Pregenerated sensors for NEK7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026393Ensembl transcript IDs: ENSMUST00000027642.5, ENSMUST00000186017.7, ENSMUST00000187407.7
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACAAGTCAAATGCCCAGGTCCTTCCTCAGGTTCTGCATCGCTCTaGACATGTGCCTATGTGTGTGTGCTTCACCATCGGGCACTGACT | + |
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Preference number: 1 (lower is better) Translates to: KQVKCPGPSSGSASL*TCAYVCVLHHRALT Trigger: AGTCAGTGCCCGATGGTGAAGCACACACACATAGGCACATGTCCAGAGCGATGCAGAACCTGAGGAAGGACCTGGGCATTTGACTTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR GCA 90 bp | GTTGCCGTCTTCAGGATCTTGTACAGTTTAGGTGCTTGCGGTACATaGATGCATCCTCTTTGCCACATCATAAACATAGGCGATGTCGGG | + |
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Preference number: 1 (lower is better) Translates to: VAVFRILYSLGACGT*MHPLCHIINIGDVG Trigger: CCCGACATCGCCTATGTTTATGATGTGGCAAAGAGGATGCATGCATGTACCGCAAGCACCTAAACTGTACAAGATCCTGAAGACGGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
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| 3UTR GCA 90 bp | ATCTTGTACAGTTTAGGTGCTTGCGGTACATGCATGCATCCTCTTTaGCACATCATAAACATAGGCGATGTCGGGTCGCTTCTCTGGATC | + |
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Preference number: 1 (lower is better) Translates to: ILYSLGACGTCMHPL*HIINIGDVGSLLWI Trigger: GATCCAGAGAAGCGACCCGACATCGCCTATGTTTATGATGTGGCAAAGAGGATGCATGCATGTACCGCAAGCACCTAAACTGTACAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
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| 3UTR TCA 90 bp | AACCAAGCCATAAAACCGCAGAGCCTCCAGAGAGGTTGTCACTTTTaGCTGTCTCACTGTTTCGGGTTTCTTCAAGATAGCAAAGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: NQAIKPQSLQRGCHF*LSHCFGFLQDSKVL Trigger: CAGGACTTTGCTATCTTGAAGAAACCCGAAACAGTGAGACAGTCAAAAGTGACAACCTCTCTGGAGGCTCTGCGGTTTTATGGCTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR CCA 90 bp | TACACAGTACTTTACTCCAAAGCATCTCAACGGGAATGCTGCTCTTaGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCACGCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: YTVLYSKASQRECCS*NSSVFSKGQSSRCS Trigger: TGAACAGCGTGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTGAGATGCTTTGGAGTAAAGTACTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR TCA 90 bp | CGCTCTGGACATGTGCCTATGTGTGTGTGCTTCACCATCGGGCACTaGCTATCTATAAACACAGTCTATCAGCAGAAACTCGAAACAATT | + |
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Preference number: 1 (lower is better) Translates to: RSGHVPMCVCFTIGH*LSINTVYQQKLETI Trigger: AATTGTTTCGAGTTTCTGCTGATAGACTGTGTTTATAGATAGTCAGTGCCCGATGGTGAAGCACACACACATAGGCACATGTCCAGAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR GCA 90 bp | GTTATCTTGGTTGCCGTCTTCAGGATCTTGTACAGTTTAGGTGCTTaGGGTACATGCATGCATCCTCTTTGCCACATCATAAACATAGGC | + |
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Preference number: 1 (lower is better) Translates to: VILVAVFRILYSLGA*GTCMHPLCHIINIG Trigger: GCCTATGTTTATGATGTGGCAAAGAGGATGCATGCATGTACCGCAAGCACCTAAACTGTACAAGATCCTGAAGACGGCAACCAAGATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
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| 3UTR GCA 90 bp | TCATCGTCATACACAGTACTTTACTCCAAAGCATCTCAACGGGAATaGTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: SSSYTVLYSKASQRE*CSWNSSVFSKGQSS Trigger: TGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTGAGATGCTTTGGAGTAAAGTACTGTGTATGACGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR CCA 90 bp | TGTCTCACTGTTTCGGGTTTCTTCAAGATAGCAAAGTCCTGGAACTaGGTAAGAACTGTTTCTGTAGGTTGGGTGCCAAGCATAGCAATG | + |
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Preference number: 1 (lower is better) Translates to: CLTVSGFFKIAKSWN*VRTVSVGWVPSIAM Trigger: CATTGCTATGCTTGGCACCCAACCTACAGAAACAGTTCTTACCCAGTTCCAGGACTTTGCTATCTTGAAGAAACCCGAAACAGTGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR CCA 90 bp | TTTGACTGTCTCACTGTTTCGGGTTTCTTCAAGATAGCAAAGTCCTaGAACTGGGTAAGAACTGTTTCTGTAGGTTGGGTGCCAAGCATA | + |
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Preference number: 1 (lower is better) Translates to: FDCLTVSGFFKIAKS*NWVRTVSVGWVPSI Trigger: TATGCTTGGCACCCAACCTACAGAAACAGTTCTTACCCAGTTCCAGGACTTTGCTATCTTGAAGAAACCCGAAACAGTGAGACAGTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR TCA 90 bp | ATACAAGCCATGGGCTGTAACATTAGCCAATTAACAACTAACTTGTaGAGTCACTTTTACCCTCCTGAGCTCTCTGTTCTCTGGTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: IQAMGCNISQLTTNL*SHFYPPELSVLWLA Trigger: TGCCAACCAGAGAACAGAGAGCTCAGGAGGGTAAAAGTGACTTCACAAGTTAGTTGTTAATTGGCTAATGTTACAGCCCATGGCTTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186017.7 |
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| 3UTR TCA 90 bp | TGGATTGGGAAGGTGATTGAGCCTGGTAGAAAAATGAAGCTCATATaGAAACTGGTTAAGGATTCAAAGCGCATTAGCTCTGAGACAGTA | + |
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Preference number: 1 (lower is better) Translates to: WIGKVIEPGRKMKLI*KLVKDSKRISSETV Trigger: TACTGTCTCAGAGCTAATGCGCTTTGAATCCTTAACCAGTTTTCATATGAGCTTCATTTTTCTACCAGGCTCAATCACCTTCCCAATCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR TCA 90 bp | AAAAATCAGAAGTTCACAATCATGTCCACTACAACGTCCATTAAGTaGCTTAAAAGCAAACAAGTCAAATGCCCAGGTCCTTCCTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: KNQKFTIMSTTTSIK*LKSKQVKCPGPSSG Trigger: ACCTGAGGAAGGACCTGGGCATTTGACTTGTTTGCTTTTAAGTCACTTAATGGACGTTGTAGTGGACATGATTGTGAACTTCTGATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR TCA 90 bp | TTTGAAACTCTAAAGGTTCAAAGCAAGACGATGATCATCCCTTTCTaGCTGTTTGGATGCCTTTTATTCAACGACAGAAAGGGAGACATT | + |
