Pregenerated sensors for NELFB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013465Ensembl transcript IDs: ENSMUST00000059849.15, ENSMUST00000124900.2, ENSMUST00000140934.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGGAGCTACAGGGCAGAGCTCTGCCTACAGATCTCAGTTAGCATaGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: QGATGQSSAYRSQLA*TQSALTSAGSGLLQ Trigger: CTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAACTGAGATCTGTAGGCAGAGCTCTGCCCTGTAGCTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR GCA 90 bp | CTGCTGCAGACTCTCCCCCAGCTTCTGTGGAGGGTACCACTCCTGTaGTTGGGGATCAGGTCCAGCAAATCTACTTTGGTGAACCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: LLQTLPQLLWRVPLL*LGIRSSKSTLVNLA Trigger: TGCTAGGTTCACCAAAGTAGATTTGCTGGACCTGATCCCCAAGCACAGGAGTGGTACCCTCCACAGAAGCTGGGGGAGAGTCTGCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR TCA 90 bp | AAATCTACTTTGGTGAACCTAGCATACCTTGGACTTTGTGCAGATTaGATATCAGGTCAGTCAGGCCTCTGCCCACTGCTTTTCCTATAT | + |
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Preference number: 1 (lower is better) Translates to: KSTLVNLAYLGLCAD*ISGQSGLCPLLFLY Trigger: ATATAGGAAAAGCAGTGGGCAGAGGCCTGACTGACCTGATATTCAATCTGCACAAAGTCCAAGGTATGCTAGGTTCACCAAAGTAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR-3UTR GCA 90 bp | GTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGACGAGGAGGGAGAACCTTaGCAAAGAACACCCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VSMDSVSTDISRLRPAADEEGEP*QRTPLS Trigger: TGAGAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTC...GTCTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR-3UTR GCA 90 bp | CAGTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGATACCTTGGACTTTGTaGAGATTGAATATCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QLAWTQSALTSAGSGLLQIPWTL*RLNIRS Trigger: TGACCTGATATTCAATCTGCACAAAGTCCAAGGTAT...CTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR-3UTR GCA 90 bp | CCCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAAGGGTACCACTCCTGTaGTTGGGGATCAGGTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PYSKAKTHSWGRICFVLQRVPLL*LGIRSS Trigger: GCTGGACCTGATCCCCAAGCACAGGAGTGGTACCCT...TTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR-3UTR TCA 90 bp | CCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAAATGCAAGTAGACCACTaGGGGAGGACCTTTTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PTQRLKHIAGEGFALYCKMQVDH*GRTFWD Trigger: GTCCCAAAAGGTCCTCCCTCAGTGGTCTACTTGCAT...TTTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR-3UTR GCA 90 bp | CCCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAACAGGCCTCTGCCCACTaGTTTTCCTATATCCCAATC | + |
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Preference number: 2 (lower is better) Translates to: PYSKAKTHSWGRICFVLQQASAH*FSYIPI Trigger: GATTGGGATATAGGAAAAGCAGTGGGCAGAGGCCTG...TTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR-3UTR GCA 90 bp | CCCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAATACAGGGCAGAGCTCTaGCTACAGATCTCAGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: PYSKAKTHSWGRICFVLQYRAEL*LQISVS Trigger: GCTAACTGAGATCTGTAGGCAGAGCTCTGCCCTGTA...TTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR-3UTR TCA 90 bp | CCCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAGGACTTTGTGCAGATTaGATATCAGGTCAGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PYSKAKTHSWGRICFVLQGLCAD*ISGQSG Trigger: GCCTGACTGACCTGATATTCAATCTGCACAAAGTCC...TTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR-3UTR CCA 90 bp | CCCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAGAACCTAGCATACCTTaGACTTTGTGCAGATTGAAT | + |
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Preference number: 2 (lower is better) Translates to: PYSKAKTHSWGRICFVLQEPSIP*TLCRLN Trigger: ATTCAATCTGCACAAAGTCCAAGGTATGCTAGGTTC...TTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR CCA 72 bp | GGCTCAGGCCTGCTGCAGACTCTCCCCCAGCTTCTGTaGAGGGTACCACTCCTGTGCTTGGGGATCAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GSGLLQTLPQLL*RVPLLCLGIRS Trigger: GGACCTGATCCCCAAGCACAGGAGTGGTACCCTCCACAGAAGCTGGGGGAGAGTCTGCAGCAGGCCTGAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR-3UTR CAA 90 bp | TATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCAAGAGGAGGGAGAACCTaGCCAAAGAACACCCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: YPNHHPPLPGSSRGQVPPRGGRT*PKNTPL Trigger: GAGAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCT...TGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR GCA 72 bp | ACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTaGCAAAGAACACCCCTCTCAGCTCAGCCTACACCC | + |
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Preference number: 3 (lower is better) Translates to: TSSWEKLEEGEP*QRTPLSAQPTP Trigger: GGGTGTAGGCTGAGCTGAGAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR GCA 72 bp | ACTCTCCCCCAGCTTCTGTGGAGGGTACCACTCCTGTaGTTGGGGATCAGGTCCAGCAAATCTACTTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: TLPQLLWRVPLL*LGIRSSKSTLV Trigger: CACCAAAGTAGATTTGCTGGACCTGATCCCCAAGCACAGGAGTGGTACCCTCCACAGAAGCTGGGGGAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR GCA 72 bp | CAGATTGAATATCAGGTCAGTCAGGCCTCTGCCCACTaGTTTTCCTATATCCCAATCACCATCCACCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: QIEYQVSQASAH*FSYIPITIHLC Trigger: GCAGAGGTGGATGGTGATTGGGATATAGGAAAAGCAGTGGGCAGAGGCCTGACTGACCTGATATTCAATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR TCA 72 bp | TTGGTGAACCTAGCATACCTTGGACTTTGTGCAGATTaGATATCAGGTCAGTCAGGCCTCTGCCCACTGCTT | + |
