Pregenerated sensors for NELFE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024369Ensembl transcript IDs: ENSMUST00000097343.11, ENSMUST00000165953.3, ENSMUST00000173065.8, ENSMUST00000173357.8
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGTTACTGAGACCAGCTTaGGGGCATATGAGGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: GLTPIPSAERLEADGGEKLLRPA*GHMRHK Trigger: CTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA...CTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| 3UTR-3UTR CCA 90 bp | CTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGTTACTGAGACCAGCTTaGGGGCATATGAGGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: LTAAFEGLTPIPSAERLELLRPA*GHMRHK Trigger: CTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA...CTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| 3UTR-3UTR CAA 90 bp | CCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGCTTCTACCCTTTACTGAGACCAGCTaGGGGGCATATGAGGCACAA | + |
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Preference number: 3 (lower is better) Translates to: PIPSAERLEADGGEKLLPFTETS*GAYEAQ Trigger: TTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA...GGGTAGAAGCTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGTTTACTGAGACCAGCTaGGGGGCATATGAGGCACAA | + |
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Preference number: 3 (lower is better) Translates to: GLTPIPSAERLEADGGEKFTETS*GAYEAQ Trigger: TTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA...CTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| CDS-3UTR GCA 90 bp | TTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCCATGACTTCGGTCCCTaGTGCGGCTTCGGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRPAWGHMRHKESSFMSHDFGP*CGFGEG Trigger: CCCCTCCCCGAAGCCGCAGCAGGGACCGAAGTCATG...GGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR GCA 90 bp | AGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCATGACTTCGGTCCCTaGTGCGGCTTCGGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGAYEAQGIQLHVLEAIHDFGP*CGFGEG Trigger: CCCCTCCCCGAAGCCGCAGCAGGGACCGAAGTCATG...GATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | ACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCCTCCTCTGGAACGGCTaGAAAGTGGGGACAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLGAYEAQGIQLHVLEALLWNG*KVGTGP Trigger: GGGGCCTGTCCCCACTTTCCAGCCGTTCCAGAGGAG...GGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | TTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCGTCAAAGCCTCGAGGTaGGCCATCACCAGCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRPAWGHMRHKESSFMSVKASR*AITSPG Trigger: CCCGGGGCTGGTGATGGCCCACCTCGAGGCTTTGAC...GGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | ATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGCTTCTACCCCAGCCCCGCGGAGGAGGGTaGGCGTCATGTCCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPSAERLEADGGEKLLPQPRGGG*ASCPLH Trigger: ATGGAGAGGACATGACGCCCACCCTCCTCCGCGGGG...CTGGGGTAGAAGCTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| CDS-3UTR CCA 90 bp | GGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGCCCCGCGGAGGAGGGTaGGCGTCATGTCCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GAYEAQGIQLHVLEAIHKPRGGG*ASCPLH Trigger: ATGGAGAGGACATGACGCCCACCCTCCTCCGCGGGG...CTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR GCA 90 bp | ACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCAGCCCCGGGGGCCTCTaGTTCTTCTCCATCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLGAYEAQGIQLHVLEASPGGL*FFSILS Trigger: GGACAAGATGGAGAAGAAGCAGAGGCCCCCGGGGCT...GGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTACTCCTCTGGAACGGCTaGAAAGTGGGGACAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TETSLGAYEAQGIQLHVLLLWNG*KVGTGP Trigger: GGGGCCTGTCCCCACTTTCCAGCCGTTCCAGAGGAG...TAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR GCA 90 bp | GGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGAGCCCCGGGGGCCTCTaGTTCTTCTCCATCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GAYEAQGIQLHVLEAIHKSPGGL*FFSILS Trigger: GGACAAGATGGAGAAGAAGCAGAGGCCCCCGGGGCT...CTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR GCA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTCATGACTTCGGTCCCTaGTGCGGCTTCGGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVHDFGP*CGFGEG Trigger: CCCCTCCCCGAAGCCGCAGCAGGGACCGAAGTCATG...