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Preference number: 1 (lower is better) Translates to: FETLKVQSKTMIIPF*LFGCLLFNDRKGDI Trigger: AATGTCTCCCTTTCTGTCGTTGAATAAAAGGCATCCAAACAGTCAGAAAGGGATGATCATCGTCTTGCTTTGAACCTTTAGAGTTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186017.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGCTGTCTGACCGACCCACCGGCAGGATGAGCCTTCCCAATGCTCTACCAATTCTTGGTGCCATCTaGGCATCCCAAAGTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: TGLSDRPTGRMSLPNALPILGAI*ASQSCG Trigger: TCCACAACTTTGGGATGCTCAGATGGCACCAAGAAT...TGGTAGAGCATTGGGAAGGCTCATCCTGCCGGTGGGTCGGTCAGACAGCCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR GCA 90 bp | AGGGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGAAATCCTCCTGCCTCTaGCTCCCGGGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: RVPFIHHPHTSAYQPTLLKSSCL*LPGAGI Trigger: AATCCCAGCACCCGGGAGGCAGAGGCAGGAGGATTT...CAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR GCA 90 bp | GTAAGAAAATCAACCCAGGAGCTCTGTGGGCCAGAGTACAAGCTCCCCAACACAGATGAGCCTTCCCAATaGTCTACCATGGCACACCGT | + |
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Preference number: 2 (lower is better) Translates to: VRKSTQELCGPEYKLPNTDEPSQ*STMAHR Trigger: ACGGTGTGCCATGGTAGAGCATTGGGAAGGCTCATC...TGTGTTGGGGAGCTTGTACTCTGGCCCACAGAGCTCCTGGGTTGATTTTCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR GCA 90 bp | GTAGCAGCGCACCCGCAGAGATGGGGAATGGGAAGTGTTGACTTAAAATTTGAAAAATCCTCCTGCCTCTaGCTCCCGGGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: VAAHPQRWGMGSVDLKFEKSSCL*LPGAGI Trigger: AATCCCAGCACCCGGGAGGCAGAGGCAGGAGGATTT...TTCAAATTTTAAGTCAACACTTCCCATTCCCCATCTCTGCGGGTGCGCTGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000186017.7 |
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| 3UTR-3UTR GCA 90 bp | GTAAGAAAATCAACCCAGGAGCTCTGTGGGCCAGAGTACAAGCTCCCCAACACAGGCTTGCATTCTTGGTaGCATCTGAGCATCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: VRKSTQELCGPEYKLPNTGLHSW*HLSIPK Trigger: CTTTGGGATGCTCAGATGGCACCAAGAATGCAAGCC...TGTGTTGGGGAGCTTGTACTCTGGCCCACAGAGCTCCTGGGTTGATTTTCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGCTGTCTGACCGACCCACCGGCAGGATGAGCCTTCCCAATGCTCTACCAACTTTTAAGTTATCTTaGTTGCCGTCTTCAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: TGLSDRPTGRMSLPNALPTFKLS*LPSSGS Trigger: AGATCCTGAAGACGGCAACCAAGATAACTTAAAAGT...TGGTAGAGCATTGGGAAGGCTCATCCTGCCGGTGGGTCGGTCAGACAGCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR TCA 90 bp | GTAAGAAAATCAACCCAGGAGCTCTGTGGGCCAGAGTACAAGCTCCCCAACACAATTCTTGGTGCCATCTaGGCATCCCAAAGTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VRKSTQELCGPEYKLPNTILGAI*ASQSCG Trigger: TCCACAACTTTGGGATGCTCAGATGGCACCAAGAAT...TGTGTTGGGGAGCTTGTACTCTGGCCCACAGAGCTCCTGGGTTGATTTTCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR CCA 90 bp | AGGGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGAGCATCCCAAAGTTGTaGATTGGGAAGGTGATTGAG | + |
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Preference number: 2 (lower is better) Translates to: RVPFIHHPHTSAYQPTLLSIPKL*IGKVIE Trigger: CTCAATCACCTTCCCAATCCACAACTTTGGGATGCT...CAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR CCA 90 bp | GGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGCAATTTCTTCATGCCTCTaGGTATATCCTATGAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: GTLHSPPPHLSIPTNVTAISSCL*VYPMSH Trigger: GTGGCTCATAGGATATACCCAGAGGCATGAAGAAAT...TGCAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR CCA 90 bp | GGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGCAATGGATTCTTTATTTTaGTGGGGGAGGGTGGATATG | + |
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Preference number: 2 (lower is better) Translates to: GTLHSPPPHLSIPTNVTAMDSLF*WGRVDM Trigger: CATATCCACCCTCCCCCACCAAAATAAAGAATCCAT...TGCAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR CAA 90 bp | GATCTTGTACAGTTTAGGTGCTTGCGGTACATGCATGCATCCTCTTaGCCACATCATAAACATAGGCGATGTCGGGTCGCTTCTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: DLVQFRCLRYMHASS*PHHKHRRCRVASLD Trigger: ATCCAGAGAAGCGACCCGACATCGCCTATGTTTATGATGTGGCAAAGAGGATGCATGCATGTACCGCAAGCACCTAAACTGTACAAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
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| 3UTR CAA 90 bp | CTCTTGTTGGGCTTGCATTCTTGGTGCCATCTGAGCATCCCAAAGTaGTGGATTGGGAAGGTGATTGAGCCTGGTAGAAAAATGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LLLGLHSWCHLSIPK*WIGKVIEPGRKMKL Trigger: GAGCTTCATTTTTCTACCAGGCTCAATCACCTTCCCAATCCACAACTTTGGGATGCTCAGATGGCACCAAGAATGCAAGCCCAACAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR TCA 90 bp | AGGGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGGTCCAACTCACATTTTaGCCTCTATGCTTTCACATT | + |
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Preference number: 2 (lower is better) Translates to: RVPFIHHPHTSAYQPTLLVQLTF*PLCFHI Trigger: AATGTGAAAGCATAGAGGTCAAAATGTGAGTTGGAC...CAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR GCA 90 bp | GATAGCAAAGTCCTGGAACTGGGTAAGAACTGTTTCTGTAGGTTGGGTGCCAAGATCGCTCTGGACATGTaGCTATGTGTGTGTGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: DSKVLELGKNCFCRLGAKIALDM*LCVCAS Trigger: TGAAGCACACACACATAGGCACATGTCCAGAGCGAT...CTTGGCACCCAACCTACAGAAACAGTTCTTACCCAGTTCCAGGACTTTGCTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTTCTTCAACCCAGGAGCTCTGTaGGCCAGAGTACAAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: GEGGYELRDLKYLKESFFNPGAL*ARVQAP Trigger: GGGAGCTTGTACTCTGGCCCACAGAGCTCCTGGGTT...GAAGAAACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR TCA 90 bp | GATAGCAAAGTCCTGGAACTGGGTAAGAACTGTTTCTGTAGGTTGGGTGCCAAGGGCTCCACAATTCTCTaGAGGAATTGGCTGGTATTA | + |
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Preference number: 2 (lower is better) Translates to: DSKVLELGKNCFCRLGAKGSTIL*RNWLVL Trigger: TAATACCAGCCAATTCCTTCAGAGAATTGTGGAGCC...CTTGGCACCCAACCTACAGAAACAGTTCTTACCCAGTTCCAGGACTTTGCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTGGTGCTTGCGGTACATaGATGCATCCTCTTTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LVGEGGYELRDLKYLKESGACGT*MHPLCH Trigger: GTGGCAAAGAGGATGCATGCATGTACCGCAAGCACC...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
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| 3UTR-3UTR TCA 90 bp | CAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCAAGCCTGGTAGAAAAATaGAGCTCATATGAAAACTGG | + |
