Pregenerated sensors for NEK8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017405Ensembl transcript IDs: ENSMUST00000017549.13, ENSMUST00000148154.3
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCAGTCCAAACAAGCCCTGGCTTGCCCTATTCCAAAGCATGGCATaGGTCTCCAAGAGGACACCGTCAGGGACTTACTTTCTAACTGGG | + |
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Preference number: 1 (lower is better) Translates to: TSPNKPWLALFQSMA*VSKRTPSGTYFLTG Trigger: CCCAGTTAGAAAGTAAGTCCCTGACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGCTTGTTTGGACTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR CCA 90 bp | AAGAGCTTTGGAGACAGGGACTTGGGGGAACAGAGTAGACTTCACTaGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAAC | + |
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Preference number: 1 (lower is better) Translates to: KSFGDRDLGEQSRLH*PFYPIDDTIQDADN Trigger: GTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCAGTGAAGTCTACTCTGTTCCCCCAAGTCCCTGTCTCCAAAGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCGACTTACTTTCTAACTaGGCTGAGGGTGGTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ALACPIPKHGMSLQEDTVDLLSN*AEGGWR Trigger: TCTCCAACCACCCTCAGCCCAGTTAGAAAGTAAGTC...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR-3UTR CCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGTTGGAGACAGGGACTTaGGGGAACAGAGTAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: GRPSVDPCQTGALQIFTKLETGT*GNRVDF Trigger: GAAGTCTACTCTGTTCCCCCAAGTCCCTGTCTCCAA...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR-3UTR CCA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTaGTCTCTTGGATCATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: DDTIQDADNSHSSGTCIFQNTQR*SLGSSC Trigger: ACAGGATGATCCAAGAGACCACCTTTGAGTATTCTG...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCAAGGCCGTCCTTCTGTaGACCCCTGCCAGACTGGAG | + |
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Preference number: 3 (lower is better) Translates to: ALACPIPKHGMSLQEDTVKAVLL*TPARLE Trigger: CTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTT...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCGGCCTTTCTACCCCATaGACGACACAATCCAGGACG | + |
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Preference number: 3 (lower is better) Translates to: ALACPIPKHGMSLQEDTVGLSTP*TTQSRT Trigger: CGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCC...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR CCA 72 bp | GGAGACAGGGACTTGGGGGAACAGAGTAGACTTCACTaGCCTTTCTACCCCATTGACGACACAATCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: GDRDLGEQSRLH*PFYPIDDTIQD Trigger: GTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCAGTGAAGTCTACTCTGTTCCCCCAAGTCCCTGTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR CCA 72 bp | GTCCAAACAAGCCCTGGCTTGCCCTATTCCAAAGCATaGCATGAGTCTCCAAGAGGACACCGTCAGGGACTT | + |
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Preference number: 3 (lower is better) Translates to: VQTSPGLPYSKA*HESPRGHRQGL Trigger: AAGTCCCTGACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGCTTGTTTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR-3UTR CAA 90 bp | TTTGAAGGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTTTTGGAGACAGGGACTaGGGGGAACAGAGTAGACTT | + |
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Preference number: 3 (lower is better) Translates to: FEGRPSVDPCQTGALQIFFGDRD*GEQSRL Trigger: AAGTCTACTCTGTTCCCCCAAGTCCCTGTCTCCAAA...AAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR TCA 72 bp | AACAAGCCCTGGCTTGCCCTATTCCAAAGCATGGCATaGGTCTCCAAGAGGACACCGTCAGGGACTTACTTT | + |
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Preference number: 3 (lower is better) Translates to: NKPWLALFQSMA*VSKRTPSGTYF Trigger: AAAGTAAGTCCCTGACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGCTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR GCA 72 bp | ATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTaGATTTTTCAGAATACTCAAAGGTGGTCTCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: IQDADNSHSSGT*IFQNTQRWSLG Trigger: TCCAAGAGACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| 3UTR GCA 72 bp | AGCAAAGGTTTTGAAGGCCGTCCTTCTGTTGACCCCTaGCAGACTGGAGCCTTGCAGATATTTACTAAGATA | + |
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Preference number: 3 (lower is better) Translates to: SKGFEGRPSVDP*QTGALQIFTKI Trigger: TATCTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAAACCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCTCCAGCTCCCAGGGGTaGGGCCTCCCACAGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: ALACPIPKHGMSLQEDTVSSSQG*GLPQDE Trigger: CTCATCCTGTGGGAGGCCCCACCCCTGGGAGCTGGA...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTGACAGGGCCAGCACATaGGAGGCCCCACAGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: FEGRPSVDPCQTGALQIFDRAST*EAPQAT Trigger: GGTGGCCTGTGGGGCCTCTCATGTGCTGGCCCTGTC...AAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCTCCCCGCAGGCCACATaGTTGATGGTCACACCTGAC | + |