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | TTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCGGAACGGCTGGAAAGTaGGGACAGGCCCCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRPAWGHMRHKESSFMSGTAGK*GQAPSL Trigger: CAGAGAAGGGGCCTGTCCCCACTTTCCAGCCGTTCC...GGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | CTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGTCAAAGCCTCGAGGTaGGCCATCACCAGCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTAAFEGLTPIPSAERLEVKASR*AITSPG Trigger: CCCGGGGCTGGTGATGGCCCACCTCGAGGCTTTGAC...CTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| CDS-3UTR CCA 90 bp | TTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACCCCTTAGGGCTGTTCTaGACAGCAAGGGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGAYEAQGIQLHVLEAIHPLGLF*TAREPQ Trigger: CTGGGGCTCCCTTGCTGTCCAGAACAGCCCTAAGGG...GTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR GCA 90 bp | GGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGGGCCGCTGCTGCTCTaGTTCTTCAGAGCCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GAYEAQGIQLHVLEAIHKGPLLL*FFRASN Trigger: ATTGCTGGCTCTGAAGAAGCAGAGCAGCAGCGGCCC...CTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | TTTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCGGAACGGCTGGAAAGTaGGGACAGGCCCCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTETSLGAYEAQGIQLHVGTAGK*GQAPSL Trigger: CAGAGAAGGGGCCTGTCCCCACTTTCCAGCCGTTCC...GACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | TTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCGCAGACATGCTCCTCTaGAACGGCTGGAAAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRPAWGHMRHKESSFMSADMLL*NGWKVG Trigger: CCCCACTTTCCAGCCGTTCCAGAGGAGCATGTCTGC...GGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | GAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCAGACATGCTCCTCTaGAACGGCTGGAAAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETSLGAYEAQGIQLHVLEADMLL*NGWKVG Trigger: CCCCACTTTCCAGCCGTTCCAGAGGAGCATGTCTGC...TTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTATCCTCTGGGGACGTCTaGATGGCTCCTGTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TETSLGAYEAQGIQLHVLSSGDV*MAPVGP Trigger: AGGACCTACAGGAGCCATCCAGACGTCCCCAGAGGA...TAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | TTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTCCTCTGGGGACGTCTaGATGGCTCCTGTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRPAWGHMRHKESSFMSSSGDV*MAPVGP Trigger: AGGACCTACAGGAGCCATCCAGACGTCCCCAGAGGA...GGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | GAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAATCCTCTGGGGACGTCTaGATGGCTCCTGTAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: ETSLGAYEAQGIQLHVLESSGDV*MAPVGP Trigger: AGGACCTACAGGAGCCATCCAGACGTCCCCAGAGGA...TTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | TCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGAGTCAAAGCCTCGAGGTaGGCCATCACCAGCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: STLTAAFEGLTPIPSAERVKASR*AITSPG Trigger: CCCGGGGCTGGTGATGGCCCACCTCGAGGCTTTGAC...TCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| CDS-3UTR CCA 90 bp | GTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCCCGCGGAGGAGGGTaGGCGTCATGTCCTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: VHWLTSTLTAAFEGLTPIPRGGG*ASCPLH Trigger: ATGGAGAGGACATGACGCCCACCCTCCTCCGCGGGG...GATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| CDS-3UTR CCA 90 bp | GGCGTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCACCCTTAGGGCTGTTCTaGACAGCAAGGGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVHWLTSTLTAAFEGLTPPLGLF*TAREPQ Trigger: CTGGGGCTCCCTTGCTGTCCAGAACAGCCCTAAGGG...TGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCACGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| CDS-3UTR TCA 90 bp | GGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGGCACTGATGGCTCCTaGCTTCACCAGTTGTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GAYEAQGIQLHVLEAIHKGTDGS*LHQLFG Trigger: GCCAAACAACTGGTGAAGTCAGGAGCCATCAGTGCC...CTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR GCA 90 bp | GGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGGGGCCGCTGCTGCTCTaGTTCTTCAGAGCCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLTPIPSAERLEADGGEKGPLLL*FFRASN Trigger: ATTGCTGGCTCTGAAGAAGCAGAGCAGCAGCGGCCC...CTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| CDS-3UTR GCA 90 bp | TTTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCGGGCCGCTGCTGCTCTaGTTCTTCAGAGCCAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: FTETSLGAYEAQGIQLHVGPLLL*FFRASN Trigger: ATTGCTGGCTCTGAAGAAGCAGAGCAGCAGCGGCCC...GACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR GCA 90 bp | AGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCGTGTCCACCACAGGCTaGTCTGACAGTGAGCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLGAYEAQGIQLHVLEAIVSTTG*SDSERL Trigger: CAAACGCTCACTGTCAGAGCAGCCTGTGGTGGACAC...GATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR GCA 90 bp | TTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCGTGTCCACCACAGGCTaGTCTGACAGTGAGCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LLRPAWGHMRHKESSFMSVSTTG*SDSERL Trigger: CAAACGCTCACTGTCAGAGCAGCCTGTGGTGGACAC...GGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | GGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGCCTGTTCTGTTGCTGTaGCAGTGTCCACCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GAYEAQGIQLHVLEAIHKPVLLL*QCPPQA Trigger: AGCCTGTGGTGGACACTGCCACAGCAACAGAACAGG...CTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGGCACAGTTTCTGGGTaGGTCCATGGAGAGGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: TETSLGAYEAQGIQLHVLGTVSG*VHGEVD Trigger: ATCGACCTCTCCATGGACCCACCCAGAAACTGTGCC...TAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTACGAAGGCACAGTTTCTaGGTGGGTCCATGGAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: TETSLGAYEAQGIQLHVLRRHSF*VGPWRG Trigger: ACCTCTCCATGGACCCACCCAGAAACTGTGCCTTCG...TAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR TCA 90 bp | GGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGGGCACTGATGGCTCCTaGCTTCACCAGTTGTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GLTPIPSAERLEADGGEKGTDGS*LHQLFG Trigger: GCCAAACAACTGGTGAAGTCAGGAGCCATCAGTGCC...CTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| CDS-3UTR TCA 90 bp | TTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCCCATCTTCTCGTAGGTaGCGAAGGCACAGTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLRPAWGHMRHKESSFMSPSSRR*RRHSFW Trigger: CCAGAAACTGTGCCTTCGTCACCTACGAGAAGATGG...GGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR TCA 90 bp | AGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCAGCTCAGCAACAGCCTaGTCTGCAGACTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGAYEAQGIQLHVLEAISSATA*SADSIF Trigger: GAAGATGGAGTCTGCAGATCAGGCTGTTGCTGAGCT...GATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR TCA 90 bp | TTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAGCTCAGCAACAGCCTaGTCTGCAGACTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGAYEAQGIQLHVLEAIHSSATA*SADSIF Trigger: GAAGATGGAGTCTGCAGATCAGGCTGTTGCTGAGCT...GTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR GCA 90 bp | GGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGGTGTCCACCACAGGCTaGTCTGACAGTGAGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLTPIPSAERLEADGGEKVSTTG*SDSERL Trigger: CAAACGCTCACTGTCAGAGCAGCCTGTGGTGGACAC...CTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
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| CDS-3UTR CCA 90 bp | TTTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCCTGTTCTGTTGCTGTaGCAGTGTCCACCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTETSLGAYEAQGIQLHVPVLLL*QCPPQA Trigger: AGCCTGTGGTGGACACTGCCACAGCAACAGAACAGG...GACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS-3UTR CCA 90 bp | TCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGAGGAACGGCTGGAAAGTaGGGACAGGCCCCTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: STLTAAFEGLTPIPSAERGTAGK*GQAPSL Trigger: CAGAGAAGGGGCCTGTCCCCACTTTCCAGCCGTTCC...TCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CCA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTGCAGACATGCTCCTCTaGAACGGCTGGAAAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVADMLL*NGWKVG Trigger: CCCCACTTTCCAGCCGTTCCAGAGGAGCATGTCTGC...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGTACAGAGATTTCCTCTaGGGACGTCTGGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAYEAQGIQLHVLEAIHKYRDFL*GRLDGS Trigger: GGAGCCATCCAGACGTCCCCAGAGGAAATCTCTGTA...CTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CCA 90 bp | GAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAATACAGAGATTTCCTCTaGGGACGTCTGGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETSLGAYEAQGIQLHVLEYRDFL*GRLDGS Trigger: GGAGCCATCCAGACGTCCCCAGAGGAAATCTCTGTA...TTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCGGCACAGTTTCTGGGTaGGTCCATGGAGAGGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTETSLGAYEAQGIQLHVGTVSG*VHGEVD Trigger: ATCGACCTCTCCATGGACCCACCCAGAAACTGTGCC...GACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGCGAAGGCACAGTTTCTaGGTGGGTCCATGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLTPIPSAERLEADGGEKRRHSF*VGPWRG Trigger: ACCTCTCCATGGACCCACCCAGAAACTGTGCCTTCG...CTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACGTCCTCTTGTCTCGATaGCAACCCTTAGGGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGAYEAQGIQLHVLEAIHVLLSR*QPLGLF Trigger: GAACAGCCCTAAGGGTTGCCATCGAGACAAGAGGAC...GTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR TCA 90 bp | GGCGTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCACCATCTTCTCGTAGGTaGCGAAGGCACAGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVHWLTSTLTAAFEGLTPPSSRR*RRHSFW Trigger: CCAGAAACTGTGCCTTCGTCACCTACGAGAAGATGG...TGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR TCA 90 bp | TTTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCAGCTCAGCAACAGCCTaGTCTGCAGACTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTETSLGAYEAQGIQLHVSSATA*SADSIF Trigger: GAAGATGGAGTCTGCAGATCAGGCTGTTGCTGAGCT...GACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCGAACTTCTTCTGCAGTaGCTCTTCCTCTTCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSLGAYEAQGIQLHVLEAELLLQ*LFLFTQ Trigger: CTGAGTGAAGAGGAAGAGGCACTGCAGAAGAAGTTC...GGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCAGCAACAGCCTGATCTaGAGACTCCATCTTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSLGAYEAQGIQLHVLEASNSLI*RLHLLV Trigger: TACGAGAAGATGGAGTCTGCAGATCAGGCTGTTGCT...GGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CCA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTCGAAGGCACAGTTTCTaGGTGGGTCCATGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVRRHSF*VGPWRG Trigger: ACCTCTCCATGGACCCACCCAGAAACTGTGCCTTCG...