Pregenerated sensors for NEK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021918Ensembl transcript IDs: ENSMUST00000050171.10, ENSMUST00000226146.2, ENSMUST00000226551.2, ENSMUST00000226833.2, ENSMUST00000228328.2
Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTTGCGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTaGACTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: TCGGWRDGSVVKSTD*TSRGPEFKSQQPHG Trigger: ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGTGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCGCAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR CCA 90 bp | GTTGACACTTTATTGTACATAAAGACAAACATCACTTGCGGGGGCTaGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCACTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: VDTLLYIKTNITCGG*RDGSVVKSTDCTSR Trigger: TCTGGAAGTGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCGCAAGTGATGTTTGTCTTTATGTACAATAAAGTGTCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR GCA 90 bp | CACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTaGATCCAGCCTTACAGCTACATATTTAAAATATGGGAACTCAGT | + |
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Preference number: 1 (lower is better) Translates to: HRLWFSGARITSVNY*IQPYSYIFKIWELS Trigger: ACTGAGTTCCCATATTTTAAATATGTAGCTGTAAGGCTGGATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR TCA 90 bp | TGCATCCAGCCTTACAGCTACATATTTAAAATATGGGAACTCAGTTaGCACTTTATTGTACATAAAGACAAACATCACTTGCGGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: CIQPYSYIFKIWELS*HFIVHKDKHHLRGL Trigger: CAGCCCCCGCAAGTGATGTTTGTCTTTATGTACAATAAAGTGTCAACTGAGTTCCCATATTTTAAATATGTAGCTGTAAGGCTGGATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR-3UTR TCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCGGTGACCAGCCTCTaGATGACTGGAACAGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQAVTSL*MTGTGL Trigger: CAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGC...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATAAGCTATACGTTAGGTTaGACAAGAGTTCTAAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LMPSSGVSEDSSSVLIYISYTLG*TRVLRV Trigger: GACCCTTAGAACTCTTGTTCAACCTAACGTATAGCT...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAACACTTCCAGAGGTCCTaGGTTCAAATCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKHFQRS*VQIPAT Trigger: GGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGTG...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAGAGTTCCTTTCTCTTGTTaGTTCTATCACTGTAGTACA | + |
|
Preference number: 2 (lower is better) Translates to: PEFKSQQPHGGSQPFVMRVPFSC*FYHCST Trigger: TGTACTACAGTGATAGAAGCAACAAGAGAAAGGAAC...TCTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAAGCTATACGTTAGGTTaGACAAGAGTTCTAAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKSYTLG*TRVLRV Trigger: GACCCTTAGAACTCTTGTTCAACCTAACGTATAGCT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR-3UTR GCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAACCTGGACTTAGACACTaGTTAATTGAAAAAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKPGLRH*LIEKGT Trigger: AGTTCCTTTTTCAATTAAGCAGTGTCTAAGTCCAGG...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR CCA 72 bp | CAAACATCACTTGCGGGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGCACTTCCAGAGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QTSLAGAGEMAQ*LRALTALPEVL Trigger: CAGGACCTCTGGAAGTGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCGCAAGTGATGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR TCA 72 bp | GGAGATATCAAGCAAAGGATGGCGGTGACCAGCCTCTaGATGACTGGAACAGGGTTGGTGATGGTGGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: GDIKQRMAVTSL*MTGTGLVMVVV Trigger: CACCACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTTTGCTTGATATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR CCA 72 bp | TCAGAGGTTCAGTCCATTATCATTAAGGCGGGAACATaGCAGCATCCGAGCAGGCATGGTGCAGGAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SEVQSIIIKAGT*QHPSRHGAGGA Trigger: AGCTCCTCCTGCACCATGCCTGCTCGGATGCTGCCATGTTCCCGCCTTAATGATAATGGACTGAACCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR TCA 72 bp | GATTTCACTCTGTCATCCAGACTAGCACTGAACTCATaGCCCACCGCCTCTGGTTCTCAGGTGCCAGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: DFTLSSRLALNS*PTASGSQVPGL Trigger: TAATCCTGGCACCTGAGAACCAGAGGCGGTGGGTCATGAGTTCAGTGCTAGTCTGGATGACAGAGTGAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTTGCATACTCTAGTAGGAACCACTCTCTTTaGCCCCATCTACCCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: PRPKITQRVEFCLLAYSSRNHSL*PHLPSQ Trigger: TTGGCTGGGTAGATGGGGCAAAAGAGAGTGGTTCCT...ACTAGAGTATGCAAGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| 3UTR CCA 72 bp | TTATTGTACATAAAGACAAACATCACTTGCGGGGGCTaGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLYIKTNITCGG*RDGSVVKSTDC Trigger: GCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCGCAAGTGATGTTTGTCTTTATGTACAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR TCA 72 bp | ACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTaGACTATTGCATCCAGCCTTACAGCTACATATTTA | + |
|
Preference number: 3 (lower is better) Translates to: TASGSQVPGLQV*TIASSLTATYL Trigger: TAAATATGTAGCTGTAAGGCTGGATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR CCA 72 bp | GACAACACCATGACCAAGGCAACTCTTAATTGGGGCTaGCTTAGAGGTTCAGAGGTTCAGTCCATTATCATT | + |
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Preference number: 3 (lower is better) Translates to: DNTMTKATLNWG*LRGSEVQSIII Trigger: AATGATAATGGACTGAACCTCTGAACCTCTAAGCCAGCCCCAATTAAGAGTTGCCTTGGTCATGGTGTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR TCA 72 bp | TTTGTAATGAGATCTGATGCCCTCTTCTGGTGTGTCTaGAGACAGCTCCAGTGTACTCATATACATACAATA | + |
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Preference number: 3 (lower is better) Translates to: FVMRSDALFWCV*RQLQCTHIHTI Trigger: TATTGTATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR GCA 72 bp | TGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTaGATCCAGCCTTACAGCTACATATTTAAAATATGG | + |
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Preference number: 3 (lower is better) Translates to: WFSGARITSVNY*IQPYSYIFKIW Trigger: CCATATTTTAAATATGTAGCTGTAAGGCTGGATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR GCA 72 bp | ATGAAAACATATGTAAATTTAGGAACCACTCTCTTTTaGCCCATCTACCCAGCCAAGCTATCTGGAAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: MKTYVNLGTTLF*PIYPAKLSGKE Trigger: TTCCTTTCCAGATAGCTTGGCTGGGTAGATGGGGCAAAAGAGAGTGGTTCCTAAATTTACATATGTTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR TCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTGCACTTGGAGTTCTCTaGACTGCAGGGCCTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGALGVL*TAGPEG Trigger: GCCCTCAGGCCCTGCAGTTCAGAGAACTCCAAGTGC...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTAATAGGGTGTGCCAATaGGGGTGCTCGCCATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGNRVCQ*GCSPCH Trigger: GTGACATGGCGAGCACCCTCATTGGCACACCCTATT...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTAAGGCCATGGCGATCTaGACAAACCACTCCACCACC | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGKAMAI*TNHSTT Trigger: GGTGGTGGAGTGGTTTGTCCAGATCGCCATGGCCTT...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCAACCACTCCACCACCTaGCTCTCAGGCAGAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCINHSTT*LSGRSC Trigger: GCAGCTTCTGCCTGAGAGTCAGGTGGTGGAGTGGTT...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTACCTGCTCTAAGAGTTaGATCCCCAGGCCCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGTCSKS*IPRPWI Trigger: AATCCAGGGCCTGGGGATTCAACTCTTAGAGCAGGT...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTGGGTTCCACCTCTTCTaGAACCTTGCCATGAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGGFHLF*NLAMKH Trigger: GTGCTTCATGGCAAGGTTGCAGAAGAGGTGGAACCC...