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Preference number: 4 (lower is better) Translates to: ALACPIPKHGMSLQEDTVSPQAT*LMVTPD Trigger: GTCAGGTGTGACCATCAAGCATGTGGCCTGCGGGGA...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | TGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTCATTCCTTGGACCCGACAGGGTaGCCTGCTGACCCTGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: WPFYPIDDTIQDADNSHSLDPTG*PADPAG Trigger: TCCCGCAGGGTCAGCAGGGCACCCTGTCGGGTCCAA...GGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCCCTACATCGGGCACTaGTGGCCCTGCTCCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: DDTIQDADNSHSSGTCIFPYIGH*WPCSLC Trigger: GCACAGGGAGCAGGGCCACCAGTGCCCGATGTAGGG...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCCCACTGGGATCTGCTTaGGGATCACCAGCTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ALACPIPKHGMSLQEDTVPLGSA*GSPASG Trigger: ACCAGAAGCTGGTGATCCTCAAGCAGATCCCAGTGG...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | TGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTCATTCCGAGACAAACTGGGGCTaGGGCAGCTCCACGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: WPFYPIDDTIQDADNSHSETNWG*GSSTAP Trigger: TGGAGCCGTGGAGCTGCCTCAGCCCCAGTTTGTCTC...GGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTCAGAGCCCAGTGGTGTaGAGCTCAGGGCCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FEGRPSVDPCQTGALQIFQSPVV*SSGPPP Trigger: TGGAGGAGGCCCTGAGCTTCACACCACTGGGCTCTG...AAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCTCTGGTTGTAGGGTTTaGCCTCACACAGCTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: ALACPIPKHGMSLQEDTVSGCRV*PHTAQG Trigger: CCCCTGAGCTGTGTGAGGGCAAACCCTACAACCAGA...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATGGGCACTGGTGGCCCTaGTCCCTGTGCTGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TIQDADNSHSSGTCIFQNGHWWP*SLCCQR Trigger: CCTCTGGCAGCACAGGGAGCAGGGCCACCAGTGCCC...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCGGCCTCGGGTTCCTTTaGCCCAAGAATACACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ALACPIPKHGMSLQEDTVGLGFL*PKNTLP Trigger: GGGAAGTGTATTCTTGGGGCAAAGGAACCCGAGGCC...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTAGCAGCTTGAGCACCTaGCACTCGTTCTGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: FEGRPSVDPCQTGALQIFSSLST*HSFWAA Trigger: GGCGGCCCAGAACGAGTGCCAGGTGCTCAAGCTGCT...AAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCCTTCAGCACCAGGGCTaGCAAGTTTGCAGCCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: ALACPIPKHGMSLQEDTVLQHQG*QVCSLE Trigger: TTCGAGGCTGCAAACTTGCCAGCCCTGGTGCTGAAG...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGGATGTGGCTGAGGGGTaGCCTCTGTGCAGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GRPSVDPCQTGALQIFTKDVAEG*PLCRFQ Trigger: CTGGAACCTGCACAGAGGCCACCCCTCAGCCACATC...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGGGCCAGGACCCTGCCTaGAGAGGTGAGGATCATGGA | + |
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Preference number: 4 (lower is better) Translates to: GRPSVDPCQTGALQIFTKGQDPA*RGEDHG Trigger: TCCATGATCCTCACCTCTCCAGGCAGGGTCCTGGCC...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCGTGATAGCAGCTGAATaGGCAGTGCCAAGGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: ALACPIPKHGMSLQEDTVVIAAE*AVPRST Trigger: TGTGGACCTTGGCACTGCTCATTCAGCTGCTATCAC...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGCCACCATCACCATCTTaGTGCCCTCCAGGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: GRPSVDPCQTGALQIFTKPPSPS*CPPGLG Trigger: TCCAAGGCCTGGAGGGCATCAAGATGGTGATGGTGG...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | CTTCACTGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTGAGGGGTGGCCTCTGTaGAGGTTCCAGGCTAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LHWPFYPIDDTIQDADNSEGWPL*RFQAKQ Trigger: CTGCTTAGCCTGGAACCTGCACAGAGGCCACCCCTC...ACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCAGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGCTCCTGGTCCAGAGGTaGAGAGCCCAGTGGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GRPSVDPCQTGALQIFTKLLVQR*RAQWCE Trigger: TTCACACCACTGGGCTCTGCACCTCTGGACCAGGAG...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCCAGCTGAATGAGCAGTaGCAAGGTCCACACACAGCA | + |
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Preference number: 4 (lower is better) Translates to: ALACPIPKHGMSLQEDTVQLNEQ*QGPHTA Trigger: TGCTGTGTGTGGACCTTGGCACTGCTCATTCAGCTG...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | TGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTCATTCCACCTGGCACTCGTTCTaGGCCGCCTGCCTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: WPFYPIDDTIQDADNSHSTWHSF*AACLSS Trigger: AGAAGAGAGGCAGGCGGCCCAGAACGAGTGCCAGGT...GGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGGGCTATAGGTGGTCCTaGGGTCAGGGACTTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRPSVDPCQTGALQIFTKGYRWS*GQGLLC Trigger: GCAGAGAAGTCCCTGACCCCAGGACCACCTATAGCC...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATCGCCCAGCGGCTACCTaGACCACCTCCGTGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TIQDADNSHSSGTCIFQNRPAAT*TTSVLS Trigger: GCTCAACACGGAGGTGGTCCAGGTAGCCGCTGGGCG...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATCACAGCAGGGGCTCCTaGTCCAGAGGTGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TIQDADNSHSSGTCIFQNHSRGS*SRGAEP Trigger: GGGCTCTGCACCTCTGGACCAGGAGCCCCTGCTGTG...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGCTTGATGGTCACACCTaGCTGGCCTTCCAGGAAACG | + |
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Preference number: 4 (lower is better) Translates to: GRPSVDPCQTGALQIFTKLDGHT*LAFQET Trigger: CGTTTCCTGGAAGGCCAGTCAGGTGTGACCATCAAG...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCCCTGCGGGAACTGGTaGCCAGCTGTCCATGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: DDTIQDADNSHSSGTCIFPCGNW*PAVHVD Trigger: ATCAACATGGACAGCTGGGCACCAGTTCCCGCAGGG...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGATACACTTCCCCCTCTaGCCCAACGGCCACAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GRPSVDPCQTGALQIFTKIHFPL*PNGHSE Trigger: TTCACTGTGGCCGTTGGGGCAGAGGGGGAAGTGTAT...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCGGTCATCTGTTCCACTaGGATCTGCTTGAGGATCAC | + |