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Preference number: 2 (lower is better) Translates to: QRECCSWNSSVFSKGQSSSLVEK*SSYENW Trigger: CCAGTTTTCATATGAGCTTCATTTTTCTACCAGGCT...TGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCCTCCAGAGAGGTTGTCACTTTTGACTGTCTCACTGTTTCGGGTTTCTAAAACCTGGAGTACATaGTATAAGACAGGCGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: AEPPERLSLLTVSLFRVSKTWST*YKTGVL Trigger: CAAAACGCCTGTCTTATATCATGTACTCCAGGTTTT...AGAAACCCGAAACAGTGAGACAGTCAAAAGTGACAACCTCTCTGGAGGCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR CAA 90 bp | AGTTATCTTGGTTGCCGTCTTCAGGATCTTGTACAGTTTAGGTGCTaGCGGTACATGCATGCATCCTCTTTGCCACATCATAAACATAGG | + |
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Preference number: 2 (lower is better) Translates to: SYLGCRLQDLVQFRC*RYMHASSLPHHKHR Trigger: CCTATGTTTATGATGTGGCAAAGAGGATGCATGCATGTACCGCAAGCACCTAAACTGTACAAGATCCTGAAGACGGCAACCAAGATAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
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| 3UTR CAA 90 bp | AGCAGAAACTCGAAACAATTCTCAAACGAAAAACTCTTGTTGGGCTaGCATTCTTGGTGCCATCTGAGCATCCCAAAGTTGTGGATTGGG | + |
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Preference number: 2 (lower is better) Translates to: SRNSKQFSNEKLLLG*HSWCHLSIPKLWIG Trigger: CCCAATCCACAACTTTGGGATGCTCAGATGGCACCAAGAATGCAAGCCCAACAAGAGTTTTTCGTTTGAGAATTGTTTCGAGTTTCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR TCA 90 bp | CAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCAACAACGTCCATTAAGTaGCTTAAAAGCAAACAAGTC | + |
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Preference number: 2 (lower is better) Translates to: QRECCSWNSSVFSKGQSSTTSIK*LKSKQV Trigger: GACTTGTTTGCTTTTAAGTCACTTAATGGACGTTGT...TGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTATCGCTCTGGACATGTaGCTATGTGTGTGTGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LVGEGGYELRDLKYLKESIALDM*LCVCAS Trigger: TGAAGCACACACACATAGGCACATGTCCAGAGCGAT...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR GCA 90 bp | GTAAGAAAATCAACCCAGGAGCTCTGTGGGCCAGAGTACAAGCTCCCCAACACAAAACACAAAGCCTTGTaGATGTTAAACATGACTATC | + |
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Preference number: 2 (lower is better) Translates to: VRKSTQELCGPEYKLPNTKHKAL*MLNMTI Trigger: GATAGTCATGTTTAACATGCACAAGGCTTTGTGTTT...TGTGTTGGGGAGCTTGTACTCTGGCCCACAGAGCTCCTGGGTTGATTTTCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR CCA 90 bp | TCTCAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTAGCTCATATGAAAACTaGTTAAGGATTCAAAGCGCA | + |
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Preference number: 2 (lower is better) Translates to: SQRECCSWNSSVFSKGQSSSYEN*LRIQSA Trigger: TGCGCTTTGAATCCTTAACCAGTTTTCATATGAGCT...AGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR CCA 90 bp | GTAGCAGCGCACCCGCAGAGATGGGGAATGGGAAGTGTTGACTTAAAATTTGAAGATTACTCTGTTCTTTaGCTCCACAATTCTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: VAAHPQRWGMGSVDLKFEDYSVL*LHNSLK Trigger: CTTCAGAGAATTGTGGAGCCAAAGAACAGAGTAATC...TTCAAATTTTAAGTCAACACTTCCCATTCCCCATCTCTGCGGGTGCGCTGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186017.7 |
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| 3UTR-3UTR GCA 90 bp | GTAGCAGCGCACCCGCAGAGATGGGGAATGGGAAGTGTTGACTTAAAATTTGAATTAAGTTATCTTGGTTaGCGTCTTCAGGATCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: VAAHPQRWGMGSVDLKFELSYLG*RLQDLV Trigger: TACAAGATCCTGAAGACGGCAACCAAGATAACTTAA...TTCAAATTTTAAGTCAACACTTCCCATTCCCCATCTCTGCGGGTGCGCTGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186017.7 |
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| 3UTR CAA 90 bp | AGCCACGATTACTCTGTTCTTTGGCTCCACAATTCTCTGAAGGAATaGGCTGGTATTAAGATGAAGACATTCACCAAAATTCCACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SHDYSVLWLHNSLKE*AGIKMKTFTKIPPQ Trigger: CTGAGGTGGAATTTTGGTGAATGTCTTCATCTTAATACCAGCCAATTCCTTCAGAGAATTGTGGAGCCAAAGAACAGAGTAATCGTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTTCTTCGGCTCCACAATTCTCTaGAGGAATTGGCTGGTATTA | + |
|
Preference number: 2 (lower is better) Translates to: GEGGYELRDLKYLKESFFGSTIL*RNWLVL Trigger: TAATACCAGCCAATTCCTTCAGAGAATTGTGGAGCC...GAAGAAACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTGTACAAAGTTAAAGTaGCCATCCCTGACCAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LVGEGGYELRDLKYLKESCTKLK*PSLTSK Trigger: CTTACTGGTCAGGGATGGTCACTTTAACTTTGTACA...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR GCA 90 bp | CAACAGCCACGATTACTCTGTTCTTTGGCTCCACAATTCTCTGAAGGAATTGGCTTAAGTTATCTTGGTTaGCGTCTTCAGGATCTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: QQPRLLCSLAPQFSEGIGLSYLG*RLQDLV Trigger: TACAAGATCCTGAAGACGGCAACCAAGATAACTTAA...GCCAATTCCTTCAGAGAATTGTGGAGCCAAAGAACAGAGTAATCGTGGCTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCACAATCATGTCCACTACAACGTCCATTAAGTGACTTAAAAGCAAACAAGGTCGGGTCGCTTCTCTaGATCTGGGTTGATGCATAT | + |
|
Preference number: 2 (lower is better) Translates to: SSQSCPLQRPLSDLKANKVGSLL*IWVDAY Trigger: ATATGCATCAACCCAGATCCAGAGAAGCGACCCGAC...CTTGTTTGCTTTTAAGTCACTTAATGGACGTTGTAGTGGACATGATTGTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGGGCCAGTCTTCACGCTGTTCAACATACTCTAGAGCATACTCTAAAATTAAGCATCCCAAAGTTGTaGATTGGGAAGGTGATTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VRASLHAVQHTLEHTLKLSIPKL*IGKVIE Trigger: CTCAATCACCTTCCCAATCCACAACTTTGGGATGCT...TAATTTTAGAGTATGCTCTAGAGTATGTTGAACAGCGTGAAGACTGGCCCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGGGCCAGTCTTCACGCTGTTCAACATACTCTAGAGCATACTCTAAAATTAACGAAAAACTCTTGTTaGGCTTGCATTCTTGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: VRASLHAVQHTLEHTLKLTKNSC*ACILGA Trigger: GGCACCAAGAATGCAAGCCCAACAAGAGTTTTTCGT...TAATTTTAGAGTATGCTCTAGAGTATGTTGAACAGCGTGAAGACTGGCCCTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR TCA 90 bp | AAATGTACAATAAAAACACAAAGCCTTGTGCATGTTAAACATGACTATCACGCCATTCTTGGTGCCATCTaGGCATCCCAAAGTTGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KCTIKTQSLVHVKHDYHAILGAI*ASQSCG Trigger: TCCACAACTTTGGGATGCTCAGATGGCACCAAGAAT...GGCGTGATAGTCATGTTTAACATGCACAAGGCTTTGTGTTTTTATTGTACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTTAAGTTATCTTGGTTaGCGTCTTCAGGATCTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LVGEGGYELRDLKYLKESLSYLG*RLQDLV Trigger: TACAAGATCCTGAAGACGGCAACCAAGATAACTTAA...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCACAATCATGTCCACTACAACGTCCATTAAGTGACTTAAAAGCAAACAAGACGAAAAACTCTTGTTaGGCTTGCATTCTTGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SSQSCPLQRPLSDLKANKTKNSC*ACILGA Trigger: GGCACCAAGAATGCAAGCCCAACAAGAGTTTTTCGT...CTTGTTTGCTTTTAAGTCACTTAATGGACGTTGTAGTGGACATGATTGTGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR TCA 90 bp | ACGCCAGGCAAACAAGTCCTTAACCACGTTTTAAAATGGGTTCATTTATACCATGTCCAACTCACATTTTaGCCTCTATGCTTTCACATT | + |
