Pregenerated sensors for NELFA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029111Ensembl transcript IDs: ENSMUST00000030993.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCAGAGAAATGGCTGGGCCCAGGAGCCTGTGGATCACAGGTGCTaGGTGGAGCACATCCTTCGGTATCTGCTCAGGTCACTCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: LQRNGWAQEPVDHRC*VEHILRYLLRSLST Trigger: TGTGCTGAGTGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCACAGGCTCCTGGGCCCAGCCATTTCTCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR GCA 90 bp | AGCCTGTGGATCACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTaGTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: SLWITGAGWSTSFGI*SGHSAQPANLVLWS Trigger: AGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCACAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR CCA 90 bp | CTGCCTCTCCTCTCCCAGGTTCTGACAGCTGTATATGCAGGGGTTTaGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAACACAGCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: LPLLSQVLTAVYAGV*SQSRESSSPETQLC Trigger: ACAGAGCTGTGTTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTGTCAGAACCTGGGAGAGGAGAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCACCTTTGGTCCCCTCAACCTCATGAGGGAGGGCATGCACAAGGAGAGAGACCTGTGGATCACAGGTaGTGGGTGGAGCACATCCTT | + |
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Preference number: 2 (lower is better) Translates to: CHLWSPQPHEGGHAQGERPVDHR*WVEHIL Trigger: AAGGATGTGCTCCACCCAGCACCTGTGATCCACAGG...TCTCTCTCCTTGTGCATGCCCTCCCTCATGAGGTTGAGGGGACCAAAGGTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR-3UTR CCA 90 bp | GTAACTGTGTCTGACTCCACAACTTCCTGGGTGCCCACAGTTGCTCTACCCATTCTCCAGAGAAATGGCTaGGCCCAGGAGCCTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: VTVSDSTTSWVPTVALPILQRNG*AQEPVD Trigger: ATCCACAGGCTCCTGGGCCCAGCCATTTCTCTGGAG...AATGGGTAGAGCAACTGTGGGCACCCAGGAAGTTGTGGAGTCAGACACAGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAATCCAGCTGTCACCTTTaGTCCCCTCAACCTCATGAG | + |
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Preference number: 2 (lower is better) Translates to: QLYMQGFGLRAGSQARLKSSCHL*SPQPHE Trigger: CTCATGAGGTTGAGGGGACCAAAGGTGACAGCTGGA...TTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR-3UTR GCA 90 bp | ACAACTTCCTGGGTGCCCACAGTTGCTCTACCCATTTACCAACCTTTATTTTCACCTTACCTCCAACCCTaGCTCTCCTCTCCCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: TTSWVPTVALPIYQPLFSPYLQP*LSSPRF Trigger: GAACCTGGGAGAGGAGAGGCAGGGTTGGAGGTAAGG...TGAAAATAAAGGTTGGTAAATGGGTAGAGCAACTGTGGGCACCCAGGAAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR GCA 72 bp | AGAAATGGCTGGGCCCAGGAGCCTGTGGATCACAGGTaGTGGGTGGAGCACATCCTTCGGTATCTGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: RNGWAQEPVDHR*WVEHILRYLLR Trigger: CCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCACAGGCTCCTGGGCCCAGCCATTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR CCA 72 bp | AATGGCTGGGCCCAGGAGCCTGTGGATCACAGGTGCTaGGTGGAGCACATCCTTCGGTATCTGCTCAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: NGWAQEPVDHRC*VEHILRYLLRS Trigger: TGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCACAGGCTCCTGGGCCCAGCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR GCA 72 bp | CCTGCCTCTCCTCTCCCAGGTTCTGACAGCTGTATATaGAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: PASPLPGSDSCI*RGLVSEQGVKL Trigger: GAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTGTCAGAACCTGGGAGAGGAGAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR TCA 72 bp | CCTTACCTCCAACCCTGCCTCTCCTCTCCCAGGTTCTaGCAGCTGTATATGCAGGGGTTTGGTCTCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: PYLQPCLSSPRF*QLYMQGFGLRA Trigger: TGCTCTGAGACCAAACCCCTGCATATACAGCTGTCAGAACCTGGGAGAGGAGAGGCAGGGTTGGAGGTAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR GCA 72 bp | ATCACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTaGTCAGGTCACTCAGCACAACCAGCAAACCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: ITGAGWSTSFGI*SGHSAQPANLV Trigger: GACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR CCA 72 bp | CTCTCCCAGGTTCTGACAGCTGTATATGCAGGGGTTTaGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: LSQVLTAVYAGV*SQSRESSSPET Trigger: TGTTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTGTCAGAACCTGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR TCA 72 bp | CCTTTTTCTTACACTTATTTAATATGTAACTGTGTCTaGCTCCACAACTTCCTGGGTGCCCACAGTTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: PFSYTYLICNCV*LHNFLGAHSCS Trigger: AGAGCAACTGTGGGCACCCAGGAAGTTGTGGAGTCAGACACAGTTACATATTAAATAAGTGTAAGAAAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | AAATGGCTGGGCCCAGGAGCCTGTGGATCACAGGTGCTGGGTGGAGCACATCCTGCAGGGACGCGATGCTaGGTGGCGCCCACAGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: KWLGPGACGSQVLGGAHPAGTRC*VAPTAR Trigger: ACGAGCTGTGGGCGCCACCCAGCATCGCGTCCCTGC...AGGATGTGCTCCACCCAGCACCTGTGATCCACAGGCTCCTGGGCCCAGCCATTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR GCA 90 bp | AAATGGCTGGGCCCAGGAGCCTGTGGATCACAGGTGCTGGGTGGAGCACATCCTACTGCCCTGGCCGTCTaGCTTGGGCAGATCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KWLGPGACGSQVLGGAHPTALAV*LGQILC Trigger: ACAGAGGATCTGCCCAAGGCAGACGGCCAGGGCAGT...AGGATGTGCTCCACCCAGCACCTGTGATCCACAGGCTCCTGGGCCCAGCCATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | GTGGATCACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTGCTCAGGTCACTCGCTGGGTTCCTCAGGTaGCCGGCTGGCTTCCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: VDHRCWVEHILRYLLRSLAGFLR*PAGFPR Trigger: