number: 4 (lower is better) Translates to: QSVSKSASREQLTWEQSPVSPLR*TASAAL Trigger: CAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATAC...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCGACAGTATCACCCCTaGGGTGGACGGCTTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGRQYHP*GGRLLL Trigger: CAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTACTGTCCATCGGCCATaGGGTAGGGAAGGGCCTCAG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGTVHRP*GREGPQ Trigger: CTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGACCTCGGCAGACCCTaGAGCACTGGTTCTCCGGAA | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGDLGRP*STGSPE Trigger: TTCCGGAGAACCAGTGCTGCAGGGTCTGCCGAGGTC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGCCCAGCACTGTCCTaGCGGTGCACACACAGAACC | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGSPALS*RCTHRT Trigger: GGTTCTGTGTGTGCACCGCCAGGACAGTGCTGGGCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGTCCAGCCACCTGAGTaGCGCCCAGGGTGGTGTTCA | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSVQPPE*RPGWCS Trigger: TGAACACCACCCTGGGCGTCACTCAGGTGGCTGGAC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTACATGGAGTAGGAGGTaGGAGGCGCTCACAGACAGC | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGTWSRR*EALTDS Trigger: GCTGTCTGTGAGCGCCTCTCACCTCCTACTCCATGT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTATCACCCCTGAGGTaGACGGCTTCTGCTGCACTG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGVSPLR*TASAAL Trigger: CAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGACATCGGCACTGCTaGCAGCTGTGGGTCCAGTTG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGRHRHC*QLWVQL Trigger: CAACTGGACCCACAGCTGCCAGCAGTGCCGATGTCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTGCACTGTCCTGGCGGTaGACACACAGAACCACAAAA | + |
Preference number: 4 (lower is better) Translates to: AEIWLLFPAPMWQLTNICALSWR*THRTTK Trigger: TTTTGTGGTTCTGTGTGTGCACCGCCAGGACAGTGC...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTACTGTCCATCGGCCATaGGGTAGGGAAGGGCCTCAG | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSTVHRP*GREGPQ Trigger: CTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCATGCATGTTGGGCAAGTaGGATTTAGGTTGGGGCACT | + |
Preference number: 4 (lower is better) Translates to: QSVSKSASREQLTWEQSPCMLGK*DLGWGT Trigger: AGTGCCCCAACCTAAATCGCACTTGCCCAACATGCA...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTCATGGAAACCGCTTCTaGACTCACAGTGGTACCACC | + |
Preference number: 4 (lower is better) Translates to: AEIWLLFPAPMWQLTNICHGNRF*THSGTT Trigger: GGTGGTACCACTGTGAGTGCAGAAGCGGTTTCCATG...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTAGCAGCCCACTCACTTaGCAGGTCTTCTCACAGTGG | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFSSPLT*QVFSQW Trigger: CCACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCACACACGGATGTATCCTaGGATGCAGTCACAGCGATA | + |
Preference number: 4 (lower is better) Translates to: QSVSKSASREQLTWEQSPHTDVS*DAVTAI Trigger: TATCGCTGTGACTGCATCCCAGGATACATCCGTGTG...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTCCTGGTGTCACACTCTaGGCAGCAGAAAAGGTCAAC | + |
Preference number: 4 (lower is better) Translates to: AEIWLLFPAPMWQLTNICPGVTL*AAEKVN Trigger: GTTGACCTTTTCTGCTGCCCAGAGTGTGACACCAGG...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGTGATGATGTCCATCTaGAGGTCAGGGTCCATCCCA | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFVMMSI*RSGSIP Trigger: TGGGATGGACCCTGACCTTCAGATGGACATCATCAC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGCTTCTCACTCACATaGGGGGCTGAGTGGATCTCT | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGSFSLT*GAEWIS Trigger: AGAGATCCACTCAGCCCCTCATGTGAGTGAGAAGCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTAGTCTGGGGAACAGTTaGGTGGGGGACAGGACATCC | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSSLGNS*VGDRTS Trigger: GGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCACAGTGGCTTCCTGTaGATCCAGAAGGACAGACAC | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFHSGFL*IQKDRH Trigger: GTGTCTGTCCTTCTGGATTCACAGGAAGCCACTGTG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCACTCCCATTCTTGCATTaGCAGGTTGTACAGGGAGAT | + |
Preference number: 4 (lower is better) Translates to: QSVSKSASREQLTWEQSPLPFLH*QVVQGD Trigger: ATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAG...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGCACTGTCCTGGCGGTaGACACACAGAACCACAAAA | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFALSWR*THRTTK Trigger: TTTTGTGGTTCTGTGTGTGCACCGCCAGGACAGTGC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTTGCATGTGCAGTTCCTaGAGTTGTCACCATCTACCC | + |
Preference number: 4 (lower is better) Translates to: AEIWLLFPAPMWQLTNICCMCSS*SCHHLP Trigger: GGGTAGATGGTGACAACTGCAGGAACTGCACATGCA...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTCAGAATCCACACCTaGCCATTATGCTTCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFLRIHT*PLCFSP Trigger: GGGGCTGAAGCATAATGGGCAGGTGTGGATTCTGAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTACATGGAGTAGGAGGTaGGAGGCGCTCACAGACAGC | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLTWSRR*EALTDS Trigger: GCTGTCTGTGAGCGCCTCTCACCTCCTACTCCATGT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTCTTACAGGAACAGACTaGACACCTGTCTTCTCTCAG | + |
Preference number: 4 (lower is better) Translates to: AEIWLLFPAPMWQLTNICLTGTD*TPVFSQ Trigger: CTGAGAGAAGACAGGTGTTCAGTCTGTTCCTGTAAG...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTGCATGTTGGGCAAGTaGGATTTAGGTTGGGGCACT | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFCMLGK*DLGWGT Trigger: AGTGCCCCAACCTAAATCGCACTTGCCCAACATGCA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTGCATGTGCAGTTCCTaGAGTTGTCACCATCTACCC | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFCMCSS*SCHHLP Trigger: GGGTAGATGGTGACAACTGCAGGAACTGCACATGCA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCCACAGCACCACTTTTaGATGTGCAGTTCCTGCAGT | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGPQHHF*MCSSCS Trigger: ACTGCAGGAACTGCACATGCAAAAGTGGTGCTGTGG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCCACAGCACCACTTTTaGATGTGCAGTTCCTGCAGT | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFPQHHF*MCSSCS Trigger: ACTGCAGGAACTGCACATGCAAAAGTGGTGCTGTGG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAACACTTAGGTGCTTCTaGACAGAAGTTATGACCTCG | + |
Preference number: 4 (lower is better) Translates to: QSVSKSASREQLTWEQSPTLRCF*TEVMTS Trigger: CGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGT...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCACACGGATGTATCCTaGGATGCAGTCACAGCGATA | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFHTDVS*DAVTAI Trigger: TATCGCTGTGACTGCATCCCAGGATACATCCGTGTG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGTACAGCTGTGTCCCTaGACTGTGTTGGTACAGATG | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFVQLCP*TVLVQM Trigger: CATCTGTACCAACACAGTCCAGGGACACAGCTGTAC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTATTTCCCACGTAGCCTaGCTGGCAGGTACAGCTGTG | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSISHVA*LAGTAV Trigger: CACAGCTGTACCTGCCAGCCAGGCTACGTGGGAAAT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTTAACGCAGCGGGAGTaGTTGTGGCACTCAACGAAT | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGLTQRE*LWHSTN Trigger: ATTCGTTGAGTGCCACAACCACTCCCGCTGCGTTAA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCACTGCTGGCAGCTGTaGGTCCAGTTGTCTCCACTT | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSHCWQL*VQLSPL Trigger: AAGTGGAGACAACTGGACCCACAGCTGCCAGCAGTG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGTGATGATGTCCATCTaGAGGTCAGGGTCCATCCCA | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSVMMSI*RSGSIP Trigger: TGGGATGGACCCTGACCTTCAGATGGACATCATCAC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGAGGGCAAGCTTCTGTaGTTTTTACCAAGACTCCAC | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFEGKLL*FLPRLH Trigger: GTGGAGTCTTGGTAAAAATCACAGAAGCTTGCCCTC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACCACAGTGGCTTCCTGTaGATCCAGAAGGACAGACAC | + |