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTATCGTTGGGCAGGGATaGGTTGGTCTTCTTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGIVGQG*VGLLPV Trigger: CACAGGAAGAAGACCAACCCATCCCTGCCCAACGAT...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCGCCCTTTCTGCTCCTTaGGCTTCCGGTACAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCIALSAP*ASGTDH Trigger: GTGATCTGTACCGGAAGCTCAAGGAGCAGAAAGGGC...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | AATTCTGAGGCCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTTGCTTGCCGTCTCGCCGATaGTTCACGAGCGTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSEAQAKNHPEGRILSPCLPSRR*FTSVTS Trigger: GGAGGTGACGCTCGTGAAGCATCGGCGAGACGGCAA...GCAAGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGGCCTCAGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR CCA 90 bp | GAACCACTCTCTTTTGCCCCATCTACCCAGCCAAGCTATCTGGAAAGGAAGTGTCTCGACGCTCTCGGCTaGAGGCATTTCGGAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: EPLSFAPSTQPSYLERKCLDALG*RHFGGS Trigger: TGAACCTCCGAAATGCCTCCAGCCGAGAGCGTCGAG...ACACTTCCTTTCCAGATAGCTTGGCTGGGTAGATGGGGCAAAAGAGAGTGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTGGCTCAACTGCACTTaGAGTTCTCTGAACTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGWLNCT*SSLNCR Trigger: CCTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | GAACCACTCTCTTTTGCCCCATCTACCCAGCCAAGCTATCTGGAAAGGAAGTGTGCCCTTTCTGCTCCTTaGGCTTCCGGTACAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: EPLSFAPSTQPSYLERKCALSAP*ASGTDH Trigger: GTGATCTGTACCGGAAGCTCAAGGAGCAGAAAGGGC...ACACTTCCTTTCCAGATAGCTTGGCTGGGTAGATGGGGCAAAAGAGAGTGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAGAGCACTTGGAGTTCTCTaGACTGCAGGGCCTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PEFKSQQPHGGSQPFVMRALGVL*TAGPEG Trigger: GCCCTCAGGCCCTGCAGTTCAGAGAACTCCAAGTGC...TCTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCTCCAGCCTCAGAGTCTaGGTCATCAGCTGTACCAAG | + |
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Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCISSLRV*VISCTK Trigger: CTTGGTACAGCTGATGACTCAGACTCTGAGGCTGGA...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTGGGACCAATGTCCACTaGTTTCTCTTGGGACAAACA | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGGTNVH*FLLGQT Trigger: TGTTTGTCCCAAGAGAAACCAGTGGACATTGGTCCC...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTGCCACAGGTCCACCTTaGTTTCCATCATTTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGATGPP*FPSFCC Trigger: ACAGCAAAATGATGGAAACCAAGGTGGACCTGTGGC...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTTCCTGTGGTTTCAGTaGCTCAACTGCACTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGFLWFQ*LNCTWS Trigger: ACTCCAAGTGCAGTTGAGCCACTGAAACCACAGGAA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTTGGTCTTCTTCCTGTaGTTTCAGTGGCTCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGLVFFL*FQWLNC Trigger: GCAGTTGAGCCACTGAAACCACAGGAAGAAGACCAA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTTGCATACTCTAGTAACCACTCCACCACCTaGCTCTCAGGCAGAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRPKITQRVEFCLLAYSSNHSTT*LSGRSC Trigger: GCAGCTTCTGCCTGAGAGTCAGGTGGTGGAGTGGTT...ACTAGAGTATGCAAGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR TCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGCACTTGGAGTTCTCTaGACTGCAGGGCCTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAALGVL*TAGPEG Trigger: GCCCTCAGGCCCTGCAGTTCAGAGAACTCCAAGTGC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTGTGATTCATCTGAGTaGTGCTGCAGTCAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGCDSSE*CCSQKR Trigger: TCTCTTCTGACTGCAGCATCACTCAGATGAATCACA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | GAACCACTCTCTTTTGCCCCATCTACCCAGCCAAGCTATCTGGAAAGGAAGTGTAGAAGCTGCCCTTTCTaGTCCTTGAGCTTCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: EPLSFAPSTQPSYLERKCRSCPF*SLSFRY Trigger: GTACCGGAAGCTCAAGGAGCAGAAAGGGCAGCTTCT...ACACTTCCTTTCCAGATAGCTTGGCTGGGTAGATGGGGCAAAAGAGAGTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTTGCCGTCTCGCCGATaGTTCACGAGCGTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMALPSRR*FTSVTS Trigger: GGAGGTGACGCTCGTGAAGCATCGGCGAGACGGCAA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTTGCCGTCTCGCCGATaGTTCACGAGCGTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTLPSRR*FTSVTS Trigger: GGAGGTGACGCTCGTGAAGCATCGGCGAGACGGCAA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCCAGCAGCAACAGGCTTaGCTCTGGAGTCACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCIQQQQA*LWSHSF Trigger: AAAACTGTGACTCCAGAGCCAAGCCTGTTGCTGCTG...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCTGGCTCAACTGCACTTaGAGTTCTCTGAACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCIWLNCT*SSLNCR Trigger: CCTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCA...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTGATCTTTTCAGAACCTaGTATGATACCCGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGDLFRT*YDTRRQ Trigger: CTGCCTACGGGTATCATACCAGGTTCTGAAAAGATC...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGAACCACTCCACCACCTaGCTCTCAGGCAGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMANHSTT*LSGRSC Trigger: GCAGCTTCTGCCTGAGAGTCAGGTGGTGGAGTGGTT...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATAAATAGGGTGTGCCAATaGGGGTGCTCGCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYINRVCQ*GCSPCH Trigger: GTGACATGGCGAGCACCCTCATTGGCACACCCTATT...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTTCATTTCATTTGTATaGCTCTTCCCCTCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGFISFV*LFPSLE Trigger: TTCCAGGGAGGGGAAGAGTCATACAAATGAAATGAA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTCTCGATACTTTCGATaGAGTCTGAATTCTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGSRYFR*SLNSDP Trigger: AGGGTCAGAATTCAGACTTCATCGAAAGTATCGAGA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCGCTCAGCCAGCTCTGTaGTGTAAACTTTTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCIAQPAL*CKLLAL Trigger: CAATGCCAAAAGTTTACAGCACAGAGCTGGCTGAGC...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCTTTTTCTGCCTTCGCTaGCGGGACAAAGAAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCIFFCLR*RDKEGS Trigger: TGAACCTTCTTTGTCCCGGCAGCGAAGGCAGAAAAA...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGCTCGACGCTCTCGGCTaGAGGCATTTCGGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMALDALG*RHFGGS Trigger: TGAACCTCCGAAATGCCTCCAGCCGAGAGCGTCGAG...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCCTCGACGCTCTCGGCTaGAGGCATTTCGGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTLDALG*RHFGGS Trigger: TGAACCTCCGAAATGCCTCCAGCCGAGAGCGTCGAG...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCAAGCGTGCTTCAGGGTaGCCATTTCATATACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCIKRASG*PFHIHS Trigger: GCTGTGTATATGAAATGGCCACCCTGAAGCACGCTT...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCTTCCTGTGGTTTCAGTaGCTCAACTGCACTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCIFLWFQ*LNCTWS Trigger: ACTCCAAGTGCAGTTGAGCCACTGAAACCACAGGAA...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGCCCTTTCTGCTCCTTaGGCTTCCGGTACAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTALSAP*ASGTDH Trigger: GTGATCTGTACCGGAAGCTCAAGGAGCAGAAAGGGC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGCCCTTTCTGCTCCTTaGGCTTCCGGTACAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAALSAP*ASGTDH Trigger: GTGATCTGTACCGGAAGCTCAAGGAGCAGAAAGGGC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTGTTTTCAGATCTCGATaGAGGATGTGTTTCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGVFRSR*RMCFSC Trigger: ACATGAGAAACACATCCTTCATCGAGATCTGAAAAC...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGAATAGGGTGTGCCAATaGGGGTGCTCGCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMANRVCQ*GCSPCH Trigger: GTGACATGGCGAGCACCCTCATTGGCACACCCTATT...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | TTAAATTCTGAGGCCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTAATAGGGTGTGCCAATaGGGGTGCTCGCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNSEAQAKNHPEGRILSPNRVCQ*GCSPCH Trigger: GTGACATGGCGAGCACCCTCATTGGCACACCCTATT...AGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGGCCTCAGAATTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