TCTCGGGAAGCCAGCCGGCCACCTGAGGAACCCAGC...GAGTGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | GGCCCAGGAGCCTGTGGATCACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTGGCCACCATGGCCACTaGAGGTGTCTGAGCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GPGACGSQVLGGAHPSVSGHHGH*RCLSSR Trigger: CCTACTGCTCAGACACCTCCAGTGGCCATGGTGGCC...AGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCACAGGCTCCTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAAGTGCGGCGCGGGAGATaGAGCGTCCCGAGCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: QLYMQGFGLRAGSQARLKVRRGR*SVPSSS Trigger: GCTACTGCTCGGGACGCTGCATCTCCCGCGCCGCAC...TTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAGGACGCGATGCTGGGTaGCGCCCACAGCTCGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: TAVYAGVWSQSRESSSPEGRDAG*RPQLVR Trigger: ACGGACGAGCTGTGGGCGCCACCCAGCATCGCGTCC...TTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | TGTCACCTTTGGTCCCCTCAACCTCATGAGGGAGGGCATGCACAAGGAGAGAGAAGGTGCTGCAGGTGCTaGTGTAGCTGGGCTCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CHLWSPQPHEGGHAQGERRCCRC*CSWAQA Trigger: GGCCTGAGCCCAGCTACACCAGCACCTGCAGCACCT...TCTCTCTCCTTGTGCATGCCCTCCCTCATGAGGTTGAGGGGACCAAAGGTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR GCA 90 bp | CTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAACACGCGCCCAGCTTGTTGTaGAGCCACAGGCCGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LYMQGFGLRAGSQARLKHAPSLL*SHRPVS Trigger: TGACACCGGCCTGTGGCTGCACAACAAGCTGGGCGC...GTGTTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | CCTCAACCTCATGAGGGAGGGCATGCACAAGGAGAGAGAAAGAAAGCCCTCTCACCCACAGCTCGTCCGTaGCGCCCAGCTTGTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PQPHEGGHAQGERKKALSPTARP*RPACCA Trigger: TGCACAACAAGCTGGGCGCCACGGACGAGCTGTGGG...TGAGAGGGCTTTCTTTCTCTCTCCTTGTGCATGCCCTCCCTCATGAGGTTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAACCCCGGCCCTTAGCGTaGAATGGGACCCCAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: QLYMQGFGLRAGSQARLKPRPLA*NGTPAL Trigger: AAGTGCTGGGGTCCCATTCCACGCTAAGGGCCGGGG...TTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | CCTCAACCTCATGAGGGAGGGCATGCACAAGGAGAGAGAAAGAAAGCCCTCTCAGGCTTCCCGAGAGGGTaGAGCTGGGGGAGTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: PQPHEGGHAQGERKKALSGFPRG*SWGSLR Trigger: TCTGAGACTCCCCCAGCTCCACCCTCTCGGGAAGCC...TGAGAGGGCTTTCTTTCTCTCTCCTTGTGCATGCCCTCCCTCATGAGGTTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR TCA 90 bp | AAATGGCTGGGCCCAGGAGCCTGTGGATCACAGGTGCTGGGTGGAGCACATCCTGGTTTCCGCTTTAGCTaGAAATGCTTGACTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KWLGPGACGSQVLGGAHPGFRFS*KCLTGG Trigger: CCCACCAGTCAAGCATTTTCAGCTAAAGCGGAAACC...AGGATGTGCTCCACCCAGCACCTGTGATCCACAGGCTCCTGGGCCCAGCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAACTAGCATGGTGGTACTaGCCTGGCCGTCTGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QLYMQGFGLRAGSQARLKLAWWY*PGRLPW Trigger: CCAAGGCAGACGGCCAGGGCAGTACCACCATGCTAG...TTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR TCA 90 bp | ACAGCTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAGCTGGGGATGTAAGATaGGGCAGGTACCACACTGGG | + |
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Preference number: 4 (lower is better) Translates to: TAVYAGVWSQSRESSSPEAGDVR*GRYHTG Trigger: CCCAGTGTGGTACCTGCCTCATCTTACATCCCCAGC...TTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR TCA 90 bp | TCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCTGATGAGGAGTAGGTGTCAGAGGTaGGGTAGGTGCTGCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SAQVTQHNQQTLSSGLMRSRCQR*GRCCRC Trigger: GCACCTGCAGCACCTACCTCACCTCTGACACCTACT...CCTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR GCA 90 bp | CACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTGCTCAGGTCACTCAGCACACTTCGGAAGGGGGCTTaGTTCGGAATGCCTTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: HRCWVEHILRYLLRSLSTLRKGA*FGMPLR Trigger: TCTCAAAGGCATTCCGAAGCAAGCCCCCTTCCGAAG...TGTGCTGAGTGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | TCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCTGATGAGGTGGCGTCCTCGAAGGTaGTATTGGAGTCCGGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SAQVTQHNQQTLSSGLMRWRPRR*YWSPVP Trigger: GGGAACCGGACTCCAATACCACCTTCGAGGACGCCA...CCTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | AAGCCTAAACTCTCCAGAGAAATGGCTGGGCCCAGGAGCCTGTGGATCACAGGTAGGGCAGGTAACTTGTaGAGGGCAGTGTTGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: KPKLSREMAGPRSLWITGRAGNL*RAVLAH Trigger: GTGAGCCAACACTGCCCTCCACAAGTTACCTGCCCT...ACCTGTGATCCACAGGCTCCTGGGCCCAGCCATTTCTCTGGAGAGTTTAGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | GTAACTGTGTCTGACTCCACAACTTCCTGGGTGCCCACAGTTGCTCTACCCATTTGGCAGTGTGGGACTTaGAGCGCTGGGTTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VTVSDSTTSWVPTVALPIWQCGT*SAGFLR Trigger: CCTGAGGAACCCAGCGCTCCAAGTCCCACACTGCCA...AATGGGTAGAGCAACTGTGGGCACCCAGGAAGTTGTGGAGTCAGACACAGTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | AATAAGCCTAAACTCTCCAGAGAAATGGCTGGGCCCAGGAGCCTGTGGATCACAATGGTGGTACTGCCCTaGCCGTCTGCCTTGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: NKPKLSREMAGPRSLWITMVVLP*PSALGR Trigger: TCTGCCCAAGGCAGACGGCCAGGGCAGTACCACCAT...TGTGATCCACAGGCTCCTGGGCCCAGCCATTTCTCTGGAGAGTTTAGGCTTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | GTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAACACAGCTGTGTCCACTAGCATaGTGGTACTGCCCTGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: VYAGVWSQSRESSSPETQLCPLA*WYCPGR Trigger: ACGGCCAGGGCAGTACCACCATGCTAGTGGACACAG...CTGTGTTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | GTGGATCACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTGCTCAGGTCACTCGTGTCCACTGGCCTGTaGCGTAGTTCATCTCGAACA | + |