Preference number: 4 (lower is better) Translates to: WASVFNSLKQKDAVDRCYHSGFL*IQKDRH Trigger: GTGTCTGTCCTTCTGGATTCACAGGAAGCCACTGTG...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTTACAGGAACAGACTaGACACCTGTCTTCTCTCAG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGLTGTD*TPVFSQ Trigger: CTGAGAGAAGACAGGTGTTCAGTCTGTTCCTGTAAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCCCAGGCAGGGGTCACTaGCACAGCGGGGACAACACT | + |
Preference number: 4 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVPGRGH*HSGDNT Trigger: AGTGTTGTCCCCGCTGTGTCAGTGACCCCTGCCTGG...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTCCCATTCTTGCATTaGCAGGTTGTACAGGGAGAT | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFLPFLH*QVVQGD Trigger: ATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAGCTCATAAATCCTATTaGAGTCGACATGGAGTAGGA | + |
Preference number: 4 (lower is better) Translates to: QSVSKSASREQLTWEQSPAHKSY*SRHGVG Trigger: TCCTACTCCATGTCGACTGCAATAGGATTTATGAGC...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCACCACTTTTGCATGTaGAGTTCCTGCAGTTGTCAC | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFHHFCM*SSCSCH Trigger: GTGACAACTGCAGGAACTGCACATGCAAAAGTGGTG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCATTGGCCAGAAATATaGACAGGAAGTGAGTCTGGG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGHWPEI*TGSESG Trigger: CCCAGACTCACTTCCTGTGCATATTTCTGGCCAATG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGGTACCTCCGTATCTaGAACCCTCTTCACAGAATG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGRYLRI*NPLHRM Trigger: CATTCTGTGAAGAGGGTTGCAGATACGGAGGTACCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
||
CDS-3UTR GCA 90 bp | GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTATTCATCAATATCAATaGAGGACTCCCCGGACAGTG | + |
Preference number: 4 (lower is better) Translates to: AEIWLLFPAPMWQLTNICIHQYQ*RTPRTV Trigger: CACTGTCCGGGGAGTCCTGCATTGATATTGATGAAT...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACGCGTATCTCTTCTCTTaGGCCACTGCTCTCCAGTTC | + |
Preference number: 4 (lower is better) Translates to: WASVFNSLKQKDAVDRCYAYLFS*ATALQF Trigger: GAACTGGAGAGCAGTGGCCCAAGAGAAGAGATACGC...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGCGTATCTCTTCTCTTaGGCCACTGCTCTCCAGTTC | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSAYLFS*ATALQF Trigger: GAACTGGAGAGCAGTGGCCCAAGAGAAGAGATACGC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTAGCAGCCCACTCACTTaGCAGGTCTTCTCACAGTGG | + |
Preference number: 4 (lower is better) Translates to: TASRPMQFDHVYSFSPNSSSPLT*QVFSQW Trigger: CCACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCT...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTATTCCCGGCAGGTCTTaGTTAAAATCCGCTGGCCCT | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSIPGRS*LKSAGP Trigger: AGGGCCAGCGGATTTTAACCAAGACCTGCCGGGAAT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCCTGGTGTCACACTCTaGGCAGCAGAAAAGGTCAAC | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSPGVTL*AAEKVN Trigger: GTTGACCTTTTCTGCTGCCCAGAGTGTGACACCAGG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTCACTGCTGGCAGCTGTaGGTCCAGTTGTCTCCACTT | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLHCWQL*VQLSPL Trigger: AAGTGGAGACAACTGGACCCACAGCTGCCAGCAGTG...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTGTCCAGCCACCTGAGTaGCGCCCAGGGTGGTGTTCA | + |
Preference number: 4 (lower is better) Translates to: AVIYHIASGFAKCYIQFVVQPPE*RPGWCS Trigger: TGAACACCACCCTGGGCGTCACTCAGGTGGCTGGAC...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCCGACAGTATCACCCCTaGGGTGGACGGCTTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVRQYHP*GGRLLL Trigger: CAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCG...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAATATGATCCTTCTCTaGGCAGTTCAAAGGAGGGCA | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGNMILL*AVQRRA Trigger: TGCCCTCCTTTGAACTGCTCAGAGAAGGATCATATT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTTCTCCGGAAGAATATaGTCCTTCTCTGAGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFFSGRI*SFSEQF Trigger: GAACTGCTCAGAGAAGGATCATATTCTTCCGGAGAA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTATCCTCCTGCTAAGTTaGTGCAGGCAGAGTCATTCC | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSILLLS*CRQSHS Trigger: GGAATGACTCTGCCTGCATCAACTTAGCAGGAGGAT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGACCTCGGCAGACCCTaGAGCACTGGTTCTCCGGAA | + |
Preference number: 4 (lower is better) Translates to: LFVFMMLGMEARVVHILPDLGRP*STGSPE Trigger: TTCCGGAGAACCAGTGCTGCAGGGTCTGCCGAGGTC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACACTTAGGTGCTTCTaGACAGAAGTTATGACCTCG | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFTLRCF*TEVMTS Trigger: CGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGATATCTTCACAGTATaGAGAGTTGCCCTGGACAGA | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFDIFTV*RVALDR Trigger: TCTGTCCAGGGCAACTCTGCATACTGTGAAGATATC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTCTTCACAGAATGCTTTaGAGACAGTACCATTTCCCA | + |
Preference number: 4 (lower is better) Translates to: AEIWLLFPAPMWQLTNICLHRML*RQYHFP Trigger: TGGGAAATGGTACTGTCTGCAAAGCATTCTGTGAAG...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGACTCTCCCATTCTTaGATTGACAGGTTGTACAGG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGRLSHS*IDRLYR Trigger: CCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTAGACTCTCCCATTCTTaGATTGACAGGTTGTACAGG | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFRLSHS*IDRLYR Trigger: CCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACAGAAATGCCTTACTaGCATTGTGTAGTCCAGCCA | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFTEMPY*HCVVQP Trigger: TGGCTGGACTACACAATGCCAGTAAGGCATTTCTGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTATGCAGAGTTGCCCTaGACAGAGATGTATCCATTC | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFYAELP*TEMYPF Trigger: GAATGGATACATCTCTGTCCAGGGCAACTCTGCATA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTCCCTGGACTGTGTTaGTACAGATGGCATTTTTGT | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGVPGLC*YRWHFC Trigger: ACAAAAATGCCATCTGTACCAACACAGTCCAGGGAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTCAACATTTGGATTCTaGCAATCACAAGCTGTCCGC | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGSTFGF*QSQAVR Trigger: GCGGACAGCTTGTGATTGCCAGAATCCAAATGTTGA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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3UTR CAA 72 bp | ACTGAGCCACACGCACAGCCTCCAGACCAATGCAATTaGATCATGTTTATTCCTTCTCTCCCAACTCTGCTA | + |
Preference number: 4 (lower is better) Translates to: TEPHAQPPDQCN*IMFIPSLPTLL Trigger: TAGCAGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGTGCGTGTGGCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCAGTCTGGGGAACAGTTaGGTGGGGGACAGGACATCC | + |