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Preference number: 4 (lower is better) Translates to: ALACPIPKHGMSLQEDTVGHLFH*DLLEDH Trigger: GTGATCCTCAAGCAGATCCCAGTGGAACAGATGACC...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATCTGAGCTTCCTGTCCTaGGGCCACAGGCACCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TIQDADNSHSSGTCIFQNLSFLS*GHRHLL Trigger: CAGCAGGTGCCTGTGGCCCCAGGACAGGAAGCTCAG...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | CTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTGGTGCCACAGGCACCTGCTaGGGGCAGTTATGGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: LTTVIPRAPAFFRILKGGATGTC*GQLWDS Trigger: GGAGTCCCATAACTGCCCTCAGCAGGTGCCTGTGGC...ACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCCCTGCCTGGAGAGGTaGGGATCATGGAAGAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: DDTIQDADNSHSSGTCIFPCLER*GSWKSQ Trigger: TTGACTCTTCCATGATCCTCACCTCTCCAGGCAGGG...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | CTTCACTGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTTTTCGCAGGCACAGGTaGACAATCCCGAAGGCACCT | + |
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Preference number: 4 (lower is better) Translates to: LHWPFYPIDDTIQDADNSFRRHR*TIPKAP Trigger: AGGTGCCTTCGGGATTGTGCACCTGTGCCTGCGAAA...ACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCAGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | TGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTCATTCCTATGGGACTCCCTGGTaGCTAGTCCCAGTCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: WPFYPIDDTIQDADNSHSYGTPW*LVPVYH Trigger: GTGGTAGACTGGGACTAGGCACCAGGGAGTCCCATA...GGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTTGTACCGGTCAGAGATaGGTGCGAAGGTGCCACTCA | + |
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Preference number: 4 (lower is better) Translates to: FEGRPSVDPCQTGALQIFCTGQR*VRRCHS Trigger: TGAGTGGCACCTTCGCACCCATCTCTGACCGGTACA...AAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | CTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTGGTTACATCGGGCACTGGTaGCCCTGCTCCCTGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTTVIPRAPAFFRILKGGYIGHW*PCSLCC Trigger: GCAGCACAGGGAGCAGGGCCACCAGTGCCCGATGTA...ACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATAGGTGCAGAGCCCAGTaGTGTGAAGCTCAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIQDADNSHSSGTCIFQNRCRAQ*CEAQGL Trigger: GAGGCCCTGAGCTTCACACCACTGGGCTCTGCACCT...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | CTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTGGTCGCAGGCCACATGCTTaGTGGTCACACCTGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTTVIPRAPAFFRILKGGRRPHA*WSHLTG Trigger: GCCAGTCAGGTGTGACCATCAAGCATGTGGCCTGCG...ACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | CTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTGGTCCACAGACAACTCTCTaGGCTTCCTGTCCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTTVIPRAPAFFRILKGGPQTTL*ASCPGA Trigger: GGCCCCAGGACAGGAAGCTCAGAGAGTTGTCTGTGG...ACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | TGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTCATTCCAGCAGTGATAGCAGCTaGATGAGCAGTGCCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WPFYPIDDTIQDADNSHSSSDSS*MSSAKV Trigger: GACCTTGGCACTGCTCATTCAGCTGCTATCACTGCT...GGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATAGGATCACCAGCTTCTaGTCGGCCTTTCGCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TIQDADNSHSSGTCIFQNRITSF*SAFRRH Trigger: GTGCCTGCGAAAGGCCGACCAGAAGCTGGTGATCCT...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATAGACTCAGGACGAGCTaGCGAAGCTCAGGGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TIQDADNSHSSGTCIFQNRLRTS*RSSGLY Trigger: GTACAGCCCTGAGCTTCGCCAGCTCGTCCTGAGTCT...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTATGGTCACACCTGACTaGCCTTCCAGGAAACGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DDTIQDADNSHSSGTCIFMVTPD*PSRKRE Trigger: CTCTCGTTTCCTGGAAGGCCAGTCAGGTGTGACCAT...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGTCTACAATGGTGGGCTaGCTGATGTCAGTCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRPSVDPCQTGALQIFTKSTMVG*LMSVRL Trigger: CAACCTGACTGACATCAGCCAGCCCACCATTGTAGA...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | CTTCACTGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTAGTTATGGGACTCCCTaGTGCCTAGTCCCAGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LHWPFYPIDDTIQDADNSSYGTP*CLVPVY Trigger: GTAGACTGGGACTAGGCACCAGGGAGTCCCATAACT...ACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCAGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTAGCAGAGTGTTCCCATaGCAGCAGGACACTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DDTIQDADNSHSSGTCIFSRVFP*QQDTEV Trigger: GACTTCAGTGTCCTGCTGCCATGGGAACACTCTGCT...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGATCTGCACAAAGAAGTaGAGGATCGTCTCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRPSVDPCQTGALQIFTKICTKK*RIVSSS Trigger: AGAGGAGGAGACGATCCTTCACTTCTTTGTGCAGAT...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTCAAAGTCACCGATCTTaGCCACCATGCGGTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FEGRPSVDPCQTGALQIFQSHRS*PPCGVC Trigger: ACAAACACCGCATGGTGGTCAAGATCGGTGACTTTG...AAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | CTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTGGTCGAAGGTGCCACTCATaGTCTTCAGCACCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTTVIPRAPAFFRILKGGRRCHS*SSAPGL Trigger: CAGCCCTGGTGCTGAAGATCATGAGTGGCACCTTCG...ACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCCAAGCCTAGCTTGTTaGACCTGTTACTTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DDTIQDADNSHSSGTCIFPSLAC*TCYFHR Trigger: CCTGTGGAAGTAACAGGTTCAACAAGCTAGGCTTGG...