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Preference number: 4 (lower is better) Translates to: VDHRCWVEHILRYLLRSLVSTGL*RSSSRT Trigger: TGTTCGAGATGAACTACGCCACAGGCCAGTGGACAC...GAGTGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR TCA 90 bp | CCTCAACCTCATGAGGGAGGGCATGCACAAGGAGAGAGAAAGAAAGCCCTCTCAGAATGTCAGCAACCATaGGGACCCAGGGGTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PQPHEGGHAQGERKKALSECQQP*GPRGLS Trigger: ACTCAGACCCCTGGGTCCTCATGGTTGCTGACATTC...TGAGAGGGCTTTCTTTCTCTCTCCTTGTGCATGCCCTCCCTCATGAGGTTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR GCA 90 bp | GTGGATCACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTGCTCAGGTCACTCCCGAGTGACCTTGTTTaGCGTCTTGAACATCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: VDHRCWVEHILRYLLRSLPSDLV*RLEHLL Trigger: CAGGAGATGTTCAAGACGGCAAACAAGGTCACTCGG...GAGTGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAATGTGGAGGGCAGTGTTaGCTCACTGTTCAGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: TAVYAGVWSQSRESSSPECGGQC*LTVQRP Trigger: GGGTCTCTGAACAGTGAGCCAACACTGCCCTCCACA...TTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | ATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCTGATGAGTGTCCACTAGCATGGTaGTACTGCCCTGGCCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: ICSGHSAQPANLVLWSDECPLAW*YCPGRL Trigger: CAGACGGCCAGGGCAGTACCACCATGCTAGTGGACA...CTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR TCA 90 bp | CACATCCTTCGGTATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTTTTTTAGGTTGCTGCTaGACAGGGGCTGGAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HILRYLLRSLSTTSKPCPFLGCC*TGAGAW Trigger: CCAGGCTCCAGCCCCTGTTCAGCAGCAACCTAAAAA...AGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGATACCGAAGGATGTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR TCA 90 bp | ACAGCTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAACCTTGTTTGCCGTCTTaGACATCTCCTGGGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TAVYAGVWSQSRESSSPEPCLPS*TSPGQQ Trigger: TTGCTGCCCAGGAGATGTTCAAGACGGCAAACAAGG...TTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR GCA 90 bp | AATAAGCCTAAACTCTCCAGAGAAATGGCTGGGCCCAGGAGCCTGTGGATCACATTTCTGCAGCAGTTCTaGCCGCAGCGTGGCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: NKPKLSREMAGPRSLWITFLQQF*PQRGTL Trigger: AAGAGTGCCACGCTGCGGGCAGAACTGCTGCAGAAA...TGTGATCCACAGGCTCCTGGGCCCAGCCATTTCTCTGGAGAGTTTAGGCTTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | ATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCTGATGAGACTCCAGTGGTAGCATaGCAGATGCCTCGCACTCAC | + |
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Preference number: 4 (lower is better) Translates to: ICSGHSAQPANLVLWSDETPVVA*QMPRTH Trigger: GTGAGTGCGAGGCATCTGCCATGCTACCACTGGAGT...CTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | ATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCTGATGAGACTGTGTTGGCAGTGTaGGACTTGGAGCGCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: ICSGHSAQPANLVLWSDETVLAV*DLERWV Trigger: AACCCAGCGCTCCAAGTCCCACACTGCCAACACAGT...CTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CCA 90 bp | CTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAACACTCACTGAGCTTGATCTaGATCACATCCCCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LYMQGFGLRAGSQARLKHSLSLI*ITSPCS Trigger: GGAGCAGGGGGATGTGATCCAGATCAAGCTCAGTGA...GTGTTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| 3UTR CAA 72 bp | GTATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTaGTCCTCTGGTCTGATGAGGGTCAGCAGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: VSAQVTQHNQQT*SSGLMRVSSRD Trigger: ATCTCTGCTGCTGACCCTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR GCA 90 bp | ATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCTGATGAGGCACTTCTCTTCAGCTaGTGGGCTGTCTCGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ICSGHSAQPANLVLWSDEALLFS*WAVSVD Trigger: ATCTACCGAGACAGCCCAGCAGCTGAAGAGAAGTGC...CTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGGGAGGGCATGCACAAGGAGAGAGAAAGAAAGCCCTCTCAGCCAGTAACCCAAGTTTCTGTGTaGATACCAGGCCAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LMREGMHKERERKPSQPVTQVSV*IPGQQH Trigger: ATGCTGCTGGCCTGGTATCCACACAGAAACTTGGGT...TACTGGCTGAGAGGGCTTTCTTTCTCTCTCCTTGTGCATGCCCTCCCTCATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCTGATGAGAGTAGGAGTGACAGCTaGGGGAGTAGTAGGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICSGHSAQPANLVLWSDESRSDS*GSSRCQ Trigger: CTGACACCTACTACTCCCCCAGCTGTCACTCCTACT...CTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR GCA 90 bp | ACAACTTCCTGGGTGCCCACAGTTGCTCTACCCATTTACCAACCTTTATTTTCAGGTAGGTGCTGCAGGTaGTGGTGTAGCTGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTSWVPTVALPIYQPLFSGRCCR*WCSWAQ Trigger: CTGAGCCCAGCTACACCAGCACCTGCAGCACCTACC...TGAAAATAAAGGTTGGTAAATGGGTAGAGCAACTGTGGGCACCCAGGAAGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | CTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAACACTTCTTGTTCAGGTACTaGCACTCCAGTGGTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LYMQGFGLRAGSQARLKHFLFRY*HSSGSM Trigger: CATGCTACCACTGGAGTGCCAGTACCTGAACAAGAA...GTGTTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | GTAACTGTGTCTGACTCCACAACTTCCTGGGTGCCCACAGTTGCTCTACCCATTCTTCTCTTCAGCTGCTaGGCTGTCTCGGTAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTVSDSTTSWVPTVALPILLFSC*AVSVDF