|
Preference number: 2 (lower is better) Translates to: TPGKQVLNHVLKWVHLYHVQLTF*PLCFHI Trigger: AATGTGAAAGCATAGAGGTCAAAATGTGAGTTGGAC...ATGGTATAAATGAACCCATTTTAAAACGTGGTTAAGGACTTGTTTGCCTGGCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTAAACACAAAGCCTTGTaGATGTTAAACATGACTATC | + |
|
Preference number: 2 (lower is better) Translates to: LVGEGGYELRDLKYLKESKHKAL*MLNMTI Trigger: GATAGTCATGTTTAACATGCACAAGGCTTTGTGTTT...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTTCTTCAAACACAAAGCCTTGTaGATGTTAAACATGACTATC | + |
|
Preference number: 2 (lower is better) Translates to: GEGGYELRDLKYLKESFFKHKAL*MLNMTI Trigger: GATAGTCATGTTTAACATGCACAAGGCTTTGTGTTT...GAAGAAACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CCA 90 bp | ACGCCAGGCAAACAAGTCCTTAACCACGTTTTAAAATGGGTTCATTTATACCATACTTTTAAGTTATCTTaGTTGCCGTCTTCAGGATCT | + |
|
Preference number: 2 (lower is better) Translates to: TPGKQVLNHVLKWVHLYHTFKLS*LPSSGS Trigger: AGATCCTGAAGACGGCAACCAAGATAACTTAAAAGT...ATGGTATAAATGAACCCATTTTAAAACGTGGTTAAGGACTTGTTTGCCTGGCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCACAATCATGTCCACTACAACGTCCATTAAGTGACTTAAAAGCAAACAAGACTTTTAAGTTATCTTaGTTGCCGTCTTCAGGATCT | + |
|
Preference number: 2 (lower is better) Translates to: SSQSCPLQRPLSDLKANKTFKLS*LPSSGS Trigger: AGATCCTGAAGACGGCAACCAAGATAACTTAAAAGT...CTTGTTTGCTTTTAAGTCACTTAATGGACGTTGTAGTGGACATGATTGTGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR TCA 72 bp | TGGGCCAGAGTACAAGCTCCCCAACACAGGGCTGTCTaGCCGACCCACCGGCAGGATGAGCCTTCCCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: WARVQAPQHRAV*PTHRQDEPSQC Trigger: GCATTGGGAAGGCTCATCCTGCCGGTGGGTCGGTCAGACAGCCCTGTGTTGGGGAGCTTGTACTCTGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCTCTaGCTCCCGGGTGCTGGGATTAAAGGTGTGTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSSCL*LPGAGIKGVYH Trigger: ATGGTACACACCTTTAATCCCAGCACCCGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTaGCTCTGCCTCCCGGGTGCTGGGATTAAAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSS*LCLPGAGIKGV Trigger: CACACCTTTAATCCCAGCACCCGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGCTGTCTGACCGACCCACCGGCAGGATGAGCCTTCCCAATGCTCTACCAAAACTCTTGTTGGGCTaGCATTCTTGGTGCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: TGLSDRPTGRMSLPNALPKLLLG*HSWCHL Trigger: CAGATGGCACCAAGAATGCAAGCCCAACAAGAGTTT...TGGTAGAGCATTGGGAAGGCTCATCCTGCCGGTGGGTCGGTCAGACAGCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR GCA 72 bp | AGGTCCTTCCTCAGGTTCTGCATCGCTCTGGACATGTaGCTATGTGTGTGTGCTTCACCATCGGGCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RSFLRFCIALDM*LCVCASPSGTD Trigger: GTCAGTGCCCGATGGTGAAGCACACACACATAGGCACATGTCCAGAGCGATGCAGAACCTGAGGAAGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGCTGTCTGACCGACCCACCGGCAGGATGAGCCTTCCCAATGCTCTACCAAACGAAAAACTCTTGTaGGGCTTGCATTCTTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TGLSDRPTGRMSLPNALPNEKLL*GLHSWC Trigger: GCACCAAGAATGCAAGCCCAACAAGAGTTTTTCGTT...TGGTAGAGCATTGGGAAGGCTCATCCTGCCGGTGGGTCGGTCAGACAGCCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR TCA 72 bp | CCTCACATAGGAGAAGAGCAAGCTTATCCATTCCCTTaGGATTCTGGTAGCAGCGCACCCGCAGAGATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PHIGEEQAYPFP*DSGSSAPAEMG Trigger: CCCCATCTCTGCGGGTGCGCTGCTACCAGAATCTCAAGGGAATGGATAAGCTTGCTCTTCTCCTATGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186017.7 |
||
| 3UTR CCA 72 bp | AAATGCCCAGGTCCTTCCTCAGGTTCTGCATCGCTCTaGACATGTGCCTATGTGTGTGTGCTTCACCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: KCPGPSSGSASL*TCAYVCVLHHR Trigger: CCGATGGTGAAGCACACACACATAGGCACATGTCCAGAGCGATGCAGAACCTGAGGAAGGACCTGGGCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CCA 72 bp | AAGTCCTGGAACTGGGTAAGAACTGTTTCTGTAGGTTaGGTGCCAAGCATAGCAATGGGCGATTTGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSWNWVRTVSVG*VPSIAMGDLER Trigger: CCTCTCCAAATCGCCCATTGCTATGCTTGGCACCCAACCTACAGAAACAGTTCTTACCCAGTTCCAGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | GATAGCAAAGTCCTGGAACTGGGTAAGAACTGTTTCTGTAGGTTGGGTGCCAAGCTGAGCATCCCAAAGTaGTGGATTGGGAAGGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: DSKVLELGKNCFCRLGAKLSIPK*WIGKVI Trigger: AATCACCTTCCCAATCCACAACTTTGGGATGCTCAG...CTTGGCACCCAACCTACAGAAACAGTTCTTACCCAGTTCCAGGACTTTGCTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | GGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGCATGTCCAACTCACATTTaGACCTCTATGCTTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: GTLHSPPPHLSIPTNVTACPTHI*TSMLSH Trigger: ATGTGAAAGCATAGAGGTCAAAATGTGAGTTGGACA...TGCAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGCCACGATTACTCTGTTCTTTGGCTCCACAATTCTCTGAAGGAATTGGCCTGAGCATCCCAAAGTaGTGGATTGGGAAGGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: QQPRLLCSLAPQFSEGIGLSIPK*WIGKVI Trigger: AATCACCTTCCCAATCCACAACTTTGGGATGCTCAG...GCCAATTCCTTCAGAGAATTGTGGAGCCAAAGAACAGAGTAATCGTGGCTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCAAACGAAAAACTCTaGTTGGGCTTGCATTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SQRECCSWNSSVFSKGQSSNEKL*LGLHSW Trigger: CCAAGAATGCAAGCCCAACAAGAGTTTTTCGTTTGA...AGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | CAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCATCAAACGAAAAACTCTaGTTGGGCTTGCATTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QRECCSWNSSVFSKGQSSSNEKL*LGLHSW Trigger: CCAAGAATGCAAGCCCAACAAGAGTTTTTCGTTTGA...TGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGAATTCTCTGAAGGAATaGGCTGGTATTAAGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RVPFIHHPHTSAYQPTLLNSLKE*AGIKMK Trigger: CTTCATCTTAATACCAGCCAATTCCTTCAGAGAATT...CAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAGCCTCCAGAGAGGTTGTCACTTTTGACTGTCTCACTGTTTCGGGTTTCTAATGGATTCTTTATTTaGGTGGGGGAGGGTGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: AEPPERLSLLTVSLFRVSNGFFI*VGEGGY Trigger: ATATCCACCCTCCCCCACCAAAATAAAGAATCCATT...AGAAACCCGAAACAGTGAGACAGTCAAAAGTGACAACCTCTCTGGAGGCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | CAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCATTTAAGTTATCTTGGTaGCCGTCTTCAGGATCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: QRECCSWNSSVFSKGQSSFKLSW*PSSGSC Trigger: ACAAGATCCTGAAGACGGCAACCAAGATAACTTAAA...TGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR TCA 72 bp | CATGTGCCTATGTGTGTGTGCTTCACCATCGGGCACTaGCTATCTATAAACACAGTCTATCAGCAGAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: HVPMCVCFTIGH*LSINTVYQQKL Trigger: GAGTTTCTGCTGATAGACTGTGTTTATAGATAGTCAGTGCCCGATGGTGAAGCACACACACATAGGCACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR TCA 72 bp | ACACTAAGGAACAGCAGAGCGCTCGCAACTTGCCGGTaGCATCTCAGTAACTTTACAATCATTGGACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLRNSRALATCR*HLSNFTIIGHS Trigger: AGAATGTCCAATGATTGTAAAGTTACTGAGATGTCACCGGCAAGTTGCGAGCGCTCTGCTGTTCCTTAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR TCA 72 bp | ATAAAACCGCAGAGCCTCCAGAGAGGTTGTCACTTTTaGCTGTCTCACTGTTTCGGGTTTCTTCAAGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: IKPQSLQRGCHF*LSHCFGFLQDS Trigger: GCTATCTTGAAGAAACCCGAAACAGTGAGACAGTCAAAAGTGACAACCTCTCTGGAGGCTCTGCGGTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR GCA 72 bp | TCAAACGAAAAACTCTTGTTGGGCTTGCATTCTTGGTaGCATCTGAGCATCCCAAAGTTGTGGATTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SNEKLLLGLHSW*HLSIPKLWIGK Trigger: CTTCCCAATCCACAACTTTGGGATGCTCAGATGGCACCAAGAATGCAAGCCCAACAAGAGTTTTTCGTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR GCA 72 bp | TACACAGTACTTTACTCCAAAGCATCTCAACGGGAATaGTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: YTVLYSKASQRE*CSWNSSVFSKG Trigger: GCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTGAGATGCTTTGGAGTAAAGTACTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CCA 72 bp | CTCACTGTTTCGGGTTTCTTCAAGATAGCAAAGTCCTaGAACTGGGTAAGAACTGTTTCTGTAGGTTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LTVSGFFKIAKS*NWVRTVSVGWV Trigger: CACCCAACCTACAGAAACAGTTCTTACCCAGTTCCAGGACTTTGCTATCTTGAAGAAACCCGAAACAGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CCA 72 bp | GAGAGAAGAGATGAAGCTAAAGCCCAAGACGACACATaGGAATTTGCTCCTCAGCCATGTATTACATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ERRDEAKAQDDT*EFAPQPCITCG Trigger: ACCACATGTAATACATGGCTGAGGAGCAAATTCCCATGTGTCGTCTTGGGCTTTAGCTTCATCTCTTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186017.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTAAACTCTTGTTGGGCTaGCATTCTTGGTGCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVGEGGYELRDLKYLKESKLLLG*HSWCHL Trigger: CAGATGGCACCAAGAATGCAAGCCCAACAAGAGTTT...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR GCA 72 bp | TTCAGGATCTTGTACAGTTTAGGTGCTTGCGGTACATaGATGCATCCTCTTTGCCACATCATAAACATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FRILYSLGACGT*MHPLCHIINIG Trigger: GCCTATGTTTATGATGTGGCAAAGAGGATGCATGCATGTACCGCAAGCACCTAAACTGTACAAGATCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGGGCCAGTCTTCACGCTGTTCAACATACTCTAGAGCATACTCTAAAATTAAAACTCTTGTTGGGCTaGCATTCTTGGTGCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: VRASLHAVQHTLEHTLKLKLLLG*HSWCHL Trigger: CAGATGGCACCAAGAATGCAAGCCCAACAAGAGTTT...TAATTTTAGAGTATGCTCTAGAGTATGTTGAACAGCGTGAAGACTGGCCCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CCA 72 bp | TCCTGTGACATTACAATGGATATAACACAACACAAATaGTCACCGGAAGCCATTTCTTCATGCCTCTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SCDITMDITQHK*SPEAISSCLWV Trigger: TACCCAGAGGCATGAAGAAATGGCTTCCGGTGACCATTTGTGTTGTGTTATATCCATTGTAATGTCACAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAAAGCGCATTAGCTCTGAGACAGTAATCTTAACACCCAGACATAAGCGGTTTAAGTTATCTTGGTaGCCGTCTTCAGGATCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: DSKRISSETVILTPRHKRFKLSW*PSSGSC Trigger: ACAAGATCCTGAAGACGGCAACCAAGATAACTTAAA...CCGCTTATGTCTGGGTGTTAAGATTACTGTCTCAGAGCTAATGCGCTTTGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | ACGCCAGGCAAACAAGTCCTTAACCACGTTTTAAAATGGGTTCATTTATACCATCTGAGCATCCCAAAGTaGTGGATTGGGAAGGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: TPGKQVLNHVLKWVHLYHLSIPK*WIGKVI Trigger: AATCACCTTCCCAATCCACAACTTTGGGATGCTCAG...ATGGTATAAATGAACCCATTTTAAAACGTGGTTAAGGACTTGTTTGCCTGGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTCAAACGAAAAACTCTaGTTGGGCTTGCATTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LVGEGGYELRDLKYLKESSNEKL*LGLHSW Trigger: CCAAGAATGCAAGCCCAACAAGAGTTTTTCGTTTGA...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CCA 72 bp | TCAAAGCAAGACGATGATCATCCCTTTCTGACTGTTTaGATGCCTTTTATTCAACGACAGAAAGGGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: SKQDDDHPFLTV*MPFIQRQKGRH Trigger: ATGTCTCCCTTTCTGTCGTTGAATAAAAGGCATCCAAACAGTCAGAAAGGGATGATCATCGTCTTGCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186017.7 |
||
| 3UTR-3UTR CAA 90 bp | AAATGTACAATAAAAACACAAAGCCTTGTGCATGTTAAACATGACTATCACGCCAACGAAAAACTCTTGTaGGGCTTGCATTCTTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KCTIKTQSLVHVKHDYHANEKLL*GLHSWC Trigger: GCACCAAGAATGCAAGCCCAACAAGAGTTTTTCGTT...GGCGTGATAGTCATGTTTAACATGCACAAGGCTTTGTGTTTTTATTGTACATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR-3UTR CAA 90 bp | ACGCCAGGCAAACAAGTCCTTAACCACGTTTTAAAATGGGTTCATTTATACCATTGTCCAACTCACATTTaGACCTCTATGCTTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: TPGKQVLNHVLKWVHLYHCPTHI*TSMLSH Trigger: ATGTGAAAGCATAGAGGTCAAAATGTGAGTTGGACA...ATGGTATAAATGAACCCATTTTAAAACGTGGTTAAGGACTTGTTTGCCTGGCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR TCA 72 bp | AAGGTGATTGAGCCTGGTAGAAAAATGAAGCTCATATaGAAACTGGTTAAGGATTCAAAGCGCATTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KVIEPGRKMKLI*KLVKDSKRISS Trigger: AGAGCTAATGCGCTTTGAATCCTTAACCAGTTTTCATATGAGCTTCATTTTTCTACCAGGCTCAATCACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR GCA 72 bp | ATGATCTGCACAAAAACACTTTTAAGTTATCTTGGTTaGCGTCTTCAGGATCTTGTACAGTTTAGGTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: MICTKTLLSYLG*RLQDLVQFRCL Trigger: CAAGCACCTAAACTGTACAAGATCCTGAAGACGGCAACCAAGATAACTTAAAAGTGTTTTTGTGCAGATCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTAACAGCTTCTTGGTTATAATAAATAGAGACAAAGTTCAGAGCAAAACCTGTCCAACTCACATTTaGACCTCTATGCTTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: VSNSFLVIINRDKVQSKTCPTHI*TSMLSH Trigger: ATGTGAAAGCATAGAGGTCAAAATGTGAGTTGGACA...GGTTTTGCTCTGAACTTTGTCTCTATTTATTATAACCAAGAAGCTGTTACTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR GCA 90 bp | TCTGCATCGCTCTGGACATGTGCCTATGTGTGTGTGCTTCACCATCGGGCACTGGGTGCTTGCGGTACATaGATGCATCCTCTTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SASLWTCAYVCVLHHRALGACGT*MHPLCH Trigger: GTGGCAAAGAGGATGCATGCATGTACCGCAAGCACC...CAGTGCCCGATGGTGAAGCACACACACATAGGCACATGTCCAGAGCGATGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | CAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCACTCCGAATAGTGATCTaGCGGGAGAGGCGGGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRECCSWNSSVFSKGQSSLRIVI*RERRVV Trigger: GACTACCCGCCTCTCCCGTCAGATCACTATTCGGAG...TGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCTGTCTGACCGACCCACCGGCAGGATGAGCCTTCCCAATGCTCTACCATTATATCTCTGTGCATaGCTCTTCGAGAATGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TGLSDRPTGRMSLPNALPLYLCA*LFENAC Trigger: ACATGCATTCTCGAAGAGTCATGCACAGAGATATAA...TGGTAGAGCATTGGGAAGGCTCATCCTGCCGGTGGGTCGGTCAGACAGCCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | GGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGCAGTCGGGTCGCTTCTCTaGATCTGGGTTGATGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GTLHSPPPHLSIPTNVTAVGSLL*IWVDAY Trigger: ATATGCATCAACCCAGATCCAGAGAAGCGACCCGAC...TGCAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR GCA 90 bp | GTAAGAAAATCAACCCAGGAGCTCTGTGGGCCAGAGTACAAGCTCCCCAACACAGTAACGGGCGGCCCTTaGATTCCTTGTGATTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRKSTQELCGPEYKLPNTVTGGP*IPCDCS Trigger: TGAACAATCACAAGGAATGCAAGGGCCGCCCGTTAC...TGTGTTGGGGAGCTTGTACTCTGGCCCACAGAGCTCCTGGGTTGATTTTCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | GCTTGCGGTACATGCATGCATCCTCTTTGCCACATCATAAACATAGGCGATGTCCTTCGAGAATGCATGTaGTCCAGTGCACTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACGTCMHPLCHIINIGDVLRECM*SSALQS Trigger: GCTCTGCAGTGCACTGGACCACATGCATTCTCGAAG...GACATCGCCTATGTTTATGATGTGGCAAAGAGGATGCATGCATGTACCGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
||
| CDS-3UTR CCA 90 bp | GATAGCAAAGTCCTGGAACTGGGTAAGAACTGTTTCTGTAGGTTGGGTGCCAAGCTTCGAGAATGCATGTaGTCCAGTGCACTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSKVLELGKNCFCRLGAKLRECM*SSALQS Trigger: GCTCTGCAGTGCACTGGACCACATGCATTCTCGAAG...CTTGGCACCCAACCTACAGAAACAGTTCTTACCCAGTTCCAGGACTTTGCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CAA 72 bp | CAGTTTAGGTGCTTGCGGTACATGCATGCATCCTCTTaGCCACATCATAAACATAGGCGATGTCGGGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QFRCLRYMHASS*PHHKHRRCRVA Trigger: AGCGACCCGACATCGCCTATGTTTATGATGTGGCAAAGAGGATGCATGCATGTACCGCAAGCACCTAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027642.5 |
||
| CDS-3UTR TCA 90 bp | TCTCAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTAGTGCACTGCAGAGCTaGACGAAGTATTTCCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: SQRECCSWNSSVFSKGQSSALQS*TKYFQT Trigger: CGTTTGGAAATACTTCGTTCAGCTCTGCAGTGCACT...AGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCCTCCAGAGAGGTTGTCACTTTTGACTGTCTCACTGTTTCGGGTTTCTAGTGCACTGCAGAGCTaGACGAAGTATTTCCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: AEPPERLSLLTVSLFRVSSALQS*TKYFQT Trigger: CGTTTGGAAATACTTCGTTCAGCTCTGCAGTGCACT...AGAAACCCGAAACAGTGAGACAGTCAAAAGTGACAACCTCTCTGGAGGCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CAA 72 bp | GGCTTGCATTCTTGGTGCCATCTGAGCATCCCAAAGTaGTGGATTGGGAAGGTGATTGAGCCTGGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLHSWCHLSIPK*WIGKVIEPGRK Trigger: TTTTCTACCAGGCTCAATCACCTTCCCAATCCACAACTTTGGGATGCTCAGATGGCACCAAGAATGCAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTTCTTCCTCCGAATAGTGATCTaGCGGGAGAGGCGGGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GEGGYELRDLKYLKESFFLRIVI*RERRVV Trigger: GACTACCCGCCTCTCCCGTCAGATCACTATTCGGAG...GAAGAAACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCCTCCAGAGAGGTTGTCACTTTTGACTGTCTCACTGTTTCGGGTTTCTGGAGGTCTATTTCTTTaGTACAATCAGCACGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEPPERLSLLTVSLFRVSGGLFL*YNQHVL Trigger: AAGCACGTGCTGATTGTATCAAAGAAATAGACCTCC...AGAAACCCGAAACAGTGAGACAGTCAAAAGTGACAACCTCTCTGGAGGCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | GGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGCAACCAGATGTCAGACTTaGAGTTGTATCCATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTLHSPPPHLSIPTNVTATRCQT*SCIHFH Trigger: ATGAAAATGGATACAACTTCAAGTCTGACATCTGGT...TGCAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CAA 72 bp | CACCGTGTTCTGCAACAGCCACGATTACTCTGTTCTTaGGCTCCACAATTCTCTGAAGGAATTGGCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HRVLQQPRLLCS*APQFSEGIGWY Trigger: ATACCAGCCAATTCCTTCAGAGAATTGTGGAGCCAAAGAACAGAGTAATCGTGGCTGTTGCAGAACACGGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CAA 72 bp | AAACCAAGCCATAAAACCGCAGAGCCTCCAGAGAGGTaGTCACTTTTGACTGTCTCACTGTTTCGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSHKTAEPPER*SLLTVSLFRVS Trigger: AGAAACCCGAAACAGTGAGACAGTCAAAAGTGACAACCTCTCTGGAGGCTCTGCGGTTTTATGGCTTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | CAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCATTATATCTCTGTGCATaGCTCTTCGAGAATGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QRECCSWNSSVFSKGQSSLYLCA*LFENAC Trigger: ACATGCATTCTCGAAGAGTCATGCACAGAGATATAA...TGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR GCA 90 bp | GATTCAAAGCGCATTAGCTCTGAGACAGTAATCTTAACACCCAGACATAAGCGGATGACTCTTCGAGAATaGATGTGGTCCAGTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DSKRISSETVILTPRHKRMTLRE*MWSSAL Trigger: CAGTGCACTGGACCACATGCATTCTCGAAGAGTCAT...CCGCTTATGTCTGGGTGTTAAGATTACTGTCTCAGAGCTAATGCGCTTTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR GCA 90 bp | GTAAGGGCCAGTCTTCACGCTGTTCAACATACTCTAGAGCATACTCTAAAATTAGGTGCTTGCGGTACATaGATGCATCCTCTTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRASLHAVQHTLEHTLKLGACGT*MHPLCH Trigger: GTGGCAAAGAGGATGCATGCATGTACCGCAAGCACC...TAATTTTAGAGTATGCTCTAGAGTATGTTGAACAGCGTGAAGACTGGCCCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | GGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGCATTTCTATTCGGAAGTTaGCTAAAGTATTATAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTLHSPPPHLSIPTNVTAFLFGS*LKYYSP Trigger: TGGGCTATAATACTTTAGCCAACTTCCGAATAGAAA...TGCAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCGCATTAGCTCTGAGACAGTAATCTTAACACCCAGACATAAGCGGGGAGGAGGTCTATTTCTTTaGTACAATCAGCACGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKRISSETVILTPRHKRGGGLFL*YNQHVL Trigger: AAGCACGTGCTGATTGTATCAAAGAAATAGACCTCC...TCCCCGCTTATGTCTGGGTGTTAAGATTACTGTCTCAGAGCTAATGCGCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR GCA 90 bp | CAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCAATCCAAGAGACAGGATaGTCTATAAACTTCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRECCSWNSSVFSKGQSSIQETG*SINFTK Trigger: TTTAGTGAAGTTTATAGAGCATCCTGTCTCTTGGAT...TGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTTCTTCATGACTCTTCGAGAATaGATGTGGTCCAGTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGGYELRDLKYLKESFFMTLRE*MWSSAL Trigger: CAGTGCACTGGACCACATGCATTCTCGAAGAGTCAT...GAAGAAACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | TCTCAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTTTCTATTCGGAAGTTaGCTAAAGTATTATAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQRECCSWNSSVFSKGQSFLFGS*LKYYSP Trigger: TGGGCTATAATACTTTAGCCAACTTCCGAATAGAAA...AGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | CAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTTCAAATCAGCACGTGCTTTaGCATCCATTAAATCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QRECCSWNSSVFSKGQSSNQHVL*HPLNQI Trigger: TATTTGATTTAATGGATGCCAAAGCACGTGCTGATT...TGAAGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | AATTATAACCCTGCCAAACAATATCGACATTCACAGGCACATTTTAACACACACCTTCGAGAATGCATGTaGTCCAGTGCACTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NYNPAKQYRHSQAHFNTHLRECM*SSALQS Trigger: GCTCTGCAGTGCACTGGACCACATGCATTCTCGAAG...GTGTGTGTTAAAATGTGCCTGTGAATGTCGATATTGTTTGGCAGGGTTATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | CAACAGCCACGATTACTCTGTTCTTTGGCTCCACAATTCTCTGAAGGAATTGGCACCAGATGTCAGACTTaGAGTTGTATCCATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQPRLLCSLAPQFSEGIGTRCQT*SCIHFH Trigger: ATGAAAATGGATACAACTTCAAGTCTGACATCTGGT...GCCAATTCCTTCAGAGAATTGTGGAGCCAAAGAACAGAGTAATCGTGGCTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | CATCGGGCACTGACTATCTATAAACACAGTCTATCAGCAGAAACTCGAAACAATGGAGGTCTATTTCTTTaGTACAATCAGCACGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRALTIYKHSLSAETRNNGGLFL*YNQHVL Trigger: AAGCACGTGCTGATTGTATCAAAGAAATAGACCTCC...ATTGTTTCGAGTTTCTGCTGATAGACTGTGTTTATAGATAGTCAGTGCCCGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR TCA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTTATATCTCTGTGCATaGCTCTTCGAGAATGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVGEGGYELRDLKYLKESLYLCA*LFENAC Trigger: ACATGCATTCTCGAAGAGTCATGCACAGAGATATAA...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR GCA 90 bp | GTGAGTAACAGCTTCTTGGTTATAATAAATAGAGACAAAGTTCAGAGCAAAACCGTAACGGGCGGCCCTTaGATTCCTTGTGATTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSNSFLVIINRDKVQSKTVTGGP*IPCDCS Trigger: TGAACAATCACAAGGAATGCAAGGGCCGCCCGTTAC...GGTTTTGCTCTGAACTTTGTCTCTATTTATTATAACCAAGAAGCTGTTACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR GCA 90 bp | AGTTCACAATCATGTCCACTACAACGTCCATTAAGTGACTTAAAAGCAAACAAGATGACTCTTCGAGAATaGATGTGGTCCAGTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSQSCPLQRPLSDLKANKMTLRE*MWSSAL Trigger: CAGTGCACTGGACCACATGCATTCTCGAAGAGTCAT...CTTGTTTGCTTTTAAGTCACTTAATGGACGTTGTAGTGGACATGATTGTGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTTCATGTATTCTCTCTaGAGACATGTAGTAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVGEGGYELRDLKYLKESFMYSL*RHVVRC Trigger: ACACCTTACTACATGTCTCCAGAGAGAATACATGAA...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | GGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTTTCTTCTCGCTTCTCTGGATCTaGGTTGATGCATATATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GEGGYELRDLKYLKESFFSLLWI*VDAYIN Trigger: GTTAATATATGCATCAACCCAGATCCAGAGAAGCGA...GAAGAAACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | CATCGGGCACTGACTATCTATAAACACAGTCTATCAGCAGAAACTCGAAACAATTCGCTTCTCTGGATCTaGGTTGATGCATATATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRALTIYKHSLSAETRNNSLLWI*VDAYIN Trigger: GTTAATATATGCATCAACCCAGATCCAGAGAAGCGA...ATTGTTTCGAGTTTCTGCTGATAGACTGTGTTTATAGATAGTCAGTGCCCGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR GCA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTATCCAAGAGACAGGATaGTCTATAAACTTCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVGEGGYELRDLKYLKESIQETG*SINFTK Trigger: TTTAGTGAAGTTTATAGAGCATCCTGTCTCTTGGAT...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| CDS-3UTR CCA 90 bp | TTGGTGGGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTTGAAAGAAAGTAATCAGCACGTGCTTTaGCATCCATTAAATCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LVGEGGYELRDLKYLKESNQHVL*HPLNQI Trigger: TATTTGATTTAATGGATGCCAAAGCACGTGCTGATT...ACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCCCACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
||