||
| CDS-3UTR GCA 90 bp | CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAGAAGAAGCTGCCCTTTCTaGTCCTTGAGCTTCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PEFKSQQPHGGSQPFVMRRSCPF*SLSFRY Trigger: GTACCGGAAGCTCAAGGAGCAGAAAGGGCAGCTTCT...TCTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTATTTTTGGAAGTTTTTaGCTTGGTGGCCTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGIFGSF*LGGLQE Trigger: TTCTTGGAGGCCACCAAGGCAAAAACTTCCAAAAAT...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCTGTTCATGTCTTGTTTaGCAGTGTGGCCTTCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCICSCLV*QCGLQD Trigger: GTCTTGAAGGCCACACTGGCAAACAAGACATGAACA...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATAGGGTTCCACCTCTTCTaGAACCTTGCCATGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIGFHLF*NLAMKH Trigger: GTGCTTCATGGCAAGGTTGCAGAAGAGGTGGAACCC...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTTGATTCTTCCTTTCTaGAAACTACAGCAGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGLILPF*KLQQQQ Trigger: CTGTTGCTGCTGTAGTTTCCAGAAAGGAAGAATCAA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCCTTCGCAGAAGCCCATaGCAATGTAGAGCAGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTLRRSP*QCRADR Trigger: ACGGTCTGCTCTACATTGTCATGGGCTTCTGCGAAG...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | TTAAATTCTGAGGCCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTCTTCGCAGAAGCCCATaGCAATGTAGAGCAGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNSEAQAKNHPEGRILSPLRRSP*QCRADR Trigger: ACGGTCTGCTCTACATTGTCATGGGCTTCTGCGAAG...AGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGGCCTCAGAATTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
||
| CDS-3UTR TCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTATCACGTCAGTATTTaGTTCTTCCTTTCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGYHVSI*FFLSGN Trigger: GTTTCCAGAAAGGAAGAATCAAATACTGACGTGATA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTCCAGCCTCAGAGTCTaGGTCATCAGCTGTACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMASSLRV*VISCTK Trigger: CTTGGTACAGCTGATGACTCAGACTCTGAGGCTGGA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTCCAGCCTCAGAGTCTaGGTCATCAGCTGTACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTSSLRV*VISCTK Trigger: CTTGGTACAGCTGATGACTCAGACTCTGAGGCTGGA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCTCTCGATACTTTCGATaGAGTCTGAATTCTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCISRYFR*SLNSDP Trigger: AGGGTCAGAATTCAGACTTCATCGAAAGTATCGAGA...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | AATTCTGAGGCCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTTGCGCTCAGCCAGCTCTGTaGTGTAAACTTTTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: NSEAQAKNHPEGRILSPCAQPAL*CKLLAL Trigger: CAATGCCAAAAGTTTACAGCACAGAGCTGGCTGAGC...GCAAGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGGCCTCAGAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
||
| CDS-3UTR GCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTCTCTTGAGAAATACTaGACTGACTGTCTACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGSLEKY*TDCLLH Trigger: ATGAAGTAGACAGTCAGTGCAGTATTTCTCAAGAGA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTATCATTTTGCTGTGTTaGTATGATATCCACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGIILLC*YDIHFP Trigger: GGGAAAGTGGATATCATAGCAACACAGCAAAATGAT...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTGGTTTCCATCATTTTaGTGTGTTGCTATGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGWFPSF*CVAMIS Trigger: GGATATCATAGCAACACAGCAAAATGATGGAAACCA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGCCTCTTCTGCAACCTTaGCATGAAGCACCAGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAPLLQP*HEAPAC Trigger: ACACGCTGGTGCTTCATGGCAAGGTTGCAGAAGAGG...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCCCTCTTCTGCAACCTTaGCATGAAGCACCAGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTPLLQP*HEAPAC Trigger: ACACGCTGGTGCTTCATGGCAAGGTTGCAGAAGAGG...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGGGTTCCACCTCTTCTaGAACCTTGCCATGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTGFHLF*NLAMKH Trigger: GTGCTTCATGGCAAGGTTGCAGAAGAGGTGGAACCC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAACTCGACGCTCTCGGCTaGAGGCATTTCGGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQLDALG*RHFGGS Trigger: TGAACCTCCGAAATGCCTCCAGCCGAGAGCGTCGAG...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGGCATCCACGTGTTGTaGTTGGCTCTCCTGAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTGIHVL*LALLNY Trigger: GTAGTTCAGGAGAGCCAACCACAACACGTGGATGCC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGGCATCCACGTGTTGTaGTTGGCTCTCCTGAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAGIHVL*LALLNY Trigger: GTAGTTCAGGAGAGCCAACCACAACACGTGGATGCC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATATCAGAAGAGAATCGTTaGGCAGGGATGGGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYISEENR*AGMGWS Trigger: AGACCAACCCATCCCTGCCCAACGATTCTCTTCTGA...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGCCTGGGTTTAGGACCTaGAGATCTTCACAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAPGFRT*RSSQLS Trigger: GGAGAGCTGTGAAGATCTCCAGGTCCTAAACCCAGG...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCTCCTGGTCTGGCTTTTaGTCTTTATTTGAGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: THRLWFSGARITSVNYCISWSGF*SLFEGY Trigger: GTATCCCTCAAATAAAGACCAAAAGCCAGACCAGGA...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAGAAGGAGATTTCCAGGCTaGTCACTGGACTTGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: PEFKSQQPHGGSQPFVMRRRFPG*SLDLVL Trigger: CAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCT...TCTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTAGAATTCATGTCTTTTaGATTAAAAGCGTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGRIHVF*IKSVLQ Trigger: CTGAAGCACGCTTTTAATGCAAAAGACATGAATTCT...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGCAGCAGCAACAGGCTTaGCTCTGGAGTCACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAQQQQA*LWSHSF Trigger: AAAACTGTGACTCCAGAGCCAAGCCTGTTGCTGCTG...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATAGGGACCAATGTCCACTaGTTTCTCTTGGGACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIGTNVH*FLLGQT Trigger: TGTTTGTCCCAAGAGAAACCAGTGGACATTGGTCCC...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGCGAGGGGGTAATTCTTaGAACTGGTCTGGCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMARGGNS*NWSGFW Trigger: CCAAAAGCCAGACCAGTTCCAAGAATTACCCCCTCG...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCCGAGGGGGTAATTCTTaGAACTGGTCTGGCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTRGGNS*NWSGFW Trigger: CCAAAAGCCAGACCAGTTCCAAGAATTACCCCCTCG...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTGGCTCAACTGCACTTaGAGTTCTCTGAACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAWLNCT*SSLNCR Trigger: CCTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATATTGGTCTTCTTCCTGTaGTTTCAGTGGCTCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYILVFFL*FQWLNC Trigger: GCAGTTGAGCCACTGAAACCACAGGAAGAAGACCAA...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTCAGAAGAGAATCGTTaGGCAGGGATGGGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMASEENR*AGMGWS Trigger: AGACCAACCCATCCCTGCCCAACGATTCTCTTCTGA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGATGATCAAAAAGCATaGGACTGGCTGGGTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQDDQKA*DWLGGV Trigger: CACCCCACCCAGCCAGTCTCATGCTTTTTGATCATC...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050171.10 |