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Preference number: 3 (lower is better) Translates to: LVNLAYLGLCAD*ISGQSGLCPLL Trigger: AAGCAGTGGGCAGAGGCCTGACTGACCTGATATTCAATCTGCACAAAGTCCAAGGTATGCTAGGTTCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| 3UTR GCA 72 bp | ATCTACTTTGGTGAACCTAGCATACCTTGGACTTTGTaGAGATTGAATATCAGGTCAGTCAGGCCTCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: IYFGEPSIPWTL*RLNIRSVRPLP Trigger: GGGCAGAGGCCTGACTGACCTGATATTCAATCTGCACAAAGTCCAAGGTATGCTAGGTTCACCAAAGTAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | CAGTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGGGAGCCCCGCGAACATaGCGGAGGCTCCGGCGGACG | + |
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Preference number: 4 (lower is better) Translates to: QLAWTQSALTSAGSGLLQGAPRT*RRLRRT Trigger: CGTCCGCCGGAGCCTCCGCCATGTTCGCGGGGCTCC...CTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | CAGTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGGCCACGCCCAGGTCCTaGAGCCCCGCGAACATGGCG | + |
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Preference number: 4 (lower is better) Translates to: QLAWTQSALTSAGSGLLQATPRS*SPANMA Trigger: CGCCATGTTCGCGGGGCTCCAGGACCTGGGCGTGGC...CTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | CAGTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGCCACCACGAGGGACATaGGCATCGGCAGGAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: QLAWTQSALTSAGSGLLQPPRGT*ASAGTW Trigger: CCAAGTTCCTGCCGATGCTCATGTCCCTCGTGGTGG...CTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | TATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATCCGCAGGAACAGTGTaGGCAGGAACTGCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: YPNHHPPLPGSSRGQVPPSAGTV*AGTAAP Trigger: TGGTGCTGCAGTTCCTGCGCACACTGTTCCTGCGGA...TGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | TATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCAGGGGCCACTCTTGCATaGAAGTGGAGGAGAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: YPNHHPPLPGSSRGQVPPGATLA*KWRRSL Trigger: GAGGCTTCTCCTCCACTTGCATGCAAGAGTGGCCCC...TGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | ACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCTGCACCACCTCTCCTTaGCGCCGGGTCTTGGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TSSWEKLEEGEPCQRTPLCTTSP*RRVLGE Trigger: TTCCCCCAAGACCCGGCGCCAAGGAGAGGTGGTGCA...GAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | TCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGGTGTGTTGGGGTATGTaGCTGAGGCTTTCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SQSPSTSARVKQGPSPTMVCWGM*LRLSPQ Trigger: CTGAGGAGAAAGCCTCAGTCACATACCCCAACACAC...CATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | TCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGCTTGTACCTCTCCTCTaGCTTTCCCTCAGAGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: SQSPSTSARVKQGPSPTMLVPLL*LSLRGN Trigger: ATTGCCTCTGAGGGAAAGGCAGAGGAGAGGTACAAG...CATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | CCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGACCTTGGTGATGAGCTCTaGCTCCATCTTAGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PITIHLCQGQAGAKSHHDLGDEL*LHLRLL Trigger: AAGGAGCCTAAGATGGAGGCAGAGCTCATCACCAAG...GTCATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | TATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCAGCCATGCGCTGCTCCTaGAGAAACTTGGTGAAACTC | + |
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Preference number: 4 (lower is better) Translates to: YPNHHPPLPGSSRGQVPPAMRCS*RNLVKL Trigger: GAGTTTCACCAAGTTTCTGCAGGAGCAGCGCATGGC...TGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | TTTTGGGACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACTCAGGTCCTCGCCATTaGCCACGCCCAGGTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: FWDQLLGETRGGRTLPKNSGPRH*PRPGPG Trigger: TCCAGGACCTGGGCGTGGCCAATGGCGAGGACCTGA...GTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGTCCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | TATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCAAGTAGTGCACATTCCTaGTCCGCAGGAACAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: YPNHHPPLPGSSRGQVPPSSAHS*SAGTVC Trigger: GCACACTGTTCCTGCGGACCAGGAATGTGCACTACT...TGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | GTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGACGCAATGCCTCCAGCTTaGAAGGGGCCACTCTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: VSMDSVSTDISRLRPAADAMPPA*KGPLLH Trigger: ATGCAAGAGTGGCCCCTTCCAAGCTGGAGGCATTGC...GTCTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | TCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGGGACTGGGCTTTCGATaGTCTAACTGCTCCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: SQSPSTSARVKQGPSPTMGLGFR*SNCSNF Trigger: GAAGTTGGAGCAGTTAGACCATCGAAAGCCCAGTCC...CATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | GCTTTTCCTATATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAGTTGGGGTATGTGACTaGGGCTTTCTCCTCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: AFPISQSPSTSARVKQGPVGVCD*GFLLSW Trigger: CCAGCTGAGGAGAAAGCCTCAGTCACATACCCCAAC...TGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATATAGGAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | TCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGCCTGCAGAAACTTGGTaGAACTCTCAGGAAGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SQSPSTSARVKQGPSPTMPAETW*NSQEVC