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCTCACTGTACACAATCTaGGTCCTCTTGTCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLGAYEAQGIQLHVLEASLYTI*VLLSRW Trigger: CCATCGAGACAAGAGGACCCAGATTGTGTACAGTGA...GGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR TCA 90 bp | TTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGCTTGGCACTGATGGCTCCTaGCTTCACCAGTTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPIPSAERLEADGGEKLGTDGS*LHQLFG Trigger: GCCAAACAACTGGTGAAGTCAGGAGCCATCAGTGCC...AAGCTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR GCA 90 bp | GAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAAGCAACAGCCTGATCTaGAGACTCCATCTTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETSLGAYEAQGIQLHVLESNSLI*RLHLLV Trigger: TACGAGAAGATGGAGTCTGCAGATCAGGCTGTTGCT...TTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CCA 90 bp | TTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGCTTCCTGTTCTGTTGCTGTaGCAGTGTCCACCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPIPSAERLEADGGEKLPVLLL*QCPPQA Trigger: AGCCTGTGGTGGACACTGCCACAGCAACAGAACAGG...AAGCTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CCA 90 bp | ATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGCTTCTACCCCAGACTTCACCAGTTGTTTaGCCTGTTCTGTTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSAERLEADGGEKLLPQTSPVV*PVLLLW Trigger: CCACAGCAACAGAACAGGCCAAACAACTGGTGAAGT...CTGGGGTAGAAGCTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CCA 90 bp | CTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGTACAGAGATTTCCTCTaGGGACGTCTGGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTAAFEGLTPIPSAERLEYRDFL*GRLDGS Trigger: GGAGCCATCCAGACGTCCCCAGAGGAAATCTCTGTA...CTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CCA 90 bp | TCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGAGGCACAGTTTCTGGGTaGGTCCATGGAGAGGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: STLTAAFEGLTPIPSAERGTVSG*VHGEVD Trigger: ATCGACCTCTCCATGGACCCACCCAGAAACTGTGCC...TCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCTCACTGTACACAATCTaGGTCCTCTTGTCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGAYEAQGIQLHVLEAISLYTI*VLLSRW Trigger: CCATCGAGACAAGAGGACCCAGATTGTGTACAGTGA...GATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCCATGGAGAGGTCGATaGTATTTCCAAAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTETSLGAYEAQGIQLHVPWRGR*YFQRER Trigger: TCTCTCCCTTTGGAAATATCATCGACCTCTCCATGG...GACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR TCA 90 bp | TCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGACCATCTTCTCGTAGGTaGCGAAGGCACAGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STLTAAFEGLTPIPSAERPSSRR*RRHSFW Trigger: CCAGAAACTGTGCCTTCGTCACCTACGAGAAGATGG...TCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR GCA 90 bp | GGCGTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAGAACTTCTTCTGCAGTaGCTCTTCCTCTTCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVHWLTSTLTAAFEGLTPELLLQ*LFLFTQ Trigger: CTGAGTGAAGAGGAAGAGGCACTGCAGAAGAAGTTC...TGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CCA 90 bp | TCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGAGTCCTCTTGTCTCGATaGCAACCCTTAGGGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: STLTAAFEGLTPIPSAERVLLSR*QPLGLF Trigger: GAACAGCCCTAAGGGTTGCCATCGAGACAAGAGGAC...TCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAGAACGTTTGAAGCCTaGGTTCTTAGTTTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGAYEAQGIQLHVLEAIHRTFEA*VLSFSL Trigger: AAGGCTGAAACTAAGAACTCAGGCTTCAAACGTTCT...GTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR TCA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTCCATGGAGAGGTCGATaGTATTTCCAAAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVPWRGR*YFQRER Trigger: TCTCTCCCTTTGGAAATATCATCGACCTCTCCATGG...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR GCA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTGAACTTCTTCTGCAGTaGCTCTTCCTCTTCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVELLLQ*LFLFTQ Trigger: CTGAGTGAAGAGGAAGAGGCACTGCAGAAGAAGTTC...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR GCA 90 bp | GAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAATTGTTGAACTTCTTCTaGAGTGCCTCTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETSLGAYEAQGIQLHVLELLNFF*SASSSS Trigger: TGAAGAGGAAGAGGCACTGCAGAAGAAGTTCAACAA...TTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR GCA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTAGCAACAGCCTGATCTaGAGACTCCATCTTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVSNSLI*RLHLLV Trigger: TACGAGAAGATGGAGTCTGCAGATCAGGCTGTTGCT...