Trigger: GAAATCTACCGAGACAGCCCAGCAGCTGAAGAGAAG...AATGGGTAGAGCAACTGTGGGCACCCAGGAAGTTGTGGAGTCAGACACAGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | CTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAACACTTGTTTAAACTGTGTTaGCAGTGTGGGACTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LYMQGFGLRAGSQARLKHLFKLC*QCGTWS Trigger: GCTCCAAGTCCCACACTGCCAACACAGTTTAAACAA...GTGTTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTACAAAAGACATACAAATCCCTGGTAAATAGTGGCATCAAGGCTGGTCATGCCGAGGAGAGGCGGTaGAAGCAGAGGCGGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TVQKTYKSLVNSGIKAGHAEERR*KQRRML Trigger: TAACATCCGCCTCTGCTTCCACCGCCTCTCCTCGGC...ATGACCAGCCTTGATGCCACTATTTACCAGGGATTTGTATGTCTTTTGTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTACAAAAGACATACAAATCCCTGGTAAATAGTGGCATCAAGGCTGGTCATTCTGAGGGGCCACCATaGCCACTGGAGGTGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVQKTYKSLVNSGIKAGHSEGPP*PLEVSE Trigger: CTCAGACACCTCCAGTGGCCATGGTGGCCCCTCAGA...ATGACCAGCCTTGATGCCACTATTTACCAGGGATTTGTATGTCTTTTGTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | GTAACTGTGTCTGACTCCACAACTTCCTGGGTGCCCACAGTTGCTCTACCCATTGTCTTGAACATCTCCTaGGCAGCAAACATCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTVSDSTTSWVPTVALPIVLNIS*AANICS Trigger: AGAACAGATGTTTGCTGCCCAGGAGATGTTCAAGAC...AATGGGTAGAGCAACTGTGGGCACCCAGGAAGTTGTGGAGTCAGACACAGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCTGATGAGAGATGTCTTGAACATTaGGGTTCTGTTCCTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ICSGHSAQPANLVLWSDERCLEH*GSVPQG Trigger: ACCTTGAGGAACAGAACCCCAATGTTCAAGACATCT...CTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTACAAAAGACATACAAATCCCTGGTAAATAGTGGCATCAAGGCTGGTCATAAAATGCTTGACTGGTaGGGTGAGGGGCCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVQKTYKSLVNSGIKAGHKMLDW*GEGPSK Trigger: CTTGCTGGGCCCCTCACCCCACCAGTCAAGCATTTT...ATGACCAGCCTTGATGCCACTATTTACCAGGGATTTGTATGTCTTTTGTACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | GATGTTATCGATGACCGCGGCGGTGAGCAGGGACGCGATGCTGGGTaGCGCCCACAGCTCGTCCGTGGCGCCCAGCTTGTTGTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DVIDDRGGEQGRDAG*RPQLVRGAQLVVQP Trigger: TGGCTGCACAACAAGCTGGGCGCCACGGACGAGCTGTGGGCGCCACCCAGCATCGCGTCCCTGCTCACCGCCGCGGTCATCGATAACATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | TTGGCAGTGTGGGACTTGGAGCGCTGGGTTCCTCAGGTGGCCGGCTaGCTTCCCGAGAGGGTGGAGCTGGGGGAGTCTCAGAGCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAVWDLERWVPQVAG*LPERVELGESQSWG Trigger: TCCCCAGCTCTGAGACTCCCCCAGCTCCACCCTCTCGGGAAGCCAGCCGGCCACCTGAGGAACCCAGCGCTCCAAGTCCCACACTGCCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS GCA 90 bp | TCCATCAGAGCCGCCTTCATCTCGTCCACGGTGCGGCGCGGGAGATaGAGCGTCCCGAGCAGTAGCTTGAGCTTCACGGCCGAGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SIRAAFISSTVRRGR*SVPSSSLSFTAEER Trigger: CCTCTCCTCGGCCGTGAAGCTCAAGCTACTGCTCGGGACGCTGCATCTCCCGCGCCGCACCGTGGACGAGATGAAGGCGGCTCTGATGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | AGCGTCCCGAGCAGTAGCTTGAGCTTCACGGCCGAGGAGAGGCGGTaGAAGCAGAGGCGGATGTTATCGATGACCGCGGCGGTGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVPSSSLSFTAEERR*KQRRMLSMTAAVSR Trigger: CCTGCTCACCGCCGCGGTCATCGATAACATCCGCCTCTGCTTCCACCGCCTCTCCTCGGCCGTGAAGCTCAAGCTACTGCTCGGGACGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | AAACTGTGTTGGCAGTGTGGGACTTGGAGCGCTGGGTTCCTCAGGTaGCCGGCTGGCTTCCCGAGAGGGTGGAGCTGGGGGAGTCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLCWQCGTWSAGFLR*PAGFPRGWSWGSLR Trigger: TCTGAGACTCCCCCAGCTCCACCCTCTCGGGAAGCCAGCCGGCCACCTGAGGAACCCAGCGCTCCAAGTCCCACACTGCCAACACAGTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCAGGAGCCTGTGGATCACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTCCCTGGCCGTCTGCCTaGGGCAGATCCTCTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPGACGSQVLGGAHPSVSPWPSA*GRSSVC Trigger: ACACACAGAGGATCTGCCCAAGGCAGACGGCCAGGG...AGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCACAGGCTCCTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS TCA 90 bp | GTGGCGTCCTCGAAGGTGGTATTGGAGTCCGGTTCCCAGAAGGACTaGAGACGCTGGGTGTGGTGGGACTTCGGAAGGGGGCTTGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VASSKVVLESGSQKD*RRWVWWDFGRGLAS Trigger: CGAAGCAAGCCCCCTTCCGAAGTCCCACCACACCCAGCGTCTTCAGTCCTTCTGGGAACCGGACTCCAATACCACCTTCGAGGACGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | TCAGCAACCATGAGGACCCAGGGGTCTGAGTCCAGCGTGGCCAGCTaGATGATATCCATCAGAGCCGCCTTCATCTCGTCCACGGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SATMRTQGSESSVAS*MISIRAAFISSTVR Trigger: CCGCACCGTGGACGAGATGAAGGCGGCTCTGATGGATATCATCCAGCTGGCCACGCTGGACTCAGACCCCTGGGTCCTCATGGTTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | TGTCACCTTTGGTCCCCTCAACCTCATGAGGGAGGGCATGCACAAGGAGAGAGATCCGTGGCGCCCAGCTaGTTGTGCAGCCACAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CHLWSPQPHEGGHAQGERSVAPS*LCSHRP Trigger: CGGCCTGTGGCTGCACAACAAGCTGGGCGCCACGGA...TCTCTCTCCTTGTGCATGCCCTCCCTCATGAGGTTGAGGGGACCAAAGGTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | GTGAGGGGCCCAGCAAGGGTGGTCAGGGCATTCTTGTTCAGGTACTaGCACTCCAGTGGTAGCATGGCAGATGCCTCGCACTCACTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VRGPARVVRAFLFRY*HSSGSMADASHSLT Trigger: AGTGAGTGAGTGCGAGGCATCTGCCATGCTACCACTGGAGTGCCAGTACCTGAACAAGAATGCCCTGACCACCCTTGCTGGGCCCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | TGTAGTGTCCATCTTTCGAAGCAGCCCCCGGCCCTTAGCGTGGAATaGGACCCCAGCACTTCTCTTCAGCTGCTGGGCTGTCTCGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSVHLSKQPPALSVE*DPSTSLQLLGCLGR