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| CDS-3UTR TCA 90 bp | TTAAATTCTGAGGCCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTGTCTCCTCCCTCCCATaGTTCTTTGTAGGTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNSEAQAKNHPEGRILSPVSSLP*FFVGDN Trigger: ATTGTCACCTACAAAGAATCATGGGAGGGAGGAGAC...AGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGGCCTCAGAATTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
||
| CDS-3UTR TCA 90 bp | GAACCACTCTCTTTTGCCCCATCTACCCAGCCAAGCTATCTGGAAAGGAAGTGTGTTTTCAGATCTCGATaGAGGATGTGTTTCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: EPLSFAPSTQPSYLERKCVFRSR*RMCFSC Trigger: ACATGAGAAACACATCCTTCATCGAGATCTGAAAAC...ACACTTCCTTTCCAGATAGCTTGGCTGGGTAGATGGGGCAAAAGAGAGTGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCAGGAGATTTCCAGGCTaGTCACTGGACTTGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTRRFPG*SLDLVL Trigger: CAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCT...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAACCTGCTCTAAGAGTTaGATCCCCAGGCCCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQTCSKS*IPRPWI Trigger: AATCCAGGGCCTGGGGATTCAACTCTTAGAGCAGGT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAAGAAGCTGCCCTTTCTaGTCCTTGAGCTTCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQRSCPF*SLSFRY Trigger: GTACCGGAAGCTCAAGGAGCAGAAAGGGCAGCTTCT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGCTCAGCCAGCTCTGTaGTGTAAACTTTTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAAQPAL*CKLLAL Trigger: CAATGCCAAAAGTTTACAGCACAGAGCTGGCTGAGC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAACCTCTTCTGCAACCTTaGCATGAAGCACCAGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQPLLQP*HEAPAC Trigger: ACACGCTGGTGCTTCATGGCAAGGTTGCAGAAGAGG...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGAGTTGTAGGGTTTGTTaGAGAACAGCTCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMASCRVC*RTAQGS Trigger: TGAGCCCTGAGCTGTTCTCCAACAAACCCTACAACT...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCAGTTGTAGGGTTTGTTaGAGAACAGCTCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTSCRVC*RTAQGS Trigger: TGAGCCCTGAGCTGTTCTCCAACAAACCCTACAACT...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | TTAAATTCTGAGGCCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTAGTTGTAGGGTTTGTTaGAGAACAGCTCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNSEAQAKNHPEGRILSPSCRVC*RTAQGS Trigger: TGAGCCCTGAGCTGTTCTCCAACAAACCCTACAACT...AGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGGCCTCAGAATTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTTGCATACTCTAGTTGTGCTGTAAACTTTTaGCATTGGCGGCAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRPKITQRVEFCLLAYSSCAVNF*HWRQLS Trigger: GGAAAGTTGCCGCCAATGCCAAAAGTTTACAGCACA...ACTAGAGTATGCAAGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGGGACCAATGTCCACTaGTTTCTCTTGGGACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTGTNVH*FLLGQT Trigger: TGTTTGTCCCAAGAGAAACCAGTGGACATTGGTCCC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGGCATCCACGTGTTGTaGTTGGCTCTCCTGAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQGIHVL*LALLNY Trigger: GTAGTTCAGGAGAGCCAACCACAACACGTGGATGCC...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGCCACAGGTCCACCTTaGTTTCCATCATTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTATGPP*FPSFCC Trigger: ACAGCAAAATGATGGAAACCAAGGTGGACCTGTGGC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTTCCTGTGGTTTCAGTaGCTCAACTGCACTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTFLWFQ*LNCTWS Trigger: ACTCCAAGTGCAGTTGAGCCACTGAAACCACAGGAA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTTGGTCTTCTTCCTGTaGTTTCAGTGGCTCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMALVFFL*FQWLNC Trigger: GCAGTTGAGCCACTGAAACCACAGGAAGAAGACCAA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAATCGTTGGGCAGGGATaGGTTGGTCTTCTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQIVGQG*VGLLPV Trigger: CACAGGAAGAAGACCAACCCATCCCTGCCCAACGAT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATAGATCTTTTCAGAACCTaGTATGATACCCGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIDLFRT*YDTRRQ Trigger: CTGCCTACGGGTATCATACCAGGTTCTGAAAAGATC...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGACGAGGCAGGAGGATaGTCAAAAAGCATGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQDEAGG*SKSMRL Trigger: CAGTCTCATGCTTTTTGATCATCCTCCTGCCTCGTC...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050171.10 |
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| CDS-3UTR TCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAAACCACTCCACCACCTaGCTCTCAGGCAGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKNHSTT*LSGRSC Trigger: GCAGCTTCTGCCTGAGAGTCAGGTGGTGGAGTGGTT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTGTGATTCATCTGAGTaGTGCTGCAGTCAGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTCDSSE*CCSQKR Trigger: TCTCTTCTGACTGCAGCATCACTCAGATGAATCACA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATATTCATTTCATTTGTATaGCTCTTCCCCTCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIFISFV*LFPSLE Trigger: TTCCAGGGAGGGGAAGAGTCATACAAATGAAATGAA...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATAGGGTGGATGCTGTCCTaGTTTTCTATAATACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIGWMLS*FSIIPV Trigger: TACTGGTATTATAGAAAATCAGGACAGCATCCACCC...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATATTTGCATTAAAAGCGTaGTTCAGGGTGGCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIFALKA*FRVAIS Trigger: TGAAATGGCCACCCTGAAGCACGCTTTTAATGCAAA...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAGATTTGCATTAAAAGCGTaGTTCAGGGTGGCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PEFKSQQPHGGSQPFVMRFALKA*FRVAIS Trigger: TGAAATGGCCACCCTGAAGCACGCTTTTAATGCAAA...TCTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTGTTCATGTCTTGTTTaGCAGTGTGGCCTTCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTCSCLV*QCGLQD Trigger: GTCTTGAAGGCCACACTGGCAAACAAGACATGAACA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | ATCACCCAGAGGGTAGAATTTTGTCTCCTTGCATACTCTAGTCATGCAGTTTTCAAGCGTGCTTCAGGGTaGCCATTTCATATACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITQRVEFCLLAYSSHAVFKRASG*PFHIHS Trigger: GCTGTGTATATGAAATGGCCACCCTGAAGCACGCTT...GAAAACTGCATGACTAGAGTATGCAAGGAGACAAAATTCTACCCTCTGGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTGTGCTGTAAACTTTTaGCATTGGCGGCAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTCAVNF*HWRQLS Trigger: GGAAAGTTGCCGCCAATGCCAAAAGTTTACAGCACA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTGTGCTGTAAACTTTTaGCATTGGCGGCAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMACAVNF*HWRQLS Trigger: GGAAAGTTGCCGCCAATGCCAAAAGTTTACAGCACA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATGGCTCAACTGCACTTaGAGTTCTCTGAACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQWLNCT*SSLNCR Trigger: CCTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATCAGAAGAGAATCGTTaGGCAGGGATGGGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQSEENR*AGMGWS Trigger: AGACCAACCCATCCCTGCCCAACGATTCTCTTCTGA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGATCTTTTCAGAACCTaGTATGATACCCGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMADLFRT*YDTRRQ Trigger: CTGCCTACGGGTATCATACCAGGTTCTGAAAAGATC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCCGCTGGTCTGGCTTTTaGTCTTTATTTGAGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTRWSGF*SLFEGY Trigger: GTATCCCTCAAATAAAGACCAAAAGCCAGACCAGCG...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226146.2 |
