Pregenerated sensors for NEK5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037738Ensembl transcript IDs: ENSMUST00000169834.2, ENSMUST00000209656.2, ENSMUST00000210824.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCATCATCCGGCATGGTGGGGCAGGTGGAGGTGACATCTGCCATTaGCATTATTCGCAGCAGAGTGTGAGGTGCCCCGGCATCCCACTG | + |
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Preference number: 1 (lower is better) Translates to: AIIRHGGAGGGDICH*HYSQQSVRCPGIPL Trigger: CAGTGGGATGCCGGGGCACCTCACACTCTGCTGCGAATAATGGCAATGGCAGATGTCACCTCCACCTGCCCCACCATGCCGGATGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR GCA 90 bp | CACTTGGCCATCATCCGGCATGGTGGGGCAGGTGGAGGTGACATCTaGCATTGCCATTATTCGCAGCAGAGTGTGAGGTGCCCCGGCATC | + |
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Preference number: 1 (lower is better) Translates to: HLAIIRHGGAGGGDI*HCHYSQQSVRCPGI Trigger: GATGCCGGGGCACCTCACACTCTGCTGCGAATAATGGCAATGGCAGATGTCACCTCCACCTGCCCCACCATGCCGGATGATGGCCAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 90 bp | TGTGAGGTGCCCCGGCATCCCACTGCCTCCTGTTCTCTGCGGCAATaGCATCCTGCTTCTGGGCCACAGAGTTCTTCAAAGGCTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: CEVPRHPTASCSLRQ*HPASGPQSSSKALS Trigger: AGACAGAGCCTTTGAAGAACTCTGTGGCCCAGAAGCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGATGCCGGGGCACCTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 90 bp | GCAGACAGGTTCATGGGCTACGGTTTCTCCTTTACTGGCAGACAATaGGCCACTGCAGGCACACTCTGCTGCCAAAGCACACGGGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: ADRFMGYGFSFTGRQ*ATAGTLCCQSTRGP Trigger: GGGACCCCGTGTGCTTTGGCAGCAGAGTGTGCCTGCAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCGTAGCCCATGAACCTGTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 90 bp | TCACAATCACTTGGCCATCATCCGGCATGGTGGGGCAGGTGGAGGTaGCATCTGCCATTGCCATTATTCGCAGCAGAGTGTGAGGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: SQSLGHHPAWWGRWR*HLPLPLFAAECEVP Trigger: GGGCACCTCACACTCTGCTGCGAATAATGGCAATGGCAGATGTCACCTCCACCTGCCCCACCATGCCGGATGATGGCCAAGTGATTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR GCA 90 bp | GCCCCGGCATCCCACTGCCTCCTGTTCTCTGCGGCAATGACATCCTaGTTCTGGGCCACAGAGTTCTTCAAAGGCTCTGTCTGTATAGTC | + |
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Preference number: 1 (lower is better) Translates to: APASHCLLFSAAMTS*FWATEFFKGSVCIV Trigger: GACTATACAGACAGAGCCTTTGAAGAACTCTGTGGCCCAGAAGCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGATGCCGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR GCA 90 bp | TCTGCTGCCAAAGCACACGGGGTCCCTGGCACATCCAGCCACCACTaGTTCCCATTCTCTACACTGCCTTCCATCACAATCACTTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SAAKAHGVPGTSSHH*FPFSTLPSITITWP Trigger: TGGCCAAGTGATTGTGATGGAAGGCAGTGTAGAGAATGGGAAGCAGTGGTGGCTGGATGTGCCAGGGACCCCGTGTGCTTTGGCAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR GCA 90 bp | GTTCATGGGCTACGGTTTCTCCTTTACTGGCAGACAATGAGCCACTaGAGGCACACTCTGCTGCCAAAGCACACGGGGTCCCTGGCACAT | + |
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Preference number: 1 (lower is better) Translates to: VHGLRFLLYWQTMSH*RHTLLPKHTGSLAH Trigger: ATGTGCCAGGGACCCCGTGTGCTTTGGCAGCAGAGTGTGCCTGCAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCGTAGCCCATGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CCA 90 bp | CACCACTGCTTCCCATTCTCTACACTGCCTTCCATCACAATCACTTaGCCATCATCCGGCATGGTGGGGCAGGTGGAGGTGACATCTGCC | + |
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Preference number: 1 (lower is better) Translates to: HHCFPFSTLPSITIT*PSSGMVGQVEVTSA Trigger: GGCAGATGTCACCTCCACCTGCCCCACCATGCCGGATGATGGCCAAGTGATTGTGATGGAAGGCAGTGTAGAGAATGGGAAGCAGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CCA 90 bp | GCATCCCACTGCCTCCTGTTCTCTGCGGCAATGACATCCTGCTTCTaGGCCACAGAGTTCTTCAAAGGCTCTGTCTGTATAGTCTTCATG | + |
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Preference number: 1 (lower is better) Translates to: ASHCLLFSAAMTSCF*ATEFFKGSVCIVFM Trigger: CATGAAGACTATACAGACAGAGCCTTTGAAGAACTCTGTGGCCCAGAAGCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR GCA 90 bp | TTTCTTGACTGGCAAGTTTGTCTTTTCTTTCTCTCCTGGCTCCTCTaGATTCTTAGAGGAGCTGGGAGCCTGTTCCGCTTCTTCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: FLDWQVCLFFLSWLL*ILRGAGSLFRFFCG Trigger: TCCACAGAAGAAGCGGAACAGGCTCCCAGCTCCTCTAAGAATGCAGAGGAGCCAGGAGAGAAAGAAAAGACAAACTTGCCAGTCAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
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| 3UTR CCA 90 bp | AGCCACACAGATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTaGAGTTTCTTGACTGGCAAGTTTGTCTTTTCTTTCTCTCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: SHTDQTGQNQRPDLH*SFLTGKFVFSFSPG Trigger: GCCAGGAGAGAAAGAAAAGACAAACTTGCCAGTCAAGAAACTCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
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| 3UTR TCA 90 bp | ATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGAGTTTCTTaGCTGGCAAGTTTGTCTTTTCTTTCTCTCCTGGCTCCTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: IKQAKTSVQTFTGVS*LASLSFLSLLAPLH Trigger: ATGCAGAGGAGCCAGGAGAGAAAGAAAAGACAAACTTGCCAGTCAAGAAACTCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
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| 3UTR CCA 90 bp | CTTGCCTTGTGTCCTAAAATGTGGTTGATTTTGCAGACAGGTTCATaGGCTACGGTTTCTCCTTTACTGGCAGACAATGAGCCACTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LALCPKMWLILQTGS*ATVSPLLADNEPLQ Trigger: CTGCAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCGTAGCCCATGAACCTGTCTGCAAAATCAACCACATTTTAGGACACAAGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR GCA 90 bp | AATCAGGCACAGTCAATCTTCCAAGAATCTTCCATAGGCCCATGGTaGTATAACCTCTGCTCTTACGAATGCTGGCATTGTGTCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: NQAQSIFQESSIGPW*YNLCSYECWHCVSQ Trigger: CTGTGAGACACAATGCCAGCATTCGTAAGAGCAGAGGTTATAGCACCATGGGCCTATGGAAGATTCTTGGAAGATTGACTGTGCCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CCA 90 bp | GACAATCAGGCACAGTCAATCTTCCAAGAATCTTCCATAGGCCCATaGTGCTATAACCTCTGCTCTTACGAATGCTGGCATTGTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: DNQAQSIFQESSIGP*CYNLCSYECWHCVS Trigger: TGAGACACAATGCCAGCATTCGTAAGAGCAGAGGTTATAGCACCATGGGCCTATGGAAGATTCTTGGAAGATTGACTGTGCCTGATTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CCA 90 bp | TCAAAGCTTAAAGTAGCATTTAGTTTATCCACTGCCTCATTCTCCTaGACGGTGTCTTCCTCTGAAATACACTTGTCTAGGCTGATTTCA | + |
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Preference number: 1 (lower is better) Translates to: SKLKVAFSLSTASFS*TVSSSEIHLSRLIS Trigger: TGAAATCAGCCTAGACAAGTGTATTTCAGAGGAAGACACCGTCCAGGAGAATGAGGCAGTGGATAAACTAAATGCTACTTTAAGCTTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 90 bp | CCAGTCTTTATTCCTCTGTGGTTAGATAATATGAAGGGTGTTATTTaGACTTCTTTTGCAAATTTGTCAAGACTTGCCTTGTGTCCTAAA | + |
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Preference number: 1 (lower is better) Translates to: PVFIPLWLDNMKGVI*TSFANLSRLALCPK Trigger: TTTAGGACACAAGGCAAGTCTTGACAAATTTGCAAAAGAAGTTCAAATAACACCCTTCATATTATCTAACCACAGAGGAATAAAGACTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTGCCTTCCATCACAATCACTTGGCCATCATCCGGCATGGTGGGGCAGGTGTGGTTCCACAGAAGATaGACGAAGACCCAATTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TLPSITITWPSSGMVGQVWFHRR*TKTQLS Trigger: AGACAATTGGGTCTTCGTCCATCTTCTGTGGAACCA...CACCTGCCCCACCATGCCGGATGATGGCCAAGTGATTGTGATGGAAGGCAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR CCA 90 bp | TCTACACTGCCTTCCATCACAATCACTTGGCCATCATCCGGCATGGTGGGGCAGCTTTTCTCCCTCGTTTaGATGTGGTTCCACAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: STLPSITITWPSSGMVGQLFSLV*MWFHRR Trigger: TCTTCTGTGGAACCACATCCAAACGAGGGAGAAAAG...CTGCCCCACCATGCCGGATGATGGCCAAGTGATTGTGATGGAAGGCAGTGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CAA 90 bp | GATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGAGTTTCTaGACTGGCAAGTTTGTCTTTTCTTTCTCTCCTGGCTCCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: DQTGQNQRPDLHWSF*TGKFVFSFSPGSSA Trigger: TGCAGAGGAGCCAGGAGAGAAAGAAAAGACAAACTTGCCAGTCAAGAAACTCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