Trigger: ACACACTTCCTGAGAGTTTCACCAAGTTTCTGCAGG...CATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | GCTTTTCCTATATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAGTACCAGGCTCCCAGTaGGCAGGTGGAGAAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: AFPISQSPSTSARVKQGPVPGSQ*AGGERC Trigger: ACATCTTTCTCCACCTGCTCACTGGGAGCCTGGTAC...TGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATATAGGAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | CAGTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGTTCTTCCCTACCATCTaGGTCAGCTTCTGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: QLAWTQSALTSAGSGLLQFFPTI*VSFCTT Trigger: GGTGGTGCAGAAGCTGACGCAGATGGTAGGGAAGAA...CTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | CAGTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGGCTCAGCTCGTAACGTaGAGTAGTGCACATTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QLAWTQSALTSAGSGLLQAQLVT*SSAHSW Trigger: CCAGGAATGTGCACTACTGCACGTTACGAGCTGAGC...CTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAACTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | ACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCTGGCTAACCAGCTCCTaGAAGTGCCTGATGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TSSWEKLEEGEPCQRTPLWLTSS*KCLMVL Trigger: GAGCACCATCAGGCACTTGCAGGAGCTGGTTAGCCA...GAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | GCTTTTCCTATATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCACCACCTCACAAGCCATaGGCTGCTCCTGCAGAAACT | + |
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Preference number: 4 (lower is better) Translates to: AFPISQSPSTSARVKQGPPPHKP*AAPAET Trigger: AGTTTCTGCAGGAGCAGCGCATGGCTTGTGAGGTGG...TGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATATAGGAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | ACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCGGAAGGGGCCACTCTTaGATGCAAGTGGAGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TSSWEKLEEGEPCQRTPLGRGHS*MQVEEK Trigger: CTTCTCCTCCACTTGCATGCAAGAGTGGCCCCTTCC...GAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | GTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGACCACCAGGTGAACTTATaGCAGGGATCCACAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VSMDSVSTDISRLRPAADHQVNL*QGSTVQ Trigger: CTGCACTGTGGATCCCTGCCATAAGTTCACCTGGTG...GTCTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | TGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCTCAGCTCAGTCTTGGGGGAAGGGCTaGAGAAGTTGTGCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: WEKLEEGEPCQRTPLSAQSWGKG*RSCAAQ Trigger: CTGTGCTGCACAACTTCTTCAGCCCTTCCCCCAAGA...CTGAGCTGAGAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | ACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCGGGCTGAAGAAGTTGTaGAGCACAGAGAGCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TSSWEKLEEGEPCQRTPLGLKKL*STESSV Trigger: CACAGAGCTCTCTGTGCTGCACAACTTCTTCAGCCC...GAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR GCA 90 bp | TTTTGGGACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCAGCTCCTGCAAGTaGCTGATGGTGCTCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: FWDQLLGETRGGRTLPKNTSSCK*LMVLRD Trigger: GTCCCTGAGCACCATCAGGCACTTGCAGGAGCTGGT...GTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGTCCCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | TGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCTCAGCTCAGGAGGCTCGGTGCAGTTaGTCAGGGTCTCTTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: WEKLEEGEPCQRTPLSAQEARCS*SGSLSG Trigger: ACCTGAAAGAGACCCTGACCAACTGCACCGAGCCTC...CTGAGCTGAGAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | CCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGACGTAGGGATGGCATCTTaGCCAAAGAAAAGCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PITIHLCQGQAGAKSHHDVGMAS*PKKSSF Trigger: AAAAGAGCTTTTCTTTGGTCAAGATGCCATCCCTAC...GTCATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | TTTTGGGACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACCAGAGAGCTCTGTGCTaGAGAGCGCACTCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWDQLLGETRGGRTLPKNQRALC*RAHSLS Trigger: AGAAAGAGAGTGCGCTCTTCAGCACAGAGCTCTCTG...GTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGTCCCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR TCA 90 bp | TGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCTCAGCTCAGCAGTGCAGATGTCACTaGCGTCCAAGTCATGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WEKLEEGEPCQRTPLSAQQCRCH*RPSHAK Trigger: CTTTGCATGACTTGGACGTCAGTGACATCTGCACTG...CTGAGCTGAGAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | TTTGCTTTGTATTGCAAAGATAAACTGAGGCAGGGAGCTACAGGGCAGAGCTCTGCTCCTGCAAGTGCCTaGTGGTGCTCAGGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FALYCKDKLRQGATGQSSAPASA*WCSGTV Trigger: CACTGTCCCTGAGCACCATCAGGCACTTGCAGGAGC...AGAGCTCTGCCCTGTAGCTCCCTGCCTCAGTTTATCTTTGCAATACAAAGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTTGTATTGCAAAGATAAACTGAGGCAGGGAGCTACAGGGCAGAGCTCTCTGGGCAGTGTCTCCTaGCTAACCAGCTCCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FALYCKDKLRQGATGQSSLGSVS*LTSSCK Trigger: CTTGCAGGAGCTGGTTAGCCAGGAGACACTGCCCAG...AGAGCTCTGCCCTGTAGCTCCCTGCCTCAGTTTATCTTTGCAATACAAAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCGGCTCCTTGAAGACCTaGCTATCTATTAAGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSSWEKLEEGEPCQRTPLGSLKT*LSIKSH