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| CDS-3UTR TCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGTCTCCTCCCTCCCATaGTTCTTTGTAGGTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQVSSLP*FFVGDN Trigger: ATTGTCACCTACAAAGAATCATGGGAGGGAGGAGAC...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAAGGAGATTTCCAGGCTaGTCACTGGACTTGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQRRFPG*SLDLVL Trigger: CAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATACTTTTGGTCTTTATTTaGGGGATACAATGGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYILLVFI*GIQWLH Trigger: GTGAAGCCATTGTATCCCTCAAATAAAGACCAAAAG...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTCTCGATACTTTCGATaGAGTCTGAATTCTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMASRYFR*SLNSDP Trigger: AGGGTCAGAATTCAGACTTCATCGAAAGTATCGAGA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTTTGCATTAAAAGCGTaGTTCAGGGTGGCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTFALKA*FRVAIS Trigger: TGAAATGGCCACCCTGAAGCACGCTTTTAATGCAAA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTTTGCATTAAAAGCGTaGTTCAGGGTGGCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAFALKA*FRVAIS Trigger: TGAAATGGCCACCCTGAAGCACGCTTTTAATGCAAA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | TTAAATTCTGAGGCCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTTTTGCATTAAAAGCGTaGTTCAGGGTGGCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNSEAQAKNHPEGRILSPFALKA*FRVAIS Trigger: TGAAATGGCCACCCTGAAGCACGCTTTTAATGCAAA...AGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGGCCTCAGAATTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
||
| CDS-3UTR GCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCTCAGCCAGCTCTGTaGTGTAAACTTTTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQAQPAL*CKLLAL Trigger: CAATGCCAAAAGTTTACAGCACAGAGCTGGCTGAGC...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATAATTTTTGGAAGTTTTTaGCTTGGTGGCCTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIIFGSF*LGGLQE Trigger: TTCTTGGAGGCCACCAAGGCAAAAACTTCCAAAAAT...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAAGTTGTAGGGTTTGTTaGAGAACAGCTCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQSCRVC*RTAQGS Trigger: TGAGCCCTGAGCTGTTCTCCAACAAACCCTACAACT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAAAGCGTGCTTCAGGGTaGCCATTTCATATACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQKRASG*PFHIHS Trigger: GCTGTGTATATGAAATGGCCACCCTGAAGCACGCTT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTTTTTCTGCCTTCGCTaGTCTGGCTTTTGGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTFFCLR*SGFWSL Trigger: TAAAGACCAAAAGCCAGACCAGCGAAGGCAGAAAAA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226146.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGGTAATTCTTGGAACTaGCTCTTTGTACGACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAGNSWN*LFVRLW Trigger: CCATAGTCGTACAAAGAGCCAGTTCCAAGAATTACC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226146.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATCTTCGCAGAAGCCCATaGCAATGTAGAGCAGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: HETSFLSLVASITVVQFNLRRSP*QCRADR Trigger: ACGGTCTGCTCTACATTGTCATGGGCTTCTGCGAAG...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAGATATCACGTCAGTATTTaGTTCTTCCTTTCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PEFKSQQPHGGSQPFVMRYHVSI*FFLSGN Trigger: GTTTCCAGAAAGGAAGAATCAAATACTGACGTGATA...TCTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCCTTTTGGTCTTTATTTaGGGGATACAATGGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTLLVFI*GIQWLH Trigger: GTGAAGCCATTGTATCCCTCAAATAAAGACCAAAAG...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAACCTGCTCTAAGAGTTaGATCCCCAGGCCCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKTCSKS*IPRPWI Trigger: AATCCAGGGCCTGGGGATTCAACTCTTAGAGCAGGT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAAGAAGCTGCCCTTTCTaGTCCTTGAGCTTCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKRSCPF*SLSFRY Trigger: GTACCGGAAGCTCAAGGAGCAGAAAGGGCAGCTTCT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATTCTCATGTAAATACTaGAAGGCCATGGCGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQFSCKY*KAMAIW Trigger: CCAGATCGCCATGGCCTTGCAGTATTTACATGAGAA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | AATTCTGAGGCCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTTGCAGAATTCATGTCTTTTaGATTAAAAGCGTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSEAQAKNHPEGRILSPCRIHVF*IKSVLQ Trigger: CTGAAGCACGCTTTTAATGCAAAAGACATGAATTCT...GCAAGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGGCCTCAGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGATTTTTGGAAGTTTTTaGCTTGGTGGCCTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAIFGSF*LGGLQE Trigger: TTCTTGGAGGCCACCAAGGCAAAAACTTCCAAAAAT...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATGTTCATGTCTTGTTTaGCAGTGTGGCCTTCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQCSCLV*QCGLQD Trigger: GTCTTGAAGGCCACACTGGCAAACAAGACATGAACA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATATCTCTTGAGAAATACTaGACTGACTGTCTACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYISLEKY*TDCLLH Trigger: ATGAAGTAGACAGTCAGTGCAGTATTTCTCAAGAGA...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATATGGTTTCCATCATTTTaGTGTGTTGCTATGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIWFPSF*CVAMIS Trigger: GGATATCATAGCAACACAGCAAAATGATGGAAACCA...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATCCTCTTCTGCAACCTTaGCATGAAGCACCAGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HETSFLSLVASITVVQFNPLLQP*HEAPAC Trigger: ACACGCTGGTGCTTCATGGCAAGGTTGCAGAAGAGG...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAGGGTTCCACCTCTTCTaGAACCTTGCCATGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKGFHLF*NLAMKH Trigger: GTGCTTCATGGCAAGGTTGCAGAAGAGGTGGAACCC...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATGTGCTGTAAACTTTTaGCATTGGCGGCAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQCAVNF*HWRQLS Trigger: GGAAAGTTGCCGCCAATGCCAAAAGTTTACAGCACA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTTGATTCTTCCTTTCTaGAAACTACAGCAGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTLILPF*KLQQQQ Trigger: CTGTTGCTGCTGTAGTTTCCAGAAAGGAAGAATCAA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCAACTGGTCTGGCTTTTaGTCTTTATTTGAGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTNWSGF*SLFEGY Trigger: GTATCCCTCAAATAAAGACCAAAAGCCAGACCAGTT...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGGTAATTCTTGGAACTaGTCTGGCTTTTGGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAGNSWN*SGFWSL Trigger: TAAAGACCAAAAGCCAGACCAGTTCCAAGAATTACC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGGTAATTCTTGGAACTaGTCTGGCTTTTGGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTGNSWN*SGFWSL Trigger: TAAAGACCAAAAGCCAGACCAGTTCCAAGAATTACC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATCCTGGGTTTAGGACCTaGAGATCTTCACAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HETSFLSLVASITVVQFNPGFRT*RSSQLS Trigger: GGAGAGCTGTGAAGATCTCCAGGTCCTAAACCCAGG...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAGTGTGGCTGGGATCTTaGGTGGATGCTGTCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKVWLGS*VDAVLI Trigger: AATCAGGACAGCATCCACCCAAGATCCCAGCCACAC...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
||