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| 3UTR-3UTR CCA 90 bp | CTACACTGCCTTCCATCACAATCACTTGGCCATCATCCGGCATGGTGGGGCAGGTGTTTCCAATATTCCTaGTCCTTCATTTTGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LHCLPSQSLGHHPAWWGRCFQYS*SFILFF Trigger: GAAGAACAAAATGAAGGACCAGGAATATTGGAAACA...CCTGCCCCACCATGCCGGATGATGGCCAAGTGATTGTGATGGAAGGCAGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CAA 90 bp | TCCACTGCCTCATTCTCCTGGACGGTGTCTTCCTCTGAAATACACTaGTCTAGGCTGATTTCAAACTTTACCACTCTCTTCAGCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: STASFSWTVSSSEIH*SRLISNFTTLFSSL Trigger: GAGAGAGCTGAAGAGAGTGGTAAAGTTTGAAATCAGCCTAGACAAGTGTATTTCAGAGGAAGACACCGTCCAGGAGAATGAGGCAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTGTCTGTATAGTCTTCATGTTCCTCCTTACATCTGTGCTCCTGAAACTTTCCTTCATGTCGTTGTaGTACTGTTGGCGGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: GSVCIVFMFLLTSVLLKLSFMSL*YCWRIS Trigger: AGAAATCCGCCAACAGTACCACAACGACATGAAGGA...AAGTTTCAGGAGCACAGATGTAAGGAGGAACATGAAGACTATACAGACAGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR TCA 90 bp | GCGGATTTCTTCCAGCTGTTTCCAATATTCCTGGTCCTTCATTTTGTTCTTCCTTTAGTCTCCTCCCAATaGCTTTGTAGCTTTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: ADFFQLFPIFLVLHFVLPLVSSQ*LCSFSP Trigger: GGGAGAAAAGCTACAAAGTCATTGGGAGGAGACTAA...AGGAAGAACAAAATGAAGGACCAGGAATATTGGAAACAGCTGGAAGAAATCCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR CCA 90 bp | TTATTTTTCCAAGACAATCAGGCACAGTCAATCTTCCAAGAATCTTCCATAGGCTCGTTGTGGTACTGTTaGCGGATTTCTTCCAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LFFQDNQAQSIFQESSIGSLWYC*RISSSC Trigger: ACAGCTGGAAGAAATCCGCCAACAGTACCACAACGA...GCCTATGGAAGATTCTTGGAAGATTGACTGTGCCTGATTGTCTTGGAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR TCA 90 bp | CTTACGAATGCTGGCATTGTGTCTCACAGGTTTAGGTATGTCATGTTTCCATCTTTGTTCTTCCTGTATTaGAGCTCCTGGAATTTAGTC | + |
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Preference number: 2 (lower is better) Translates to: LTNAGIVSHRFRYVMFPSLFFLY*SSWNLV Trigger: GACTAAATTCCAGGAGCTTCAATACAGGAAGAACAA...AGATGGAAACATGACATACCTAAACCTGTGAGACACAATGCCAGCATTCGTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTCACAGGTTTAGGTATGTCATGTTTCCATCTTCATTCAGTACTAGGACTTCCCATTCTCTACACTaGCTTCCATCACAATCACTT | + |
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Preference number: 2 (lower is better) Translates to: VSHRFRYVMFPSSFSTRTSHSLH*LPSQSL Trigger: AAGTGATTGTGATGGAAGGCAGTGTAGAGAATGGGA...AGTCCTAGTACTGAATGAAGATGGAAACATGACATACCTAAACCTGTGAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTTTTCCAAGACAATCAGGCACAGTCAATCTTCCAAGAATCTTCCATAGGCGTCCTAAAATGTGGTTaGTTTTGCAGACAGGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LFFQDNQAQSIFQESSIGVLKCG*FCRQVH Trigger: ATGAACCTGTCTGCAAAATCAACCACATTTTAGGAC...GCCTATGGAAGATTCTTGGAAGATTGACTGTGCCTGATTGTCTTGGAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR GCA 72 bp | CGGCATGGTGGGGCAGGTGGAGGTGACATCTGCCATTaGCATTATTCGCAGCAGAGTGTGAGGTGCCCCGGC | + |
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Preference number: 3 (lower is better) Translates to: RHGGAGGGDICH*HYSQQSVRCPG Trigger: GCCGGGGCACCTCACACTCTGCTGCGAATAATGGCAATGGCAGATGTCACCTCCACCTGCCCCACCATGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CCA 72 bp | GCAGGCACACTCTGCTGCCAAAGCACACGGGGTCCCTaGCACATCCAGCCACCACTGCTTCCCATTCTCTAC | + |
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Preference number: 3 (lower is better) Translates to: AGTLCCQSTRGP*HIQPPLLPILY Trigger: GTAGAGAATGGGAAGCAGTGGTGGCTGGATGTGCCAGGGACCCCGTGTGCTTTGGCAGCAGAGTGTGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 72 bp | CCCCGGCATCCCACTGCCTCCTGTTCTCTGCGGCAATaGCATCCTGCTTCTGGGCCACAGAGTTCTTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: PRHPTASCSLRQ*HPASGPQSSSK Trigger: CTTTGAAGAACTCTGTGGCCCAGAAGCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGATGCCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 72 bp | GTGACATCTGCCATTGCCATTATTCGCAGCAGAGTGTaGGGTGCCCCGGCATCCCACTGCCTCCTGTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: VTSAIAIIRSRV*GAPASHCLLFS Trigger: AGAGAACAGGAGGCAGTGGGATGCCGGGGCACCTCACACTCTGCTGCGAATAATGGCAATGGCAGATGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 72 bp | CTTGGCCATCATCCGGCATGGTGGGGCAGGTGGAGGTaGCATCTGCCATTGCCATTATTCGCAGCAGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: LGHHPAWWGRWR*HLPLPLFAAEC Trigger: ACACTCTGCTGCGAATAATGGCAATGGCAGATGTCACCTCCACCTGCCCCACCATGCCGGATGATGGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR GCA 72 bp | ATCATCCGGCATGGTGGGGCAGGTGGAGGTGACATCTaGCATTGCCATTATTCGCAGCAGAGTGTGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: IIRHGGAGGGDI*HCHYSQQSVRC Trigger: GCACCTCACACTCTGCTGCGAATAATGGCAATGGCAGATGTCACCTCCACCTGCCCCACCATGCCGGATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR GCA 72 bp | TCCCACTGCCTCCTGTTCTCTGCGGCAATGACATCCTaGTTCTGGGCCACAGAGTTCTTCAAAGGCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SHCLLFSAAMTS*FWATEFFKGSV Trigger: GACAGAGCCTTTGAAGAACTCTGTGGCCCAGAAGCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CCA 72 bp | TGCAGACAGGTTCATGGGCTACGGTTTCTCCTTTACTaGCAGACAATGAGCCACTGCAGGCACACTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: CRQVHGLRFLLY*QTMSHCRHTLL Trigger: CAGCAGAGTGTGCCTGCAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCGTAGCCCATGAACCTGTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 72 bp | TTCATGGGCTACGGTTTCTCCTTTACTGGCAGACAATaGGCCACTGCAGGCACACTCTGCTGCCAAAGCACA | + |
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Preference number: 3 (lower is better) Translates to: FMGYGFSFTGRQ*ATAGTLCCQST Trigger: TGTGCTTTGGCAGCAGAGTGTGCCTGCAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCGTAGCCCATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CCA 72 bp | TGCCTCCTGTTCTCTGCGGCAATGACATCCTGCTTCTaGGCCACAGAGTTCTTCAAAGGCTCTGTCTGTATA | + |
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Preference number: 3 (lower is better) Translates to: CLLFSAAMTSCF*ATEFFKGSVCI Trigger: TATACAGACAGAGCCTTTGAAGAACTCTGTGGCCCAGAAGCAGGATGTCATTGCCGCAGAGAACAGGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR CAA 90 bp | ACACTGCCTTCCATCACAATCACTTGGCCATCATCCGGCATGGTGGGGCAGGTGTTTGTTCTTCCTGTATaGAAGCTCCTGGAATTTAGT | + |
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Preference number: 3 (lower is better) Translates to: TLPSITITWPSSGMVGQVFVLPV*KLLEFS Trigger: ACTAAATTCCAGGAGCTTCAATACAGGAAGAACAAA...CACCTGCCCCACCATGCCGGATGATGGCCAAGTGATTGTGATGGAAGGCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 72 bp | GCCAAAACCAGCGTCCAGACCTTCACTGGAGTTTCTTaGCTGGCAAGTTTGTCTTTTCTTTCTCTCCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: AKTSVQTFTGVS*LASLSFLSLLA Trigger: AGCCAGGAGAGAAAGAAAAGACAAACTTGCCAGTCAAGAAACTCCAGTGAAGGTCTGGACGCTGGTTTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