Trigger: ATGGGACTTAATAGATAGCCAGGTCTTCAAGGAGCC...GAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTGTATTGCAAAGATAAACTGAGGCAGGGAGCTACAGGGCAGAGCTCTCATCCAGGCACCAGGTaGACTTATGGCAGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FALYCKDKLRQGATGQSSHPGTR*TYGRDP Trigger: TGGATCCCTGCCATAAGTTCACCTGGTGCCTGGATG...AGAGCTCTGCCCTGTAGCTCCCTGCCTCAGTTTATCTTTGCAATACAAAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTTGTATTGCAAAGATAAACTGAGGCAGGGAGCTACAGGGCAGAGCTCTAGGCAGATCCAGTGCTaGTGTCTCTGCAGCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FALYCKDKLRQGATGQSSRQIQC*CLCSLG Trigger: ACCCAAGCTGCAGAGACACCAGCACTGGATCTGCCT...AGAGCTCTGCCCTGTAGCTCCCTGCCTCAGTTTATCTTTGCAATACAAAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTGTATTGCAAAGATAAACTGAGGCAGGGAGCTACAGGGCAGAGCTCTGGAGAAAGATGTCACTaGAGGCCAGGTCACCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: FALYCKDKLRQGATGQSSGERCH*RPGHQT Trigger: CGTTTGGTGACCTGGCCTTCAGTGACATCTTTCTCC...AGAGCTCTGCCCTGTAGCTCCCTGCCTCAGTTTATCTTTGCAATACAAAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR GCA 90 bp | TACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAAGACAAACCGTTCCCGGATaGAGGCATCCAGGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSKAKTHSWGRICFVLQRQTVPG*RHPGTR Trigger: CCTGGTGCCTGGATGCCTGCATCCGGGAACGGTTTG...TCTTTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CCA 90 bp | CCCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAGGTGTCTCTGCAGCTTaGGTAGGACTGGGCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PYSKAKTHSWGRICFVLQGVSAA*VGLGFR Trigger: TCGAAAGCCCAGTCCTACCCAAGCTGCAGAGACACC...TTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR GCA 90 bp | CCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAAAGTGTGCGCAGGAACTaGAGCACCATGTCGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTQRLKHIAGEGFALYCKSVRRN*STMSYS Trigger: GCTGTACGACATGGTGCTGCAGTTCCTGCGCACACT...TTTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR TCA 90 bp | CCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAAAGAAGCCTCAGCACATaGCGGTGCACATTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTQRLKHIAGEGFALYCKRSLST*RCTFSF Trigger: GAAGGAGAATGTGCACCGTCATGTGCTGAGGCTTCT...TTTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTTGTATTGCAAAGATAAACTGAGGCAGGGAGCTACAGGGCAGAGCTCTGCATTCTTGTTTCTCTaGTTGGTGATGTGTAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: FALYCKDKLRQGATGQSSAFLFL*LVMCRT Trigger: CGTCCTACACATCACCAAGCAGAGAAACAAGAATGC...AGAGCTCTGCCCTGTAGCTCCCTGCCTCAGTTTATCTTTGCAATACAAAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CCA 90 bp | CCCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAACTCCCAGTGAGCAGGTaGAGAAAGATGTCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYSKAKTHSWGRICFVLQLPVSR*RKMSLK Trigger: CTTCAGTGACATCTTTCTCCACCTGCTCACTGGGAG...TTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR TCA 90 bp | TACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAAGATCATCAAACACTGACTaGTGGAACTCCAGCCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSKAKTHSWGRICFVLQRSSNTD*WNSSRG Trigger: ACCGCGGCTGGAGTTCCATCAGTCAGTGTTTGATGA...TCTTTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR GCA 90 bp | TACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAAGATCACAAGCCATGCGCTaGTCCTGCAGAAACTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSKAKTHSWGRICFVLQRSQAMR*SCRNLV Trigger: CACCAAGTTTCTGCAGGAGCAGCGCATGGCTTGTGA...TCTTTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| 3UTR CAA 72 bp | CAAATCTACTTTGGTGAACCTAGCATACCTTGGACTTaGTGCAGATTGAATATCAGGTCAGTCAGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QIYFGEPSIPWT*CRLNIRSVRPL Trigger: CAGAGGCCTGACTGACCTGATATTCAATCTGCACAAAGTCCAAGGTATGCTAGGTTCACCAAAGTAGATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CCA 90 bp | TACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAAGAGGCTTTCTCCTCAGCTaGAAGCTTCTGATCTACGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKAKTHSWGRICFVLQRGFLLS*KLLIYV Trigger: AACGTAGATCAGAAGCTTCCAGCTGAGGAGAAAGCC...TCTTTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR TCA 90 bp | CCTACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAATGTTTCTCTGCTTGGTaGTGTGTAGGACGTAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: PTQRLKHIAGEGFALYCKCFSAW*CVGRSI Trigger: TATACTACGTCCTACACATCACCAAGCAGAGAAACA...TTTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS CCA 90 bp | GAGGCTCGGTGCAGTTGGTCAGGGTCTCTTTCAGGTCCTCGCCATTaGCCACGCCCAGGTCCTGGAGCCCCGCGAACATGGCGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EARCSWSGSLSGPRH*PRPGPGAPRTWRRL Trigger: GAGCCTCCGCCATGTTCGCGGGGCTCCAGGACCTGGGCGTGGCCAATGGCGAGGACCTGAAAGAGACCCTGACCAACTGCACCGAGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CAA 90 bp | TCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGCTGCACCACCTCTCCTaGGCGCCGGGTCTTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQSPSTSARVKQGPSPTMLHHLS*APGLGG Trigger: TCCCCCAAGACCCGGCGCCAAGGAGAGGTGGTGCAG...CATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS CCA 90 bp | CGCTCTGGCCTGTGGGCTCCAGAGCCTTCTGCAATGCCTCCAGCTTaGAAGGGGCCACTCTTGCATGCAAGTGGAGGAGAAGCCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSGLWAPEPSAMPPA*KGPLLHASGGEASA Trigger: TGCTGAGGCTTCTCCTCCACTTGCATGCAAGAGTGGCCCCTTCCAAGCTGGAGGCATTGCAGAAGGCTCTGGAGCCCACAGGCCAGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CAA 90 bp | GTTAGCATGGACTCAGTCAGCACTGACATCAGCAGGCTCAGGCCTGCTGCAGACCCTTGGCGCCGGGTCTaGGGGGAAGGGCTGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSMDSVSTDISRLRPAADPWRRV*GEGLKK Trigger: CTTCTTCAGCCCTTCCCCCAAGACCCGGCGCCAAGG...GTCTGCAGCAGGCCTGAGCCTGCTGATGTCAGTGCTGACTGAGTCCATGCTAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CAA 90 bp | CCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGACAGCATCGGCAGGAACTaGGTGATGAGCTCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PITIHLCQGQAGAKSHHDSIGRN*VMSSAS Trigger: GGAGGCAGAGCTCATCACCAAGTTCCTGCCGATGCT...GTCATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CAA 90 bp | CCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGACTGCAATGCCTCCAGCTaGGAAGGGGCCACTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PITIHLCQGQAGAKSHHDCNASS*EGATLA Trigger: TGCAAGAGTGGCCCCTTCCAAGCTGGAGGCATTGCA...GTCATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS GCA 90 bp | ACCTCTCCTTGGCGCCGGGTCTTGGGGGAAGGGCTGAAGAAGTTGTaGAGCACAGAGAGCTCTGTGCTGAAGAGCGCACTCTCTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSPWRRVLGEGLKKL*STESSVLKSALSFS Trigger: AGAGAAAGAGAGTGCGCTCTTCAGCACAGAGCTCTCTGTGCTGCACAACTTCTTCAGCCCTTCCCCCAAGACCCGGCGCCAAGGAGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS GCA 90 bp | AGGTCGGGACTATCCCTGGGCAGTGTCTCCTGGCTAACCAGCTCCTaGAAGTGCCTGATGGTGCTCAGGGACAGTGTGTTGATGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSGLSLGSVSWLTSS*KCLMVLRDSVLMAK Trigger: CTTTGCCATCAACACACTGTCCCTGAGCACCATCAGGCACTTGCAGGAGCTGGTTAGCCAGGAGACACTGCCCAGGGATAGTCCCGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CCA 90 bp | CTAAGTAGTAGGAGGAGGTCGGGACTATCCCTGGGCAGTGTCTCCTaGCTAACCAGCTCCTGCAAGTGCCTGATGGTGCTCAGGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSRRRSGLSLGSVS*LTSSCKCLMVLRDS Trigger: ACTGTCCCTGAGCACCATCAGGCACTTGCAGGAGCTGGTTAGCCAGGAGACACTGCCCAGGGATAGTCCCGACCTCCTCCTACTACTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS-3UTR CAA 90 bp | CCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGACGAAGGGCTGAAGAAGTaGTGCAGCACAGAGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PITIHLCQGQAGAKSHHDEGLKK*CSTESS Trigger: AGAGCTCTCTGTGCTGCACAACTTCTTCAGCCCTTC...GTCATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS GCA 90 bp | CCTTCTTCACACCATCAAGAAATCCCTGAAGCTCCCGGGCTCTTTTaGTGTCCACAAACCGTTCCCGGATGCAGGCATCCAGGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSHHQEIPEAPGLF*CPQTVPGCRHPGTR Trigger: CCTGGTGCCTGGATGCCTGCATCCGGGAACGGTTTGTGGACAGCAAAAGAGCCCGGGAGCTTCAGGGATTTCTTGATGGTGTGAAGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CCA 90 bp | GGCACGCTGGGAAGAGGCAGATCCAGTGCTGGTGTCTCTGCAGCTTaGGTAGGACTGGGCTTTCGATGGTCTAACTGCTCCAACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTLGRGRSSAGVSAA*VGLGFRWSNCSNFS Trigger: TGAGAAGTTGGAGCAGTTAGACCATCGAAAGCCCAGTCCTACCCAAGCTGCAGAGACACCAGCACTGGATCTGCCTCTTCCCAGCGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CAA 90 bp | ACCAGCTCCTGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCGCCCGGTACAACTCCTaGTCAGCCATCACCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSSWEKLEEGEPCQRTPLARYNS*SAITSF Trigger: GAAGCTGGTGATGGCTGACAAGGAGTTGTACCGGGC...GAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCAGGAGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CAA 90 bp | TCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGCAAATCCCCCAAAACTaGTTCCTGGCCCTTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQSPSTSARVKQGPSPTMQIPQN*FLALLH Trigger: GTGAAGAAGGGCCAGGAACAAGTTTTGGGGGATTTG...CATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CAA 90 bp | TCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATGCGCAGGAGAGCATTCTaGTTTCTCTGCTTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQSPSTSARVKQGPSPTMRRRAF*FLCLVM Trigger: CATCACCAAGCAGAGAAACAAGAATGCTCTCCTGCG...CATGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CCA 90 bp | ACAAACCGTTCCCGGATGCAGGCATCCAGGCACCAGGTGAACTTATaGCAGGGATCCACAGTGCAGATGTCACTGACGTCCAAGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TNRSRMQASRHQVNL*QGSTVQMSLTSKSC Trigger: GCATGACTTGGACGTCAGTGACATCTGCACTGTGGATCCCTGCCATAAGTTCACCTGGTGCCTGGATGCCTGCATCCGGGAACGGTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS TCA 90 bp | GTCCAGGCAGCAGGCGCAGGAGAGCATTCTTGTTTCTCTGCTTGGTaGTGTGTAGGACGTAGTATAGTCCCACCTCACAAGCCATGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQAAGAGEHSCFSAW*CVGRSIVPPHKPCA Trigger: AGCGCATGGCTTGTGAGGTGGGACTATACTACGTCCTACACATCACCAAGCAGAGAAACAAGAATGCTCTCCTGCGCCTGCTGCCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000124900.2 |
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| CDS TCA 90 bp | CCCAAAACTTGTTCCTGGCCCTTCTTCACACCATCAAGAAATCCCTaGAGCTCCCGGGCTCTTTTGCTGTCCACAAACCGTTCCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PKTCSWPFFTPSRNP*SSRALLLSTNRSRM Trigger: CATCCGGGAACGGTTTGTGGACAGCAAAAGAGCCCGGGAGCTTCAGGGATTTCTTGATGGTGTGAAGAAGGGCCAGGAACAAGTTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
||
| CDS CCA 90 bp | TTAGGCTCCTTGAAGACCTGGCTATCTATTAAGTCCCATGCACCTTaGCCCAGTGCCAGCAGCCTAAGTAGTAGGAGGAGGTCGGGACTA | + |
|