| CDS-3UTR TCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATTCATTTCATTTGTATaGCTCTTCCCCTCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQFISFV*LFPSLE Trigger: TTCCAGGGAGGGGAAGAGTCATACAAATGAAATGAA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAGAAGAATTCATGTCTTTTaGATTAAAAGCGTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEFKSQQPHGGSQPFVMRRIHVF*IKSVLQ Trigger: CTGAAGCACGCTTTTAATGCAAAAGACATGAATTCT...TCTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTGGTTTCCATCATTTTaGTGTGTTGCTATGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTWFPSF*CVAMIS Trigger: GGATATCATAGCAACACAGCAAAATGATGGAAACCA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAACAGCAGCAACAGGCTTaGCTCTGGAGTCACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKQQQQA*LWSHSF Trigger: AAAACTGTGACTCCAGAGCCAAGCCTGTTGCTGCTG...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAGTCTCCTCCCTCCCATaGTTCTTTGTAGGTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKVSSLP*FFVGDN Trigger: ATTGTCACCTACAAAGAATCATGGGAGGGAGGAGAC...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAAGGAGATTTCCAGGCTaGTCACTGGACTTGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKRRFPG*SLDLVL Trigger: CAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAACTTTTGGTCTTTATTTaGGGGATACAATGGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQLLVFI*GIQWLH Trigger: GTGAAGCCATTGTATCCCTCAAATAAAGACCAAAAG...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGAGAATTCATGTCTTTTaGATTAAAAGCGTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQFFIVRGLQGDIKQRMARIHVF*IKSVLQ Trigger: CTGAAGCACGCTTTTAATGCAAAAGACATGAATTCT...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAAAGCGTGCTTCAGGGTaGCCATTTCATATACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKKRASG*PFHIHS Trigger: GCTGTGTATATGAAATGGCCACCCTGAAGCACGCTT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAAACTGGTCTGGCTTTTaGTCTTTATTTGAGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQNWSGF*SLFEGY Trigger: GTATCCCTCAAATAAAGACCAAAAGCCAGACCAGTT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 |
||
| CDS-3UTR CCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAGCCACAGGTCCACCTTaGTTTCCATCATTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKATGPP*FPSFCC Trigger: ACAGCAAAATGATGGAAACCAAGGTGGACCTGTGGC...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAATTGGTCTTCTTCCTGTaGTTTCAGTGGCTCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKLVFFL*FQWLNC Trigger: GCAGTTGAGCCACTGAAACCACAGGAAGAAGACCAA...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| 3UTR CAA 72 bp | TATGAAAACATATGTAAATTTAGGAACCACTCTCTTTaGCCCCATCTACCCAGCCAAGCTATCTGGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YENICKFRNHSL*PHLPSQAIWKG Trigger: TCCTTTCCAGATAGCTTGGCTGGGTAGATGGGGCAAAAGAGAGTGGTTCCTAAATTTACATATGTTTTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
||
| CDS-3UTR TCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATATCACGTCAGTATTTaGTTCTTCCTTTCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQYHVSI*FFLSGN Trigger: GTTTCCAGAAAGGAAGAATCAAATACTGACGTGATA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATTGTGATTCATCTGAGTaGTGCTGCAGTCAGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HETSFLSLVASITVVQFNCDSSE*CCSQKR Trigger: TCTCTTCTGACTGCAGCATCACTCAGATGAATCACA...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAATCATTTTGCTGTGTTaGTATGATATCCACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQIILLC*YDIHFP Trigger: GGGAAAGTGGATATCATAGCAACACAGCAAAATGAT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CCA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATGGTAATTCTTGGAACTaGCTCTTTGTACGACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HETSFLSLVASITVVQFNGNSWN*LFVRLW Trigger: CCATAGTCGTACAAAGAGCCAGTTCCAAGAATTACC...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
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| 3UTR CAA 72 bp | ACATATTTAAAATATGGGAACTCAGTTGACACTTTATaGTACATAAAGACAAACATCACTTGCGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TYLKYGNSVDTL*YIKTNITCGGW Trigger: CCAGCCCCCGCAAGTGATGTTTGTCTTTATGTACAATAAAGTGTCAACTGAGTTCCCATATTTTAAATATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATGTTTTCAGATCTCGATaGAGGATGTGTTTCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HETSFLSLVASITVVQFNVFRSR*RMCFSC Trigger: ACATGAGAAACACATCCTTCATCGAGATCTGAAAAC...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR TCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAACTTTTGGTCTTTATTTaGGGGATACAATGGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKLLVFI*GIQWLH Trigger: GTGAAGCCATTGTATCCCTCAAATAAAGACCAAAAG...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATATTTTTGGAAGTTTTTaGCTTGGTGGCCTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HETSFLSLVASITVVQFNIFGSF*LGGLQE Trigger: TTCTTGGAGGCCACCAAGGCAAAAACTTCCAAAAAT...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAATCTCTTGAGAAATACTaGACTGACTGTCTACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKSLEKY*TDCLLH Trigger: ATGAAGTAGACAGTCAGTGCAGTATTTCTCAAGAGA...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAATCATTTTGCTGTGTTaGTATGATATCCACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKIILLC*YDIHFP Trigger: GGGAAAGTGGATATCATAGCAACACAGCAAAATGAT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR GCA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAAGAATTCATGTCTTTTaGATTAAAAGCGTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKRIHVF*IKSVLQ Trigger: CTGAAGCACGCTTTTAATGCAAAAGACATGAATTCT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS GCA 90 bp | GCTGCCTCAGGATGCTCCGCACAGAGGGCCTCTCCTCAGGCCTTCTaGTCAGCATTGTTCTTATCAGCTCAGCCAGCTCTGTGCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AASGCSAQRASPQAF*SALFLSAQPALCCK Trigger: TTTACAGCACAGAGCTGGCTGAGCTGATAAGAACAATGCTGAGCAGAAGGCCTGAGGAGAGGCCCTCTGTGCGGAGCATCCTGAGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000226833.2 ENSMUST00000228328.2 |
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| CDS TCA 90 bp | AAATACTGCAAGGCCATGGCGATCTGGACAAACCACTCCACCACCTaGCTCTCAGGCAGAAGCTGCCCTTTCTGCTCCTTGAGCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KYCKAMAIWTNHSTT*LSGRSCPFCSLSFR Trigger: CCGGAAGCTCAAGGAGCAGAAAGGGCAGCTTCTGCCTGAGAGTCAGGTGGTGGAGTGGTTTGTCCAGATCGCCATGGCCTTGCAGTATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000226833.2 ENSMUST00000228328.2 |
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| CDS CCA 90 bp | TCACCAGTTCACTCCCTTCCCCATCACCACCATCAGAGGACCGTCTaGGAAGGAGATTTCCAGGCTGATCACTGGACTTGGTATTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPVHSLPHHHHQRTV*EGDFQADHWTWYCP Trigger: AGGGCAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCTTCCCAGACGGTCCTCTGATGGTGGTGATGGGGAAGGGAGTGAACTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTGCCCTTTCTGCTCCTaGAGCTTCCGGTACAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGCPFCS*SFRYRS Trigger: TGATCTGTACCGGAAGCTCAAGGAGCAGAAAGGGCA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTACAGCAGCAACAGGCTaGGCTCTGGAGTCACAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGTAATG*ALESQF Trigger: AAACTGTGACTCCAGAGCCAAGCCTGTTGCTGCTGT...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTCACTGGACTTGGTATaGCCCTGTAGCCTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGSLDLV*PCSLSF Trigger: GAAGGAGAGGCTACAGGGCAATACCAAGTCCAGTGA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS TCA 90 bp | TCTTCTTCCTGTGGTTTCAGTGGCTCAACTGCACTTGGAGTTCTCTaGACTGCAGGGCCTGAGGGCAGCATCTCCTCCTGTGACTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSCGFSGSTALGVL*TAGPEGSISSCDCF Trigger: AAAGCAGTCACAGGAGGAGATGCTGCCCTCAGGCCCTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCACTGAAACCACAGGAAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS GCA 90 bp | TATGATACCCGTAGGCAGCTCCGTACAGTGGGGTTCCACCTCTTCTaGAACCTTGCCATGAAGCACCAGCGTGTCTCGATACTTTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: YDTRRQLRTVGFHLF*NLAMKHQRVSILSM Trigger: CATCGAAAGTATCGAGACACGCTGGTGCTTCATGGCAAGGTTGCAGAAGAGGTGGAACCCCACTGTACGGAGCTGCCTACGGGTATCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS TCA 90 bp | TCAGCCTCTTCTCCTTTTCCCTCGGGAGTGTGTGATTCATCTGAGTaGTGCTGCAGTCAGAAGAGAATCGTTGGGCAGGGATGGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SASSPFPSGVCDSSE*CCSQKRIVGQGWVG Trigger: ACCAACCCATCCCTGCCCAACGATTCTCTTCTGACTGCAGCATCACTCAGATGAATCACACACTCCCGAGGGAAAAGGAGAAGAGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTTGGAAGTTTTTGCCTaGGTGGCCTCCAAGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGLEVFA*VASKNK Trigger: CTTGTTCTTGGAGGCCACCAAGGCAAAAACTTCCAA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CCA 90 bp | CAGAGGACCGTCTGGGAAGGAGATTTCCAGGCTGATCACTGGACTTaGTATTGCCCTGTAGCCTCTCCTTCTCTTGAGAAATACTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: QRTVWEGDFQADHWT*YCPVASPSLEKYCT Trigger: AGTGCAGTATTTCTCAAGAGAAGGAGAGGCTACAGGGCAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCTTCCCAGACGGTCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CCA 90 bp | CACCATCAGAGGACCGTCTGGGAAGGAGATTTCCAGGCTGATCACTaGACTTGGTATTGCCCTGTAGCCTCTCCTTCTCTTGAGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: HHQRTVWEGDFQADH*TWYCPVASPSLEKY Trigger: GTATTTCTCAAGAGAAGGAGAGGCTACAGGGCAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCTTCCCAGACGGTCCTCTGATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CCA 90 bp | CTGCCTTCGCTGCCGGGACAAAGAAGGTTCAGACATAGAGCTGTGTaGCTGGGATCTTGGGTGGATGCTGTCCTGATTTTCTATAATACC | + |