Preference number: 4 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVSLGNS*VGDRTS Trigger: GGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACT...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGAGGGCAAGCTTCTGTaGTTTTTACCAAGACTCCAC | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSEGKLL*FLPRLH Trigger: GTGGAGTCTTGGTAAAAATCACAGAAGCTTGCCCTC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTTCATTCCAACAAGTGTaGGTTCTTAAGGCACATTCA | + |
Preference number: 4 (lower is better) Translates to: AEIWLLFPAPMWQLTNICSFQQV*VLKAHS Trigger: TGAATGTGCCTTAAGAACTCACACTTGTTGGAATGA...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTATCCTCCTGCTAAGTTaGTGCAGGCAGAGTCATTCC | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLILLLS*CRQSHS Trigger: GGAATGACTCTGCCTGCATCAACTTAGCAGGAGGAT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCTTCTCTTGGGCCACTaGTCTCCAGTTCAAAATAGC | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSLLLGH*SPVQNS Trigger: GCTATTTTGAACTGGAGAGCAGTGGCCCAAGAGAAG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGCTCATAAATCCTATTaGAGTCGACATGGAGTAGGA | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFAHKSY*SRHGVG Trigger: TCCTACTCCATGTCGACTGCAATAGGATTTATGAGC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCACCACTTTTGCATGTaGAGTTCCTGCAGTTGTCAC | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSHHFCM*SSCSCH Trigger: GTGACAACTGCAGGAACTGCACATGCAAAAGTGGTG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACAGTAGTGCATCTTTaGTGCACACTCATCGATATC | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFTVVHL*CTLIDI Trigger: GATATCGATGAGTGTGCAGCAAAGATGCACTACTGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGGATGTATCCTGGGATaGAGTCACAGCGATATAACC | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSGCILG*SHSDIT Trigger: GGTTATATCGCTGTGACTGCATCCCAGGATACATCC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACCCTCTTCACAGAATaGTTTGCAGACAGTACCATT | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFTLFTE*FADSTI Trigger: AATGGTACTGTCTGCAAAGCATTCTGTGAAGAGGGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTTGGTTAAAATCCGCTaGCCCTCAGCAAGAACTTTT | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGLVKIR*PSARTF Trigger: AAAAGTTCTTGCTGAGGGCCAGCGGATTTTAACCAA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTGTACAGCTGTGTCCCTaGACTGTGTTGGTACAGATG | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLVQLCP*TVLVQM Trigger: CATCTGTACCAACACAGTCCAGGGACACAGCTGTAC...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAAGACATCGGCACTGCTaGCAGCTGTGGGTCCAGTTG | + |
Preference number: 4 (lower is better) Translates to: LFVFMMLGMEARVVHILPRHRHC*QLWVQL Trigger: CAACTGGACCCACAGCTGCCAGCAGTGCCGATGTCT...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTCTCTCTGTACATCTTaGAACAGAAATGCCTTACTG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGSLCTS*NRNALL Trigger: CAGTAAGGCATTTCTGTTTCAAGATGTACAGAGAGA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTGGACTCCCCGGACAGTaGATAGGTCCCATCGTCATG | + |
Preference number: 4 (lower is better) Translates to: AVIYHIASGFAKCYIQFVGLPGQ*IGPIVM Trigger: CATGACGATGGGACCTATTCACTGTCCGGGGAGTCC...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTCATTCCAACAAGTGTaGGTTCTTAAGGCACATTCA | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFSFQQV*VLKAHS Trigger: TGAATGTGCCTTAAGAACTCACACTTGTTGGAATGA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTACCAAGTCTCGTCTCTaGATAATTCAGTTTTGCAGT | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFTKSRL*IIQFCS Trigger: ACTGCAAAACTGAATTATGCAGAGACGAGACTTGGT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTCATTGGCCAGAAATATaGACAGGAAGTGAGTCTGGG | + |
Preference number: 4 (lower is better) Translates to: TASRPMQFDHVYSFSPNSHWPEI*TGSESG Trigger: CCCAGACTCACTTCCTGTGCATATTTCTGGCCAATG...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCATTGTATTCCAATTTTTaGATTCCGAGTTTTCTCCAC | + |
Preference number: 4 (lower is better) Translates to: QSVSKSASREQLTWEQSPLYSNF*IPSFLH Trigger: GTGGAGAAAACTCGGAATGCAAAAATTGGAATACAA...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACACAGAAATGCCTTACTaGCATTGTGTAGTCCAGCCA | + |
Preference number: 4 (lower is better) Translates to: WASVFNSLKQKDAVDRCYTEMPY*HCVVQP Trigger: TGGCTGGACTACACAATGCCAGTAAGGCATTTCTGT...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTTTTGCAGTCATCTTaGCCAAAAGCTCTTGCAAAT | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGVLQSS*PKALAN Trigger: ATTTGCAAGAGCTTTTGGCCAAGATGACTGCAAAAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACTATGCAGAGTTGCCCTaGACAGAGATGTATCCATTC | + |
Preference number: 4 (lower is better) Translates to: WASVFNSLKQKDAVDRCYYAELP*TEMYPF Trigger: GAATGGATACATCTCTGTCCAGGGCAACTCTGCATA...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTATATCTTTCTCACAGTaGCTTCCTGTGAATCCAGAA | + |
Preference number: 4 (lower is better) Translates to: RMSKVVKATQTPSSDGDFISFSQ*LPVNPE Trigger: TTCTGGATTCACAGGAAGCCACTGTGAGAAAGATAT...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTAAAAAGCCATGCTTTTaGTTACGTTGCCCAAGCCAT | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSKKPCF*LRCPSH Trigger: ATGGCTTGGGCAACGTAATCAAAAGCATGGCTTTTT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR TCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTTTCTCCGGAAGAATATaGTCCTTCTCTGAGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLFSGRI*SFSEQF Trigger: GAACTGCTCAGAGAAGGATCATATTCTTCCGGAGAA...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTGCATAATTCAGTTTTaGAGTCATCTTGGCCAAAAG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGCIIQF*SHLGQK Trigger: CTTTTGGCCAAGATGACTGCAAAACTGAATTATGCA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTCTTCACAGAATGCTTTaGAGACAGTACCATTTCCCA | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSLHRML*RQYHFP Trigger: TGGGAAATGGTACTGTCTGCAAAGCATTCTGTGAAG...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTCAACGAATCCCTCTaGACATTCATCAATATCTTT | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGLNESL*TFINIF Trigger: AAAGATATTGATGAATGTGCAGAGGGATTCGTTGAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTTTATTCCGGAATAGCTaGATCAGCTTCTCACTCACA | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSLFRNS*ISFSLT Trigger: TGTGAGTGAGAAGCTGATCCAGCTATTCCGGAATAA...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCAAACTTTACAACATTaGCCAGAAATATGCACAGGA | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGQTLQH*PEICTG Trigger: TCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACTTGGTTAAAATCCGCTaGCCCTCAGCAAGAACTTTT | + |
Preference number: 4 (lower is better) Translates to: WASVFNSLKQKDAVDRCYLVKIR*PSARTF Trigger: AAAAGTTCTTGCTGAGGGCCAGCGGATTTTAACCAA...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTGTCCCTGGACTGTGTTaGTACAGATGGCATTTTTGT | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLVPGLC*YRWHFC Trigger: ACAAAAATGCCATCTGTACCAACACAGTCCAGGGAC...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTACAGTGGTACCACCCTaGAAGGTTAACGCAGCGGGA | + |
Preference number: 4 (lower is better) Translates to: AVIYHIASGFAKCYIQFVTVVPP*KVNAAG Trigger: TCCCGCTGCGTTAACCTTCCAGGGTGGTACCACTGT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTAGCTTCTCACTCACATaGGGGGCTGAGTGGATCTCT | + |
Preference number: 4 (lower is better) Translates to: AVIYHIASGFAKCYIQFVSFSLT*GAEWIS Trigger: AGAGATCCACTCAGCCCCTCATGTGAGTGAGAAGCT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR TCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTAAAAAGCCATGCTTTTaGTTACGTTGCCCAAGCCAT | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLKKPCF*LRCPSH Trigger: ATGGCTTGGGCAACGTAATCAAAAGCATGGCTTTTT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGATACATTTTGGTCTaGAAACTTTACAACATTGGC | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGRYILV*KLYNIG Trigger: GCCAATGTTGTAAAGTTTGCAGACCAAAATGTATCT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR GCA 90 bp | ATTGTGATTCATCACATAGAGTCGGTTTCATGTAGAGCACTCCATTTTCCCAAAAGGTACCTCCGTATCTaGAACCCTCTTCACAGAATG | + |