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| 3UTR CCA 72 bp | AAACCAGCGTCCAGACCTTCACTGGAGTTTCTTGACTaGCAAGTTTGTCTTTTCTTTCTCTCCTGGCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: KPASRPSLEFLD*QVCLFFLSWLL Trigger: GAGGAGCCAGGAGAGAAAGAAAAGACAAACTTGCCAGTCAAGAAACTCCAGTGAAGGTCTGGACGCTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
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| 3UTR CCA 72 bp | AGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATaGGGAACAGAAGATTGTTCACACTTGCACGTCATG | + |
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Preference number: 3 (lower is better) Translates to: SGFFFKDMDPHA*GTEDCSHLHVM Trigger: CATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTCACAGGTTTAGGTATGTCATGTTTCCATCTTCATTCAGTACTAGGACTGCTTTTCTCCCTCGTTaGGATGTGGTTCCACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: VSHRFRYVMFPSSFSTRTAFLPR*DVVPQK Trigger: CTTCTGTGGAACCACATCCAAACGAGGGAGAAAAGC...AGTCCTAGTACTGAATGAAGATGGAAACATGACATACCTAAACCTGTGAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGTTTGCTCTTATTTTTCCAAGACAATCAGGCACAGTCAATCTTCCAAGAGTCGTTGTGGTACTGTaGGCGGATTTCTTCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: VLFALIFPRQSGTVNLPRVVVVL*ADFFQL Trigger: CAGCTGGAAGAAATCCGCCAACAGTACCACAACGAC...TCTTGGAAGATTGACTGTGCCTGATTGTCTTGGAAAAATAAGAGCAAACAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTCCTGGACGGTGTCTTCCTCTGAAATACACTTGTCTAGGCTGATTTCAAACATTTCCTTCATGTCGTaGTGGTACTGTTGGCGGATT | + |
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Preference number: 3 (lower is better) Translates to: FSWTVSSSEIHLSRLISNISFMS*WYCWRI Trigger: AATCCGCCAACAGTACCACAACGACATGAAGGAAAT...GTTTGAAATCAGCCTAGACAAGTGTATTTCAGAGGAAGACACCGTCCAGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR CCA 72 bp | TGTCCTAAAATGTGGTTGATTTTGCAGACAGGTTCATaGGCTACGGTTTCTCCTTTACTGGCAGACAATGAG | + |
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Preference number: 3 (lower is better) Translates to: CPKMWLILQTGS*ATVSPLLADNE Trigger: CTCATTGTCTGCCAGTAAAGGAGAAACCGTAGCCCATGAACCTGTCTGCAAAATCAACCACATTTTAGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| 3UTR TCA 72 bp | ATTTGTCAAGACTTGCCTTGTGTCCTAAAATGTGGTTaGTTTTGCAGACAGGTTCATGGGCTACGGTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ICQDLPCVLKCG*FCRQVHGLRFL Trigger: GAGAAACCGTAGCCCATGAACCTGTCTGCAAAATCAACCACATTTTAGGACACAAGGCAAGTCTTGACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| 3UTR CCA 72 bp | GCAAATTTGTCAAGACTTGCCTTGTGTCCTAAAATGTaGTTGATTTTGCAGACAGGTTCATGGGCTACGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ANLSRLALCPKM*LILQTGSWATV Trigger: AACCGTAGCCCATGAACCTGTCTGCAAAATCAACCACATTTTAGGACACAAGGCAAGTCTTGACAAATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTCAGTTGTATGTCCTTTTACTTCCATGAGTTTGTGTAACTTTCTGTCGTTTTTCCATCACAATCACTaGGCCATCATCCGGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: HSVVCPFTSMSLCNFLSFFHHNH*AIIRHG Trigger: ACCATGCCGGATGATGGCCAAGTGATTGTGATGGAA...AAACGACAGAAAGTTACACAAACTCATGGAAGTAAAAGGACATACAACTGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTCGTCATGACTGGCATTaGATGAACCTTGGTCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: KRFSLIDGMKAKISIHQSRHDWH*MNLGLS Trigger: GCTAAGACCAAGGTTCATCAAATGCCAGTCATGACG...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| 3UTR CCA 72 bp | TTCTTTTTAATTTCCTTCATGTCGTTGTGGTACTGTTaGCGGATTTCTTCCAGCTGTTTCCAATATTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FFLISFMSLWYC*RISSSCFQYSW Trigger: CCAGGAATATTGGAAACAGCTGGAAGAAATCCGCCAACAGTACCACAACGACATGAAGGAAATTAAAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR TCA 90 bp | CTACACTGCCTTCCATCACAATCACTTGGCCATCATCCGGCATGGTGGGGCAGGGCGGGCGTTAAGCAGTaGGCATGGAAGAATCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHCLPSQSLGHHPAWWGRAGVKQ*AWKNRC Trigger: GCACCGATTCTTCCATGCTCACTGCTTAACGCCCGC...CCTGCCCCACCATGCCGGATGATGGCCAAGTGATTGTGATGGAAGGCAGTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGAGCAGGCACACTCTGCTaGCAAAGCACACGGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLATQIKQAKTSVQTFTGAGTLC*QSTRGP Trigger: GGGACCCCGTGTGCTTTGGCAGCAGAGTGTGCCTGC...TCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGAGAGTTGGGGCAGGATaGCATGCAGCCTGGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWRVGAG*HAAWTG Trigger: GCCAGTCCAGGCTGCATGGCATCCTGCCCCAACTCT...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR GCA 90 bp | ATGGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGCAGGCACACTCTGCTaGCAAAGCACACGGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MDPHAWGTEDCSHLHVMTAGTLC*QSTRGP Trigger: GGGACCCCGTGTGCTTTGGCAGCAGAGTGTGCCTGC...AGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | TCTACACTGCCTTCCATCACAATCACTTGGCCATCATCCGGCATGGTGGGGCAGAAGCTGTGGGGCCAATaGCCATGTTCTCCATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: STLPSITITWPSSGMVGQKLWGQ*PCSPCE Trigger: CTCACATGGAGAACATGGCCATTGGCCCCACAGCTT...CTGCCCCACCATGCCGGATGATGGCCAAGTGATTGTGATGGAAGGCAGTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR TCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGCCTGAGGAGACACTCTaGAGAGCTGAGGTATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWPEETL*RAEVSR Trigger: CCTTGATACCTCAGCTCTTCAGAGTGTCTCCTCAGG...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGAAGCTGTGGGGCCAATaGCCATGTTCTCCATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWKLWGQ*PCSPCE Trigger: CTCACATGGAGAACATGGCCATTGGCCCCACAGCTT...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTCCTCTGCATTCTTAGAGGAGCTGGGAGCCTGTTCCGCTTCTTCTGTGGAGTAGGCAGCAGACCATaGACTAACTCTCCAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLLCILRGAGSLFRFFCGVGSRP*TNSPTS Trigger: GCTTGTTGGAGAGTTAGTCCATGGTCTGCTGCCTAC...TCCACAGAAGAAGCGGAACAGGCTCCCAGCTCCTCTAAGAATGCAGAGGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGATTGTATGGCCTGTTCTaGCAGATCTCTGGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLATQIKQAKTSVQTFTGLYGLF*QISGDR Trigger: CCTGTCCCCAGAGATCTGTCAGAACAGGCCATACAA...TCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCACTGCCTCCTGTTCTCTGCGGCAATGACATCCTGCTTCTGGGCCACAGAACAAGGATCGGGCAATaGGAGTTTCTAAAAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPLPPVLCGNDILLLGHRTRIGQ*EFLKRV Trigger: GACCCTTTTTAGAAACTCTCATTGCCCGATCCTTGT...TCTGTGGCCCAGAAGCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGCTGAAAGAAACCCTCTaGTTCTGGGCCACAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWLKETL*FWATEF Trigger: GAACTCTGTGGCCCAGAAGCAGAGGGTTTCTTTCAG...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | TCTACACTGCCTTCCATCACAATCACTTGGCCATCATCCGGCATGGTGGGGCAGGTTCTGACAGATCTCTaGGGACAGGTAGTAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: STLPSITITWPSSGMVGQVLTDL*GQVVRC Trigger: ACACCTTACTACCTGTCCCCAGAGATCTGTCAGAAC...CTGCCCCACCATGCCGGATGATGGCCAAGTGATTGTGATGGAAGGCAGTGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTTTTACTGGCAGACAATaGGCCACTGCAGGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: MDPHAWGTEDCSHLHVMTFTGRQ*ATAGTL Trigger: GAGTGTGCCTGCAGTGGCTCATTGTCTGCCAGTAAA...AGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGGGTGACATCTGCCATTaGCATTATTCGCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWGDICH*HYSQQS Trigger: ACTCTGCTGCGAATAATGGCAATGGCAGATGTCACC...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGAAGAAGTGGGGTGATATaGGAGCAACACGTCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLATQIKQAKTSVQTFTGRSGVI*EQHVLD Trigger: GTCAAGGACGTGTTGCTCCCATATCACCCCACTTCT...TCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGTCGTTGTGGTACTGTTaGCGGATTTCTTCCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWSLWYC*RISSSC Trigger: ACAGCTGGAAGAAATCCGCCAACAGTACCACAACGA...