Preference number: 5 (lower is better) Translates to: LGSLKTWLSIKSHAP*PSASSLSSRRRSGL Trigger: TAGTCCCGACCTCCTCCTACTACTTAGGCTGCTGGCACTGGGCCAAGGTGCATGGGACTTAATAGATAGCCAGGTCTTCAAGGAGCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTTCCTATATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGGTCTTCCAGCTTCTaGTACCTCTCCTCTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AFPISQSPSTSARVKQGPRSSSF*YLSSAF Trigger: AAAGGCAGAGGAGAGGTACAAGAAGCTGGAAGACCT...TGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATATAGGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CAA 90 bp | TATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCAAGTCCCACCATCCATCTTAGGCTCCTaGAAGACCTGGCTATCTATT | + |
|
Preference number: 5 (lower is better) Translates to: YPNHHPPLPGSSRGQVPPSILGS*KTWLSI Trigger: AATAGATAGCCAGGTCTTCAAGGAGCCTAAGATGGA...TGGTGGGACTTGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS TCA 90 bp | GACACTCGTTCCAGAAGTTTGTCACGTAGTTCATCAAACACTGACTaGTGGAACTCCAGCCGCGGTGTCCCGTGTAGATCCAAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DTRSRSLSRSSSNTD*WNSSRGVPCRSKKG Trigger: GCCCTTCTTGGATCTACACGGGACACCGCGGCTGGAGTTCCATCAGTCAGTGTTTGATGAACTACGTGACAAACTTCTGGAACGAGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS GCA 90 bp | AGCCTGGTTGTCTTGCCAAATCTGCCTCTTCACTTCCACAGCACATaGCCGGTACAACTCCTTGTCAGCCATCACCAGCTTCAGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLVVLPNLPLHFHST*PVQLLVSHHQLQLL Trigger: AAGAAGCTGAAGCTGGTGATGGCTGACAAGGAGTTGTACCGGGCATGTGCTGTGGAAGTGAAGAGGCAGATTTGGCAAGACAACCAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS CCA 90 bp | AGGGCAAATTCATCAGCAAGCAGTACCAGGCTCCCAGTGAGCAGGTaGAGAAAGATGTCACTGAAGGCCAGGTCACCAAACGTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RANSSASSTRLPVSR*RKMSLKARSPNVST Trigger: TGTGGAAACGTTTGGTGACCTGGCCTTCAGTGACATCTTTCTCCACCTGCTCACTGGGAGCCTGGTACTGCTTGCTGATGAATTTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000124900.2 |
||
| CDS GCA 90 bp | GGTGAGACTTCATCACCAAAGAGAGCCTGGTTGTCTTGCCAAATCTaGCTCTTCACTTCCACAGCACATGCCCGGTACAACTCCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GETSSPKRAWLSCQI*LFTSTAHARYNSLS Trigger: TGACAAGGAGTTGTACCGGGCATGTGCTGTGGAAGTGAAGAGGCAGATTTGGCAAGACAACCAGGCTCTCTTTGGTGATGAAGTCTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS GCA 90 bp | TTCAGCAGTGGTGAGACTTCATCACCAAAGAGAGCCTGGTTGTCTTaGCAAATCTGCCTCTTCACTTCCACAGCACATGCCCGGTACAAC | + |
|
Preference number: 5 (lower is better) Translates to: FSSGETSSPKRAWLS*QICLFTSTAHARYN Trigger: GTTGTACCGGGCATGTGCTGTGGAAGTGAAGAGGCAGATTTGGCAAGACAACCAGGCTCTCTTTGGTGATGAAGTCTCACCACTGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAAACTAGAGGAGGGAGAACCTTGCCAAAGAACACCCCTCTCAGCTCAGTGCTCCTGCAGAAACTaGGTGAAACTCTCAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: WEKLEEGEPCQRTPLSAQCSCRN*VKLSGS Trigger: ACTTCCTGAGAGTTTCACCAAGTTTCTGCAGGAGCA...CTGAGCTGAGAGGGGTGTTCTTTGGCAAGGTTCTCCCTCCTCTAGTTTCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS GCA 90 bp | GAGAGCTCTGTGCTGAAGAGCGCACTCTCTTTCTCTAGGATATACTaGTTCAGCAGTGGTGAGACTTCATCACCAAAGAGAGCCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESSVLKSALSFSRIY*FSSGETSSPKRAWL Trigger: CAACCAGGCTCTCTTTGGTGATGAAGTCTCACCACTGCTGAAGCAGTATATCCTAGAGAAAGAGAGTGCGCTCTTCAGCACAGAGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CAA 90 bp | GCTTTTCCTATATCCCAATCACCATCCACCTCTGCCAGGGTCAAGCAGGGGCCATGTAGGGATGGCATCTaGACCAAAGAAAAGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AFPISQSPSTSARVKQGPCRDGI*TKEKLF Trigger: AAAGAGCTTTTCTTTGGTCAAGATGCCATCCCTACA...TGGCCCCTGCTTGACCCTGGCAGAGGTGGATGGTGATTGGGATATAGGAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS TCA 90 bp | CAGAAACTTGGTGAAACTCTCAGGAAGTGTGTTGGGGTATGTGACTaGGGCTTTCTCCTCAGCTGGAAGCTTCATCTTAGGCTCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: QKLGETLRKCVGVCD*GFLLSWKLHLRLLE Trigger: TTCAAGGAGCCTAAGATGAAGCTTCCAGCTGAGGAGAAAGCCTCAGTCACATACCCCAACACACTTCCTGAGAGTTTCACCAAGTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124900.2 |
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| CDS TCA 90 bp | CAGAAACTTGGTGAAACTCTCAGGAAGTGTGTTGGGGTATGTGACTaGGGCTTTCTCCTCAGCTGGAAGCTTCTGATCTACGTTGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QKLGETLRKCVGVCD*GFLLSWKLLIYVES Trigger: ACTTTCAACGTAGATCAGAAGCTTCCAGCTGAGGAGAAAGCCTCAGTCACATACCCCAACACACTTCCTGAGAGTTTCACCAAGTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS-3UTR CAA 90 bp | TACTCAAAGGCTAAAACACATAGCTGGGGAAGGATTTGCTTTGTATTGCAAAGAAGAGGCTCGGTGCAGTaGGTCAGGGTCTCTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSKAKTHSWGRICFVLQRRGSVQ*VRVSFR Trigger: CCTGAAAGAGACCCTGACCAACTGCACCGAGCCTCT...TCTTTGCAATACAAAGCAAATCCTTCCCCAGCTATGTGTTTTAGCCTTTGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS TCA 72 bp | ATCCCCACCGCGCTCCGCTGGAGCCGTAGCGGACCCTaGCGGAGCCCCAGAAGCCCTCTCCACGGTGCCACG | + |
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Preference number: 6 (lower is better) Translates to: IPTALRWSRSGP*RSPRSPLHGAT Trigger: CGTGGCACCGTGGAGAGGGCTTCTGGGGCTCCGTCAGGGTCCGCTACGGCTCCAGCGGAGCGCGGTGGGGAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CCA 72 bp | TCTTTCAGGTCCTCGCCATTGGCCACGCCCAGGTCCTaGAGCCCCGCGAACATGGCGGAGGCTCCGGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SFRSSPLATPRS*SPANMAEAPAD Trigger: GTCCGCCGGAGCCTCCGCCATGTTCGCGGGGCTCCAGGACCTGGGCGTGGCCAATGGCGAGGACCTGAAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CCA 72 bp | TGCAGTTGGTCAGGGTCTCTTTCAGGTCCTCGCCATTaGCCACGCCCAGGTCCTGGAGCCCCGCGAACATGG | + |
|