Preference number: 4 (lower is better) Translates to: IVIHHIESVSCRALHFPKRYLRI*NPLHRM Trigger: CATTCTGTGAAGAGGGTTGCAGATACGGAGGTACCT...TTTGGGAAAATGGAGTGCTCTACATGAAACCGACTCTATGTGATGAATCACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTCTCAGAATCCACACCTaGCCATTATGCTTCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: AVIYHIASGFAKCYIQFVLRIHT*PLCFSP Trigger: GGGGCTGAAGCATAATGGGCAGGTGTGGATTCTGAG...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTATGATCTTGCCATCTTaGATGATTCCTTTGAAAAAG | + |
Preference number: 4 (lower is better) Translates to: MSKVVKATQTPSSDGDFGMILPS*MIPLKK Trigger: CTTTTTCAAAGGAATCATCCAAGATGGCAAGATCAT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGTTTTGCAGTCATCTTaGCCAAAAGCTCTTGCAAAT | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSVLQSS*PKALAN Trigger: ATTTGCAAGAGCTTTTGGCCAAGATGACTGCAAAAC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTATTCCCGGCAGGTCTTaGTTAAAATCCGCTGGCCCT | + |
Preference number: 4 (lower is better) Translates to: AVIYHIASGFAKCYIQFVIPGRS*LKSAGP Trigger: AGGGCCAGCGGATTTTAACCAAGACCTGCCGGGAAT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTACCAAGTCTCGTCTCTaGATAATTCAGTTTTGCAGT | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLTKSRL*IIQFCS Trigger: ACTGCAAAACTGAATTATGCAGAGACGAGACTTGGT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGGATGTATCCTGGGATaGAGTCACAGCGATATAACC | + |
Preference number: 4 (lower is better) Translates to: LFVFMMLGMEARVVHILPGCILG*SHSDIT Trigger: GGTTATATCGCTGTGACTGCATCCCAGGATACATCC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACCAAACTTTACAACATTaGCCAGAAATATGCACAGGA | + |
Preference number: 4 (lower is better) Translates to: WASVFNSLKQKDAVDRCYQTLQH*PEICTG Trigger: TCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTG...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTTTGTATTCCAATTTTTaGATTCCGAGTTTTCTCCAC | + |
Preference number: 4 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSLYSNF*IPSFLH Trigger: GTGGAGAAAACTCGGAATGCAAAAATTGGAATACAA...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CCA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCTCAACATTTGGATTCTaGCAATCACAAGCTGTCCGC | + |
Preference number: 4 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVSTFGF*QSQAVR Trigger: GCGGACAGCTTGTGATTGCCAGAATCCAAATGTTGA...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CAA 72 bp | CAGAGTGGTAGCATGGCACTGACTTTAGTGACTGTATaGTACCTATTTGTTTTTATGATGTTGGGGATGGAA | + |
Preference number: 4 (lower is better) Translates to: QSGSMALTLVTV*YLFVFMMLGME Trigger: TTCCATCCCCAACATCATAAAAACAAATAGGTACAATACAGTCACTAAAGTCAGTGCCATGCTACCACTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTAGATACATTTTGGTCTaGAAACTTTACAACATTGGC | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLRYILV*KLYNIG Trigger: GCCAATGTTGTAAAGTTTGCAGACCAAAATGTATCT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTGATATCTTCACAGTATaGAGAGTTGCCCTGGACAGA | + |
Preference number: 4 (lower is better) Translates to: AVIYHIASGFAKCYIQFVDIFTV*RVALDR Trigger: TCTGTCCAGGGCAACTCTGCATACTGTGAAGATATC...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCACAGTAGTGCATCTTTaGTGCACACTCATCGATATC | + |
Preference number: 4 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVTVVHL*CTLIDI Trigger: GATATCGATGAGTGTGCAGCAAAGATGCACTACTGT...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATTATTCCGGAATAGCTaGATCAGCTTCTCACTCACA | + |
Preference number: 4 (lower is better) Translates to: LFVFMMLGMEARVVHILPLFRNS*ISFSLT Trigger: TGTGAGTGAGAAGCTGATCCAGCTATTCCGGAATAA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | GCATTGTTTGGGGCTGGAAAACTGTCTCATCTGTTAAGAGCATTTGCTGTTCTTATGATCTTGCCATCTTaGATGATTCCTTTGAAAAAG | + |
Preference number: 4 (lower is better) Translates to: ALFGAGKLSHLLRAFAVLMILPS*MIPLKK Trigger: CTTTTTCAAAGGAATCATCCAAGATGGCAAGATCAT...AAGAACAGCAAATGCTCTTAACAGATGAGACAGTTTTCCAGCCCCAAACAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | ATTGTGATTCATCACATAGAGTCGGTTTCATGTAGAGCACTCCATTTTCCCAAATGCATAATTCAGTTTTaGAGTCATCTTGGCCAAAAG | + |
Preference number: 4 (lower is better) Translates to: IVIHHIESVSCRALHFPKCIIQF*SHLGQK Trigger: CTTTTGGCCAAGATGACTGCAAAACTGAATTATGCA...TTTGGGAAAATGGAGTGCTCTACATGAAACCGACTCTATGTGATGAATCACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR GCA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTACCCTCTTCACAGAATaGTTTGCAGACAGTACCATT | + |
Preference number: 4 (lower is better) Translates to: AVIYHIASGFAKCYIQFVTLFTE*FADSTI Trigger: AATGGTACTGTCTGCAAAGCATTCTGTGAAGAGGGT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CCA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAATATCTTTCTCACAGTaGCTTCCTGTGAATCCAGAA | + |
Preference number: 4 (lower is better) Translates to: LFVFMMLGMEARVVHILPISFSQ*LPVNPE Trigger: TTCTGGATTCACAGGAAGCCACTGTGAGAAAGATAT...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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3UTR CAA 72 bp | CCTAAGAAGATCGAGTCATCAAATGTTACTCTTAACTaGTCATTAAGTAGCTACCATTTTTCTCTTGCAAAC | + |
Preference number: 4 (lower is better) Translates to: PKKIESSNVTLN*SLSSYHFSLAN Trigger: GTTTGCAAGAGAAAAATGGTAGCTACTTAATGACAAGTTAAGAGTAACATTTGATGACTCGATCTTCTTAGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS GCA 90 bp | AGGCGCTCACAGACAGCGCGACCTTGTGCCACTGTCCATCGGCCATaGGGTAGGGAAGGGCCTCAGTCCTGGGCTTGCCGCCATGGATGT | + |
Preference number: 5 (lower is better) Translates to: RRSQTARPCATVHRP*GREGPQSWACRHGC Trigger: ACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGTGGCACAAGGTCGCGCTGTCTGTGAGCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS GCA 90 bp | ACTGTCCATCGGCCATGCGGTAGGGAAGGGCCTCAGTCCTGGGCTTaGCGCCATGGATGTAATGATAGCGTATCTCTTCTCTTGGGCCAC | + |
Preference number: 5 (lower is better) Translates to: TVHRPCGREGPQSWA*RHGCNDSVSLLLGH Trigger: GTGGCCCAAGAGAAGAGATACGCTATCATTACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CCA 90 bp | TGTGCCACTGTCCATCGGCCATGCGGTAGGGAAGGGCCTCAGTCCTaGGCTTGCCGCCATGGATGTAATGATAGCGTATCTCTTCTCTTG | + |
Preference number: 5 (lower is better) Translates to: CATVHRPCGREGPQS*ACRHGCNDSVSLLL Trigger: CAAGAGAAGAGATACGCTATCATTACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGTGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS-3UTR CAA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAATCTACCCAGGAGTCTaGGTCCCTGTAGAGCAGCCC | + |
Preference number: 5 (lower is better) Translates to: QSVSKSASREQLTWEQSPIYPGV*VPVEQP Trigger: GGGCTGCTCTACAGGGACCAAGACTCCTGGGTAGAT...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS GCA 90 bp | CTTGCATTGACAGGTTGTACAGGGAGATCCAGCCATTGTCCACACTaGGCCGCTCAGCCTCGAAATACCAGAGCTGTCCAGGCAAGTTTT | + |
Preference number: 5 (lower is better) Translates to: LALTGCTGRSSHCPH*AAQPRNTRAVQASF Trigger: AAAACTTGCCTGGACAGCTCTGGTATTTCGAGGCTGAGCGGCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS TCA 90 bp | AACATTGGCCAGAAATATGCACAGGAAGTGAGTCTGGGGAACAGTTaGGTGGGGGACAGGACATCCTTCGGCACTCCACAGCACCACTTT | + |
Preference number: 5 (lower is better) Translates to: NIGQKYAQEVSLGNS*VGDRTSFGTPQHHF Trigger: AAAGTGGTGCTGTGGAGTGCCGAAGGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTGGCCAATGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS TCA 90 bp | GGATGTATCCTGGGATGCAGTCACAGCGATATAACCCCGGCAAGTTaGCACACACCGTGTTGGCATGACAGTAGTGCATCTTTGCTGCAC | + |