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTAGCCTGCCGTTCTCTTaGAACGAGCTGAAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MDPHAWGTEDCSHLHVMTSLPFS*NELKKV Trigger: AACCTTCTTCAGCTCGTTTCAAGAGAACGGCAGGCT...AGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGGGACTGGATTCTTCTTaGACAGACCTCAGGATACAA | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWGLDSS*TDLRIQ Trigger: TTGTATCCTGAGGTCTGTTCAAGAAGAATCCAGTCC...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGTTAGTCTCCTCCCAATaGCTTTGTAGCTTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWLVSSQ*LCSFSP Trigger: GGGAGAAAAGCTACAAAGTCATTGGGAGGAGACTAA...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGAGTCATTCAGTGTTCTTaGTGTTCCAAAGTCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLATQIKQAKTSVQTFTGVIQCS*CSKVPE Trigger: CTCGGGGACTTTGGAACAGCAAGAACACTGAATGAC...TCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR GCA 90 bp | CATTTGATGAACCTTGGTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTCAGACAATGAGCCACTaGAGGCACACTCTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLMNLGLSHTDQTGQNQRQTMSH*RHTLLP Trigger: TGGCAGCAGAGTGTGCCTGCAGTGGCTCATTGTCTG...ACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGACCAAGGTTCATCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGTCCTTCATGTCGTTGTaGTACTGTTGGCGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWSFMSL*YCWRIS Trigger: AGAAATCCGCCAACAGTACCACAACGACATGAAGGA...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| 3UTR CAA 72 bp | GGCCAAAACCAGCGTCCAGACCTTCACTGGAGTTTCTaGACTGGCAAGTTTGTCTTTTCTTTCTCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQNQRPDLHWSF*TGKFVFSFSPG Trigger: GCCAGGAGAGAAAGAAAAGACAAACTTGCCAGTCAAGAAACTCCAGTGAAGGTCTGGACGCTGGTTTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCTCTGCATTCTTAGAGGAGCTGGGAGCCTGTTCCGCTTCTTCTGTGGAAATCACTTCGTTCTTTaGGGCCTCTTTTTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLLCILRGAGSLFRFFCGNHFVL*GLFFLC Trigger: ACAAAGGAAAAAGAGGCCTCAAAGAACGAAGTGATT...TCCACAGAAGAAGCGGAACAGGCTCCCAGCTCCTCTAAGAATGCAGAGGAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR TCA 90 bp | CATTTGATGAACCTTGGTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTTTGTATGGCCTGTTCTaGCAGATCTCTGGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLMNLGLSHTDQTGQNQRLYGLF*QISGDR Trigger: CCTGTCCCCAGAGATCTGTCAGAACAGGCCATACAA...ACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGACCAAGGTTCATCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGAACAAGGATCGGGCAATaGGAGTTTCTAAAAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLATQIKQAKTSVQTFTGTRIGQ*EFLKRV Trigger: GACCCTTTTTAGAAACTCTCATTGCCCGATCCTTGT...TCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGTTTACTGGCAGACAATaGGCCACTGCAGGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: EISKTADFSLRTWIPTHGFTGRQ*ATAGTL Trigger: GAGTGTGCCTGCAGTGGCTCATTGTCTGCCAGTAAA...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGACTTTTCTCCCTCGTTTaGATGTGGTTCCACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLATQIKQAKTSVQTFTGLFSLV*MWFHRR Trigger: TCTTCTGTGGAACCACATCCAAACGAGGGAGAAAAG...TCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGGACACTCTGAAGAGCTaGGGTATCAAGGACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EISKTADFSLRTWIPTHGDTLKS*GIKDCR Trigger: CCTACAGTCCTTGATACCTCAGCTCTTCAGAGTGTC...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGTACACTTGTCTAGGCTaGTTTCAAACTTTACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWYTCLG*FQTLPL Trigger: GAGTGGTAAAGTTTGAAATCAGCCTAGACAAGTGTA...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR GCA 90 bp | CATTTGATGAACCTTGGTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTGGTGGAGGTGACATCTaGCATTGCCATTATTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLMNLGLSHTDQTGQNQRGGGDI*HCHYSQ Trigger: CTGCGAATAATGGCAATGGCAGATGTCACCTCCACC...ACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGACCAAGGTTCATCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATCAGACAATGAGCCACTaGAGGCACACTCTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CEISKTADFSLRTWIPTHQTMSH*RHTLLP Trigger: TGGCAGCAGAGTGTGCCTGCAGTGGCTCATTGTCTG...ATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGAGAAGTGGGGTGATATaGGAGCAACACGTCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EISKTADFSLRTWIPTHGRSGVI*EQHVLD Trigger: GTCAAGGACGTGTTGCTCCCATATCACCCCACTTCT...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGGGAGCAACACGTCCTTaGCAAATCTTCAGAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EISKTADFSLRTWIPTHGGATRP*QIFRTR Trigger: TCTGGTTCTGAAGATTTGTCAAGGACGTGTTGCTCC...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGGACACTCTGAAGAGCTaGGGTATCAAGGACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCEISKTADFSLRTWIPTDTLKS*GIKDCR Trigger: CCTACAGTCCTTGATACCTCAGCTCTTCAGAGTGTC...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | GCGGATTTCTTCCAGCTGTTTCCAATATTCCTGGTCCTTCATTTTGTTCTTCCTCCTGAGGAGACACTCTaGAGAGCTGAGGTATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADFFQLFPIFLVLHFVLPPEETL*RAEVSR Trigger: CCTTGATACCTCAGCTCTTCAGAGTGTCTCCTCAGG...AGGAAGAACAAAATGAAGGACCAGGAATATTGGAAACAGCTGGAAGAAATCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCACTGGAGTTTCTTGACTGGCAAGTTTGTCTTTTCTTTCTCTCCTGGCTCTGTTCTCTGCGGCAATaGCATCCTGAAAGAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLEFLDWQVCLFFLSWLCSLRQ*HPERNP Trigger: AGGGTTTCTTTCAGGATGTCATTGCCGCAGAGAACA...GAGCCAGGAGAGAAAGAAAAGACAAACTTGCCAGTCAAGAAACTCCAGTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATTGCCTCTGGATCCTCTaGATGAGATCCCCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CEISKTADFSLRTWIPTHCLWIL*MRSPPS Trigger: TGATGGAGGGGATCTCATGCAGAGGATCCAGAGGCA...ATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR GCA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGGTCATTCAGTGTTCTTaGTGTTCCAAAGTCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EISKTADFSLRTWIPTHGVIQCS*CSKVPE Trigger: CTCGGGGACTTTGGAACAGCAAGAACACTGAATGAC...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | CATTTGATGAACCTTGGTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTGTTCTGACAGATCTCTaGGGACAGGTAGTAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLMNLGLSHTDQTGQNQRVLTDL*GQVVRC Trigger: ACACCTTACTACCTGTCCCCAGAGATCTGTCAGAAC...ACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGACCAAGGTTCATCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGGAAACCCTCTGCTTCTaGGCCACAGAGTTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EISKTADFSLRTWIPTHGETLCF*ATEFFK Trigger: TTTGAAGAACTCTGTGGCCCAGAAGCAGAGGGTTTC...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCGGTTTCTCCTTTACTaGCAGACAATGAGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCEISKTADFSLRTWIPTRFLLY*QTMSHC Trigger: GCAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCG...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTGGTTCTTTAGGAAGCTGTaGTTTGATCATTACGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPRMGNRRLFTLARHDWFFRKL*FDHYGF Trigger: GAAACCGTAATGATCAAACCACAGCTTCCTAAAGAA...CCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATATCCCCCTGCCTTCCTaGATGTCATCTTCATCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: CEISKTADFSLRTWIPTHIPLPS*MSSSSD Trigger: ATCGGATGAAGATGACATGCAGGAAGGCAGGGGGAT...ATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGTAGGCAGCAGACCATaGACTAACTCTCCAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CEISKTADFSLRTWIPTHVGSRP*TNSPTS Trigger: GCTTGTTGGAGAGTTAGTCCATGGTCTGCTGCCTAC...ATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGTGGTTCCACAGAAGATaGACGAAGACCCAATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EISKTADFSLRTWIPTHGWFHRR*TKTQLS Trigger: AGACAATTGGGTCTTCGTCCATCTTCTGTGGAACCA...