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATCCGGTCAGAGATGGGTaGGAAGGTGCCACTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TIQDADNSHSSGTCIFQNPVRDG*EGATHD Trigger: ATCATGAGTGGCACCTTCGCACCCATCTCTGACCGG...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCCTGCCTCTCTTCTTTaGTCATCTGTTCCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DDTIQDADNSHSSGTCIFPASLL*SSVPLG Trigger: TCCCAGTGGAACAGATGACCAAAGAAGAGAGGCAGG...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATCTCCGTGTTGAGCATTaGCAACCTCAGGGGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TIQDADNSHSSGTCIFQNLRVEH*QPQGTA Trigger: AGCAGTCCCCTGAGGTTGCCAATGCTCAACACGGAG...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR TCA 90 bp | CTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTGGTAGATGTGTGTGCACGTaGTGCAGAGCCAGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LTTVIPRAPAFFRILKGGRCVCT*CRASRI Trigger: GATCCTGCTGGCTCTGCATCACGTGCACACACATCT...ACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR GCA 90 bp | CTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTGGTTCGTTCTGGGCCGCCTaGCTCTCTTCTTTGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LTTVIPRAPAFFRILKGGSFWAA*LSSLVI Trigger: GATGACCAAAGAAGAGAGGCAGGCGGCCCAGAACGA...ACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CCA 90 bp | CTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTGGTATAACTCTCCATCTGTaGACAGGGCCAGCACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTTVIPRAPAFFRILKGGITLHL*TGPAHE Trigger: CTCATGTGCTGGCCCTGTCCACAGATGGAGAGTTAT...ACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | ACTGGTGGCCCTGCTCCCTGTGCTGCCAGAGGCTATAGGTGGTCCTaGGGTCAGGGACTTCTCTGCCCTCCGCATGCGCACGCTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGGPAPCAARGYRWS*GQGLLCPPHAHAAH Trigger: GTGGGCAGCGTGCGCATGCGGAGGGCAGAGAAGTCCCTGACCCCAGGACCACCTATAGCCTCTGGCAGCACAGGGAGCAGGGCCACCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | TCGGGCACTGGTGGCCCTGCTCCCTGTGCTGCCAGAGGCTATAGGTaGTCCTGGGGTCAGGGACTTCTCTGCCCTCCGCATGCGCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGTGGPAPCAARGYR*SWGQGLLCPPHAHA Trigger: AGCGTGCGCATGCGGAGGGCAGAGAAGTCCCTGACCCCAGGACCACCTATAGCCTCTGGCAGCACAGGGAGCAGGGCCACCAGTGCCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS GCA 90 bp | GCCTCCCACAGGATGAGGCGTCCAGAGCGCGTAACGCCAGCCTTCTaGGTGCGCCCAGCGGCTACCTGGACCACCTCCGTGTTGAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: ASHRMRRPERVTPAF*VRPAATWTTSVLSI Trigger: AATGCTCAACACGGAGGTGGTCCAGGTAGCCGCTGGGCGCACGCAGAAGGCTGGCGTTACGCGCTCTGGACGCCTCATCCTGTGGGAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | AGGGACTTCTCTGCCCTCCGCATGCGCACGCTGCCCACATCGGTGTaGATGTTGAGTAGGGCCCGGATGCAGAGGGGCTGCGCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RDFSALRMRTLPTSV*MLSRARMQRGCAMM Trigger: CATCATGGCGCAGCCCCTCTGCATCCGGGCCCTACTCAACATCCACACCGATGTGGGCAGCGTGCGCATGCGGAGGGCAGAGAAGTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | CTGCGTGCGCCCAGCGGCTACCTGGACCACCTCCGTGTTGAGCATTaGCAACCTCAGGGGACTGCTAAGGCCACCACCCCAAGCGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRAPSGYLDHLRVEH*QPQGTAKATTPSVD Trigger: GTCTACGCTTGGGGTGGTGGCCTTAGCAGTCCCCTGAGGTTGCCAATGCTCAACACGGAGGTGGTCCAGGTAGCCGCTGGGCGCACGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | CCAGAGCGCGTAACGCCAGCCTTCTGCGTGCGCCCAGCGGCTACCTaGACCACCTCCGTGTTGAGCATTGGCAACCTCAGGGGACTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PERVTPAFCVRPAAT*TTSVLSIGNLRGLL Trigger: TAGCAGTCCCCTGAGGTTGCCAATGCTCAACACGGAGGTGGTCCAGGTAGCCGCTGGGCGCACGCAGAAGGCTGGCGTTACGCGCTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | GTCCTGGGGCCACAGGCACCTGCTGAGGGCAGTTATGGGACTCCCTaGTGCCTAGTCCCAGTCTACCACCATCTCCTCTGCCCCAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VLGPQAPAEGSYGTP*CLVPVYHHLLCPRR Trigger: TCGCCTGGGGCAGAGGAGATGGTGGTAGACTGGGACTAGGCACCAGGGAGTCCCATAACTGCCCTCAGCAGGTGCCTGTGGCCCCAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS GCA 90 bp | GATGCAGAGGGGCTGCGCCATGATGTGGCTGAGGGGTGGCCTCTGTaGAGGTTCCAGGCTAAGCAGACTCAGGACGAGCTGGCGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DAEGLRHDVAEGWPL*RFQAKQTQDELAKL Trigger: GAGCTTCGCCAGCTCGTCCTGAGTCTGCTTAGCCTGGAACCTGCACAGAGGCCACCCCTCAGCCACATCATGGCGCAGCCCCTCTGCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 90 bp | GTCACACCTGACTGGCCTTCCAGGAAACGAGAGACAAACTGGGGCTaGGGCAGCTCCACGGCTCCAGGAAGGAGTGTGCCGCCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTPDWPSRKRETNWG*GSSTAPGRSVPPPA Trigger: AGCTGGAGGCGGCACACTCCTTCCTGGAGCCGTGGAGCTGCCTCAGCCCCAGTTTGTCTCTCGTTTCCTGGAAGGCCAGTCAGGTGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS GCA 90 bp | TGTGCTGCCAGAGGCTATAGGTGGTCCTGGGGTCAGGGACTTCTCTaGCCTCCGCATGCGCACGCTGCCCACATCGGTGTGGATGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CAARGYRWSWGQGLL*PPHAHAAHIGVDVE Trigger: CTCAACATCCACACCGATGTGGGCAGCGTGCGCATGCGGAGGGCAGAGAAGTCCCTGACCCCAGGACCACCTATAGCCTCTGGCAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS GCA 90 bp | CTGGGGCCACAGGCACCTGCTGAGGGCAGTTATGGGACTCCCTGGTaGCTAGTCCCAGTCTACCACCATCTCCTCTGCCCCAGGCGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LGPQAPAEGSYGTPW*LVPVYHHLLCPRRI Trigger: TATTCGCCTGGGGCAGAGGAGATGGTGGTAGACTGGGACTAGGCACCAGGGAGTCCCATAACTGCCCTCAGCAGGTGCCTGTGGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | GGTGGCCTCTGTGCAGGTTCCAGGCTAAGCAGACTCAGGACGAGCTaGCGAAGCTCAGGGCTGTACCGGTCAGAGATGGGTGCGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGLCAGSRLSRLRTS*RSSGLYRSEMGAKV Trigger: CACCTTCGCACCCATCTCTGACCGGTACAGCCCTGAGCTTCGCCAGCTCGTCCTGAGTCTGCTTAGCCTGGAACCTGCACAGAGGCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | TGGATGTTGAGTAGGGCCCGGATGCAGAGGGGCTGCGCCATGATGTaGCTGAGGGGTGGCCTCTGTGCAGGTTCCAGGCTAAGCAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: WMLSRARMQRGCAMM*LRGGLCAGSRLSRL Trigger: GAGTCTGCTTAGCCTGGAACCTGCACAGAGGCCACCCCTCAGCCACATCATGGCGCAGCCCCTCTGCATCCGGGCCCTACTCAACATCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 90 bp | GCTCAGGGCTGTACCGGTCAGAGATGGGTGCGAAGGTGCCACTCATaGTCTTCAGCACCAGGGCTGGCAAGTTTGCAGCCTCGAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AQGCTGQRWVRRCHS*SSAPGLASLQPRRP Trigger: GGGCCTTCGAGGCTGCAAACTTGCCAGCCCTGGTGCTGAAGATCATGAGTGGCACCTTCGCACCCATCTCTGACCGGTACAGCCCTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017549.13 ENSMUST00000148154.3 |
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| CDS CCA 90 bp | GTCTACCACCATCTCCTCTGCCCCAGGCGAATAACTCTCCATCTGTaGACAGGGCCAGCACATGAGAGGCCCCACAGGCCACCTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VYHHLLCPRRITLHL*TGPAHERPHRPPAP Trigger: TGGTGCAGGTGGCCTGTGGGGCCTCTCATGTGCTGGCCCTGTCCACAGATGGAGAGTTATTCGCCTGGGGCAGAGGAGATGGTGGTAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 90 bp | AGCGGTGAACAGGTCCCCGCAGGCCACATGCTTGATGGTCACACCTaGCTGGCCTTCCAGGAAACGAGAGACAAACTGGGGCTGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGEQVPAGHMLDGHT*LAFQETRDKLGLRQ Trigger: CTGCCTCAGCCCCAGTTTGTCTCTCGTTTCCTGGAAGGCCAGTCAGGTGTGACCATCAAGCATGTGGCCTGCGGGGACCTGTTCACCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS GCA 90 bp | TGGGCCGCCTGCCTCTCTTCTTTGGTCATCTGTTCCACTGGGATCTaGTTGAGGATCACCAGCTTCTGGTCGGCCTTTCGCAGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: WAACLSSLVICSTGI*LRITSFWSAFRRHR Trigger: CCTGTGCCTGCGAAAGGCCGACCAGAAGCTGGTGATCCTCAAGCAGATCCCAGTGGAACAGATGACCAAAGAAGAGAGGCAGGCGGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS GCA 90 bp | GGGTGGTTGAGCAGCTTGAGCACCTGGCACTCGTTCTGGGCCGCCTaGCTCTCTTCTTTGGTCATCTGTTCCACTGGGATCTGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWLSSLSTWHSFWAA*LSSLVICSTGICLR Trigger: CCTCAAGCAGATCCCAGTGGAACAGATGACCAAAGAAGAGAGGCAGGCGGCCCAGAACGAGTGCCAGGTGCTCAAGCTGCTCAACCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CAA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCGGGTGGTTGAGCAGCTaGAGCACCTGGCACTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALACPIPKHGMSLQEDTVGWLSS*STWHSF Trigger: GAACGAGTGCCAGGTGCTCAAGCTGCTCAACCACCC...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CAA 90 bp | GCCCTGGCTTGCCCTATTCCAAAGCATGGCATGAGTCTCCAAGAGGACACCGTCCCGCAGGCCACATGCTaGATGGTCACACCTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALACPIPKHGMSLQEDTVPQATC*MVTPDW Trigger: CCAGTCAGGTGTGACCATCAAGCATGTGGCCTGCGG...GACGGTGTCCTCTTGGAGACTCATGCCATGCTTTGGAATAGGGCAAGCCAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 90 bp | CCGCCTGCCTCTCTTCTTTGGTCATCTGTTCCACTGGGATCTGCTTaGGGATCACCAGCTTCTGGTCGGCCTTTCGCAGGCACAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPASLLWSSVPLGSA*GSPASGRPFAGTGA Trigger: TGCACCTGTGCCTGCGAAAGGCCGACCAGAAGCTGGTGATCCTCAAGCAGATCCCAGTGGAACAGATGACCAAAGAAGAGAGGCAGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | ATGACGTTGGGGTGGTTGAGCAGCTTGAGCACCTGGCACTCGTTCTaGGCCGCCTGCCTCTCTTCTTTGGTCATCTGTTCCACTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: MTLGWLSSLSTWHSF*AACLSSLVICSTGI Trigger: GATCCCAGTGGAACAGATGACCAAAGAAGAGAGGCAGGCGGCCCAGAACGAGTGCCAGGTGCTCAAGCTGCTCAACCACCCCAACGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | TTGGTCATCTGTTCCACTGGGATCTGCTTGAGGATCACCAGCTTCTaGTCGGCCTTTCGCAGGCACAGGTGCACAATCCCGAAGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LVICSTGICLRITSF*SAFRRHRCTIPKAP Trigger: AGGTGCCTTCGGGATTGTGCACCTGTGCCTGCGAAAGGCCGACCAGAAGCTGGTGATCCTCAAGCAGATCCCAGTGGAACAGATGACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 90 bp | CATGGAAGAGTCAATACCACAGACAACTCTCTGAGCTTCCTGTCCTaGGGCCACAGGCACCTGCTGAGGGCAGTTATGGGACTCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGRVNTTDNSLSFLS*GHRHLLRAVMGLPG Trigger: ACCAGGGAGTCCCATAACTGCCCTCAGCAGGTGCCTGTGGCCCCAGGACAGGAAGCTCAGAGAGTTGTCTGTGGTATTGACTCTTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CAA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATGATGCCCTCCAGGCCTaGGACCCGACAGGGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TIQDADNSHSSGTCIFQNDALQA*DPTGCP Trigger: AGGGCACCCTGTCGGGTCCAAGGCCTGGAGGGCATC...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CAA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGACATCGGTGTGGATGTaGAGTAGGGCCCGGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRPSVDPCQTGALQIFTKTSVWM*SRARMQ Trigger: CTGCATCCGGGCCCTACTCAACATCCACACCGATGT...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTTGGACCACCTCCGTGTaGAGCATTGGCAACCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHWPFYPIDDTIQDADNSWTTSV*SIGNLR Trigger: CCTGAGGTTGCCAATGCTCAACACGGAGGTGGTCCA...ACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCAGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CAA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTGCCTGCCTCTCTTCTTaGGTCATCTGTTCCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DDTIQDADNSHSSGTCIFACLSS*VICSTG Trigger: CCCAGTGGAACAGATGACCAAAGAAGAGAGGCAGGC...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CAA 90 bp | GGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTACTAAGAGGATGTTCTGTGTCTaGAGGTCCCGATGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GRPSVDPCQTGALQIFTKRMFCV*RSRCRM Trigger: CATCCTGCATCGGGACCTCAAGACACAGAACATCCT...CTTAGTAAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS-3UTR CAA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATGCCTCGAAGGCCCTCTaGAGGCTGGCCAGCTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: TIQDADNSHSSGTCIFQNASKAL*RLASSY Trigger: ATATGAGCTGGCCAGCCTCAAGAGGGCCTTCGAGGC...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 90 bp | AAGGCTTCTACAATGGTGGGCTGGCTGATGTCAGTCAGGTTGCCGTaGCCTAAACACCCATTGCTGCCACTGCCGAACGTCATGATAATG | + |