Preference number: 5 (lower is better) Translates to: GCILGCSHSDITPAS*HTPCWHDSSASLLH Trigger: GTGCAGCAAAGATGCACTACTGTCATGCCAACACGGTGTGTGTCAACTTGCCGGGGTTATATCGCTGTGACTGCATCCCAGGATACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS GCA 90 bp | AGCTCCCGGATCGACAGTATCACCCCTGAGGTGGACGGCTTCTGCTaGACTGTAGCCAAAAAGGTAAACTCACTCTTATTCCGGAATAGC | + |
Preference number: 5 (lower is better) Translates to: SSRIDSITPEVDGFC*TVAKKVNSLLFRNS Trigger: GCTATTCCGGAATAAGAGTGAGTTTACCTTTTTGGCTACAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCGATCCGGGAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS GCA 90 bp | TCCAGCTCCCGGATCGACAGTATCACCCCTGAGGTGGACGGCTTCTaGTGCACTGTAGCCAAAAAGGTAAACTCACTCTTATTCCGGAAT | + |
Preference number: 5 (lower is better) Translates to: SSSRIDSITPEVDGF*CTVAKKVNSLLFRN Trigger: ATTCCGGAATAAGAGTGAGTTTACCTTTTTGGCTACAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCGATCCGGGAGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTATCTACCCAGGAGTCTaGGTCCCTGTAGAGCAGCCC | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGIYPGV*VPVEQP Trigger: GGGCTGCTCTACAGGGACCAAGACTCCTGGGTAGAT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGAGTCTGGGGAACAGTaGAGTGGGGGACAGGACATC | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGESGEQ*SGGQDI Trigger: GATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCATTCCCGGCAGGTCTaGGTTAAAATCCGCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: RMSKVVKATQTPSSDGDFHSRQV*VKIRWP Trigger: GGGCCAGCGGATTTTAACCAAGACCTGCCGGGAATG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS TCA 90 bp | TGGTCTGCAAACTTTACAACATTGGCCAGAAATATGCACAGGAAGTaGGTCTGGGGAACAGTTGAGTGGGGGACAGGACATCCTTCGGCA | + |
Preference number: 5 (lower is better) Translates to: WSANFTTLARNMHRK*VWGTVEWGTGHPSA Trigger: TGCCGAAGGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTGCAGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
||
CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTGCCCAAGCCATAGATaGCTTCCTGGAGGAAGGTTG | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGCPSHR*LPGGRL Trigger: CAACCTTCCTCCAGGAAGCAATCTATGGCTTGGGCA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
||
CDS-3UTR CAA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGAGCAGCCCACTCACTaGGCAGGTCTTCTCACAGTG | + |
Preference number: 5 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSEQPTH*AGLLTV Trigger: CACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
||
CDS-3UTR CAA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAGCATTTTTGTCACAGTaGTGTTGTCCGCTGCCACAA | + |
Preference number: 5 (lower is better) Translates to: QSVSKSASREQLTWEQSPAFLSQ*CCPLPQ Trigger: TTGTGGCAGCGGACAACACAACTGTGACAAAAATGC...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCATGTCCCTGGACTGTGTaGGTACAGATGGCATTTTTG | + |
Preference number: 5 (lower is better) Translates to: QSVSKSASREQLTWEQSPCPWTV*VQMAFL Trigger: CAAAAATGCCATCTGTACCAACACAGTCCAGGGACA...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
||
CDS-3UTR CAA 90 bp | ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTACGCAGCGGGAGTGGTaGTGGCACTCAACGAATCCC | + |
Preference number: 5 (lower is better) Translates to: TASRPMQFDHVYSFSPNSTQREW*WHSTNP Trigger: GGGATTCGTTGAGTGCCACAACCACTCCCGCTGCGT...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
||
CDS TCA 90 bp | GAATATGATCCTTCTCTGAGCAGTTCAAAGGAGGGCAAGCTTCTGTaGTTTTTACCAAGACTCCACCTCGACATTCCCGGCAGGTCTTGG | + |
Preference number: 5 (lower is better) Translates to: EYDPSLSSSKEGKLL*FLPRLHLDIPGRSW Trigger: CCAAGACCTGCCGGGAATGTCGAGGTGGAGTCTTGGTAAAAATCACAGAAGCTTGCCCTCCTTTGAACTGCTCAGAGAAGGATCATATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
||
CDS GCA 90 bp | CAAGTTGACACACACCGTGTTGGCATGACAGTAGTGCATCTTTGCTaGACACTCATCGATATCTTCACAGTATGCAGAGTTGCCCTGGAC | + |
Preference number: 5 (lower is better) Translates to: QVDTHRVGMTVVHLC*TLIDIFTVCRVALD Trigger: GTCCAGGGCAACTCTGCATACTGTGAAGATATCGATGAGTGTGCAGCAAAGATGCACTACTGTCATGCCAACACGGTGTGTGTCAACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
||
CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTGGCAATTTTCCAGTaGACCAAGTCTCGTCTCTGC | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGVAIFQ*TKSRLC Trigger: GCAGAGACGAGACTTGGTCAACTGGAAAATTGCCAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGTGCAGTTCCTGCAGTaGTCACCATCTACCCAGGAG | + |
Preference number: 5 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSVQFLQ*SPSTQE Trigger: CTCCTGGGTAGATGGTGACAACTGCAGGAACTGCAC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
||
CDS-3UTR CAA 90 bp | CAATCAGTCAGTAAATCAGCAAGCAGGGAGCAGCTGACGTGGGAGCAATCACCAGTACAGATGGCATTTTaGTCACAGTTGTGTTGTCCG | + |
Preference number: 5 (lower is better) Translates to: QSVSKSASREQLTWEQSPVQMAF*SQLCCP Trigger: CGGACAACACAACTGTGACAAAAATGCCATCTGTAC...TGGTGATTGCTCCCACGTCAGCTGCTCCCTGCTTGCTGATTTACTGACTGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGAAGGACAGACACATTaGTTAGGGGCCACACAGGTA | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGEGQTH*LGATQV Trigger: TACCTGTGTGGCCCCTAACAAATGTGTCTGTCCTTC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
||
CDS-3UTR CAA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGAAGGACAGACACATTaGTTAGGGGCCACACAGGTA | + |
Preference number: 5 (lower is better) Translates to: RMSKVVKATQTPSSDGDFEGQTH*LGATQV Trigger: TACCTGTGTGGCCCCTAACAAATGTGTCTGTCCTTC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTCTTGCATTGACAGGTaGTACAGGGAGATCCAGCCA | + |
Preference number: 5 (lower is better) Translates to: RMSKVVKATQTPSSDGDFSCIDR*YREIQP Trigger: TGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS GCA 90 bp | ATTCCAATTTTTGCATTCCGAGTTTTCTCCACACTTAGGTGCTTCTaGACAGAAGTTATGACCTCGGCAGACCCTGCAGCACTGGTTCTC | + |
Preference number: 5 (lower is better) Translates to: IPIFAFRVFSTLRCF*TEVMTSADPAALVL Trigger: GAGAACCAGTGCTGCAGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAACTCGGAATGCAAAAATTGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTGTGCAGTTCCTGCAGTaGTCACCATCTACCCAGGAG | + |
Preference number: 5 (lower is better) Translates to: TASRPMQFDHVYSFSPNSVQFLQ*SPSTQE Trigger: CTCCTGGGTAGATGGTGACAACTGCAGGAACTGCAC...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTTTGTCACAGTTGTGTaGTCCGCTGCCACAATCATC | + |
Preference number: 5 (lower is better) Translates to: RMSKVVKATQTPSSDGDFFVTVV*SAATII Trigger: GATGATTGTGGCAGCGGACAACACAACTGTGACAAA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGCATTTTTGTCACAGTaGTGTTGTCCGCTGCCACAA | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGAFLSQ*CCPLPQ Trigger: TTGTGGCAGCGGACAACACAACTGTGACAAAAATGC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTTGTCCCTGGACTGTGTaGGTACAGATGGCATTTTTG | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGCPWTV*VQMAFL Trigger: CAAAAATGCCATCTGTACCAACACAGTCCAGGGACA...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTTCTCCCATTCTTGCATaGACAGGTTGTACAGGGAGA | + |
Preference number: 5 (lower is better) Translates to: RMSKVVKATQTPSSDGDFSPILA*TGCTGR Trigger: TCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGA...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CCA 90 bp | TTTGATTACGTTGCCCAAGCCATAGATTGCTTCCTGGAGGAAGGTTaGTCTCCGGAGGATCTATCACACGCTCATAAATCCTATTGCAGT | + |