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGGAAACCCTCTGCTTCTaGGCCACAGAGTTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCEISKTADFSLRTWIPTETLCF*ATEFFK Trigger: TTTGAAGAACTCTGTGGCCCAGAAGCAGAGGGTTTC...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGAATTTCTACCTTTTCCTaGTCTTCTTTAGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLATQIKQAKTSVQTFTGISTFS*SSLGSC Trigger: ACAGCTTCCTAAAGAAGACCAGGAAAAGGTAGAAAT...TCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGCCTTTGCAGGGGTGGTaGGGTGACAGAGTTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKRFSLIDGMKAKISIHQPLQGW*GDRVGA Trigger: TGCCCCAACTCTGTCACCCCACCACCCCTGCAAAGG...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTAAAATCTTCCTGTCATaGATATGCTTCAGTCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MDPHAWGTEDCSHLHVMTKIFLS*ICFSPR Trigger: TCTAGGACTGAAGCATATTCATGACAGGAAGATTTT...AGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTTTAATTTCCTTCATGTCGTTGTGGTACTGTTGGCGGATTTCTTCCAGTTGTATGGCCTGTTCTaGCAGATCTCTGGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLFNFLHVVVVLLADFFQLYGLF*QISGDR Trigger: CCTGTCCCCAGAGATCTGTCAGAACAGGCCATACAA...CTGGAAGAAATCCGCCAACAGTACCACAACGACATGAAGGAAATTAAAAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCTTCCTCTGAAATACACTTGTCTAGGCTGATTTCAAACTTTACCACTCTCGACACTCTGAAGAGCTaGGGTATCAAGGACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSSEIHLSRLISNFTTLDTLKS*GIKDCR Trigger: CCTACAGTCCTTGATACCTCAGCTCTTCAGAGTGTC...GAGAGTGGTAAAGTTTGAAATCAGCCTAGACAAGTGTATTTCAGAGGAAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGACAAGGATCGGGCAATaGGAGTTTCTAAAAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCEISKTADFSLRTWIPTTRIGQ*EFLKRV Trigger: GACCCTTTTTAGAAACTCTCATTGCCCGATCCTTGT...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGTTAGTCTCCTCCCAATaGCTTTGTAGCTTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCEISKTADFSLRTWIPTLVSSQ*LCSFSP Trigger: GGGAGAAAAGCTACAAAGTCATTGGGAGGAGACTAA...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR GCA 90 bp | CATTTGATGAACCTTGGTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTTCCCATTCTCTACACTaGCTTCCATCACAATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HLMNLGLSHTDQTGQNQRSHSLH*LPSQSL Trigger: AAGTGATTGTGATGGAAGGCAGTGTAGAGAATGGGA...ACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGACCAAGGTTCATCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGTTCTTCAAAGGCTCTGTCTGTATAGTCTTCATGTTCCTCCTTACATCTAGAAGTGGGGTGATATaGGAGCAACACGTCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TEFFKGSVCIVFMFLLTSRSGVI*EQHVLD Trigger: GTCAAGGACGTGTTGCTCCCATATCACCCCACTTCT...AGATGTAAGGAGGAACATGAAGACTATACAGACAGAGCCTTTGAAGAACTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR CCA 90 bp | ATGGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTATTTCTACCTTTTCCTaGTCTTCTTTAGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MDPHAWGTEDCSHLHVMTISTFS*SSLGSC Trigger: ACAGCTTCCTAAAGAAGACCAGGAAAAGGTAGAAAT...AGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | CTTCATTTTGTTCTTCCTGTATTGAAGCTCCTGGAATTTAGTCTCCTCCCAATGGGAGCAACACGTCCTTaGCAAATCTTCAGAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHFVLPVLKLLEFSLLPMGATRP*QIFRTR Trigger: TCTGGTTCTGAAGATTTGTCAAGGACGTGTTGCTCC...CATTGGGAGGAGACTAAATTCCAGGAGCTTCAATACAGGAAGAACAAAATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR GCA 90 bp | CACTCAGTTGTATGTCCTTTTACTTCCATGAGTTTGTGTAACTTTCTGTCGTTTTGCCTCTGGATCCTCTaGATGAGATCCCCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HSVVCPFTSMSLCNFLSFCLWIL*MRSPPS Trigger: TGATGGAGGGGATCTCATGCAGAGGATCCAGAGGCA...AAACGACAGAAAGTTACACAAACTCATGGAAGTAAAAGGACATACAACTGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR CCA 90 bp | ATGGATCCCCACGCATGGGGAACAGAAGATTGTTCACACTTGCACGTCATGACTTGTTTCCAATATTCCTaGTCCTTCATTTTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MDPHAWGTEDCSHLHVMTCFQYS*SFILFF Trigger: GAAGAACAAAATGAAGGACCAGGAATATTGGAAACA...AGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGGGATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGTTTCCTTTGCAGGGGTaGTGGGGTGACAGAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKRFSLIDGMKAKISIHQFPLQG*WGDRVG Trigger: CCCAACTCTGTCACCCCACCACCCCTGCAAAGGAAA...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| 3UTR CAA 72 bp | TCATTCTCCTGGACGGTGTCTTCCTCTGAAATACACTaGTCTAGGCTGATTTCAAACTTTACCACTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFSWTVSSSEIH*SRLISNFTTLF Trigger: GAAGAGAGTGGTAAAGTTTGAAATCAGCCTAGACAAGTGTATTTCAGAGGAAGACACCGTCCAGGAGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR TCA 90 bp | CATTTGATGAACCTTGGTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTACAGTGACTGCTTTCTaGTTTATCTTTAGCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLMNLGLSHTDQTGQNQRTVTAF*FIFSQV Trigger: TACTTGGCTAAAGATAAATCAGAAAGCAGTCACTGT...ACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGACCAAGGTTCATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGAAAATCTTCCTGTCATaGATATGCTTCAGTCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EISKTADFSLRTWIPTHGKIFLS*ICFSPR Trigger: TCTAGGACTGAAGCATATTCATGACAGGAAGATTTT...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGCCTGAGGAGACACTCTaGAGAGCTGAGGTATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKRFSLIDGMKAKISIHQPEETL*RAEVSR Trigger: CCTTGATACCTCAGCTCTTCAGAGTGTCTCCTCAGG...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGTACACTTGTCTAGGCTaGTTTCAAACTTTACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VCEISKTADFSLRTWIPTYTCLG*FQTLPL Trigger: GAGTGGTAAAGTTTGAAATCAGCCTAGACAAGTGTA...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS-3UTR GCA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTTGCCTCTGGATCCTCTaGATGAGATCCCCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KRFSLIDGMKAKISIHQSCLWIL*MRSPPS Trigger: TGATGGAGGGGATCTCATGCAGAGGATCCAGAGGCA...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGTTCAGAACCAGATGGTaGAAGTTGTTGCTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCEISKTADFSLRTWIPTFRTRW*KLLLSK Trigger: TTTTGAGAGCAACAACTTCCACCATCTGGTTCTGAA...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS-3UTR CCA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTAAGCTGTGGGGCCAATaGCCATGTTCTCCATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRFSLIDGMKAKISIHQSKLWGQ*PCSPCE Trigger: CTCACATGGAGAACATGGCCATTGGCCCCACAGCTT...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| 3UTR CAA 72 bp | CCAATATTCCTGGTCCTTCATTTTGTTCTTCCTGTATaGAAGCTCCTGGAATTTAGTCTCCTCCCAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: PIFLVLHFVLPV*KLLEFSLLPMT Trigger: AGTCATTGGGAGGAGACTAAATTCCAGGAGCTTCAATACAGGAAGAACAAAATGAAGGACCAGGAATATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