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR GCA 90 bp | GGCGTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATGTTGACTTTAAGCTaGACAGATTCCACCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVHWLTSTLTAAFEGLTPMLTLS*TDSTWV Trigger: GACCCAGGTGGAATCTGTGCAGCTTAAAGTCAACAT...TGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCACGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGATGTTGACTTTAAGCTaGACAGATTCCACCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLTPIPSAERLEADGGEKMLTLS*TDSTWV Trigger: GACCCAGGTGGAATCTGTGCAGCTTAAAGTCAACAT...CTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CCA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTTCACTGTACACAATCTaGGTCCTCTTGTCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVSLYTI*VLLSRW Trigger: CCATCGAGACAAGAGGACCCAGATTGTGTACAGTGA...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR TCA 90 bp | TCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGACCATGGAGAGGTCGATaGTATTTCCAAAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: STLTAAFEGLTPIPSAERPWRGR*YFQRER Trigger: TCTCTCCCTTTGGAAATATCATCGACCTCTCCATGG...TCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR GCA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTATGTTGACTTTAAGCTaGACAGATTCCACCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVMLTLS*TDSTWV Trigger: GACCCAGGTGGAATCTGTGCAGCTTAAAGTCAACAT...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCACTTCACCAGTTGTTTaGCCTGTTCTGTTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHWLTSTLTAAFEGLTPITSPVV*PVLLLW Trigger: CCACAGCAACAGAACAGGCCAAACAACTGGTGAAGT...GATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR TCA 90 bp | GTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCAGAACGTTTGAAGCCTaGGTTCTTAGTTTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHWLTSTLTAAFEGLTPIRTFEA*VLSFSL Trigger: AAGGCTGAAACTAAGAACTCAGGCTTCAAACGTTCT...GATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR GCA 90 bp | TCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGATTGTTGAACTTCTTCTaGAGTGCCTCTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STLTAAFEGLTPIPSAERLLNFF*SASSSS Trigger: TGAAGAGGAAGAGGCACTGCAGAAGAAGTTCAACAA...TCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS TCA 90 bp | CCGGTCATGACTTCGGTCCCTGCTGCGGCTTCGGGGAGGGGAGGCTaGGGAGCGGGCGCTACCATGCTCTTCATAGCTCCAGTCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVMTSVPAAASGRGG*GAGATMLFIAPVKA Trigger: GGCTTTGACTGGAGCTATGAAGAGCATGGTAGCGCCCGCTCCTCAGCCTCCCCTCCCCGAAGCCGCAGCAGGGACCGAAGTCATGACCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS TCA 90 bp | TCTCTGTCTCTCTCTTTGTCCCGATCCCTATCTCGGCTCCGGTCATaGCTTCGGTCCCTGCTGCGGCTTCGGGGAGGGGAGGCTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLSRSLSRLRS*LRSLLRLRGGEAEE Trigger: CTCCTCAGCCTCCCCTCCCCGAAGCCGCAGCAGGGACCGAAGTCATGACCGGAGCCGAGATAGGGATCGGGACAAAGAGAGAGACAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CCA 90 bp | GCGGGCGCTACCATGCTCTTCATAGCTCCAGTCAAAGCCTCGAGGTaGGCCATCACCAGCCCCGGGGGCCTCTGCTTCTTCTCCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGATMLFIAPVKASR*AITSPGGLCFFSIL Trigger: CAAGATGGAGAAGAAGCAGAGGCCCCCGGGGCTGGTGATGGCCCACCTCGAGGCTTTGACTGGAGCTATGAAGAGCATGGTAGCGCCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS GCA 90 bp | CCAGTCAAAGCCTCGAGGTGGGCCATCACCAGCCCCGGGGGCCTCTaGTTCTTCTCCATCTTGTCCCAGTTCCCGAAGCCGATCACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVKASRWAITSPGGL*FFSILSQFPKPITR Trigger: TCTAGTGATCGGCTTCGGGAACTGGGACAAGATGGAGAAGAAGCAGAGGCCCCCGGGGCTGGTGATGGCCCACCTCGAGGCTTTGACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CCA 90 bp | CGTCTGGATGGCTCCTGTAGGTCCTCATCAGCAGACATGCTCCTCTaGAACGGCTGGAAAGTGGGGACAGGCCCCTTCTCTGGGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLDGSCRSSSADMLL*NGWKVGTGPFSGSF Trigger: AAAGGACCCAGAGAAGGGGCCTGTCCCCACTTTCCAGCCGTTCCAGAGGAGCATGTCTGCTGATGAGGACCTACAGGAGCCATCCAGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CCA 90 bp | GTAGGTCCTCATCAGCAGACATGCTCCTCTGGAACGGCTGGAAAGTaGGGACAGGCCCCTTCTCTGGGTCCTTTAACTTCCCTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGPHQQTCSSGTAGK*GQAPSLGPLTSLPG Trigger: CCCTGGAAGGGAAGTTAAAGGACCCAGAGAAGGGGCCTGTCCCCACTTTCCAGCCGTTCCAGAGGAGCATGTCTGCTGATGAGGACCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CCA 90 bp | GGCTCCTGTAGGTCCTCATCAGCAGACATGCTCCTCTGGAACGGCTaGAAAGTGGGGACAGGCCCCTTCTCTGGGTCCTTTAACTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSCRSSSADMLLWNG*KVGTGPFSGSFNFP Trigger: AGGGAAGTTAAAGGACCCAGAGAAGGGGCCTGTCCCCACTTTCCAGCCGTTCCAGAGGAGCATGTCTGCTGATGAGGACCTACAGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS GCA 90 bp | AGTGAGCGTTTGACACCGCCCTGGCTCGCTGGGCCGCTGCTGCTCTaGTTCTTCAGAGCCAGCAATGCCTTTTTCTTCTTCTTGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SERLTPPWLAGPLLL*FFRASNAFFFFLSL Trigger: CAAACTCAAGAAGAAGAAAAAGGCATTGCTGGCTCTGAAGAAGCAGAGCAGCAGCGGCCCAGCGAGCCAGGGCGGTGTCAAACGCTCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCTGCTTCTTCTCCATCTaGTCCCAGTTCCCGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TSLGAYEAQGIQLHVLEACFFSI*SQFPKP Trigger: CGGCTTCGGGAACTGGGACAAGATGGAGAAGAAGCA...GGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAGAGCCCCAGACAGATTaGCCAGTAGCAGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVHWLTSTLTAAFEGLTPEPQTD*PVAASS Trigger: GCTGGACGCTGCTACTGGCAAATCTGTCTGGGGCTC...TGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCACGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CAA 90 bp | ACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTATGCTTCTTCTCCATCTaGTCCCAGTTCCCGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TETSLGAYEAQGIQLHVLCFFSI*SQFPKP Trigger: CGGCTTCGGGAACTGGGACAAGATGGAGAAGAAGCA...TAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTGAGCCCCAGACAGATTaGCCAGTAGCAGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVEPQTD*PVAASS Trigger: GCTGGACGCTGCTACTGGCAAATCTGTCTGGGGCTC...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCTCTCTGTCTCTCTCTTaGTCCCGATCCCTATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGAYEAQGIQLHVLEAISLSLS*SRSLSR Trigger: CCGAGATAGGGATCGGGACAAAGAGAGAGACAGAGA...GATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | TTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTCTCTGTCTCTCTCTTaGTCCCGATCCCTATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLRPAWGHMRHKESSFMSSLSLS*SRSLSR Trigger: CCGAGATAGGGATCGGGACAAAGAGAGAGACAGAGA...GGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | TTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTCCCGGTCTCTGTCTTaGTCTTTATCCCGGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRPAWGHMRHKESSFMSSRSLS*SLSRSL Trigger: CAGAGACCGGGATAAAGACAAAGACAGAGACCGGGA...GGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | GTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCGAGCCCCAGACAGATTaGCCAGTAGCAGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHWLTSTLTAAFEGLTPIEPQTD*PVAASS Trigger: GCTGGACGCTGCTACTGGCAAATCTGTCTGGGGCTC...GATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CAA 90 bp | TTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACGACTTCACCAGTTGTTaGGCCTGTTCTGTTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGAYEAQGIQLHVLEAIHDFTSC*ACSVAV Trigger: CACAGCAACAGAACAGGCCAAACAACTGGTGAAGTC...GTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | CTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGTGCTTCTTCTCCATCTaGTCCCAGTTCCCGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LTAAFEGLTPIPSAERLECFFSI*SQFPKP Trigger: CGGCTTCGGGAACTGGGACAAGATGGAGAAGAAGCA...CTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CAA 90 bp | TTTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCTCCCGGTCTCTGTCTTaGTCTTTATCCCGGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FTETSLGAYEAQGIQLHVSRSLS*SLSRSL Trigger: CAGAGACCGGGATAAAGACAAAGACAGAGACCGGGA...GACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACACAATCTGGGTCCTCTaGTCTCGATGGCAACCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LGAYEAQGIQLHVLEAIHTIWVL*SRWQPL Trigger: TAAGGGTTGCCATCGAGACAAGAGGACCCAGATTGT...GTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAAGGGTCCGAGAACGTTaGAAGCCTGAGTTCTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TETSLGAYEAQGIQLHVLRVRER*KPEFLV Trigger: AACTAAGAACTCAGGCTTCAAACGTTCTCGGACCCT...TAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | TTTACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCACAATCTGGGTCCTCTaGTCTCGATGGCAACCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: FTETSLGAYEAQGIQLHVTIWVL*SRWQPL Trigger: TAAGGGTTGCCATCGAGACAAGAGGACCCAGATTGT...GACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | GTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCTCTCTGTCTCTCTCTTaGTCCCGATCCCTATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VHWLTSTLTAAFEGLTPISLSLS*SRSLSR Trigger: CCGAGATAGGGATCGGGACAAAGAGAGAGACAGAGA...GATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CAA 90 bp | TCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGATCCCGGTCTCTGTCTTaGTCTTTATCCCGGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: STLTAAFEGLTPIPSAERSRSLS*SLSRSL Trigger: CAGAGACCGGGATAAAGACAAAGACAGAGACCGGGA...TCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CAA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTACAATCTGGGTCCTCTaGTCTCGATGGCAACCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVTIWVL*SRWQPL Trigger: TAAGGGTTGCCATCGAGACAAGAGGACCCAGATTGT...