|
Preference number: 5 (lower is better) Translates to: LPSLPGQRRFRHRAV*LGSWVDAVLIFYNT Trigger: GGTATTATAGAAAATCAGGACAGCATCCACCCAAGATCCCAGCCACACAGCTCTATGTCTGAACCTTCTTTGTCCCGGCAGCGAAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCGCCTTCTGCTCAGCATaGTTCTTATCAGCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: THRLWFSGARITSVNYCIAFCSA*FLSAQP Trigger: TGGCTGAGCTGATAAGAACAATGCTGAGCAGAAGGC...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTTGTTCATGTCTTGTTaGCCAGTGTGGCCTTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGLFMSC*PVWPSR Trigger: TCTTGAAGGCCACACTGGCAAACAAGACATGAACAA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTAGTATTGTTCATGTCTaGTTTGCCAGTGTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGSIVHV*FASVAF Trigger: GAAGGCCACACTGGCAAACAAGACATGAACAATACT...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAGAAGCGGCATCCACGTGTaGTGGTTGGCTCTCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PEFKSQQPHGGSQPFVMRSGIHV*WLALLN Trigger: GTTCAGGAGAGCCAACCACAACACGTGGATGCCGCT...TCTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS GCA 90 bp | ACCGTCTGGGAAGGAGATTTCCAGGCTGATCACTGGACTTGGTATTaGCCTGTAGCCTCTCCTTCTCTTGAGAAATACTGCACTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TVWEGDFQADHWTWY*PVASPSLEKYCTDC Trigger: ACAGTCAGTGCAGTATTTCTCAAGAGAAGGAGAGGCTACAGGGCAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCTTCCCAGACGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | GAACCACTCTCTTTTGCCCCATCTACCCAGCCAAGCTATCTGGAAAGGAAGTGTGCCTTCTGCTCAGCATaGTTCTTATCAGCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPLSFAPSTQPSYLERKCAFCSA*FLSAQP Trigger: TGGCTGAGCTGATAAGAACAATGCTGAGCAGAAGGC...ACACTTCCTTTCCAGATAGCTTGGCTGGGTAGATGGGGCAAAAGAGAGTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCAGCGGCATCCACGTGTaGTGGTTGGCTCTCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTSGIHV*WLALLN Trigger: GTTCAGGAGAGCCAACCACAACACGTGGATGCCGCT...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS TCA 90 bp | AGAGCCCTCAGAAGAGCGTGGCTGGTAGTGTATCACGTCAGTATTTaGTTCTTCCTTTCTGGAAACTACAGCAGCAACAGGCTTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RALRRAWLVVYHVSI*FFLSGNYSSNRLGS Trigger: AGAGCCAAGCCTGTTGCTGCTGTAGTTTCCAGAAAGGAAGAATCAAATACTGACGTGATACACTACCAGCCACGCTCTTCTGAGGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATATGCCCTTTCTGCTCCTaGAGCTTCCGGTACAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: LMPSSGVSEDSSSVLIYICPFCS*SFRYRS Trigger: TGATCTGTACCGGAAGCTCAAGGAGCAGAAAGGGCA...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAGAACAGCAGCAACAGGCTaGGCTCTGGAGTCACAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PEFKSQQPHGGSQPFVMRTAATG*ALESQF Trigger: AAACTGTGACTCCAGAGCCAAGCCTGTTGCTGCTGT...TCTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTGCTTTTGGTCTTTATTaGAGGGATACAATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGAFGLY*RDTMAS Trigger: TGAAGCCATTGTATCCCTCAAATAAAGACCAAAAGC...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTGTGTGGCTGGGATCTaGGGTGGATGCTGTCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMACVAGI*GGCCPD Trigger: ATCAGGACAGCATCCACCCAAGATCCCAGCCACACA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTGCCCTTTCTGCTCCTaGAGCTTCCGGTACAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTCPFCS*SFRYRS Trigger: TGATCTGTACCGGAAGCTCAAGGAGCAGAAAGGGCA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAAGCGGCATCCACGTGTaGTGGTTGGCTCTCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQSGIHV*WLALLN Trigger: GTTCAGGAGAGCCAACCACAACACGTGGATGCCGCT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTCACTGGACTTGGTATaGCCCTGTAGCCTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTSLDLV*PCSLSF Trigger: GAAGGAGAGGCTACAGGGCAATACCAAGTCCAGTGA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | AAGGATGGCGGTGACCAGCCTCTGAATGACTGGAACAGGGTTGGTGATGGTGGTTTGGTTTCCATCATTTaGCTGTGTTGCTATGATATC | + |
|
Preference number: 5 (lower is better) Translates to: KDGGDQPLNDWNRVGDGGLVSII*LCCYDI Trigger: GATATCATAGCAACACAGCAAAATGATGGAAACCAA...ACCACCATCACCAACCCTGTTCCAGTCATTCAGAGGCTGGTCACCGCCATCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGGCTCAACTGCACTaGGAGTTCTCTGAACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAVAQLH*EFSELQ Trigger: CTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCAC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGTGGCTCAACTGCACTaGGAGTTCTCTGAACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTVAQLH*EFSELQ Trigger: CTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCAC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CCA 90 bp | AGCGTGGCTGGTAGTGTATCACGTCAGTATTTGATTCTTCCTTTCTaGAAACTACAGCAGCAACAGGCTTGGCTCTGGAGTCACAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVAGSVSRQYLILPF*KLQQQQAWLWSHSF Trigger: AAAACTGTGACTCCAGAGCCAAGCCTGTTGCTGCTGTAGTTTCCAGAAAGGAAGAATCAAATACTGACGTGATACACTACCAGCCACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CCA 90 bp | CCGGGACAAAGAAGGTTCAGACATAGAGCTGTGTGGCTGGGATCTTaGGTGGATGCTGTCCTGATTTTCTATAATACCAGTAACTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PGQRRFRHRAVWLGS*VDAVLIFYNTSNLI Trigger: GATCAAGTTACTGGTATTATAGAAAATCAGGACAGCATCCACCCAAGATCCCAGCCACACAGCTCTATGTCTGAACCTTCTTTGTCCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | ATCACCCAGAGGGTAGAATTTTGTCTCCTTGCATACTCTAGTCATGCAGTTTTCTGCCCTTTCTGCTCCTaGAGCTTCCGGTACAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: ITQRVEFCLLAYSSHAVFCPFCS*SFRYRS Trigger: TGATCTGTACCGGAAGCTCAAGGAGCAGAAAGGGCA...GAAAACTGCATGACTAGAGTATGCAAGGAGACAAAATTCTACCCTCTGGGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
||
| CDS-3UTR CAA 90 bp | AATTCTGAGGCCCAGGCCAAAAATCACCCAGAGGGTAGAATTTTGTCTCCTTGCCCTAGGTCCCCCACTTaGATGATGTTTGTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NSEAQAKNHPEGRILSPCPRSPT*MMFVLV Trigger: AACAAGAACAAACATCATCAAAGTGGGGGACCTAGG...GCAAGGAGACAAAATTCTACCCTCTGGGTGATTTTTGGCCTGGGCCTCAGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000226833.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGCCTTCTGCTCAGCATaGTTCTTATCAGCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTAFCSA*FLSAQP Trigger: TGGCTGAGCTGATAAGAACAATGCTGAGCAGAAGGC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGCCTTCTGCTCAGCATaGTTCTTATCAGCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAAFCSA*FLSAQP Trigger: TGGCTGAGCTGATAAGAACAATGCTGAGCAGAAGGC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATATTGGAAGTTTTTGCCTaGGTGGCCTCCAAGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LMPSSGVSEDSSSVLIYILEVFA*VASKNK Trigger: CTTGTTCTTGGAGGCCACCAAGGCAAAAACTTCCAA...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCGCTTTTGGTCTTTATTaGAGGGATACAATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: THRLWFSGARITSVNYCIAFGLY*RDTMAS Trigger: TGAAGCCATTGTATCCCTCAAATAAAGACCAAAAGC...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCAGCCACAGGTCCACCTaGGTTTCCATCATTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTSHRST*VSIILL Trigger: CAGCAAAATGATGGAAACCAAGGTGGACCTGTGGCT...