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| CDS-3UTR TCA 90 bp | GGCTCTGTCTGTATAGTCTTCATGTTCCTCCTTACATCTGTGCTCCTGAAACTTAAAATCTTCCTGTCATaGATATGCTTCAGTCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSVCIVFMFLLTSVLLKLKIFLS*ICFSPR Trigger: TCTAGGACTGAAGCATATTCATGACAGGAAGATTTT...AAGTTTCAGGAGCACAGATGTAAGGAGGAACATGAAGACTATACAGACAGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR GCA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTCTGAAAGAAACCCTCTaGTTCTGGGCCACAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRFSLIDGMKAKISIHQSLKETL*FWATEF Trigger: GAACTCTGTGGCCCAGAAGCAGAGGGTTTCTTTCAG...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR GCA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCGGTGGAGGTGACATCTaGCATTGCCATTATTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTHGNKNKAFQFDRWNESGGGDI*HCHYSQ Trigger: CTGCGAATAATGGCAATGGCAGATGTCACCTCCACC...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTCGGTTTCTCCTTTACTaGCAGACAATGAGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRFSLIDGMKAKISIHQSRFLLY*QTMSHC Trigger: GCAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCG...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGTTCTTTAGGAAGCTGTaGTTTGATCATTACGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCEISKTADFSLRTWIPTFFRKL*FDHYGF Trigger: GAAACCGTAATGATCAAACCACAGCTTCCTAAAGAA...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATACAGTGACTGCTTTCTaGTTTATCTTTAGCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CEISKTADFSLRTWIPTHTVTAF*FIFSQV Trigger: TACTTGGCTAAAGATAAATCAGAAAGCAGTCACTGT...ATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGGGAGCAACACGTCCTTaGCAAATCTTCAGAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKRFSLIDGMKAKISIHQGATRP*QIFRTR Trigger: TCTGGTTCTGAAGATTTGTCAAGGACGTGTTGCTCC...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTTGTTCTCTGCGGCAATaGCATCCTGAAAGAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRFSLIDGMKAKISIHQSCSLRQ*HPERNP Trigger: AGGGTTTCTTTCAGGATGTCATTGCCGCAGAGAACA...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR GCA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCGGTGACATCTGCCATTaGCATTATTCGCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTHGNKNKAFQFDRWNESGDICH*HYSQQS Trigger: ACTCTGCTGCGAATAATGGCAATGGCAGATGTCACC...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCGTTCTGACAGATCTCTaGGGACAGGTAGTAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTHGNKNKAFQFDRWNESVLTDL*GQVVRC Trigger: ACACCTTACTACCTGTCCCCAGAGATCTGTCAGAAC...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGTCGTTGTGGTACTGTTaGCGGATTTCTTCCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKRFSLIDGMKAKISIHQSLWYC*RISSSC Trigger: ACAGCTGGAAGAAATCCGCCAACAGTACCACAACGA...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTGGACTGGATTCTTCTTaGACAGACCTCAGGATACAA | + |
|
Preference number: 4 (lower is better) Translates to: KRFSLIDGMKAKISIHQSGLDSS*TDLRIQ Trigger: TTGTATCCTGAGGTCTGTTCAAGAAGAATCCAGTCC...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCCTTTTCTCCCTCGTTTaGATGTGGTTCCACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTHGNKNKAFQFDRWNESLFSLV*MWFHRR Trigger: TCTTCTGTGGAACCACATCCAAACGAGGGAGAAAAG...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATTGTTTCCAATATTCCTaGTCCTTCATTTTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CEISKTADFSLRTWIPTHCFQYS*SFILFF Trigger: GAAGAACAAAATGAAGGACCAGGAATATTGGAAACA...ATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTTCCTTCATGTCGTTGTaGTACTGTTGGCGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRFSLIDGMKAKISIHQSSFMSL*YCWRIS Trigger: AGAAATCCGCCAACAGTACCACAACGACATGAAGGA...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| 3UTR CAA 72 bp | TTCCACTCAGTTGTATGTCCTTTTACTTCCATGAGTTaGTGTAACTTTCTGTCGTTTCTCTCACTGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FHSVVCPFTSMS*CNFLSFLSLLM Trigger: CATCAACAGTGAGAGAAACGACAGAAAGTTACACAAACTCATGGAAGTAAAAGGACATACAACTGAGTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGTCCCATTCTCTACACTaGCTTCCATCACAATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TKRFSLIDGMKAKISIHQSHSLH*LPSQSL Trigger: AAGTGATTGTGATGGAAGGCAGTGTAGAGAATGGGA...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCAATCACTTCGTTCTTTaGGGCCTCTTTTTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTHGNKNKAFQFDRWNESNHFVL*GLFFLC Trigger: ACAAAGGAAAAAGAGGCCTCAAAGAACGAAGTGATT...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGTTGTTCTTCCTGTATTaGAGCTCCTGGAATTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRFSLIDGMKAKISIHQLFFLY*SSWNLV Trigger: GACTAAATTCCAGGAGCTTCAATACAGGAAGAACAA...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR TCA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTTTGTTCTTCCTGTATTaGAGCTCCTGGAATTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRFSLIDGMKAKISIHQSLFFLY*SSWNLV Trigger: GACTAAATTCCAGGAGCTTCAATACAGGAAGAACAA...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGTTCAGAACCAGATGGTaGAAGTTGTTGCTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKRFSLIDGMKAKISIHQFRTRW*KLLLSK Trigger: TTTTGAGAGCAACAACTTCCACCATCTGGTTCTGAA...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | GACAATGAGCCACTGCAGGCACACTCTGCTGCCAAAGCACACGGGGTCCCTGGCGGGAGCAACACGTCCTaGACAAATCTTCAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: DNEPLQAHSAAKAHGVPGGSNTS*TNLQNQ Trigger: CTGGTTCTGAAGATTTGTCAAGGACGTGTTGCTCCC...GCCAGGGACCCCGTGTGCTTTGGCAGCAGAGTGTGCCTGCAGTGGCTCATTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS TCA 90 bp | GCCCCGGCATCCCACTGCCTCCTGTTCTCTGCGGCAATGACATCCTaGAAGAAACCCTCTGCTTCTGGGCCACAGAGTTCTTCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: APASHCLLFSAAMTS*KKPSASGPQSSSKA Trigger: AGCCTTTGAAGAACTCTGTGGCCCAGAAGCAGAGGGTTTCTTTCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGATGCCGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS TCA 90 bp | TGTGAGGTGCCCCGGCATCCCACTGCCTCCTGTTCTCTGCGGCAATaGCATCCTGAAAGAAACCCTCTGCTTCTGGGCCACAGAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CEVPRHPTASCSLRQ*HPERNPLLLGHRVL Trigger: AAGAACTCTGTGGCCCAGAAGCAGAGGGTTTCTTTCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGATGCCGGGGCACCTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS TCA 90 bp | AAGCTGTGGTTTGATCATTACGGTTTCTCCTTTACTGGCAGACAATaGGCCACTGCAGGCACACTCTGCTGCCAAAGCACACGGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLWFDHYGFSFTGRQ*ATAGTLCCQSTRGP Trigger: GGGACCCCGTGTGCTTTGGCAGCAGAGTGTGCCTGCAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCGTAATGATCAAACCACAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTCCAGACCTTCACTGGAGCTTTTCTCCCTCGTTaGGATGTGGTTCCACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLATQIKQAKTSVQTFTGAFLPR*DVVPQK Trigger: CTTCTGTGGAACCACATCCAAACGAGGGAGAAAAGC...TCCAGTGAAGGTCTGGACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS CCA 90 bp | ATATGCTTCAGTCCTAGAGAAATCTGTACAAACCAACACAGGATCTaGTCTTCGCTGAACATCACTCCCCGCTGCCTCTGGATCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ICFSPREICTNQHRI*SSLNITPRCLWILC Trigger: GCAGAGGATCCAGAGGCAGCGGGGAGTGATGTTCAGCGAAGACCAGATCCTGTGTTGGTTTGTACAGATTTCTCTAGGACTGAAGCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
||
| CDS CCA 90 bp | GCTGAGGTATCAAGGACTGTAGGTCACGAGAGAAGTGGGGTGATATaGGAGCAACACGTCCTTGACAAATCTTCAGAACCAGATGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AEVSRTVGHERSGVI*EQHVLDKSSEPDGG Trigger: TCCACCATCTGGTTCTGAAGATTTGTCAAGGACGTGTTGCTCCCATATCACCCCACTTCTCTCGTGACCTACAGTCCTTGATACCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
||
| CDS GCA 90 bp | CCCAGCACATGTTTGAGCAAGTTCCATGGAGTCATTCAGTGTTCTTaGTGTTCCAAAGTCCCCGAGCTTGGCAACCATTCCATTCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSTCLSKFHGVIQCS*CSKVPELGNHSILA Trigger: AGCAAGAATGGAATGGTTGCCAAGCTCGGGGACTTTGGAACAGCAAGAACACTGAATGACTCCATGGAACTTGCTCAAACATGTGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
||