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | GAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAATTCTTCTTGAGTTTGTaGAACTTCTTCTGCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ETSLGAYEAQGIQLHVLEFFLSL*NFFCSA Trigger: GGCACTGCAGAAGAAGTTCAACAAACTCAAGAAGAA...TTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTATTCTTCTTGAGTTTGTaGAACTTCTTCTGCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TETSLGAYEAQGIQLHVLFFLSL*NFFCSA Trigger: GGCACTGCAGAAGAAGTTCAACAAACTCAAGAAGAA...TAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | TTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTGACGGAGGTGAAAAGCTTGACTTCACCAGTTGTTaGGCCTGTTCTGTTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTPIPSAERLEADGGEKLDFTSC*ACSVAV Trigger: CACAGCAACAGAACAGGCCAAACAACTGGTGAAGTC...AAGCTTTTCACCTCCGTCAGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CAA 90 bp | GCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAAGCCATCCACAAGGTTAGGGTCCGAGAACGTTaGAAGCCTGAGTTCTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AYEAQGIQLHVLEAIHKVRVRER*KPEFLV Trigger: AACTAAGAACTCAGGCTTCAAACGTTCTCGGACCCT...AACCTTGTGGATGGCTTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | GAGACCAGCTTGGGGGCATATGAGGCACAAGGAATCCAGCTTCATGTCCTAGAATGTTTTCGGGCTATGTaGACTTTAAGCTGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ETSLGAYEAQGIQLHVLECFRAM*TLSCTD Trigger: ATCTGTGCAGCTTAAAGTCAACATAGCCCGAAAACA...TTCTAGGACATGAAGCTGGATTCCTTGTGCCTCATATGCCCCCAAGCTGGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS-3UTR CAA 90 bp | GTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCTTCTTAGTTTCAGCCTaGATGGCACTGATGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VHWLTSTLTAAFEGLTPIFLVSA*MALMAP Trigger: AGGAGCCATCAGTGCCATCAAGGCTGAAACTAAGAA...GATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CAA 90 bp | GTGCACTGGTTAACATCAACACTGACAGCCGCTTTTGAAGGCTTAACTCCAATCAGGGTCCGAGAACGTTaGAAGCCTGAGTTCTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VHWLTSTLTAAFEGLTPIRVRER*KPEFLV Trigger: AACTAAGAACTCAGGCTTCAAACGTTCTCGGACCCT...GATTGGAGTTAAGCCTTCAAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCCGCTTTTGAAGGCTTAACTCCAATCCCAAGTGCTGAAAGACTAGAGGCTTGTTTTCGGGCTATGTaGACTTTAAGCTGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TAAFEGLTPIPSAERLEACFRAM*TLSCTD Trigger: ATCTGTGCAGCTTAAAGTCAACATAGCCCGAAAACA...AGCCTCTAGTCTTTCAGCACTTGGGATTGGAGTTAAGCCTTCAAAAGCGGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTGGGGTAAGGGCGTGCACTGGTTAACATCAACACTGACAGCCGCTTTTTGTTTTCGGGCTATGTaGACTTTAAGCTGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SFWGKGVHWLTSTLTAAFCFRAM*TLSCTD Trigger: ATCTGTGCAGCTTAAAGTCAACATAGCCCGAAAACA...AAAAGCGGCTGTCAGTGTTGATGTTAACCAGTGCACGCCCTTACCCCAAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 |
||
| CDS GCA 72 bp | GATCCCTATCTCGGCTCCGGTCATGACTTCGGTCCCTaGTGCGGCTTCGGGGAGGGGAGGCTGAGGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: DPYLGSGHDFGP*CGFGEGRLRSG Trigger: CCCGCTCCTCAGCCTCCCCTCCCCGAAGCCGCAGCAGGGACCGAAGTCATGACCGGAGCCGAGATAGGGATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CAA 72 bp | GCAGTGTCCACCACAGGCTGCTCTGACAGTGAGCGTTaGACACCGCCCTGGCTCGCTGGGCCGCTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVSTTGCSDSER*TPPWLAGPLLL Trigger: GAGCAGCAGCGGCCCAGCGAGCCAGGGCGGTGTCAAACGCTCACTGTCAGAGCAGCCTGTGGTGGACACTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS TCA 72 bp | CAGTGTCCACCACAGGCTGCTCTGACAGTGAGCGTTTaGCACCGCCCTGGCTCGCTGGGCCGCTGCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QCPPQAALTVSV*HRPGSLGRCCS Trigger: AGAGCAGCAGCGGCCCAGCGAGCCAGGGCGGTGTCAAACGCTCACTGTCAGAGCAGCCTGTGGTGGACACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS TCA 72 bp | ACTTCGGTCCCTGCTGCGGCTTCGGGGAGGGGAGGCTaGGGAGCGGGCGCTACCATGCTCTTCATAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSVPAAASGRGG*GAGATMLFIAP Trigger: TGGAGCTATGAAGAGCATGGTAGCGCCCGCTCCTCAGCCTCCCCTCCCCGAAGCCGCAGCAGGGACCGAAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CCA 72 bp | ACCATGCTCTTCATAGCTCCAGTCAAAGCCTCGAGGTaGGCCATCACCAGCCCCGGGGGCCTCTGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TMLFIAPVKASR*AITSPGGLCFF Trigger: GAAGAAGCAGAGGCCCCCGGGGCTGGTGATGGCCCACCTCGAGGCTTTGACTGGAGCTATGAAGAGCATGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CCA 72 bp | GGCTCCTGTAGGTCCTCATCAGCAGACATGCTCCTCTaGAACGGCTGGAAAGTGGGGACAGGCCCCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSCRSSSADMLL*NGWKVGTGPFS Trigger: AGAGAAGGGGCCTGTCCCCACTTTCCAGCCGTTCCAGAGGAGCATGTCTGCTGATGAGGACCTACAGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CAA 90 bp | AGGTGGGCCATCACCAGCCCCGGGGGCCTCTGCTTCTTCTCCATCTaGTCCCAGTTCCCGAAGCCGATCACTAGAAGACACAAAGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RWAITSPGGLCFFSI*SQFPKPITRRHKAF Trigger: GAAAGCTTTGTGTCTTCTAGTGATCGGCTTCGGGAACTGGGACAAGATGGAGAAGAAGCAGAGGCCCCCGGGGCTGGTGATGGCCCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS GCA 72 bp | TTGACACCGCCCTGGCTCGCTGGGCCGCTGCTGCTCTaGTTCTTCAGAGCCAGCAATGCCTTTTTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTPPWLAGPLLL*FFRASNAFFFF Trigger: GAAGAAGAAAAAGGCATTGCTGGCTCTGAAGAAGCAGAGCAGCAGCGGCCCAGCGAGCCAGGGCGGTGTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CCA 72 bp | AGGTCCTCATCAGCAGACATGCTCCTCTGGAACGGCTaGAAAGTGGGGACAGGCCCCTTCTCTGGGTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RSSSADMLLWNG*KVGTGPFSGSF Trigger: AAAGGACCCAGAGAAGGGGCCTGTCCCCACTTTCCAGCCGTTCCAGAGGAGCATGTCTGCTGATGAGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS TCA 72 bp | AGGCACAGTTTCTGGGTGGGTCCATGGAGAGGTCGATaGTATTTCCAAAGGGAGAGAAGGCCCCGCGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RHSFWVGPWRGR*YFQRERRPRGG Trigger: TCCTCCGCGGGGCCTTCTCTCCCTTTGGAAATATCATCGACCTCTCCATGGACCCACCCAGAAACTGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS CCA 72 bp | CATCAGCAGACATGCTCCTCTGGAACGGCTGGAAAGTaGGGACAGGCCCCTTCTCTGGGTCCTTTAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HQQTCSSGTAGK*GQAPSLGPLTS Trigger: GGAAGTTAAAGGACCCAGAGAAGGGGCCTGTCCCCACTTTCCAGCCGTTCCAGAGGAGCATGTCTGCTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS GCA 72 bp | CACCTGGGTCCCATTGAGCTCAGCAACAGCCTGATCTaGAGACTCCATCTTCTCGTAGGTGACGAAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: HLGPIELSNSLI*RLHLLVGDEGT Trigger: TGTGCCTTCGTCACCTACGAGAAGATGGAGTCTGCAGATCAGGCTGTTGCTGAGCTCAATGGGACCCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS CCA 72 bp | CTGACTTCACCAGTTGTTTGGCCTGTTCTGTTGCTGTaGCAGTGTCCACCACAGGCTGCTCTGACAGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTSPVVWPVLLL*QCPPQAALTVS Trigger: GCTCACTGTCAGAGCAGCCTGTGGTGGACACTGCCACAGCAACAGAACAGGCCAAACAACTGGTGAAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
||
| CDS CCA 72 bp | TATTTCCAAAGGGAGAGAAGGCCCCGCGGAGGAGGGTaGGCGTCATGTCCTCTCCATACACATACAGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: YFQRERRPRGGG*ASCPLHTHTVC Trigger: ACACACTGTATGTGTATGGAGAGGACATGACGCCCACCCTCCTCCGCGGGGCCTTCTCTCCCTTTGGAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
||
| CDS TCA 72 bp | CAACAGCCTGATCTGCAGACTCCATCTTCTCGTAGGTaGCGAAGGCACAGTTTCTGGGTGGGTCCATGGAGA | + |
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Preference number: 6 (lower is better) Translates to: QQPDLQTPSSRR*RRHSFWVGPWR Trigger: TCTCCATGGACCCACCCAGAAACTGTGCCTTCGTCACCTACGAGAAGATGGAGTCTGCAGATCAGGCTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS CCA 72 bp | TCGTCACTGTACACAATCTGGGTCCTCTTGTCTCGATaGCAACCCTTAGGGCTGTTCTGGACAGCAAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSLYTIWVLLSR*QPLGLFWTARE Trigger: CTCCCTTGCTGTCCAGAACAGCCCTAAGGGTTGCCATCGAGACAAGAGGACCCAGATTGTGTACAGTGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS CAA 72 bp | GTAGCAGCGTCCAGCATGGGCTGTTTTCGGGCTATGTaGACTTTAAGCTGCACAGATTCCACCTGGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VAASSMGCFRAM*TLSCTDSTWVP Trigger: TGGGACCCAGGTGGAATCTGTGCAGCTTAAAGTCAACATAGCCCGAAAACAGCCCATGCTGGACGCTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS CAA 90 bp | GATTTGCCAGTAGCAGCGTCCAGCATGGGCTGTTTTCGGGCTATGTaGACTTTAAGCTGCACAGATTCCACCTGGGTCCCATTGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: DLPVAASSMGCFRAM*TLSCTDSTWVPLSS Trigger: TGAGCTCAATGGGACCCAGGTGGAATCTGTGCAGCTTAAAGTCAACATAGCCCGAAAACAGCCCATGCTGGACGCTGCTACTGGCAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS CAA 90 bp | TCCAGGGTCCGAGAACGTTTGAAGCCTGAGTTCTTAGTTTCAGCCTaGATGGCACTGATGGCTCCTGACTTCACCAGTTGTTTGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SRVRERLKPEFLVSA*MALMAPDFTSCLAC Trigger: ACAGGCCAAACAACTGGTGAAGTCAGGAGCCATCAGTGCCATCAAGGCTGAAACTAAGAACTCAGGCTTCAAACGTTCTCGGACCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
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| CDS GCA 72 bp | AGCATGGGCTGTTTTCGGGCTATGTTGACTTTAAGCTaGACAGATTCCACCTGGGTCCCATTGAGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SMGCFRAMLTLS*TDSTWVPLSSA Trigger: TGCTGAGCTCAATGGGACCCAGGTGGAATCTGTGCAGCTTAAAGTCAACATAGCCCGAAAACAGCCCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173357.8 |
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| CDS CCA 72 bp | CAAAGCTTTCATACAGAGATTTCCTCTGGGGACGTCTaGATGGCTCCTGTAGGTCCTCATCAGCAGACATGC | + |
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Preference number: 6 (lower is better) Translates to: QSFHTEISSGDV*MAPVGPHQQTC Trigger: GCATGTCTGCTGATGAGGACCTACAGGAGCCATCCAGACGTCCCCAGAGGAAATCTCTGTATGAAAGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
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| CDS GCA 72 bp | GCCTTTTTCTTCTTCTTGAGTTTGTTGAACTTCTTCTaGAGTGCCTCTTCCTCTTCACTCAGCCCCGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: AFFFFLSLLNFF*SASSSSLSPGG Trigger: ACCTCCGGGGCTGAGTGAAGAGGAAGAGGCACTGCAGAAGAAGTTCAACAAACTCAAGAAGAAGAAAAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
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| CDS GCA 72 bp | TTTCTTCTTCTTGAGTTTGTTGAACTTCTTCTGCAGTaGCTCTTCCTCTTCACTCAGCCCCGGAGGTATCAC | + |
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Preference number: 6 (lower is better) Translates to: FLLLEFVELLLQ*LFLFTQPRRYH Trigger: GTGATACCTCCGGGGCTGAGTGAAGAGGAAGAGGCACTGCAGAAGAAGTTCAACAAACTCAAGAAGAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097343.11 ENSMUST00000165953.3 ENSMUST00000173065.8 ENSMUST00000173357.8 |
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