|
Preference number: 5 (lower is better) Translates to: KASTMVGWLMSVRLP*PKHPLLPLPNVMIM Trigger: CATTATCATGACGTTCGGCAGTGGCAGCAATGGGTGTTTAGGTCACGGCAACCTGACTGACATCAGCCAGCCCACCATTGTAGAAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS-3UTR CAA 90 bp | GACGACACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTTCCTCTAGCAGAGAGTaGCAGCGCTTCTGGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DDTIQDADNSHSSGTCIFSSSRE*QRFWMN Trigger: GTTCATCCAGAAGCGCTGCAACTCTCTGCTAGAGGA...AAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGTGTCGTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTCCAAAGTCACCGATCTaGACCACCATGCGGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FEGRPSVDPCQTGALQIFPKSPI*TTMRCL Trigger: CAAACACCGCATGGTGGTCAAGATCGGTGACTTTGG...AAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS-3UTR CAA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATTCCACTGGGATCTGCTaGAGGATCACCAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TIQDADNSHSSGTCIFQNSTGIC*RITSFW Trigger: CCAGAAGCTGGTGATCCTCAAGCAGATCCCAGTGGA...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS-3UTR CAA 90 bp | CTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACTCAAAGGTGGTATGACGTTGGGGTGGTaGAGCAGCTTGAGCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTTVIPRAPAFFRILKGGMTLGW*SSLSTW Trigger: CCAGGTGCTCAAGCTGCTCAACCACCCCAACGTCAT...ACCACCTTTGAGTATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS-3UTR CAA 90 bp | CTTCACTGGCCTTTCTACCCCATTGACGACACAATCCAGGACGCTGACAACAGTGCAATCATGAGGGCCTaGTCCTCTAGGAAATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHWPFYPIDDTIQDADNSAIMRA*SSRKFS Trigger: TGAGAATTTCCTAGAGGACAAGGCCCTCATGATTGC...ACTGTTGTCAGCGTCCTGGATTGTGTCGTCAATGGGGTAGAAAGGCCAGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGGCCGTCCTTCTGTTGACCCCTGCCAGACTGGAGCCTTGCAGATATTTTCCAAGCCTAGCTTGTaGAACCTGTTACTTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FEGRPSVDPCQTGALQIFSKPSL*NLLLPQ Trigger: CTGTGGAAGTAACAGGTTCAACAAGCTAGGCTTGGA...AAATATCTGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS-3UTR CAA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATACCACCATGCGGTGTTaGTCAAGAAGGATGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TIQDADNSHSSGTCIFQNTTMRC*SRRMFC Trigger: ACAGAACATCCTTCTTGACAAACACCGCATGGTGGT...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS-3UTR CAA 90 bp | ACAATCCAGGACGCTGACAACAGTCATTCCTCGGGCACCTGCATTTTTCAGAATGCCCAGCTGTCCATGTaGATTGCTGCCAAAAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: TIQDADNSHSSGTCIFQNAQLSM*IAAKSI Trigger: TATACTTTTGGCAGCAATCAACATGGACAGCTGGGC...ATTCTGAAAAATGCAGGTGCCCGAGGAATGACTGTTGTCAGCGTCCTGGATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS CAA 90 bp | GGCATCCCCGCAGGCCACCATCACCATCTTGATGCCCTCCAGGCCTaGGACCCGACAGGGTGCCCTGCTGACCCTGCGGGAACTGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GIPAGHHHHLDALQA*DPTGCPADPAGTGA Trigger: GGCACCAGTTCCCGCAGGGTCAGCAGGGCACCCTGTCGGGTCCAAGGCCTGGAGGGCATCAAGATGGTGATGGTGGCCTGCGGGGATGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS GCA 72 bp | AGGATGAGGCGTCCAGAGCGCGTAACGCCAGCCTTCTaGGTGCGCCCAGCGGCTACCTGGACCACCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RMRRPERVTPAF*VRPAATWTTSV Trigger: CACGGAGGTGGTCCAGGTAGCCGCTGGGCGCACGCAGAAGGCTGGCGTTACGCGCTCTGGACGCCTCATCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 72 bp | TGCCCTCCAGGCCTTGGACCCGACAGGGTGCCCTGCTaGCCCTGCGGGAACTGGTGCCCAGCTGTCCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: CPPGLGPDRVPC*PCGNWCPAVHV Trigger: AACATGGACAGCTGGGCACCAGTTCCCGCAGGGTCAGCAGGGCACCCTGTCGGGTCCAAGGCCTGGAGGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | GCTAAGGCCACCACCCCAAGCGTAGACCGAAGACAGTaGCGGTGGGATAGCCGGTCTCACAGGTCCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AKATTPSVDRRQ*RWDSRSHRSPG Trigger: CCCCGGGGACCTGTGAGACCGGCTATCCCACCGCCACTGTCTTCGGTCTACGCTTGGGGTGGTGGCCTTAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS CAA 72 bp | GCAGGCCACCATCACCATCTTGATGCCCTCCAGGCCTaGGACCCGACAGGGTGCCCTGCTGACCCTGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGHHHHLDALQA*DPTGCPADPAG Trigger: TCCCGCAGGGTCAGCAGGGCACCCTGTCGGGTCCAAGGCCTGGAGGGCATCAAGATGGTGATGGTGGCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CAA 90 bp | CCAACGGCCACAGTGAAGGCATCCCCGCAGGCCACCATCACCATCTaGATGCCCTCCAGGCCTTGGACCCGACAGGGTGCCCTGCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: PTATVKASPQATITI*MPSRPWTRQGALLT Trigger: GGTCAGCAGGGCACCCTGTCGGGTCCAAGGCCTGGAGGGCATCAAGATGGTGATGGTGGCCTGCGGGGATGCCTTCACTGTGGCCGTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | AGTAGGGCCCGGATGCAGAGGGGCTGCGCCATGATGTaGCTGAGGGGTGGCCTCTGTGCAGGTTCCAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SRARMQRGCAMM*LRGGLCAGSRL