| CDS CCA 90 bp | ATATTGCTGAGCTTCAAATTTCCTCTGAAGGTAGGCAGCAGACCATaGACTAACTCTCCAACAAGCTGTGGGGCCAATGGCCATGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLSFKFPLKVGSRP*TNSPTSCGANGHVL Trigger: GAGAACATGGCCATTGGCCCCACAGCTTGTTGGAGAGTTAGTCCATGGTCTGCTGCCTACCTTCAGAGGAAATTTGAAGCTCAGCAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGCCAAAGTCCCCGAGCTaGGCAACCATTCCATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EISKTADFSLRTWIPTHGPKSPS*ATIPFL Trigger: CAAGAATGGAATGGTTGCCAAGCTCGGGGACTTTGG...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGGGGAGCAACACGTCCTaGACAAATCTTCAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: EISKTADFSLRTWIPTHGGSNTS*TNLQNQ Trigger: CTGGTTCTGAAGATTTGTCAAGGACGTGTTGCTCCC...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGTTCCATCACAATCACTaGGCCATCATCCGGCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: EISKTADFSLRTWIPTHGFHHNH*AIIRHG Trigger: ACCATGCCGGATGATGGCCAAGTGATTGTGATGGAA...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS TCA 90 bp | TGTAGGTCACGAGAGAAGTGGGGTGATATGGGAGCAACACGTCCTTaGCAAATCTTCAGAACCAGATGGTGGAAGTTGTTGCTCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CRSREKWGDMGATRP*QIFRTRWWKLLLSK Trigger: TTTTGAGAGCAACAACTTCCACCATCTGGTTCTGAAGATTTGTCAAGGACGTGTTGCTCCCATATCACCCCACTTCTCTCGTGACCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGGGGAGCAACACGTCCTaGACAAATCTTCAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VCEISKTADFSLRTWIPTGSNTS*TNLQNQ Trigger: CTGGTTCTGAAGATTTGTCAAGGACGTGTTGCTCCC...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATGGGGGGACTGGATTCTTCTaGAACAGACCTCAGGATACA | + |
|
Preference number: 5 (lower is better) Translates to: EISKTADFSLRTWIPTHGGTGFF*NRPQDT Trigger: TGTATCCTGAGGTCTGTTCAAGAAGAATCCAGTCCC...CCCATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGGGGACTGGATTCTTCTaGAACAGACCTCAGGATACA | + |
|
Preference number: 5 (lower is better) Translates to: VCEISKTADFSLRTWIPTGTGFF*NRPQDT Trigger: TGTATCCTGAGGTCTGTTCAAGAAGAATCCAGTCCC...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | CATTTGATGAACCTTGGTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTATTTCCTTCATGTCGTaGTGGTACTGTTGGCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: HLMNLGLSHTDQTGQNQRISFMS*WYCWRI Trigger: AATCCGCCAACAGTACCACAACGACATGAAGGAAAT...ACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGACCAAGGTTCATCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS CCA 90 bp | TGTTCATCATCCACCATGATGCCCGTGGCTATTTCTACCTTTTCCTaGTCTTCTTTAGGAAGCTGTGGTTTGATCATTACGGTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSSTMMPVAISTFS*SSLGSCGLIITVSP Trigger: AGGAGAAACCGTAATGATCAAACCACAGCTTCCTAAAGAAGACCAGGAAAAGGTAGAAATAGCCACGGGCATCATGGTGGATGATGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | CATTTGATGAACCTTGGTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTGAATCACTTCGTTCTTaGAGGCCTCTTTTTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HLMNLGLSHTDQTGQNQRESLRS*RPLFPL Trigger: CAAAGGAAAAAGAGGCCTCAAAGAACGAAGTGATTC...ACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGACCAAGGTTCATCAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS-3UTR CAA 90 bp | TGCTCTTATTTTTCCAAGACAATCAGGCACAGTCAATCTTCCAAGAATCTTCCACCAAAGTCCCCGAGCTaGGCAACCATTCCATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSYFSKTIRHSQSSKNLPPKSPS*ATIPFL Trigger: CAAGAATGGAATGGTTGCCAAGCTCGGGGACTTTGG...TGGAAGATTCTTGGAAGATTGACTGTGCCTGATTGTCTTGGAAAAATAAGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATAGTCATTCAGTGTTCTaGCTGTTCCAAAGTCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CEISKTADFSLRTWIPTHSHSVF*LFQSPR Trigger: TCGGGGACTTTGGAACAGCAAGAACACTGAATGACT...ATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGATTTCCTTCATGTCGTaGTGGTACTGTTGGCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VCEISKTADFSLRTWIPTISFMS*WYCWRI Trigger: AATCCGCCAACAGTACCACAACGACATGAAGGAAAT...CGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTCCAAAGTCCCCGAGCTaGGCAACCATTCCATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRFSLIDGMKAKISIHQSPKSPS*ATIPFL Trigger: CAAGAATGGAATGGTTGCCAAGCTCGGGGACTTTGG...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | CACTCAGTTGTATGTCCTTTTACTTCCATGAGTTTGTGTAACTTTCTGTCGTTTTGTCCCAGCACATGTTaGAGCAAGTTCCATGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HSVVCPFTSMSLCNFLSFCPSTC*SKFHGV Trigger: GACTCCATGGAACTTGCTCAAACATGTGCTGGGACA...AAACGACAGAAAGTTACACAAACTCATGGAAGTAAAAGGACATACAACTGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR CAA 90 bp | CATTTGATGAACCTTGGTCTTAGCCACACAGATCAAACAGGCCAAAACCAGCGTTTTGTTCTTCCTGTATaGAAGCTCCTGGAATTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLMNLGLSHTDQTGQNQRFVLPV*KLLEFS Trigger: ACTAAATTCCAGGAGCTTCAATACAGGAAGAACAAA...ACGCTGGTTTTGGCCTGTTTGATCTGTGTGGCTAAGACCAAGGTTCATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | AAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGAGTGTCGTTGTGGTACTGTaGGCGGATTTCTTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRFSLIDGMKAKISIHQSVVVVL*ADFFQL Trigger: CAGCTGGAAGAAATCCGCCAACAGTACCACAACGAC...ACTCTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCGTCGTTGTGGTACTGTaGGCGGATTTCTTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QTHGNKNKAFQFDRWNESVVVVL*ADFFQL Trigger: CAGCTGGAAGAAATCCGCCAACAGTACCACAACGAC...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCGATGGCATTGAATTCTaGATCCCCCTGCCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTHGNKNKAFQFDRWNESDGIEF*IPLPSC Trigger: GCAGGAAGGCAGGGGGATCAAGAATTCAATGCCATC...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR CAA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCCAGCCTGGACTGGCCTaGATCTTGCTTGTAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QTHGNKNKAFQFDRWNESQPGLA*ILLVAE Trigger: TTCAGCTACAAGCAAGATCAAGGCCAGTCCAGGCTG...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGTGTCCCAGCACATGTTaGAGCAAGTTCCATGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TKRFSLIDGMKAKISIHQCPSTC*SKFHGV Trigger: GACTCCATGGAACTTGCTCAAACATGTGCTGGGACA...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCGCTTTTCTCCCTCGTTaGGATGTGGTTCCACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QTHGNKNKAFQFDRWNESAFLPR*DVVPQK Trigger: CTTCTGTGGAACCACATCCAAACGAGGGAGAAAAGC...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTTCCATCACAATCACTaGGCCATCATCCGGCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: QTHGNKNKAFQFDRWNESFHHNH*AIIRHG Trigger: ACCATGCCGGATGATGGCCAAGTGATTGTGATGGAA...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | CAAACACATGGAAATAAGAACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCAGTCATTCAGTGTTCTaGCTGTTCCAAAGTCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QTHGNKNKAFQFDRWNESSHSVF*LFQSPR Trigger: TCGGGGACTTTGGAACAGCAAGAACACTGAATGACT...GCTTTCATTCCATCTATCAAACTGAAACGCTTTGTTCTTATTTCCATGTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAACTTCTTTTGCAAATTTGTCAAGACTTGCCTTGTGTCCTAAAATGTGGTAGTCATTCAGTGTTCTaGCTGTTCCAAAGTCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FELLLQICQDLPCVLKCGSHSVF*LFQSPR Trigger: TCGGGGACTTTGGAACAGCAAGAACACTGAATGACT...ACCACATTTTAGGACACAAGGCAAGTCTTGACAAATTTGCAAAAGAAGTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210824.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAAATCAGTAAGACAGCGGATTTTTCTTTAAGGACATGGATCCCCACGCATTTTGTTCTTCCTGTATaGAAGCTCCTGGAATTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: CEISKTADFSLRTWIPTHFVLPV*KLLEFS Trigger: ACTAAATTCCAGGAGCTTCAATACAGGAAGAACAAA...ATGCGTGGGGATCCATGTCCTTAAAGAAAAATCCGCTGTCTTACTGATTTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCGTTTCAGTTTGATAGATGGAATGAAAGCTAAAATCAGCATTCATCAGGAATCACTTCGTTCTTaGAGGCCTCTTTTTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TKRFSLIDGMKAKISIHQESLRS*RPLFPL Trigger: CAAAGGAAAAAGAGGCCTCAAAGAACGAAGTGATTC...CTGATGAATGCTGATTTTAGCTTTCATTCCATCTATCAAACTGAAACGCTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS TCA 72 bp | CCCCGGCATCCCACTGCCTCCTGTTCTCTGCGGCAATaGCATCCTGAAAGAAACCCTCTGCTTCTGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRHPTASCSLRQ*HPERNPLLLGH Trigger: GTGGCCCAGAAGCAGAGGGTTTCTTTCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGATGCCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