Preference number: 6 (lower is better) Translates to: CSWSGSLSGPRH*PRPGPGAPRTW Trigger: CCATGTTCGCGGGGCTCCAGGACCTGGGCGTGGCCAATGGCGAGGACCTGAAAGAGACCCTGACCAACTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CAA 90 bp | CCGCTCTGGCCTGTGGGCTCCAGAGCCTTCTGCAATGCCTCCAGCTaGGAAGGGGCCACTCTTGCATGCAAGTGGAGGAGAAGCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLWPVGSRAFCNASS*EGATLACKWRRSLS Trigger: GCTGAGGCTTCTCCTCCACTTGCATGCAAGAGTGGCCCCTTCCAAGCTGGAGGCATTGCAGAAGGCTCTGGAGCCCACAGGCCAGAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS GCA 72 bp | TGGCGCCGGGTCTTGGGGGAAGGGCTGAAGAAGTTGTaGAGCACAGAGAGCTCTGTGCTGAAGAGCGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: WRRVLGEGLKKL*STESSVLKSAL Trigger: GAGTGCGCTCTTCAGCACAGAGCTCTCTGTGCTGCACAACTTCTTCAGCCCTTCCCCCAAGACCCGGCGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CCA 72 bp | AGGAGGAGGTCGGGACTATCCCTGGGCAGTGTCTCCTaGCTAACCAGCTCCTGCAAGTGCCTGATGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRRSGLSLGSVS*LTSSCKCLMVL Trigger: GAGCACCATCAGGCACTTGCAGGAGCTGGTTAGCCAGGAGACACTGCCCAGGGATAGTCCCGACCTCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CCA 72 bp | TGGAGCAGGCACGCTGGGAAGAGGCAGATCCAGTGCTaGTGTCTCTGCAGCTTGGGTAGGACTGGGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: WSRHAGKRQIQC*CLCSLGRTGLS Trigger: CGAAAGCCCAGTCCTACCCAAGCTGCAGAGACACCAGCACTGGATCTGCCTCTTCCCAGCGTGCCTGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CAA 72 bp | CCTTGGCGCCGGGTCTTGGGGGAAGGGCTGAAGAAGTaGTGCAGCACAGAGAGCTCTGTGCTGAAGAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWRRVLGEGLKK*CSTESSVLKSA Trigger: TGCGCTCTTCAGCACAGAGCTCTCTGTGCTGCACAACTTCTTCAGCCCTTCCCCCAAGACCCGGCGCCAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CAA 72 bp | GTCAGCTTCTGCACCACCTCTCCTTGGCGCCGGGTCTaGGGGGAAGGGCTGAAGAAGTTGTGCAGCACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSFCTTSPWRRV*GEGLKKLCSTE Trigger: CTCTGTGCTGCACAACTTCTTCAGCCCTTCCCCCAAGACCCGGCGCCAAGGAGAGGTGGTGCAGAAGCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CAA 90 bp | ACCACCTCTCCTTGGCGCCGGGTCTTGGGGGAAGGGCTGAAGAAGTaGTGCAGCACAGAGAGCTCTGTGCTGAAGAGCGCACTCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TTSPWRRVLGEGLKK*CSTESSVLKSALSF Trigger: GAAAGAGAGTGCGCTCTTCAGCACAGAGCTCTCTGTGCTGCACAACTTCTTCAGCCCTTCCCCCAAGACCCGGCGCCAAGGAGAGGTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CAA 90 bp | GCTCCAGAGCCTTCTGCAATGCCTCCAGCTTGGAAGGGGCCACTCTaGCATGCAAGTGGAGGAGAAGCCTCAGCACATGACGGTGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: APEPSAMPPAWKGPL*HASGGEASAHDGAH Trigger: ATGTGCACCGTCATGTGCTGAGGCTTCTCCTCCACTTGCATGCAAGAGTGGCCCCTTCCAAGCTGGAGGCATTGCAGAAGGCTCTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CCA 72 bp | GCAGCTCAGCTCGTAACGTGCAGTAGTGCACATTCCTaGTCCGCAGGAACAGTGTGCGCAGGAACTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAQLVTCSSAHS*SAGTVCAGTAA Trigger: TGCTGCAGTTCCTGCGCACACTGTTCCTGCGGACCAGGAATGTGCACTACTGCACGTTACGAGCTGAGCTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CCA 72 bp | TCCCGGATGCAGGCATCCAGGCACCAGGTGAACTTATaGCAGGGATCCACAGTGCAGATGTCACTGACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRMQASRHQVNL*QGSTVQMSLTS Trigger: GGACGTCAGTGACATCTGCACTGTGGATCCCTGCCATAAGTTCACCTGGTGCCTGGATGCCTGCATCCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS TCA 72 bp | CAAACCGTTCCCGGATGCAGGCATCCAGGCACCAGGTaGACTTATGGCAGGGATCCACAGTGCAGATGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QTVPGCRHPGTR*TYGRDPQCRCH Trigger: GTGACATCTGCACTGTGGATCCCTGCCATAAGTTCACCTGGTGCCTGGATGCCTGCATCCGGGAACGGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CCA 72 bp | GGAAGAGGCAGATCCAGTGCTGGTGTCTCTGCAGCTTaGGTAGGACTGGGCTTTCGATGGTCTAACTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRGRSSAGVSAA*VGLGFRWSNCS Trigger: GGAGCAGTTAGACCATCGAAAGCCCAGTCCTACCCAAGCTGCAGAGACACCAGCACTGGATCTGCCTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS TCA 72 bp | ACTCTTGCATGCAAGTGGAGGAGAAGCCTCAGCACATaGCGGTGCACATTCTCCTTCCTGGGAGAGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TLACKWRRSLST*RCTFSFLGEAV Trigger: CACTGCCTCTCCCAGGAAGGAGAATGTGCACCGTCATGTGCTGAGGCTTCTCCTCCACTTGCATGCAAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000124900.2 |
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| CDS GCA 72 bp | CACCATCAAGAAATCCCTGAAGCTCCCGGGCTCTTTTaGTGTCCACAAACCGTTCCCGGATGCAGGCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: HHQEIPEAPGLF*CPQTVPGCRHP Trigger: TGGATGCCTGCATCCGGGAACGGTTTGTGGACAGCAAAAGAGCCCGGGAGCTTCAGGGATTTCTTGATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CAA 72 bp | TCATCCACCACGAGGGACATGAGCATCGGCAGGAACTaGGTGATGAGCTCTGCCTCCATCTTAGGCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSTTRDMSIGRN*VMSSASILGSL Trigger: CAAGGAGCCTAAGATGGAGGCAGAGCTCATCACCAAGTTCCTGCCGATGCTCATGTCCCTCGTGGTGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS GCA 72 bp | ACATTCCTGGTCCGCAGGAACAGTGTGCGCAGGAACTaGAGCACCATGTCGTACAGCTTCACATTCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TFLVRRNSVRRN*STMSYSFTFFP Trigger: AGGGAAGAATGTGAAGCTGTACGACATGGTGCTGCAGTTCCTGCGCACACTGTTCCTGCGGACCAGGAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CCA 72 bp | TCATCAGCAAGCAGTACCAGGCTCCCAGTGAGCAGGTaGAGAAAGATGTCACTGAAGGCCAGGTCACCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSASSTRLPVSR*RKMSLKARSPN Trigger: GTTTGGTGACCTGGCCTTCAGTGACATCTTTCTCCACCTGCTCACTGGGAGCCTGGTACTGCTTGCTGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000124900.2 |