Trigger: TAGCCTGGAACCTGCACAGAGGCCACCCCTCAGCCACATCATGGCGCAGCCCCTCTGCATCCGGGCCCTACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | CCTGCTCCCTGTGCTGCCAGAGGCTATAGGTGGTCCTaGGGTCAGGGACTTCTCTGCCCTCCGCATGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PAPCAARGYRWS*GQGLLCPPHAH Trigger: GTGCGCATGCGGAGGGCAGAGAAGTCCCTGACCCCAGGACCACCTATAGCCTCTGGCAGCACAGGGAGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | GGTGGCCCTGCTCCCTGTGCTGCCAGAGGCTATAGGTaGTCCTGGGGTCAGGGACTTCTCTGCCCTCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGPAPCAARGYR*SWGQGLLCPPH Trigger: ATGCGGAGGGCAGAGAAGTCCCTGACCCCAGGACCACCTATAGCCTCTGGCAGCACAGGGAGCAGGGCCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CAA 90 bp | TTCTCTGCCCTCCGCATGCGCACGCTGCCCACATCGGTGTGGATGTaGAGTAGGGCCCGGATGCAGAGGGGCTGCGCCATGATGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSALRMRTLPTSVWM*SRARMQRGCAMMWL Trigger: CAGCCACATCATGGCGCAGCCCCTCTGCATCCGGGCCCTACTCAACATCCACACCGATGTGGGCAGCGTGCGCATGCGGAGGGCAGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | CCCAGCGGCTACCTGGACCACCTCCGTGTTGAGCATTaGCAACCTCAGGGGACTGCTAAGGCCACCACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSGYLDHLRVEH*QPQGTAKATTP Trigger: TGGGGTGGTGGCCTTAGCAGTCCCCTGAGGTTGCCAATGCTCAACACGGAGGTGGTCCAGGTAGCCGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | GTAACGCCAGCCTTCTGCGTGCGCCCAGCGGCTACCTaGACCACCTCCGTGTTGAGCATTGGCAACCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VTPAFCVRPAAT*TTSVLSIGNLR Trigger: CCTGAGGTTGCCAATGCTCAACACGGAGGTGGTCCAGGTAGCCGCTGGGCGCACGCAGAAGGCTGGCGTTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CAA 72 bp | ACAGTGAAGGCATCCCCGCAGGCCACCATCACCATCTaGATGCCCTCCAGGCCTTGGACCCGACAGGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TVKASPQATITI*MPSRPWTRQGA Trigger: GGCACCCTGTCGGGTCCAAGGCCTGGAGGGCATCAAGATGGTGATGGTGGCCTGCGGGGATGCCTTCACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 72 bp | GACTGGCCTTCCAGGAAACGAGAGACAAACTGGGGCTaGGGCAGCTCCACGGCTCCAGGAAGGAGTGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DWPSRKRETNWG*GSSTAPGRSVP Trigger: CGGCACACTCCTTCCTGGAGCCGTGGAGCTGCCTCAGCCCCAGTTTGTCTCTCGTTTCCTGGAAGGCCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS GCA 72 bp | CAGGCACCTGCTGAGGGCAGTTATGGGACTCCCTGGTaGCTAGTCCCAGTCTACCACCATCTCCTCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QAPAEGSYGTPW*LVPVYHHLLCP Trigger: GGGGCAGAGGAGATGGTGGTAGACTGGGACTAGGCACCAGGGAGTCCCATAACTGCCCTCAGCAGGTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | CATCTCCTCTGCCCCAGGCGAATAACTCTCCATCTGTaGACAGGGCCAGCACATGAGAGGCCCCACAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HLLCPRRITLHL*TGPAHERPHRP Trigger: TGGCCTGTGGGGCCTCTCATGTGCTGGCCCTGTCCACAGATGGAGAGTTATTCGCCTGGGGCAGAGGAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | CCACAGGCACCTGCTGAGGGCAGTTATGGGACTCCCTaGTGCCTAGTCCCAGTCTACCACCATCTCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PQAPAEGSYGTP*CLVPVYHHLLC Trigger: GCAGAGGAGATGGTGGTAGACTGGGACTAGGCACCAGGGAGTCCCATAACTGCCCTCAGCAGGTGCCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 72 bp | CAGGTCCCCGCAGGCCACATGCTTGATGGTCACACCTaGCTGGCCTTCCAGGAAACGAGAGACAAACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QVPAGHMLDGHT*LAFQETRDKLG Trigger: CCCCAGTTTGTCTCTCGTTTCCTGGAAGGCCAGTCAGGTGTGACCATCAAGCATGTGGCCTGCGGGGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS GCA 72 bp | CCCTGGTGCCTAGTCCCAGTCTACCACCATCTCCTCTaGCCCAGGCGAATAACTCTCCATCTGTGGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PWCLVPVYHHLL*PRRITLHLWTG Trigger: CCCTGTCCACAGATGGAGAGTTATTCGCCTGGGGCAGAGGAGATGGTGGTAGACTGGGACTAGGCACCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | GGGTGGTTGAGCAGCTTGAGCACCTGGCACTCGTTCTaGGCCGCCTGCCTCTCTTCTTTGGTCATCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GWLSSLSTWHSF*AACLSSLVICS Trigger: GGAACAGATGACCAAAGAAGAGAGGCAGGCGGCCCAGAACGAGTGCCAGGTGCTCAAGCTGCTCAACCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | TCGATGACGTTGGGGTGGTTGAGCAGCTTGAGCACCTaGCACTCGTTCTGGGCCGCCTGCCTCTCTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SMTLGWLSSLST*HSFWAACLSSL Trigger: CAAAGAAGAGAGGCAGGCGGCCCAGAACGAGTGCCAGGTGCTCAAGCTGCTCAACCACCCCAACGTCATCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CCA 72 bp | TGTGCAGGTTCCAGGCTAAGCAGACTCAGGACGAGCTaGCGAAGCTCAGGGCTGTACCGGTCAGAGATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CAGSRLSRLRTS*RSSGLYRSEMG Trigger: ACCCATCTCTGACCGGTACAGCCCTGAGCTTCGCCAGCTCGTCCTGAGTCTGCTTAGCCTGGAACCTGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CAA 90 bp | CGGTCTGTCAAGCAAGCGGTGAACAGGTCCCCGCAGGCCACATGCTaGATGGTCACACCTGACTGGCCTTCCAGGAAACGAGAGACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RSVKQAVNRSPQATC*MVTPDWPSRKRETN Trigger: GTTTGTCTCTCGTTTCCTGGAAGGCCAGTCAGGTGTGACCATCAAGCATGTGGCCTGCGGGGACCTGTTCACCGCTTGCTTGACAGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CAA 90 bp | GGGTGCCCTGCTGACCCTGCGGGAACTGGTGCCCAGCTGTCCATGTaGATTGCTGCCAAAAGTATAGCAGTCCCCAGAAGCAGTGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: GCPADPAGTGAQLSM*IAAKSIAVPRSSDS Trigger: GCTATCACTGCTTCTGGGGACTGCTATACTTTTGGCAGCAATCAACATGGACAGCTGGGCACCAGTTCCCGCAGGGTCAGCAGGGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 72 bp | TCTCCTCCTCTAGCAGAGAGTTGCAGCGCTTCTGGATaGACTCGGCCAAGGTGCCACCTGGTGCGTACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPPLAESCSASG*TRPRCHLVRTP Trigger: TGGAGTACGCACCAGGTGGCACCTTGGCCGAGTTCATCCAGAAGCGCTGCAACTCTCTGCTAGAGGAGGAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS GCA 72 bp | AGCAGCTTGAGCACCTGGCACTCGTTCTGGGCCGCCTaGCTCTCTTCTTTGGTCATCTGTTCCACTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SSLSTWHSFWAA*LSSLVICSTGI Trigger: GATCCCAGTGGAACAGATGACCAAAGAAGAGAGGCAGGCGGCCCAGAACGAGTGCCAGGTGCTCAAGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS GCA 72 bp | GCGCTTCTGGATGAACTCGGCCAAGGTGCCACCTGGTaGGTACTCCATAGCAATCATGAGGGCCTTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALLDELGQGATW*VLHSNHEGLVL Trigger: GAGGACAAGGCCCTCATGATTGCTATGGAGTACGCACCAGGTGGCACCTTGGCCGAGTTCATCCAGAAGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS CCA 72 bp | TGTTCCACTGGGATCTGCTTGAGGATCACCAGCTTCTaGTCGGCCTTTCGCAGGCACAGGTGCACAATCCCG | + |