||
| CDS GCA 72 bp | CACAGGATCTGGTCTTCGCTGAACATCACTCCCCGCTaGCTCTGGATCCTCTGCATGAGATCCCCTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: HRIWSSLNITPR*LWILCMRSPPS Trigger: TGATGGAGGGGATCTCATGCAGAGGATCCAGAGGCAGCGGGGAGTGATGTTCAGCGAAGACCAGATCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
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| CDS TCA 72 bp | TCCCACTGCCTCCTGTTCTCTGCGGCAATGACATCCTaGAAGAAACCCTCTGCTTCTGGGCCACAGAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SHCLLFSAAMTS*KKPSASGPQSS Trigger: AGAACTCTGTGGCCCAGAAGCAGAGGGTTTCTTTCAGGATGTCATTGCCGCAGAGAACAGGAGGCAGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS CAA 90 bp | ACAGAGTTGGGGCAGGATGCCATGCAGCCTGGACTGGCCTTGATCTaGCTTGTAGCTGAAGATGGCATTGAATTCTTGATCCCCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: TELGQDAMQPGLALI*LVAEDGIEFLIPLP Trigger: AGGCAGGGGGATCAAGAATTCAATGCCATCTTCAGCTACAAGCAAGATCAAGGCCAGTCCAGGCTGCATGGCATCCTGCCCCAACTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
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| CDS TCA 72 bp | AAATCTGTACAAACCAACACAGGATCTGGTCTTCGCTaGACATCACTCCCCGCTGCCTCTGGATCCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KSVQTNTGSGLR*TSLPAASGSSA Trigger: TGCAGAGGATCCAGAGGCAGCGGGGAGTGATGTTCAGCGAAGACCAGATCCTGTGTTGGTTTGTACAGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
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| CDS GCA 72 bp | GTTCTCTGCGGCAATGACATCCTGAAAGAAACCCTCTaGTTCTGGGCCACAGAGTTCTTCAAAGGCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VLCGNDILKETL*FWATEFFKGSV Trigger: GACAGAGCCTTTGAAGAACTCTGTGGCCCAGAAGCAGAGGGTTTCTTTCAGGATGTCATTGCCGCAGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS CAA 72 bp | GGGCAGGATGCCATGCAGCCTGGACTGGCCTTGATCTaGCTTGTAGCTGAAGATGGCATTGAATTCTTGATC | + |
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Preference number: 6 (lower is better) Translates to: GQDAMQPGLALI*LVAEDGIEFLI Trigger: GATCAAGAATTCAATGCCATCTTCAGCTACAAGCAAGATCAAGGCCAGTCCAGGCTGCATGGCATCCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169834.2 |
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| CDS TCA 72 bp | CATCCGATCCTGGTTCCAGCTGTTCATCATCCACCATaGTGCCCGTGGCTATTTCTACCTTTTCCTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: HPILVPAVHHPP*CPWLFLPFPGL Trigger: AAGACCAGGAAAAGGTAGAAATAGCCACGGGCATCATGGTGGATGATGAACAGCTGGAACCAGGATCGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS CAA 72 bp | CTCTGGGGACAGGTAGTAAGGTGTCCCAGCACATGTTaGAGCAAGTTCCATGGAGTCATTCAGTGTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LWGQVVRCPSTC*SKFHGVIQCSC Trigger: GCAAGAACACTGAATGACTCCATGGAACTTGCTCAAACATGTGCTGGGACACCTTACTACCTGTCCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
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| CDS CAA 90 bp | TCCCAGCACATGTTTGAGCAAGTTCCATGGAGTCATTCAGTGTTCTaGCTGTTCCAAAGTCCCCGAGCTTGGCAACCATTCCATTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SQHMFEQVPWSHSVF*LFQSPRAWQPFHSC Trigger: GCAAGAATGGAATGGTTGCCAAGCTCGGGGACTTTGGAACAGCAAGAACACTGAATGACTCCATGGAACTTGCTCAAACATGTGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
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| CDS TCA 72 bp | TTTGATCATTACGGTTTCTCCTTTACTGGCAGACAATaGGCCACTGCAGGCACACTCTGCTGCCAAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: FDHYGFSFTGRQ*ATAGTLCCQST Trigger: TGTGCTTTGGCAGCAGAGTGTGCCTGCAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCGTAATGATCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS CCA 72 bp | TGCGGCAATGACATCCTGAAAGAAACCCTCTGCTTCTaGGCCACAGAGTTCTTCAAAGGCTCTGTCTGTATA | + |
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Preference number: 6 (lower is better) Translates to: CGNDILKETLCF*ATEFFKGSVCI Trigger: TATACAGACAGAGCCTTTGAAGAACTCTGTGGCCCAGAAGCAGAGGGTTTCTTTCAGGATGTCATTGCCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS CAA 90 bp | CTGACAGATCTCTGGGGACAGGTAGTAAGGTGTCCCAGCACATGTTaGAGCAAGTTCCATGGAGTCATTCAGTGTTCTTGCTGTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LTDLWGQVVRCPSTC*SKFHGVIQCSCCSK Trigger: TTTGGAACAGCAAGAACACTGAATGACTCCATGGAACTTGCTCAAACATGTGCTGGGACACCTTACTACCTGTCCCCAGAGATCTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
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| CDS TCA 72 bp | CCAGATGGTGGAAGTTGTTGCTCTCAAAAGGATGCTTaGGTGTGCAGAGCTCATATAAGACACAGCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: PDGGSCCSQKDA*VCRAHIRHSQE Trigger: CTCTTGGCTGTGTCTTATATGAGCTCTGCACACTCAAGCATCCTTTTGAGAGCAACAACTTCCACCATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
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| CDS CAA 72 bp | ATGTTTGAGCAAGTTCCATGGAGTCATTCAGTGTTCTaGCTGTTCCAAAGTCCCCGAGCTTGGCAACCATTC | + |
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Preference number: 6 (lower is better) Translates to: MFEQVPWSHSVF*LFQSPRAWQPF Trigger: GAATGGTTGCCAAGCTCGGGGACTTTGGAACAGCAAGAACACTGAATGACTCCATGGAACTTGCTCAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
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| CDS GCA 72 bp | AGAACCAGATGGTGGAAGTTGTTGCTCTCAAAAGGATaGTTGAGTGTGCAGAGCTCATATAAGACACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RTRWWKLLLSKG*LSVQSSYKTQP Trigger: TGGCTGTGTCTTATATGAGCTCTGCACACTCAAGCATCCTTTTGAGAGCAACAACTTCCACCATCTGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 ENSMUST00000210824.2 |
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| CDS CAA 90 bp | GTGGCTATTTCTACCTTTTCCTGGTCTTCTTTAGGAAGCTGTGGTTaGATCATTACGGTTTCTCCTTTACTGGCAGACAATGAGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: VAISTFSWSSLGSCG*IITVSPLLADNEPL Trigger: CAGTGGCTCATTGTCTGCCAGTAAAGGAGAAACCGTAATGATCAAACCACAGCTTCCTAAAGAAGACCAGGAAAAGGTAGAAATAGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS CCA 72 bp | AGATTCTTCAAATTTTATGTCATCTTCATCCGATCCTaGTTCCAGCTGTTCATCATCCACCATGATGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: RFFKFYVIFIRS*FQLFIIHHDAR Trigger: ACGGGCATCATGGTGGATGATGAACAGCTGGAACCAGGATCGGATGAAGATGACATAAAATTTGAAGAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209656.2 |
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| CDS CAA 72 bp | ACAGTATTCCATTACAATAAACAGCCTGCCGTTCTCTaGAAACGAGCTGAAGAAGGTTACGATATTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: TVFHYNKQPAVL*KRAEEGYDIGM Trigger: CATCCCAATATCGTAACCTTCTTCAGCTCGTTTCAAGAGAACGGCAGGCTGTTTATTGTAATGGAATACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS CAA 72 bp | TCTACCTTTTCCTGGTCTTCTTTAGGAAGCTGTGGTTaGATCATTACGGTTTCTCCTTTACTGGCAGACAAT | + |
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Preference number: 6 (lower is better) Translates to: STFSWSSLGSCG*IITVSPLLADN Trigger: ATTGTCTGCCAGTAAAGGAGAAACCGTAATGATCAAACCACAGCTTCCTAAAGAAGACCAGGAAAAGGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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| CDS CCA 72 bp | TATTTCTACCTTTTCCTGGTCTTCTTTAGGAAGCTGTaGTTTGATCATTACGGTTTCTCCTTTACTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: YFYLFLVFFRKL*FDHYGFSFTGR Trigger: TCTGCCAGTAAAGGAGAAACCGTAATGATCAAACCACAGCTTCCTAAAGAAGACCAGGAAAAGGTAGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169834.2 ENSMUST00000209656.2 |
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