Trigger: TCTACCGAGACAGCCCAGCAGCTGAAGAGAAGTGCTGGGGTCCCATTCCACGCTAAGGGCCGGGGGCTGCTTCGAAAGATGGACACTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | CCGTCTGCCTTGGGCAGATCCTCTGTGTGTTCACTGAGCTTGATCTaGATCACATCCCCCTGCTCCGGGCATGGGTTCTCTCGAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSALGRSSVCSLSLI*ITSPCSGHGFSREP Trigger: TGGCTCTCGAGAGAACCCATGCCCGGAGCAGGGGGATGTGATCCAGATCAAGCTCAGTGAACACACAGAGGATCTGCCCAAGGCAGACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS GCA 90 bp | AGATCCTCTGTGTGTTCACTGAGCTTGATCTGGATCACATCCCCCTaGTCCGGGCATGGGTTCTCTCGAGAGCCAGCCATGAAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSVCSLSLIWITSP*SGHGFSREPAMKPR Trigger: CCTGGGCTTCATGGCTGGCTCTCGAGAGAACCCATGCCCGGAGCAGGGGGATGTGATCCAGATCAAGCTCAGTGAACACACAGAGGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | CTTCACACCCCTTTCTTTCTGCAGTGGCGTCCTCGAAGGTGGTATTaGAGTCCGGTTCCCAGAAGGACTGAAGACGCTGGGTGTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LHTPFFLQWRPRRWY*SPVPRRTEDAGCGG Trigger: CCCACCACACCCAGCGTCTTCAGTCCTTCTGGGAACCGGACTCCAATACCACCTTCGAGGACGCCACTGCAGAAAGAAAGGGGTGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | GGCCTGTGGCGTAGTTCATCTCGAACACTGTGTCCACTAGCATGGTaGTACTGCCCTGGCCGTCTGCCTTGGGCAGATCCTCTGTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLWRSSSRTLCPLAW*YCPGRLPWADPLCV Trigger: AACACACAGAGGATCTGCCCAAGGCAGACGGCCAGGGCAGTACCACCATGCTAGTGGACACAGTGTTCGAGATGAACTACGCCACAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | ACTGGCCTGTGGCGTAGTTCATCTCGAACACTGTGTCCACTAGCATaGTGGTACTGCCCTGGCCGTCTGCCTTGGGCAGATCCTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGLWRSSSRTLCPLA*WYCPGRLPWADPLC Trigger: ACACAGAGGATCTGCCCAAGGCAGACGGCCAGGGCAGTACCACCATGCTAGTGGACACAGTGTTCGAGATGAACTACGCCACAGGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS TCA 90 bp | AGGGAAGGACTTCAGAATGTCAGCAACCATGAGGACCCAGGGGTCTaGGTCCAGCGTGGCCAGCTGGATGATATCCATCAGAGCCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: REGLQNVSNHEDPGV*VQRGQLDDIHQSRL Trigger: AAGGCGGCTCTGATGGATATCATCCAGCTGGCCACGCTGGACTCAGACCCCTGGGTCCTCATGGTTGCTGACATTCTGAAGTCCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS GCA 90 bp | ACCCCAGCACTTCTCTTCAGCTGCTGGGCTGTCTCGGTAGATTTCTaGAGCAGTTCTGCCCGCAGCGTGGCACTCTTAGGTTTCCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPALLFSCWAVSVDF*SSSARSVALLGFRF Trigger: AAAGCGGAAACCTAAGAGTGCCACGCTGCGGGCAGAACTGCTGCAGAAATCTACCGAGACAGCCCAGCAGCTGAAGAGAAGTGCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | CAGCAGCTTCACACCCCTTTCTTTCTGCAGTGGCGTCCTCGAAGGTaGTATTGGAGTCCGGTTCCCAGAAGGACTGAAGACGCTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QQLHTPFFLQWRPRR*YWSPVPRRTEDAGC Trigger: ACACCCAGCGTCTTCAGTCCTTCTGGGAACCGGACTCCAATACCACCTTCGAGGACGCCACTGCAGAAAGAAAGGGGTGTGAAGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTGCTCAGGTCACTCAGCACAGTGGTCAGGGCATTCTaGTTCAGGTACTGGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRCWVEHILRYLLRSLSTVVRAF*FRYWHS Trigger: GGAGTGCCAGTACCTGAACAAGAATGCCCTGACCAC...TGTGCTGAGTGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS GCA 90 bp | GAAGGACTGAAGACGCTGGGTGTGGTGGGACTTCGGAAGGGGGCTTaGTTCGGAATGCCTTTGAGAGGGGTTGTAGTGTCCATCTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: EGLKTLGVVGLRKGA*FGMPLRGVVVSIFR Trigger: TCGAAAGATGGACACTACAACCCCTCTCAAAGGCATTCCGAAGCAAGCCCCCTTCCGAAGTCCCACCACACCCAGCGTCTTCAGTCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | GCTCAGGCCACTGTTATACATAGGTGCCCTTTGTTTAAACTGTGTTaGCAGTGTGGGACTTGGAGCGCTGGGTTCCTCAGGTGGCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AQATVIHRCPLFKLC*QCGTWSAGFLRWPA Trigger: AGCCGGCCACCTGAGGAACCCAGCGCTCCAAGTCCCACACTGCCAACACAGTTTAAACAAAGGGCACCTATGTATAACAGTGGCCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS GCA 90 bp | CATGAAGCCCAGGATGAGGGCCTTCTCCGGCCGAGTGACCTTGTTTaGCGTCTTGAACATCTCCTGGGCAGCAAACATCTGTTCTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HEAQDEGLLRPSDLV*RLEHLLGSKHLFSS Trigger: ACTAGAGAACAGATGTTTGCTGCCCAGGAGATGTTCAAGACGGCAAACAAGGTCACTCGGCCGGAGAAGGCCCTCATCCTGGGCTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATCACAGGTGCTGGGTGGAGCACATCCTTCGGTATCTGCTCAGGTCACTCACAACCGTCTCTTCCTaGGTGGGCTTTTCTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: VDHRCWVEHILRYLLRSLTTVSS*VGFSTT Trigger: AGTGGTAGAAAAGCCCACCAAGGAAGAGACGGTTGT...GAGTGACCTGAGCAGATACCGAAGGATGTGCTCCACCCAGCACCTGTGATCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCTAAACTCTCCAGAGAAATGGCTGGGCCCAGGAGCCTGTGGATCACAGGTACCTTGTTTGCCGTCTaGAACATCTCCTGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KPKLSREMAGPRSLWITGTLFAV*NISWAA Trigger: TGCTGCCCAGGAGATGTTCAAGACGGCAAACAAGGT...ACCTGTGATCCACAGGCTCCTGGGCCCAGCCATTTCTCTGGAGAGTTTAGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAACCTCATGAGGGAGGGCATGCACAAGGAGAGAGAAAGAAAGCCCTCTCATCCGGCCGAGTGACCTaGTTTGCCGTCTTGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: PQPHEGGHAQGERKKALSSGRVT*FAVLNI Trigger: GATGTTCAAGACGGCAAACAAGGTCACTCGGCCGGA...TGAGAGGGCTTTCTTTCTCTCTCCTTGTGCATGCCCTCCCTCATGAGGTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | CAGCTCAGAAATATCCAGCAGCTTCACACCCCTTTCTTTCTGCAGTaGCGTCCTCGAAGGTGGTATTGGAGTCCGGTTCCCAGAAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: QLRNIQQLHTPFFLQ*RPRRWYWSPVPRRT Trigger: AGTCCTTCTGGGAACCGGACTCCAATACCACCTTCGAGGACGCCACTGCAGAAAGAAAGGGGTGTGAAGCTGCTGGATATTTCTGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | CACATCCTTCGGTATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTTTGTGGAGGGCAGTGTaGGCTCACTGTTCAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: HILRYLLRSLSTTSKPCPLWRAV*AHCSET Trigger: GGTCTCTGAACAGTGAGCCAACACTGCCCTCCACAA...AGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGATACCGAAGGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTGTATATGCAGGGGTTTGGTCTCAGAGCAGGGAGTCAAGCTCGCCTGAAAGTGTGTTCACTGAGCTaGATCTGGATCACATCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QLYMQGFGLRAGSQARLKVCSLS*IWITSP Trigger: GGGGGATGTGATCCAGATCAAGCTCAGTGAACACAC...TTTCAGGCGAGCTTGACTCCCTGCTCTGAGACCAAACCCCTGCATATACAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | CACATCCTTCGGTATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTTGCTTCGGAATGCCTTaGAGAGGGGTTGTAGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HILRYLLRSLSTTSKPCPCFGMP*RGVVVS Trigger: GGACACTACAACCCCTCTCAAAGGCATTCCGAAGCA...AGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGATACCGAAGGATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS GCA 90 bp | GTATTCAGCTCAGAAATATCCAGCAGCTTCACACCCCTTTCTTTCTaGAGTGGCGTCCTCGAAGGTGGTATTGGAGTCCGGTTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFSSEISSSFTPLSF*SGVLEGGIGVRFPE Trigger: TTCTGGGAACCGGACTCCAATACCACCTTCGAGGACGCCACTGCAGAAAGAAAGGGGTGTGAAGCTGCTGGATATTTCTGAGCTGAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 90 bp | GCCTTCTCCGGCCGAGTGACCTTGTTTGCCGTCTTGAACATCTCCTaGGCAGCAAACATCTGTTCTCTAGTGAGGGACAGGTTCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AFSGRVTLFAVLNIS*AANICSLVRDRFFL Trigger: TAAAAAGAACCTGTCCCTCACTAGAGAACAGATGTTTGCTGCCCAGGAGATGTTCAAGACGGCAAACAAGGTCACTCGGCCGGAGAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | AACTTCCTGGGTGCCCACAGTTGCTCTACCCATTTACCAACCTTTATTTTCAGGACTTCGGAAGGGGGCTaGCTTCGGAATGCCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NFLGAHSCSTHLPTFIFRTSEGG*LRNAFE Trigger: CTCAAAGGCATTCCGAAGCAAGCCCCCTTCCGAAGT...CCTGAAAATAAAGGTTGGTAAATGGGTAGAGCAACTGTGGGCACCCAGGAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTCTGGTCTGATGAGGACATTGGTCATAGGCTaGTACTTCTTGAAGCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAQVTQHNQQTLSSGLMRTLVIG*YFLKRV Trigger: GACACGCTTCAAGAAGTACAAGCCTATGACCAATGT...CCTCATCAGACCAGAGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CAA 90 bp | CACATCCTTCGGTATCTGCTCAGGTCACTCAGCACAACCAGCAAACCTTGTCCTATACATAGGTGCCCTTaGTTTAAACTGTGTTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HILRYLLRSLSTTSKPCPIHRCP*FKLCWQ Trigger: CTGCCAACACAGTTTAAACAAAGGGCACCTATGTAT...AGGACAAGGTTTGCTGGTTGTGCTGAGTGACCTGAGCAGATACCGAAGGATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS-3UTR CAA 90 bp | ACAACTTCCTGGGTGCCCACAGTTGCTCTACCCATTTACCAACCTTTATTTTCAATAGGCTTGTACTTCTaGAAGCGTGTCCACTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TTSWVPTVALPIYQPLFSIGLYF*KRVHWP Trigger: AGGCCAGTGGACACGCTTCAAGAAGTACAAGCCTAT...TGAAAATAAAGGTTGGTAAATGGGTAGAGCAACTGTGGGCACCCAGGAAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | GATGACCGCGGCGGTGAGCAGGGACGCGATGCTGGGTaGCGCCCACAGCTCGTCCGTGGCGCCCAGCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: DDRGGEQGRDAG*RPQLVRGAQLV Trigger: AACAAGCTGGGCGCCACGGACGAGCTGTGGGCGCCACCCAGCATCGCGTCCCTGCTCACCGCCGCGGTCATC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | TGGCAGTGTGGGACTTGGAGCGCTGGGTTCCTCAGGTaGCCGGCTGGCTTCCCGAGAGGGTGGAGCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WQCGTWSAGFLR*PAGFPRGWSWG Trigger: CCCCCAGCTCCACCCTCTCGGGAAGCCAGCCGGCCACCTGAGGAACCCAGCGCTCCAAGTCCCACACTGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 72 bp | CTGGGTGGCGCCCACAGCTCGTCCGTGGCGCCCAGCTaGTTGTGCAGCCACAGGCCGGTGTCACTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGGAHSSSVAPS*LCSHRPVSLSL Trigger: GAGGGAGAGTGACACCGGCCTGTGGCTGCACAACAAGCTGGGCGCCACGGACGAGCTGTGGGCGCCACCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 90 bp | GACGCGATGCTGGGTGGCGCCCACAGCTCGTCCGTGGCGCCCAGCTaGTTGTGCAGCCACAGGCCGGTGTCACTCTCCCTCATGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DAMLGGAHSSSVAPS*LCSHRPVSLSLMEA Trigger: GGCTTCCATGAGGGAGAGTGACACCGGCCTGTGGCTGCACAACAAGCTGGGCGCCACGGACGAGCTGTGGGCGCCACCCAGCATCGCGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS GCA 72 bp | GCCGCCTTCATCTCGTCCACGGTGCGGCGCGGGAGATaGAGCGTCCCGAGCAGTAGCTTGAGCTTCACGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAFISSTVRRGR*SVPSSSLSFTA Trigger: GGCCGTGAAGCTCAAGCTACTGCTCGGGACGCTGCATCTCCCGCGCCGCACCGTGGACGAGATGAAGGCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 72 bp | GTGCGGCGCGGGAGATGCAGCGTCCCGAGCAGTAGCTaGAGCTTCACGGCCGAGGAGAGGCGGTGGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VRRGRCSVPSSS*SFTAEERRWKQ Trigger: CTGCTTCCACCGCCTCTCCTCGGCCGTGAAGCTCAAGCTACTGCTCGGGACGCTGCATCTCCCGCGCCGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS TCA 72 bp | TGCGGCGCGGGAGATGCAGCGTCCCGAGCAGTAGCTTaGGCTTCACGGCCGAGGAGAGGCGGTGGAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CGAGDAASRAVA*ASRPRRGGGSR Trigger: TCTGCTTCCACCGCCTCTCCTCGGCCGTGAAGCTCAAGCTACTGCTCGGGACGCTGCATCTCCCGCGCCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS GCA 72 bp | GGCGCCCACAGCTCGTCCGTGGCGCCCAGCTTGTTGTaGAGCCACAGGCCGGTGTCACTCTCCCTCATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GAHSSSVAPSLL*SHRPVSLSLME Trigger: TTCCATGAGGGAGAGTGACACCGGCCTGTGGCTGCACAACAAGCTGGGCGCCACGGACGAGCTGTGGGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS TCA 72 bp | GGACCCAGGGGTCTGAGTCCAGCGTGGCCAGCTGGATaGTATCCATCAGAGCCGCCTTCATCTCGTCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: GPRGLSPAWPAG*YPSEPPSSRPR Trigger: CCGTGGACGAGATGAAGGCGGCTCTGATGGATATCATCCAGCTGGCCACGCTGGACTCAGACCCCTGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | CATCTTTCGAAGCAGCCCCCGGCCCTTAGCGTGGAATaGGACCCCAGCACTTCTCTTCAGCTGCTGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HLSKQPPALSVE*DPSTSLQLLGC Trigger: ACAGCCCAGCAGCTGAAGAGAAGTGCTGGGGTCCCATTCCACGCTAAGGGCCGGGGGCTGCTTCGAAAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | GTGTCCATCTTTCGAAGCAGCCCCCGGCCCTTAGCGTaGAATGGGACCCCAGCACTTCTCTTCAGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSIFRSSPRPLA*NGTPALLFSCW Trigger: CCAGCAGCTGAAGAGAAGTGCTGGGGTCCCATTCCACGCTAAGGGCCGGGGGCTGCTTCGAAAGATGGACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | CTTCCCGAGAGGGTGGAGCTGGGGGAGTCTCAGAGCTaGGGATGTAAGATGAGGCAGGTACCACACTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPERVELGESQS*GCKMRQVPHWV Trigger: CACCCAGTGTGGTACCTGCCTCATCTTACATCCCCAGCTCTGAGACTCCCCCAGCTCCACCCTCTCGGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 72 bp | GGGGTGAGGGGCCCAGCAAGGGTGGTCAGGGCATTCTaGTTCAGGTACTGGCACTCCAGTGGTAGCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GVRGPARVVRAF*FRYWHSSGSMA Trigger: TGCCATGCTACCACTGGAGTGCCAGTACCTGAACAAGAATGCCCTGACCACCCTTGCTGGGCCCCTCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 90 bp | CCCTGGCCGTCTGCCTTGGGCAGATCCTCTGTGTGTTCACTGAGCTaGATCTGGATCACATCCCCCTGCTCCGGGCATGGGTTCTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PWPSALGRSSVCSLS*IWITSPCSGHGFSR Trigger: TCGAGAGAACCCATGCCCGGAGCAGGGGGATGTGATCCAGATCAAGCTCAGTGAACACACAGAGGATCTGCCCAAGGCAGACGGCCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS TCA 72 bp | TCGAAGGTGGTATTGGAGTCCGGTTCCCAGAAGGACTaGAGACGCTGGGTGTGGTGGGACTTCGGAAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SKVVLESGSQKD*RRWVWWDFGRG Trigger: CCCCCTTCCGAAGTCCCACCACACCCAGCGTCTTCAGTCCTTCTGGGAACCGGACTCCAATACCACCTTCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | ATGAGGACCCAGGGGTCTGAGTCCAGCGTGGCCAGCTaGATGATATCCATCAGAGCCGCCTTCATCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MRTQGSESSVAS*MISIRAAFISS Trigger: GGACGAGATGAAGGCGGCTCTGATGGATATCATCCAGCTGGCCACGCTGGACTCAGACCCCTGGGTCCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS GCA 72 bp | AAGACGCTGGGTGTGGTGGGACTTCGGAAGGGGGCTTaGTTCGGAATGCCTTTGAGAGGGGTTGTAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KTLGVVGLRKGA*FGMPLRGVVVS Trigger: GGACACTACAACCCCTCTCAAAGGCATTCCGAAGCAAGCCCCCTTCCGAAGTCCCACCACACCCAGCGTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS GCA 72 bp | GTGTGTTCACTGAGCTTGATCTGGATCACATCCCCCTaGTCCGGGCATGGGTTCTCTCGAGAGCCAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: VCSLSLIWITSP*SGHGFSREPAM Trigger: CATGGCTGGCTCTCGAGAGAACCCATGCCCGGAGCAGGGGGATGTGATCCAGATCAAGCTCAGTGAACACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | CCAGCAAGGGTGGTCAGGGCATTCTTGTTCAGGTACTaGCACTCCAGTGGTAGCATGGCAGATGCCTCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PARVVRAFLFRY*HSSGSMADASH Trigger: GTGCGAGGCATCTGCCATGCTACCACTGGAGTGCCAGTACCTGAACAAGAATGCCCTGACCACCCTTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | GCGTGGAATGGGACCCCAGCACTTCTCTTCAGCTGCTaGGCTGTCTCGGTAGATTTCTGCAGCAGTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AWNGTPALLFSC*AVSVDFCSSSA Trigger: GGCAGAACTGCTGCAGAAATCTACCGAGACAGCCCAGCAGCTGAAGAGAAGTGCTGGGGTCCCATTCCACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | TGCCCTTTGTTTAAACTGTGTTGGCAGTGTGGGACTTaGAGCGCTGGGTTCCTCAGGTGGCCGGCTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CPLFKLCWQCGT*SAGFLRWPAGF Trigger: GAAGCCAGCCGGCCACCTGAGGAACCCAGCGCTCCAAGTCCCACACTGCCAACACAGTTTAAACAAAGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 72 bp | GAAGACGCTGGGTGTGGTGGGACTTCGGAAGGGGGCTaGCTTCGGAATGCCTTTGAGAGGGGTTGTAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EDAGCGGTSEGG*LRNAFERGCSV Trigger: GACACTACAACCCCTCTCAAAGGCATTCCGAAGCAAGCCCCCTTCCGAAGTCCCACCACACCCAGCGTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 72 bp | AAGCCCAGGATGAGGGCCTTCTCCGGCCGAGTGACCTaGTTTGCCGTCTTGAACATCTCCTGGGCAGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: KPRMRAFSGRVT*FAVLNISWAAN Trigger: GTTTGCTGCCCAGGAGATGTTCAAGACGGCAAACAAGGTCACTCGGCCGGAGAAGGCCCTCATCCTGGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 72 bp | TCTGCCTTGGGCAGATCCTCTGTGTGTTCACTGAGCTaGATCTGGATCACATCCCCCTGCTCCGGGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SALGRSSVCSLS*IWITSPCSGHG Trigger: CCCATGCCCGGAGCAGGGGGATGTGATCCAGATCAAGCTCAGTGAACACACAGAGGATCTGCCCAAGGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 90 bp | CCCAGGATGAGGGCCTTCTCCGGCCGAGTGACCTTGTTTGCCGTCTaGAACATCTCCTGGGCAGCAAACATCTGTTCTCTAGTGAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRMRAFSGRVTLFAV*NISWAANICSLVRD Trigger: GTCCCTCACTAGAGAACAGATGTTTGCTGCCCAGGAGATGTTCAAGACGGCAAACAAGGTCACTCGGCCGGAGAAGGCCCTCATCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 90 bp | CCAGCCATGAAGCCCAGGATGAGGGCCTTCTCCGGCCGAGTGACCTaGTTTGCCGTCTTGAACATCTCCTGGGCAGCAAACATCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PAMKPRMRAFSGRVT*FAVLNISWAANICS Trigger: AGAACAGATGTTTGCTGCCCAGGAGATGTTCAAGACGGCAAACAAGGTCACTCGGCCGGAGAAGGCCCTCATCCTGGGCTTCATGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS GCA 72 bp | CAGGATGAGGGCCTTCTCCGGCCGAGTGACCTTGTTTaGCGTCTTGAACATCTCCTGGGCAGCAAACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: QDEGLLRPSDLV*RLEHLLGSKHL Trigger: CAGATGTTTGCTGCCCAGGAGATGTTCAAGACGGCAAACAAGGTCACTCGGCCGGAGAAGGCCCTCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | CCTTTCTTTCTGCAGTGGCGTCCTCGAAGGTGGTATTaGAGTCCGGTTCCCAGAAGGACTGAAGACGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PFFLQWRPRRWY*SPVPRRTEDAG Trigger: CCCAGCGTCTTCAGTCCTTCTGGGAACCGGACTCCAATACCACCTTCGAGGACGCCACTGCAGAAAGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | TCGAACACTGTGTCCACTAGCATGGTGGTACTGCCCTaGCCGTCTGCCTTGGGCAGATCCTCTGTGTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SNTVSTSMVVLP*PSALGRSSVCS Trigger: TGAACACACAGAGGATCTGCCCAAGGCAGACGGCCAGGGCAGTACCACCATGCTAGTGGACACAGTGTTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | CGTAGTTCATCTCGAACACTGTGTCCACTAGCATGGTaGTACTGCCCTGGCCGTCTGCCTTGGGCAGATCCT | + |