Preference number: 5 (lower is better) Translates to: FDYVAQAIDCFLEEG*SPEDLSHAHKSYCS Trigger: ACTGCAATAGGATTTATGAGCGTGTGATAGATCCTCCGGAGACCAACCTTCCTCCAGGAAGCAATCTATGGCTTGGGCAACGTAATCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS-3UTR CAA 90 bp | GCAGAGATCTGGCTTCTATTCCCAGCACCCATGTGGCAGTTAACCAACATCTGTGAGATGTATCCATTCTaGCACTCACAAGTCGCTTTT | + |
Preference number: 5 (lower is better) Translates to: AEIWLLFPAPMWQLTNICEMYPF*HSQVAF Trigger: AAAAGCGACTTGTGAGTGCAAGAATGGATACATCTC...ACAGATGTTGGTTAACTGCCACATGGGTGCTGGGAATAGAAGCCAGATCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGACAGTAGTGCATCTTaGCTGCACACTCATCGATAT | + |
Preference number: 5 (lower is better) Translates to: RMSKVVKATQTPSSDGDFDSSAS*LHTHRY Trigger: ATATCGATGAGTGTGCAGCAAAGATGCACTACTGTC...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGTACAGATGGCATTTTaGTCACAGTTGTGTTGTCCG | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGVQMAF*SQLCCP Trigger: CGGACAACACAACTGTGACAAAAATGCCATCTGTAC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTTGGCCAAAAGCTCTaGCAAATCCATTATTCCTTG | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGLGQKL*QIHYSL Trigger: CAAGGAATAATGGATTTGCAAGAGCTTTTGGCCAAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTAGTTTTGCAGTCATCTaGGCCAAAAGCTCTTGCAAA | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGSFAVI*AKSSCK Trigger: TTTGCAAGAGCTTTTGGCCAAGATGACTGCAAAACT...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCGAGCAGCCCACTCACTaGGCAGGTCTTCTCACAGTG | + |
Preference number: 5 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVEQPTH*AGLLTV Trigger: CACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTC...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGAGTCTGGGGAACAGTaGAGTGGGGGACAGGACATC | + |
Preference number: 5 (lower is better) Translates to: LFVFMMLGMEARVVHILPESGEQ*SGGQDI Trigger: GATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCACATTCCCGGCAGGTCTaGGTTAAAATCCGCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: LFVFMMLGMEARVVHILPHSRQV*VKIRWP Trigger: GGGCCAGCGGATTTTAACCAAGACCTGCCGGGAATG...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS TCA 90 bp | TTTGCAGTCATCTTGGCCAAAAGCTCTTGCAAATCCATTATTCCTTaGACCAGGCTCAGGAAATCACTGCATGTTGGGCAAGTGCGATTT | + |
Preference number: 5 (lower is better) Translates to: FAVILAKSSCKSIIP*TRLRKSLHVGQVRF Trigger: AAATCGCACTTGCCCAACATGCAGTGATTTCCTGAGCCTGGTTCAAGGAATAATGGATTTGCAAGAGCTTTTGGCCAAGATGACTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTCTCTCTGTACATCTaGAAACAGAAATGCCTTACT | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGLSLYI*KQKCLT Trigger: AGTAAGGCATTTCTGTTTCAAGATGTACAGAGAGAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | ATTGTGATTCATCACATAGAGTCGGTTTCATGTAGAGCACTCCATTTTCCCAAATGCCCAAGCCATAGATaGCTTCCTGGAGGAAGGTTG | + |
Preference number: 5 (lower is better) Translates to: IVIHHIESVSCRALHFPKCPSHR*LPGGRL Trigger: CAACCTTCCTCCAGGAAGCAATCTATGGCTTGGGCA...TTTGGGAAAATGGAGTGCTCTACATGAAACCGACTCTATGTGATGAATCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTGCATAATTCAGTTTaGCAGTCATCTTGGCCAAAA | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGLHNSV*QSSWPK Trigger: TTTTGGCCAAGATGACTGCAAAACTGAATTATGCAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGACAGTAGTGCATCTTaGCTGCACACTCATCGATAT | + |
Preference number: 5 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSDSSAS*LHTHRY Trigger: ATATCGATGAGTGTGCAGCAAAGATGCACTACTGTC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS GCA 90 bp | GCTGGCCCTCAGCAAGAACTTTTCCTCCATAGATACATTTTGGTCTaGAAACTTTACAACATTGGCCAGAAATATGCACAGGAAGTGAGT | + |
Preference number: 5 (lower is better) Translates to: AGPQQELFLHRYILV*KLYNIGQKYAQEVS Trigger: ACTCACTTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTGCAGACCAAAATGTATCTATGGAGGAAAAGTTCTTGCTGAGGGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS GCA 90 bp | CTTCACAGTATGCAGAGTTGCCCTGGACAGAGATGTATCCATTCTTaGACTCACAAGTCGCTTTTGTATTCCAATTTTTGCATTCCGAGT | + |
Preference number: 5 (lower is better) Translates to: LHSMQSCPGQRCIHS*THKSLLYSNFCIPS Trigger: ACTCGGAATGCAAAAATTGGAATACAAAAGCGACTTGTGAGTGCAAGAATGGATACATCTCTGTCCAGGGCAACTCTGCATACTGTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTGATGATCTTGCCATCTaGGATGATTCCTTTGAAAAA | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGDDLAI*DDSFEK Trigger: TTTTTCAAAGGAATCATCCAAGATGGCAAGATCATC...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | AGGATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTCTCCATAGATACATTTaGGTCTGCAAACTTTACAAC | + |
Preference number: 5 (lower is better) Translates to: RMSKVVKATQTPSSDGDFLHRYI*VCKLYN Trigger: GTTGTAAAGTTTGCAGACCAAAATGTATCTATGGAG...AAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | ATGAGCAAAGTGGTAAAGGCAACCCAAACGCCTTCCTCTGATGGAGACTTTGGTCTCCATAGATACATTTaGGTCTGCAAACTTTACAAC | + |
Preference number: 5 (lower is better) Translates to: MSKVVKATQTPSSDGDFGLHRYI*VCKLYN Trigger: GTTGTAAAGTTTGCAGACCAAAATGTATCTATGGAG...ACCAAAGTCTCCATCAGAGGAAGGCGTTTGGGTTGCCTTTACCACTTTGCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTGAGATGTATCCATTCTaGCACTCACAAGTCGCTTTT | + |
Preference number: 5 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSEMYPF*HSQVAF Trigger: AAAAGCGACTTGTGAGTGCAAGAATGGATACATCTC...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | TGGGCATCTGTGTTCAACAGTTTGAAACAGAAAGATGCTGTGGACAGATGCTACCTGCATAATTCAGTTTaGCAGTCATCTTGGCCAAAA | + |
Preference number: 5 (lower is better) Translates to: WASVFNSLKQKDAVDRCYLHNSV*QSSWPK Trigger: TTTTGGCCAAGATGACTGCAAAACTGAATTATGCAG...GTAGCATCTGTCCACAGCATCTTTCTGTTTCAAACTGTTGAACACAGATGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | CCTCCTCTTCCTCAGGTTGGATGGTCATTTTGTCCATTTTCTCATGTGATGAGTAGAAAAGGTCAACATTaGGATTCTGGCAATCACAAG | + |
Preference number: 5 (lower is better) Translates to: PPLPQVGWSFCPFSHVMSRKGQH*DSGNHK Trigger: CTTGTGATTGCCAGAATCCAAATGTTGACCTTTTCT...ACTCATCACATGAGAAAATGGACAAAATGACCATCCAACCTGAGGAAGAGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS-3UTR CAA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATCTTGCATTGACAGGTaGTACAGGGAGATCCAGCCA | + |
Preference number: 5 (lower is better) Translates to: LFVFMMLGMEARVVHILPSCIDR*YREIQP Trigger: TGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | ACAGCCTCCAGACCAATGCAATTTGATCATGTTTATTCCTTCTCTCCCAACTCTCTCTCTCTGTACATCTaGAAACAGAAATGCCTTACT | + |
Preference number: 5 (lower is better) Translates to: TASRPMQFDHVYSFSPNSLSLYI*KQKCLT Trigger: AGTAAGGCATTTCTGTTTCAAGATGTACAGAGAGAG...AGAGTTGGGAGAGAAGGAATAAACATGATCAAATTGCATTGGTCTGGAGGCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
||
CDS-3UTR CAA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTGTGGCAATTTTCCAGTaGACCAAGTCTCGTCTCTGC | + |
Preference number: 5 (lower is better) Translates to: AVIYHIASGFAKCYIQFVVAIFQ*TKSRLC Trigger: GCAGAGACGAGACTTGGTCAACTGGAAAATTGCCAC...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATTTGTCACAGTTGTGTaGTCCGCTGCCACAATCATC | + |
Preference number: 5 (lower is better) Translates to: LFVFMMLGMEARVVHILPFVTVV*SAATII Trigger: GATGATTGTGGCAGCGGACAACACAACTGTGACAAA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCATCTCCCATTCTTGCATaGACAGGTTGTACAGGGAGA | + |
Preference number: 5 (lower is better) Translates to: LFVFMMLGMEARVVHILPSPILA*TGCTGR Trigger: TCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGA...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | CATTTTAACACTTTCCATTCAAAACCTACTGGACAAACACAACATTCTGAGGTCGAAAAAGCCATGCTTTaGATTACGTTGCCCAAGCCA | + |