|
Preference number: 6 (lower is better) Translates to: CSTGICLRITSF*SAFRRHRCTIP Trigger: CGGGATTGTGCACCTGTGCCTGCGAAAGGCCGACCAGAAGCTGGTGATCCTCAAGCAGATCCCAGTGGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS CCA 72 bp | GCAGCGCTTCTGGATGAACTCGGCCAAGGTGCCACCTaGTGCGTACTCCATAGCAATCATGAGGGCCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: AALLDELGQGAT*CVLHSNHEGLV Trigger: GACAAGGCCCTCATGATTGCTATGGAGTACGCACCAGGTGGCACCTTGGCCGAGTTCATCCAGAAGCGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS CCA 72 bp | AGTCACCATGTAAGGATGAGTCTCATCCAGCTGCACTaGCCTAGGCAGCCCCGCATCCTCATCCCTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SHHVRMSLIQLH*PRQPRILIPPS Trigger: GGAAGGAGGGATGAGGATGCGGGGCTGCCTAGGCCAGTGCAGCTGGATGAGACTCATCCTTACATGGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS CAA 72 bp | ACCAGGGCTGGCAAGTTTGCAGCCTCGAAGGCCCTCTaGAGGCTGGCCAGCTCATATAAGACACAGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TRAGKFAASKAL*RLASSYKTQPR Trigger: TCTGGGCTGTGTCTTATATGAGCTGGCCAGCCTCAAGAGGGCCTTCGAGGCTGCAAACTTGCCAGCCCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017549.13 ENSMUST00000148154.3 |
||
| CDS CAA 72 bp | AAGCAAGCGGTGAACAGGTCCCCGCAGGCCACATGCTaGATGGTCACACCTGACTGGCCTTCCAGGAAACGA | + |
|
Preference number: 6 (lower is better) Translates to: KQAVNRSPQATC*MVTPDWPSRKR Trigger: TCGTTTCCTGGAAGGCCAGTCAGGTGTGACCATCAAGCATGTGGCCTGCGGGGACCTGTTCACCGCTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS CAA 72 bp | GGCTCCTCGTCCAGGGATAGGTGGTCCAAGCCTAGCTaGTTGAACCTGTTACTTCCACAGGCCAGGACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSSSRDRWSKPS*LNLLLPQARTL Trigger: CAGGGTCCTGGCCTGTGGAAGTAACAGGTTCAACAAGCTAGGCTTGGACCACCTATCCCTGGACGAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS CAA 90 bp | AGCTTGAGCACCTGGCACTCGTTCTGGGCCGCCTGCCTCTCTTCTTaGGTCATCTGTTCCACTGGGATCTGCTTGAGGATCACCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLSTWHSFWAACLSS*VICSTGICLRITSF Trigger: GAAGCTGGTGATCCTCAAGCAGATCCCAGTGGAACAGATGACCAAAGAAGAGAGGCAGGCGGCCCAGAACGAGTGCCAGGTGCTCAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
||
| CDS TCA 72 bp | TGTACCGGTCAGAGATGGGTGCGAAGGTGCCACTCATaGTCTTCAGCACCAGGGCTGGCAAGTTTGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CTGQRWVRRCHS*SSAPGLASLQP Trigger: AGGCTGCAAACTTGCCAGCCCTGGTGCTGAAGATCATGAGTGGCACCTTCGCACCCATCTCTGACCGGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017549.13 ENSMUST00000148154.3 |
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| CDS CAA 72 bp | ACCTGGCACTCGTTCTGGGCCGCCTGCCTCTCTTCTTaGGTCATCTGTTCCACTGGGATCTGCTTGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: TWHSFWAACLSS*VICSTGICLRI Trigger: GATCCTCAAGCAGATCCCAGTGGAACAGATGACCAAAGAAGAGAGGCAGGCGGCCCAGAACGAGTGCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CAA 72 bp | GCTGACCCTGCGGGAACTGGTGCCCAGCTGTCCATGTaGATTGCTGCCAAAAGTATAGCAGTCCCCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: ADPAGTGAQLSM*IAAKSIAVPRS Trigger: GCTTCTGGGGACTGCTATACTTTTGGCAGCAATCAACATGGACAGCTGGGCACCAGTTCCCGCAGGGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 72 bp | TCTCTTCTTTGGTCATCTGTTCCACTGGGATCTGCTTaGGGATCACCAGCTTCTGGTCGGCCTTTCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLLWSSVPLGSA*GSPASGRPFAG Trigger: GCCTGCGAAAGGCCGACCAGAAGCTGGTGATCCTCAAGCAGATCCCAGTGGAACAGATGACCAAAGAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS TCA 72 bp | CATAGCCCAGCAAGGCTTCTACAATGGTGGGCTGGCTaGTGTCAGTCAGGTTGCCGTGACCTAAACACCCAT | + |
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Preference number: 6 (lower is better) Translates to: HSPARLLQWWAG*CQSGCRDLNTH Trigger: ATGGGTGTTTAGGTCACGGCAACCTGACTGACATCAGCCAGCCCACCATTGTAGAAGCCTTGCTGGGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CAA 72 bp | ACCATGCGGTGTTTGTCAAGAAGGATGTTCTGTGTCTaGAGGTCCCGATGCAGGATGAGATGTGTGTGCACG | + |
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Preference number: 6 (lower is better) Translates to: TMRCLSRRMFCV*RSRCRMRCVCT Trigger: CGTGCACACACATCTCATCCTGCATCGGGACCTCAAGACACAGAACATCCTTCTTGACAAACACCGCATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CAA 72 bp | CTGCTGAGGATCTTAGAGATGCCAAAGTCACCGATCTaGACCACCATGCGGTGTTTGTCAAGAAGGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLRILEMPKSPI*TTMRCLSRRMF Trigger: GAACATCCTTCTTGACAAACACCGCATGGTGGTCAAGATCGGTGACTTTGGCATCTCTAAGATCCTCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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| CDS CAA 90 bp | TTGCTCTTGCTGCTGAGGATCTTAGAGATGCCAAAGTCACCGATCTaGACCACCATGCGGTGTTTGTCAAGAAGGATGTTCTGTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLLLLRILEMPKSPI*TTMRCLSRRMFCVL Trigger: CAAGACACAGAACATCCTTCTTGACAAACACCGCATGGTGGTCAAGATCGGTGACTTTGGCATCTCTAAGATCCTCAGCAGCAAGAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017549.13 |
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