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| CDS CAA 72 bp | CCCACCTCACAAGCCATGCGCTGCTCCTGCAGAAACTaGGTGAAACTCTCAGGAAGTGTGTTGGGGTATGTG | + |
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Preference number: 6 (lower is better) Translates to: PTSQAMRCSCRN*VKLSGSVLGYV Trigger: CACATACCCCAACACACTTCCTGAGAGTTTCACCAAGTTTCTGCAGGAGCAGCGCATGGCTTGTGAGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000124900.2 |
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| CDS CAA 90 bp | CTAACCAGCTCCTGCAAGTGCCTGATGGTGCTCAGGGACAGTGTGTaGATGGCAAAGGGGTCGCACAGGATCATAGACAAATCCCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LTSSCKCLMVLRDSV*MAKGSHRIIDKSPK Trigger: TTTGGGGGATTTGTCTATGATCCTGTGCGACCCCTTTGCCATCAACACACTGTCCCTGAGCACCATCAGGCACTTGCAGGAGCTGGTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS TCA 72 bp | TGTTCCTGGCCCTTCTTCACACCATCAAGAAATCCCTaGAGCTCCCGGGCTCTTTTGCTGTCCACAAACCGT | + |
|
Preference number: 6 (lower is better) Translates to: CSWPFFTPSRNP*SSRALLLSTNR Trigger: ACGGTTTGTGGACAGCAAAAGAGCCCGGGAGCTTCAGGGATTTCTTGATGGTGTGAAGAAGGGCCAGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS GCA 72 bp | GTCTTGCCAAATCTGCCTCTTCACTTCCACAGCACATaGCCGGTACAACTCCTTGTCAGCCATCACCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLPNLPLHFHST*PVQLLVSHHQL Trigger: AAGCTGGTGATGGCTGACAAGGAGTTGTACCGGGCATGTGCTGTGGAAGTGAAGAGGCAGATTTGGCAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS GCA 72 bp | GGATCCACAGTGCAGATGTCACTGACGTCCAAGTCATaGAAAGACATGAGCAGCTCAGCTCGTAACGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSTVQMSLTSKS*KDMSSSARNVQ Trigger: CTGCACGTTACGAGCTGAGCTGCTCATGTCTTTGCATGACTTGGACGTCAGTGACATCTGCACTGTGGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CCA 72 bp | TTGAAGACCTGGCTATCTATTAAGTCCCATGCACCTTaGCCCAGTGCCAGCAGCCTAAGTAGTAGGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LKTWLSIKSHAP*PSASSLSSRRR Trigger: CCTCCTCCTACTACTTAGGCTGCTGGCACTGGGCCAAGGTGCATGGGACTTAATAGATAGCCAGGTCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CAA 72 bp | TCCTGCAAGTGCCTGATGGTGCTCAGGGACAGTGTGTaGATGGCAAAGGGGTCGCACAGGATCATAGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: SCKCLMVLRDSV*MAKGSHRIIDK Trigger: TTTGTCTATGATCCTGTGCGACCCCTTTGCCATCAACACACTGTCCCTGAGCACCATCAGGCACTTGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CAA 90 bp | TACTGCTTCAGCAGTGGTGAGACTTCATCACCAAAGAGAGCCTGGTaGTCTTGCCAAATCTGCCTCTTCACTTCCACAGCACATGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: YCFSSGETSSPKRAW*SCQICLFTSTAHAR Trigger: CCGGGCATGTGCTGTGGAAGTGAAGAGGCAGATTTGGCAAGACAACCAGGCTCTCTTTGGTGATGAAGTCTCACCACTGCTGAAGCAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS TCA 72 bp | TCCAGAAGTTTGTCACGTAGTTCATCAAACACTGACTaGTGGAACTCCAGCCGCGGTGTCCCGTGTAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSLSRSSSNTD*WNSSRGVPCRS Trigger: GGATCTACACGGGACACCGCGGCTGGAGTTCCATCAGTCAGTGTTTGATGAACTACGTGACAAACTTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS TCA 72 bp | GCAGGCGCAGGAGAGCATTCTTGTTTCTCTGCTTGGTaGTGTGTAGGACGTAGTATAGTCCCACCTCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: AGAGEHSCFSAW*CVGRSIVPPHK Trigger: CTTGTGAGGTGGGACTATACTACGTCCTACACATCACCAAGCAGAGAAACAAGAATGCTCTCCTGCGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000124900.2 |
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| CDS CCA 72 bp | ATGAGCTCTGCCTCCATCTTAGGCTCCTTGAAGACCTaGCTATCTATTAAGTCCCATGCACCTTGGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MSSASILGSLKT*LSIKSHAPWPS Trigger: ACTGGGCCAAGGTGCATGGGACTTAATAGATAGCCAGGTCTTCAAGGAGCCTAAGATGGAGGCAGAGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CAA 72 bp | AGCAGTGGTGAGACTTCATCACCAAAGAGAGCCTGGTaGTCTTGCCAAATCTGCCTCTTCACTTCCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSGETSSPKRAW*SCQICLFTSTA Trigger: TGCTGTGGAAGTGAAGAGGCAGATTTGGCAAGACAACCAGGCTCTCTTTGGTGATGAAGTCTCACCACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CAA 72 bp | AACTTGGTGATGAGCTCTGCCTCCATCTTAGGCTCCTaGAAGACCTGGCTATCTATTAAGTCCCATGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: NLVMSSASILGS*KTWLSIKSHAP Trigger: AGGTGCATGGGACTTAATAGATAGCCAGGTCTTCAAGGAGCCTAAGATGGAGGCAGAGCTCATCACCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS GCA 72 bp | GTGCTGAAGAGCGCACTCTCTTTCTCTAGGATATACTaGTTCAGCAGTGGTGAGACTTCATCACCAAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VLKSALSFSRIY*FSSGETSSPKR Trigger: TCTCTTTGGTGATGAAGTCTCACCACTGCTGAAGCAGTATATCCTAGAGAAAGAGAGTGCGCTCTTCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059849.15 |
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| CDS CAA 72 bp | ATAACACACATCACCACTGGTTGTAGGGATGGCATCTaGACCAAAGAAAAGCTCTTTTCCAGAAGGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ITHITTGCRDGI*TKEKLFSRRSS Trigger: GGAAGACCTTCTGGAAAAGAGCTTTTCTTTGGTCAAGATGCCATCCCTACAACCAGTGGTGATGTGTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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| CDS CAA 90 bp | AAGTGTTTCATAACACACATCACCACTGGTTGTAGGGATGGCATCTaGACCAAAGAAAAGCTCTTTTCCAGAAGGTCTTCCAGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KCFITHITTGCRDGI*TKEKLFSRRSSSFL Trigger: CAAGAAGCTGGAAGACCTTCTGGAAAAGAGCTTTTCTTTGGTCAAGATGCCATCCCTACAACCAGTGGTGATGTGTGTTATGAAACACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059849.15 ENSMUST00000140934.2 |
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