|
Preference number: 6 (lower is better) Translates to: RSSSRTLCPLAW*YCPGRLPWADP Trigger: AGGATCTGCCCAAGGCAGACGGCCAGGGCAGTACCACCATGCTAGTGGACACAGTGTTCGAGATGAACTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | TGGCGTAGTTCATCTCGAACACTGTGTCCACTAGCATaGTGGTACTGCCCTGGCCGTCTGCCTTGGGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: WRSSSRTLCPLA*WYCPGRLPWAD Trigger: ATCTGCCCAAGGCAGACGGCCAGGGCAGTACCACCATGCTAGTGGACACAGTGTTCGAGATGAACTACGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 72 bp | TCCACTAGCATGGTGGTACTGCCCTGGCCGTCTGCCTaGGGCAGATCCTCTGTGTGTTCACTGAGCTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: STSMVVLPWPSA*GRSSVCSLSLI Trigger: GATCAAGCTCAGTGAACACACAGAGGATCTGCCCAAGGCAGACGGCCAGGGCAGTACCACCATGCTAGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 90 bp | AGAAGGACTGAAGACGCTGGGTGTGGTGGGACTTCGGAAGGGGGCTaGCTTCGGAATGCCTTTGAGAGGGGTTGTAGTGTCCATCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RRTEDAGCGGTSEGG*LRNAFERGCSVHLS Trigger: CGAAAGATGGACACTACAACCCCTCTCAAAGGCATTCCGAAGCAAGCCCCCTTCCGAAGTCCCACCACACCCAGCGTCTTCAGTCCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS TCA 72 bp | CTTCAGAATGTCAGCAACCATGAGGACCCAGGGGTCTaGGTCCAGCGTGGCCAGCTGGATGATATCCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQNVSNHEDPGV*VQRGQLDDIHQ Trigger: CTGATGGATATCATCCAGCTGGCCACGCTGGACTCAGACCCCTGGGTCCTCATGGTTGCTGACATTCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | CACACCCCTTTCTTTCTGCAGTGGCGTCCTCGAAGGTaGTATTGGAGTCCGGTTCCCAGAAGGACTGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HTPFFLQWRPRR*YWSPVPRRTED Trigger: GTCTTCAGTCCTTCTGGGAACCGGACTCCAATACCACCTTCGAGGACGCCACTGCAGAAAGAAAGGGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | TTGGGCAGATCCTCTGTGTGTTCACTGAGCTTGATCTaGATCACATCCCCCTGCTCCGGGCATGGGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGRSSVCSLSLI*ITSPCSGHGFS Trigger: AGAGAACCCATGCCCGGAGCAGGGGGATGTGATCCAGATCAAGCTCAGTGAACACACAGAGGATCTGCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 90 bp | AACACTGTGTCCACTAGCATGGTGGTACTGCCCTGGCCGTCTGCCTaGGGCAGATCCTCTGTGTGTTCACTGAGCTTGATCTGGATCACA | + |
|
Preference number: 6 (lower is better) Translates to: NTVSTSMVVLPWPSA*GRSSVCSLSLIWIT Trigger: TGTGATCCAGATCAAGCTCAGTGAACACACAGAGGATCTGCCCAAGGCAGACGGCCAGGGCAGTACCACCATGCTAGTGGACACAGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | AATATCCAGCAGCTTCACACCCCTTTCTTTCTGCAGTaGCGTCCTCGAAGGTGGTATTGGAGTCCGGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: NIQQLHTPFFLQ*RPRRWYWSPVP Trigger: GGGAACCGGACTCCAATACCACCTTCGAGGACGCCACTGCAGAAAGAAAGGGGTGTGAAGCTGCTGGATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | GGGTGTAGAGGGCAGGTAACTTGTGGAGGGCAGTGTTaGCTCACTGTTCAGAGACCCAAGTTTCTGTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GCRGQVTCGGQC*LTVQRPKFLCG Trigger: TCCACACAGAAACTTGGGTCTCTGAACAGTGAGCCAACACTGCCCTCCACAAGTTACCTGCCCTCTACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CCA 72 bp | GGCCGAGTGACCTTGTTTGCCGTCTTGAACATCTCCTaGGCAGCAAACATCTGTTCTCTAGTGAGGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRVTLFAVLNIS*AANICSLVRDR Trigger: CCTGTCCCTCACTAGAGAACAGATGTTTGCTGCCCAGGAGATGTTCAAGACGGCAAACAAGGTCACTCGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 90 bp | TGCTGGTGTAGCTGGGCTCAGGCCACTGTTATACATAGGTGCCCTTaGTTTAAACTGTGTTGGCAGTGTGGGACTTGGAGCGCTGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CWCSWAQATVIHRCP*FKLCWQCGTWSAGF Trigger: GAACCCAGCGCTCCAAGTCCCACACTGCCAACACAGTTTAAACAAAGGGCACCTATGTATAACAGTGGCCTGAGCCCAGCTACACCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS GCA 72 bp | TCAGAAATATCCAGCAGCTTCACACCCCTTTCTTTCTaGAGTGGCGTCCTCGAAGGTGGTATTGGAGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SEISSSFTPLSF*SGVLEGGIGVR Trigger: CCGGACTCCAATACCACCTTCGAGGACGCCACTGCAGAAAGAAAGGGGTGTGAAGCTGCTGGATATTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CAA 72 bp | AGCTGGGCTCAGGCCACTGTTATACATAGGTGCCCTTaGTTTAAACTGTGTTGGCAGTGTGGGACTTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SWAQATVIHRCP*FKLCWQCGTWS Trigger: GCTCCAAGTCCCACACTGCCAACACAGTTTAAACAAAGGGCACCTATGTATAACAGTGGCCTGAGCCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
||
| CDS CCA 72 bp | ACTGTTATACATAGGTGCCCTTTGTTTAAACTGTGTTaGCAGTGTGGGACTTGGAGCGCTGGGTTCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVIHRCPLFKLC*QCGTWSAGFLR Trigger: CCTGAGGAACCCAGCGCTCCAAGTCCCACACTGCCAACACAGTTTAAACAAAGGGCACCTATGTATAACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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| CDS CAA 90 bp | TGGGCTTTTCTACCACTTCTGTGTCTAAAGTCTTCCTCCTCCTCTTaGCCTCTCGTCCAGCACCAACTGTATTCAGCTCAGAAATATCCA | + |
|
Preference number: 6 (lower is better) Translates to: WAFLPLLCLKSSSSS*PLVQHQLYSAQKYP Trigger: TGGATATTTCTGAGCTGAATACAGTTGGTGCTGGACGAGAGGCAAAGAGGAGGAGGAAGACTTTAGACACAGAAGTGGTAGAAAAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030993.8 |
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