Preference number: 5 (lower is better) Translates to: HFNTFHSKPTGQTQHSEVEKAML*ITLPKP Trigger: TGGCTTGGGCAACGTAATCAAAAGCATGGCTTTTTC...GACCTCAGAATGTTGTGTTTGTCCAGTAGGTTTTGAATGGAAAGTGTTAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCACTTGGCCAAAAGCTCTaGCAAATCCATTATTCCTTG | + |
Preference number: 5 (lower is better) Translates to: LFVFMMLGMEARVVHILPLGQKL*QIHYSL Trigger: CAAGGAATAATGGATTTGCAAGAGCTTTTGGCCAAG...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTAGTTTTGCAGTCATCTaGGCCAAAAGCTCTTGCAAA | + |
Preference number: 5 (lower is better) Translates to: AVIYHIASGFAKCYIQFVSFAVI*AKSSCK Trigger: TTTGCAAGAGCTTTTGGCCAAGATGACTGCAAAACT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | CTATTTGTTTTTATGATGTTGGGGATGGAAGCAAGGGTTGTACATATACTACCAGATGATCTTGCCATCTaGGATGATTCCTTTGAAAAA | + |
Preference number: 5 (lower is better) Translates to: LFVFMMLGMEARVVHILPDDLAI*DDSFEK Trigger: TTTTTCAAAGGAATCATCCAAGATGGCAAGATCATC...TGGTAGTATATGTACAACCCTTGCTTCCATCCCCAACATCATAAAAACAAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS-3UTR CAA 90 bp | GCTGTAATTTATCACATTGCATCGGGCTTTGCCAAGTGTTATATTCAATTTGTTAGAAAAGGTCAACATTaGGATTCTGGCAATCACAAG | + |
Preference number: 5 (lower is better) Translates to: AVIYHIASGFAKCYIQFVRKGQH*DSGNHK Trigger: CTTGTGATTGCCAGAATCCAAATGTTGACCTTTTCT...AACAAATTGAATATAACACTTGGCAAAGCCCGATGCAATGTGATAAATTACAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS GCA 72 bp | CAGACAGCGCGACCTTGTGCCACTGTCCATCGGCCATaGGGTAGGGAAGGGCCTCAGTCCTGGGCTTGCCGC | + |
Preference number: 6 (lower is better) Translates to: QTARPCATVHRP*GREGPQSWACR Trigger: GCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGACAGTGGCACAAGGTCGCGCTGTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS GCA 72 bp | GGCCAGCAGTCTGCCTCTCCTTCCAGACATCGGCACTaGTGGCAGCTGTGGGTCCAGTTGTCTCCACTTCGA | + |
Preference number: 6 (lower is better) Translates to: GQQSASPSRHRH*WQLWVQLSPLR Trigger: TCGAAGTGGAGACAACTGGACCCACAGCTGCCAGCAGTGCCGATGTCTGGAAGGAGAGGCAGACTGCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS GCA 72 bp | CGGCCATGCGGTAGGGAAGGGCCTCAGTCCTGGGCTTaGCGCCATGGATGTAATGATAGCGTATCTCTTCTC | + |
Preference number: 6 (lower is better) Translates to: RPCGREGPQSWA*RHGCNDSVSLL Trigger: GAGAAGAGATACGCTATCATTACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CCA 72 bp | GTCCATCGGCCATGCGGTAGGGAAGGGCCTCAGTCCTaGGCTTGCCGCCATGGATGTAATGATAGCGTATCT | + |
Preference number: 6 (lower is better) Translates to: VHRPCGREGPQS*ACRHGCNDSVS Trigger: AGATACGCTATCATTACATCCATGGCGGCAAGCCCAGGACTGAGGCCCTTCCCTACCGCATGGCCGATGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CAA 90 bp | CCAGATCCACAGAGCAGCAGACTCTCCCATTCTTGCATTGACAGGTaGTACAGGGAGATCCAGCCATTGTCCACACTGCGCCGCTCAGCC | + |
Preference number: 6 (lower is better) Translates to: PDPQSSRLSHSCIDR*YREIQPLSTLRRSA Trigger: GGCTGAGCGGCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCTGCTGCTCTGTGGATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS GCA 72 bp | ACAGGTTGTACAGGGAGATCCAGCCATTGTCCACACTaGGCCGCTCAGCCTCGAAATACCAGAGCTGTCCAG | + |
Preference number: 6 (lower is better) Translates to: TGCTGRSSHCPH*AAQPRNTRAVQ Trigger: CTGGACAGCTCTGGTATTTCGAGGCTGAGCGGCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CCA 72 bp | CAGTGGTACCACCCTGGAAGGTTAACGCAGCGGGAGTaGTTGTGGCACTCAACGAATCCCTCTGCACATTCA | + |
Preference number: 6 (lower is better) Translates to: QWYHPGRLTQRE*LWHSTNPSAHS Trigger: TGAATGTGCAGAGGGATTCGTTGAGTGCCACAACCACTCCCGCTGCGTTAACCTTCCAGGGTGGTACCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS CAA 90 bp | CTCTCCCATTCTTGCATTGACAGGTTGTACAGGGAGATCCAGCCATaGTCCACACTGCGCCGCTCAGCCTCGAAATACCAGAGCTGTCCA | + |
Preference number: 6 (lower is better) Translates to: LSHSCIDRLYREIQP*STLRRSASKYQSCP Trigger: TGGACAGCTCTGGTATTTCGAGGCTGAGCGGCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS TCA 72 bp | CAGAAATATGCACAGGAAGTGAGTCTGGGGAACAGTTaGGTGGGGGACAGGACATCCTTCGGCACTCCACAG | + |
Preference number: 6 (lower is better) Translates to: QKYAQEVSLGNS*VGDRTSFGTPQ Trigger: CTGTGGAGTGCCGAAGGATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS TCA 72 bp | CGGCAGACCCTGCAGCACTGGTTCTCCGGAAGAATATaGTCCTTCTCTGAGCAGTTCAAAGGAGGGCAAGCT | + |
Preference number: 6 (lower is better) Translates to: RQTLQHWFSGRI*SFSEQFKGGQA Trigger: AGCTTGCCCTCCTTTGAACTGCTCAGAGAAGGATCATATTCTTCCGGAGAACCAGTGCTGCAGGGTCTGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CAA 72 bp | CCAGGAGTCTTGGTCCCTGTAGAGCAGCCCACTCACTaGGCAGGTCTTCTCACAGTGGCAATTTTCCAGTTG | + |
Preference number: 6 (lower is better) Translates to: PGVLVPVEQPTH*AGLLTVAIFQL Trigger: CAACTGGAAAATTGCCACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTCTACAGGGACCAAGACTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CAA 72 bp | TGGTACCACCCTGGAAGGTTAACGCAGCGGGAGTGGTaGTGGCACTCAACGAATCCCTCTGCACATTCATCA | + |
Preference number: 6 (lower is better) Translates to: WYHPGRLTQREW*WHSTNPSAHSS Trigger: TGATGAATGTGCAGAGGGATTCGTTGAGTGCCACAACCACTCCCGCTGCGTTAACCTTCCAGGGTGGTACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS CAA 72 bp | CAGAGCAGCAGACTCTCCCATTCTTGCATTGACAGGTaGTACAGGGAGATCCAGCCATTGTCCACACTGCGC | + |
Preference number: 6 (lower is better) Translates to: QSSRLSHSCIDR*YREIQPLSTLR Trigger: GCGCAGTGTGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCTGCTGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CAA 90 bp | TTTGCATGTGCAGTTCCTGCAGTTGTCACCATCTACCCAGGAGTCTaGGTCCCTGTAGAGCAGCCCACTCACTTGGCAGGTCTTCTCACA | + |
Preference number: 6 (lower is better) Translates to: FACAVPAVVTIYPGV*VPVEQPTHLAGLLT Trigger: TGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTCTACAGGGACCAAGACTCCTGGGTAGATGGTGACAACTGCAGGAACTGCACATGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS TCA 72 bp | AGAAATGCCTTACTGGCATTGTGTAGTCCAGCCACCTaGGTGACGCCCAGGGTGGTGTTCACAAGGTCAAGT | + |
Preference number: 6 (lower is better) Translates to: RNALLALCSPAT*VTPRVVFTRSS Trigger: ACTTGACCTTGTGAACACCACCCTGGGCGTCACTCAGGTGGCTGGACTACACAATGCCAGTAAGGCATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS TCA 72 bp | TTTTCTCCACACTTAGGTGCTTCTGCACAGAAGTTATaGCCTCGGCAGACCCTGCAGCACTGGTTCTCCGGA | + |
Preference number: 6 (lower is better) Translates to: FSPHLGASAQKL*PRQTLQHWFSG Trigger: TCCGGAGAACCAGTGCTGCAGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS TCA 72 bp | CTGGGATGCAGTCACAGCGATATAACCCCGGCAAGTTaGCACACACCGTGTTGGCATGACAGTAGTGCATCT | + |
Preference number: 6 (lower is better) Translates to: LGCSHSDITPAS*HTPCWHDSSAS Trigger: AGATGCACTACTGTCATGCCAACACGGTGTGTGTCAACTTGCCGGGGTTATATCGCTGTGACTGCATCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CAA 90 bp | ACCATCTACCCAGGAGTCTTGGTCCCTGTAGAGCAGCCCACTCACTaGGCAGGTCTTCTCACAGTGGCAATTTTCCAGTTGACCAAGTCT | + |
Preference number: 6 (lower is better) Translates to: TIYPGVLVPVEQPTH*AGLLTVAIFQLTKS Trigger: AGACTTGGTCAACTGGAAAATTGCCACTGTGAGAAGACCTGCCAAGTGAGTGGGCTGCTCTACAGGGACCAAGACTCCTGGGTAGATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS TCA 72 bp | GTGTTCACAAGGTCAAGTTCAGTGATGATGTCCATCTaGAGGTCAGGGTCCATCCCAAAGCCCAGCACTGTC | + |
Preference number: 6 (lower is better) Translates to: VFTRSSSVMMSI*RSGSIPKPSTV Trigger: GACAGTGCTGGGCTTTGGGATGGACCCTGACCTTCAGATGGACATCATCACTGAACTTGACCTTGTGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS GCA 72 bp | GTGCTTCTGCACAGAAGTTATGACCTCGGCAGACCCTaGAGCACTGGTTCTCCGGAAGAATATGATCCTTCT | + |
Preference number: 6 (lower is better) Translates to: VLLHRSYDLGRP*STGSPEEYDPS Trigger: AGAAGGATCATATTCTTCCGGAGAACCAGTGCTGCAGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CCA 72 bp | TTACCAAGACTCCACCTCGACATTCCCGGCAGGTCTTaGTTAAAATCCGCTGGCCCTCAGCAAGAACTTTTC | + |