| 3UTR CAA 72 bp | GGGGAGGGTGGATATGAACTGAGGGACTTAAAGTATTaGAAAGAAAGTTTCTTCTTGTACAAAGTTAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGGYELRDLKY*KESFFLYKVKV Trigger: CACTTTAACTTTGTACAAGAAGAAACTTTCTTTCAAATACTTTAAGTCCCTCAGTTCATATCCACCCTCCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CCA 90 bp | AGTTCACAATCATGTCCACTACAACGTCCATTAAGTGACTTAAAAGCAAACAAGTTCATGTATTCTCTCTaGAGACATGTAGTAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SSQSCPLQRPLSDLKANKFMYSL*RHVVRC Trigger: ACACCTTACTACATGTCTCCAGAGAGAATACATGAA...CTTGTTTGCTTTTAAGTCACTTAATGGACGTTGTAGTGGACATGATTGTGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CCA 90 bp | AATTATAACCCTGCCAAACAATATCGACATTCACAGGCACATTTTAACACACACTTAATTACATTTGGATaGTTGAGTTGCTTAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NYNPAKQYRHSQAHFNTHLITFG*LSCLRR Trigger: CCTCCTTAAGCAACTCAACCATCCAAATGTAATTAA...GTGTGTGTTAAAATGTGCCTGTGAATGTCGATATTGTTTGGCAGGGTTATAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR GCA 90 bp | GTGAGTAACAGCTTCTTGGTTATAATAAATAGAGACAAAGTTCAGAGCAAAACCATCCAAGAGACAGGATaGTCTATAAACTTCACTAAA | + |
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Preference number: 4 (lower is better) Translates to: VSNSFLVIINRDKVQSKTIQETG*SINFTK Trigger: TTTAGTGAAGTTTATAGAGCATCCTGTCTCTTGGAT...GGTTTTGCTCTGAACTTTGTCTCTATTTATTATAACCAAGAAGCTGTTACTCAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | ACAGGGCTGTCTGACCGACCCACCGGCAGGATGAGCCTTCCCAATGCTCTACCAAGGAGGTCTATTTCTTaGATACAATCAGCACGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TGLSDRPTGRMSLPNALPRRSIS*IQSARA Trigger: AGCACGTGCTGATTGTATCAAAGAAATAGACCTCCT...TGGTAGAGCATTGGGAAGGCTCATCCTGCCGGTGGGTCGGTCAGACAGCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | TCTGCATCGCTCTGGACATGTGCCTATGTGTGTGTGCTTCACCATCGGGCACTGAGGAGGTCTATTTCTTaGATACAATCAGCACGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SASLWTCAYVCVLHHRALRRSIS*IQSARA Trigger: AGCACGTGCTGATTGTATCAAAGAAATAGACCTCCT...CAGTGCCCGATGGTGAAGCACACACACATAGGCACATGTCCAGAGCGATGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | AGGGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGATTACATTTGGATGGTaGAGTTGCTTAAGGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RVPFIHHPHTSAYQPTLLITFGW*SCLRRS Trigger: AGACCTCCTTAAGCAACTCAACCATCCAAATGTAAT...CAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | GGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGCAATTACATTTGGATGGTaGAGTTGCTTAAGGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GTLHSPPPHLSIPTNVTAITFGW*SCLRRS Trigger: AGACCTCCTTAAGCAACTCAACCATCCAAATGTAAT...TGCAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | GGTACCCTTCATTCACCACCCCCACACCTCAGCATACCAACCAACGTTACTGCATTCTCTGGATCTGGGTaGATGCATATATTAACTAGC | + |
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Preference number: 5 (lower is better) Translates to: GTLHSPPPHLSIPTNVTAFSGSG*MHILTS Trigger: GCTAGTTAATATATGCATCAACCCAGATCCAGAGAA...TGCAGTAACGTTGGTTGGTATGCTGAGGTGTGGGGGTGGTGAATGAAGGGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | TCTCAACGGGAATGCTGCTCTTGGAACAGTTCTGTCTTCAGTAAGGGCCAGTCTATTACATTTGGATGGTaGAGTTGCTTAAGGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SQRECCSWNSSVFSKGQSITFGW*SCLRRS Trigger: AGACCTCCTTAAGCAACTCAACCATCCAAATGTAAT...AGACTGGCCCTTACTGAAGACAGAACTGTTCCAAGAGCAGCATTCCCGTTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | GATTCAAAGCGCATTAGCTCTGAGACAGTAATCTTAACACCCAGACATAAGCGGCAATCAGCACGTGCTTaGGCATCCATTAAATCAAAT | + |
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Preference number: 5 (lower is better) Translates to: DSKRISSETVILTPRHKRQSARA*ASIKSN Trigger: ATTTGATTTAATGGATGCCAAAGCACGTGCTGATTG...CCGCTTATGTCTGGGTGTTAAGATTACTGTCTCAGAGCTAATGCGCTTTGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | GTAAGGGCCAGTCTTCACGCTGTTCAACATACTCTAGAGCATACTCTAAAATTACAATCAGCACGTGCTTaGGCATCCATTAAATCAAAT | + |
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Preference number: 5 (lower is better) Translates to: VRASLHAVQHTLEHTLKLQSARA*ASIKSN Trigger: ATTTGATTTAATGGATGCCAAAGCACGTGCTGATTG...TAATTTTAGAGTATGCTCTAGAGTATGTTGAACAGCGTGAAGACTGGCCCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | GTGAGTAACAGCTTCTTGGTTATAATAAATAGAGACAAAGTTCAGAGCAAAACCCAATCAGCACGTGCTTaGGCATCCATTAAATCAAAT | + |
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Preference number: 5 (lower is better) Translates to: VSNSFLVIINRDKVQSKTQSARA*ASIKSN Trigger: ATTTGATTTAATGGATGCCAAAGCACGTGCTGATTG...GGTTTTGCTCTGAACTTTGTCTCTATTTATTATAACCAAGAAGCTGTTACTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS-3UTR CAA 90 bp | GTGAGTAACAGCTTCTTGGTTATAATAAATAGAGACAAAGTTCAGAGCAAAACCTTCTCTGGATCTGGGTaGATGCATATATTAACTAGC | + |
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Preference number: 5 (lower is better) Translates to: VSNSFLVIINRDKVQSKTFSGSG*MHILTS Trigger: GCTAGTTAATATATGCATCAACCCAGATCCAGAGAA...GGTTTTGCTCTGAACTTTGTCTCTATTTATTATAACCAAGAAGCTGTTACTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS TCA 72 bp | CCCATATCTGGCCGTAATGCCTTCTGTGGCTGGAACTaGGTAACGGGCGGCCCTTGCATTCCTTGTGATTGT | + |
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Preference number: 6 (lower is better) Translates to: PISGRNAFCGWN*VTGGPCIPCDC Trigger: ACAATCACAAGGAATGCAAGGGCCGCCCGTTACTCAGTTCCAGCCACAGAAGGCATTACGGCCAGATATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS CCA 72 bp | ATTGTCCACGACCAATTTTCTTTTCTATTCGGAAGTTaGCTAAAGTATTATAGCCCATATCTGGCCGTAATG | + |
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Preference number: 6 (lower is better) Translates to: IVHDQFSFLFGS*LKYYSPYLAVM Trigger: CATTACGGCCAGATATGGGCTATAATACTTTAGCCAACTTCCGAATAGAAAAGAAAATTGGTCGTGGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS CAA 72 bp | TTTGGATGGTTGAGTTGCTTAAGGAGGTCTATTTCTTaGATACAATCAGCACGTGCTTTGGCATCCATTAAA | + |
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Preference number: 6 (lower is better) Translates to: FGWLSCLRRSIS*IQSARALASIK Trigger: TTTAATGGATGCCAAAGCACGTGCTGATTGTATCAAAGAAATAGACCTCCTTAAGCAACTCAACCATCCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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| CDS CAA 72 bp | ATCCAAGAGACAGGATGCTCTATAAACTTCACTAAATaGTCCACGACCAATTTTCTTTTCTATTCGGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: IQETGCSINFTK*STTNFLFYSEV Trigger: AACTTCCGAATAGAAAAGAAAATTGGTCGTGGACAATTTAGTGAAGTTTATAGAGCATCCTGTCTCTTGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027642.5 ENSMUST00000186017.7 ENSMUST00000187407.7 |
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