Preference number: 6 (lower is better) Translates to: LPRLHLDIPGRS*LKSAGPQQELF Trigger: GAAAAGTTCTTGCTGAGGGCCAGCGGATTTTAACCAAGACCTGCCGGGAATGTCGAGGTGGAGTCTTGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CCA 72 bp | TACCACCCTGGAAGGTTAACGCAGCGGGAGTGGTTGTaGCACTCAACGAATCCCTCTGCACATTCATCAATA | + |
Preference number: 6 (lower is better) Translates to: YHPGRLTQREWL*HSTNPSAHSSI Trigger: TATTGATGAATGTGCAGAGGGATTCGTTGAGTGCCACAACCACTCCCGCTGCGTTAACCTTCCAGGGTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081872.13 |
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CDS CAA 72 bp | AGGAAATCACTGCATGTTGGGCAAGTGCGATTTAGGTaGGGGCACTGTGTGATGAAGCCGTTCGGCATGAAG | + |
Preference number: 6 (lower is better) Translates to: RKSLHVGQVRFR*GHCVMKPFGMK Trigger: CTTCATGCCGAACGGCTTCATCACACAGTGCCCCAACCTAAATCGCACTTGCCCAACATGCAGTGATTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CAA 72 bp | CAGATCCACAGAGCAGCAGACTCTCCCATTCTTGCATaGACAGGTTGTACAGGGAGATCCAGCCATTGTCCA | + |
Preference number: 6 (lower is better) Translates to: QIHRAADSPILA*TGCTGRSSHCP Trigger: TGGACAATGGCTGGATCTCCCTGTACAACCTGTCAATGCAAGAATGGGAGAGTCTGCTGCTCTGTGGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS GCA 72 bp | TTTGCATTCCGAGTTTTCTCCACACTTAGGTGCTTCTaGACAGAAGTTATGACCTCGGCAGACCCTGCAGCA | + |
Preference number: 6 (lower is better) Translates to: FAFRVFSTLRCF*TEVMTSADPAA Trigger: TGCTGCAGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAACTCGGAATGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CAA 72 bp | TTTACCAAGACTCCACCTCGACATTCCCGGCAGGTCTaGGTTAAAATCCGCTGGCCCTCAGCAAGAACTTTT | + |
Preference number: 6 (lower is better) Translates to: FTKTPPRHSRQV*VKIRWPSARTF Trigger: AAAAGTTCTTGCTGAGGGCCAGCGGATTTTAACCAAGACCTGCCGGGAATGTCGAGGTGGAGTCTTGGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CAA 90 bp | CTGTGTCCCTGGACTGTGTTGGTACAGATGGCATTTTTGTCACAGTaGTGTTGTCCGCTGCCACAATCATCATGCTCCGTACAAGAGAAG | + |
Preference number: 6 (lower is better) Translates to: LCPWTVLVQMAFLSQ*CCPLPQSSCSVQEK Trigger: CTTCTCTTGTACGGAGCATGATGATTGTGGCAGCGGACAACACAACTGTGACAAAAATGCCATCTGTACCAACACAGTCCAGGGACACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS GCA 72 bp | ATCGACAGTATCACCCCTGAGGTGGACGGCTTCTGCTaGACTGTAGCCAAAAAGGTAAACTCACTCTTATTC | + |
Preference number: 6 (lower is better) Translates to: IDSITPEVDGFC*TVAKKVNSLLF Trigger: GAATAAGAGTGAGTTTACCTTTTTGGCTACAGTGCAGCAGAAGCCGTCCACCTCAGGGGTGATACTGTCGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CCA 72 bp | GCCGCCATGGATGTAATGATAGCGTATCTCTTCTCTTaGGCCACTGCTCTCCAGTTCAAAATAGCTGTGTTC | + |
Preference number: 6 (lower is better) Translates to: AAMDVMIAYLFS*ATALQFKIAVF Trigger: GAACACAGCTATTTTGAACTGGAGAGCAGTGGCCCAAGAGAAGAGATACGCTATCATTACATCCATGGCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS TCA 72 bp | AACTTTACAACATTGGCCAGAAATATGCACAGGAAGTaGGTCTGGGGAACAGTTGAGTGGGGGACAGGACAT | + |
Preference number: 6 (lower is better) Translates to: NFTTLARNMHRK*VWGTVEWGTGH Trigger: ATGTCCTGTCCCCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS GCA 72 bp | CCAATTTTTGCATTCCGAGTTTTCTCCACACTTAGGTaGTTCTGCACAGAAGTTATGACCTCGGCAGACCCT | + |
Preference number: 6 (lower is better) Translates to: PIFAFRVFSTLR*FCTEVMTSADP Trigger: AGGGTCTGCCGAGGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAACTCGGAATGCAAAAATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS GCA 72 bp | GACACACACCGTGTTGGCATGACAGTAGTGCATCTTTaGTGCACACTCATCGATATCTTCACAGTATGCAGA | + |
Preference number: 6 (lower is better) Translates to: DTHRVGMTVVHL*CTLIDIFTVCR Trigger: TCTGCATACTGTGAAGATATCGATGAGTGTGCAGCAAAGATGCACTACTGTCATGCCAACACGGTGTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CAA 72 bp | TGCCGCCATGGATGTAATGATAGCGTATCTCTTCTCTaGGGCCACTGCTCTCCAGTTCAAAATAGCTGTGTT | + |
Preference number: 6 (lower is better) Translates to: CRHGCNDSVSLL*GHCSPVQNSCV Trigger: AACACAGCTATTTTGAACTGGAGAGCAGTGGCCCAAGAGAAGAGATACGCTATCATTACATCCATGGCGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CAA 72 bp | GCTGCACACTCATCGATATCTTCACAGTATGCAGAGTaGCCCTGGACAGAGATGTATCCATTCTTGCACTCA | + |
Preference number: 6 (lower is better) Translates to: AAHSSISSQYAE*PWTEMYPFLHS Trigger: TGAGTGCAAGAATGGATACATCTCTGTCCAGGGCAACTCTGCATACTGTGAAGATATCGATGAGTGTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CAA 72 bp | TGGACTGTGTTGGTACAGATGGCATTTTTGTCACAGTaGTGTTGTCCGCTGCCACAATCATCATGCTCCGTA | + |
Preference number: 6 (lower is better) Translates to: WTVLVQMAFLSQ*CCPLPQSSCSV Trigger: TACGGAGCATGATGATTGTGGCAGCGGACAACACAACTGTGACAAAAATGCCATCTGTACCAACACAGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS GCA 72 bp | TTTGGTCTGCAAACTTTACAACATTGGCCAGAAATATaGACAGGAAGTGAGTCTGGGGAACAGTTGAGTGGG | + |
Preference number: 6 (lower is better) Translates to: FGLQTLQHWPEI*TGSESGEQLSG Trigger: CCCACTCAACTGTTCCCCAGACTCACTTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTGCAGACCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS GCA 72 bp | ACACACCGTGTTGGCATGACAGTAGTGCATCTTTGCTaGACACTCATCGATATCTTCACAGTATGCAGAGTT | + |
Preference number: 6 (lower is better) Translates to: THRVGMTVVHLC*TLIDIFTVCRV Trigger: AACTCTGCATACTGTGAAGATATCGATGAGTGTGCAGCAAAGATGCACTACTGTCATGCCAACACGGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS GCA 72 bp | TACAGATGGCATTTTTGTCACAGTTGTGTTGTCCGCTaGCACAATCATCATGCTCCGTACAAGAGAAGTCAT | + |
Preference number: 6 (lower is better) Translates to: YRWHFCHSCVVR*HNHHAPYKRSH Trigger: ATGACTTCTCTTGTACGGAGCATGATGATTGTGGCAGCGGACAACACAACTGTGACAAAAATGCCATCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS GCA 72 bp | TTTGCATTCCGAGTTTTCTCCACACTTAGGTGCTTCTaGACAGAAGTTATGACTTTTGCAGTCATCTTGGCC | + |
Preference number: 6 (lower is better) Translates to: FAFRVFSTLRCF*TEVMTFAVILA Trigger: GGCCAAGATGACTGCAAAAGTCATAACTTCTGTGCAGAAGCACCTAAGTGTGGAGAAAACTCGGAATGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151721.8 |
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CDS CAA 90 bp | TCTTCACAGTATGCAGAGTTGCCCTGGACAGAGATGTATCCATTCTaGCACTCACAAGTCGCTTTTGTATTCCAATTTTTGCATTCCGAG | + |
Preference number: 6 (lower is better) Translates to: SSQYAELPWTEMYPF*HSQVAFVFQFLHSE Trigger: CTCGGAATGCAAAAATTGGAATACAAAAGCGACTTGTGAGTGCAAGAATGGATACATCTCTGTCCAGGGCAACTCTGCATACTGTGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS TCA 72 bp | CCATCTTGGATGATTCCTTTGAAAAAGCCATGCTTTTaGTTACGTTGCCCAAGCCATAGATTGCTTCCTGGA | + |
Preference number: 6 (lower is better) Translates to: PSWMIPLKKPCF*LRCPSHRLLPG Trigger: TCCAGGAAGCAATCTATGGCTTGGGCAACGTAATCAAAAGCATGGCTTTTTCAAAGGAATCATCCAAGATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |
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CDS CAA 90 bp | AAATCCGCTGGCCCTCAGCAAGAACTTTTCCTCCATAGATACATTTaGGTCTGCAAACTTTACAACATTGGCCAGAAATATGCACAGGAA | + |
Preference number: 6 (lower is better) Translates to: KSAGPQQELFLHRYI*VCKLYNIGQKYAQE Trigger: TTCCTGTGCATATTTCTGGCCAATGTTGTAAAGTTTGCAGACCAAAATGTATCTATGGAGGAAAAGTTCTTGCTGAGGGCCAGCGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 |
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CDS CAA 72 bp | TATGCAGAGTTGCCCTGGACAGAGATGTATCCATTCTaGCACTCACAAGTCGCTTTTGTATTCCAATTTTTG | + |
Preference number: 6 (lower is better) Translates to: YAELPWTEMYPF*HSQVAFVFQFL Trigger: CAAAAATTGGAATACAAAAGCGACTTGTGAGTGCAAGAATGGATACATCTCTGTCCAGGGCAACTCTGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081872.13 ENSMUST00000107603.2 ENSMUST00000151721.8 |