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | ACCCACCGCCTCTGGTTCTCAGGTGCCAGGATTACAAGTGTGAACTATTGCATCTATAATACCAGTAACTaGATCCTGGTCTGGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: THRLWFSGARITSVNYCIYNTSN*ILVWLL Trigger: CAAAAGCCAGACCAGGATCAAGTTACTGGTATTATA...GATGCAATAGTTCACACTTGTAATCCTGGCACCTGAGAACCAGAGGCGGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATACCTAGGTCCCCCACTTaGATGATGTTTGTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIPRSPT*MMFVLV Trigger: AACAAGAACAAACATCATCAAAGTGGGGGACCTAGG...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTTGGAAGTTTTTGCCTaGGTGGCCTCCAAGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTLEVFA*VASKNK Trigger: CTTGTTCTTGGAGGCCACCAAGGCAAAAACTTCCAA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAACAGCAGCAACAGGCTaGGCTCTGGAGTCACAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQTAATG*ALESQF Trigger: AAACTGTGACTCCAGAGCCAAGCCTGTTGCTGCTGT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATCACTGGACTTGGTATaGCCCTGTAGCCTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQSLDLV*PCSLSF Trigger: GAAGGAGAGGCTACAGGGCAATACCAAGTCCAGTGA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGTGGCTCAACTGCACTaGGAGTTCTCTGAACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQVAQLH*EFSELQ Trigger: CTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCAC...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCCCTAGGTCCCCCACTTaGATGATGTTTGTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTPRSPT*MMFVLV Trigger: AACAAGAACAAACATCATCAAAGTGGGGGACCTAGG...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGCCTAGGTCCCCCACTTaGATGATGTTTGTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAPRSPT*MMFVLV Trigger: AACAAGAACAAACATCATCAAAGTGGGGGACCTAGG...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTTGTTCATGTCTTGTTaGCCAGTGTGGCCTTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTLFMSC*PVWPSR Trigger: TCTTGAAGGCCACACTGGCAAACAAGACATGAACAA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGAGTATTGTTCATGTCTaGTTTGCCAGTGTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMASIVHV*FASVAF Trigger: GAAGGCCACACTGGCAAACAAGACATGAACAATACT...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCCATGACTCCCCAGTATaGTTCATGTCTTGTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTHDSPV*FMSCLP Trigger: TGGCAAACAAGACATGAACAATACTGGGGAGTCATG...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGCATGACTCCCCAGTATaGTTCATGTCTTGTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAHDSPV*FMSCLP Trigger: TGGCAAACAAGACATGAACAATACTGGGGAGTCATG...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAAGCGGCATCCACGTGTaGTGGTTGGCTCTCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKSGIHV*WLALLN Trigger: GTTCAGGAGAGCCAACCACAACACGTGGATGCCGCT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATTGGAAGTTTTTGCCTaGGTGGCCTCCAAGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQLEVFA*VASKNK Trigger: CTTGTTCTTGGAGGCCACCAAGGCAAAAACTTCCAA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGTATTTTTGGAAGTTTTaGCCTTGGTGGCCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAYFWKF*PWWPPR Trigger: TCTTGGAGGCCACCAAGGCAAAAACTTCCAAAAATA...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCTATTTTTGGAAGTTTTaGCCTTGGTGGCCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTYFWKF*PWWPPR Trigger: TCTTGGAGGCCACCAAGGCAAAAACTTCCAAAAATA...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTCCACTGGTTTCTCTaGGGACAAACATTTATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAVHWFL*GQTFIF Trigger: GAAGATAAATGTTTGTCCCAAGAGAAACCAGTGGAC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGAGTCTTTCATTTCATTaGTATGACTCTTCCCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMASLSFH*YDSSPP Trigger: GGGAGGGGAAGAGTCATACAAATGAAATGAAAGACT...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTCCAGTGTACTCATATACATAGTATCACGTCAGTATTaGATTCTTCCTTTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LMPSSGVSEDSSSVLIYIVSRQY*ILPFWK Trigger: TTTCCAGAAAGGAAGAATCAAATACTGACGTGATAC...TATGTATATGAGTACACTGGAGCTGTCTTCAGACACACCAGAAGAGGGCATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGCTTTTGGTCTTTATTaGAGGGATACAATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTAFGLY*RDTMAS Trigger: TGAAGCCATTGTATCCCTCAAATAAAGACCAAAAGC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAGTGGCTCAACTGCACTaGGAGTTCTCTGAACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKVAQLH*EFSELQ Trigger: CTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCAC...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCCGGAGGTTCAGCTTTTaGATGACATACAGTATAATA | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTRRFSF*MTYSII Trigger: TATTATACTGTATGTCATCAAAAAGCTGAACCTCCG...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050171.10 |
||
| CDS-3UTR CAA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAGCCTTCTGCTCAGCATaGTTCTTATCAGCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKAFCSA*FLSAQP Trigger: TGGCTGAGCTGATAAGAACAATGCTGAGCAGAAGGC...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATATTTTTGGAAGTTTTaGCCTTGGTGGCCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQYFWKF*PWWPPR Trigger: TCTTGGAGGCCACCAAGGCAAAAACTTCCAAAAATA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTGACCGTATCACGTCAGTATTaGATTCTTCCTTTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FFIVRGLQGDIKQRMAVTVSRQY*ILPFWK Trigger: TTTCCAGAAAGGAAGAATCAAATACTGACGTGATAC...GGTCACCGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGCAAAGGATGGCGGTATCACGTCAGTATTaGATTCTTCCTTTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIVRGLQGDIKQRMAVSRQY*ILPFWK Trigger: TTTCCAGAAAGGAAGAATCAAATACTGACGTGATAC...CGCCATCCTTTGCTTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAGTCCACTGGTTTCTCTaGGGACAAACATTTATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQVHWFL*GQTFIF Trigger: GAAGATAAATGTTTGTCCCAAGAGAAACCAGTGGAC...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS-3UTR CAA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATAGCCACAGGTCCACCTaGGTTTCCATCATTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HETSFLSLVASITVVQFNSHRST*VSIILL Trigger: CAGCAAAATGATGGAAACCAAGGTGGACCTGTGGCT...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAAAGTCTTTCATTTCATTaGTATGACTCTTCCCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQSLSFH*YDSSPP Trigger: GGGAGGGGAAGAGTCATACAAATGAAATGAAAGACT...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATTTGTTCATGTCTTGTTaGCCAGTGTGGCCTTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HETSFLSLVASITVVQFNLFMSC*PVWPSR Trigger: TCTTGAAGGCCACACTGGCAAACAAGACATGAACAA...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | GCATTAGTCTGCTCTCCAGTTCTTTATAGTAAGAGGACTCCAAGGAGATATCAATTGGTTTCCATCATTTaGCTGTGTTGCTATGATATC | + |
|
Preference number: 5 (lower is better) Translates to: ALVCSPVLYSKRTPRRYQLVSII*LCCYDI Trigger: GATATCATAGCAACACAGCAAAATGATGGAAACCAA...TTGATATCTCCTTGGAGTCCTCTTACTATAAAGAACTGGAGAGCAGACTAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAAAGTCTTTCATTTCATTaGTATGACTCTTCCCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKSLSFH*YDSSPP Trigger: GGGAGGGGAAGAGTCATACAAATGAAATGAAAGACT...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CATGAGACATCGTTCCTTTCTCTTGTTGCTTCTATCACTGTAGTACAATTTAATGCTTTTGGTCTTTATTaGAGGGATACAATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HETSFLSLVASITVVQFNAFGLY*RDTMAS Trigger: TGAAGCCATTGTATCCCTCAAATAAAGACCAAAAGC...ATTAAATTGTACTACAGTGATAGAAGCAACAAGAGAAAGGAACGATGTCTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS-3UTR CAA 90 bp | CACTCCCTGGGCCAAACATATTCAAACCACCACAACTTGTATTTTATTTATAAATTGGTTTCCATCATTTaGCTGTGTTGCTATGATATC | + |
|
Preference number: 5 (lower is better) Translates to: HSLGQTYSNHHNLYFIYKLVSII*LCCYDI Trigger: GATATCATAGCAACACAGCAAAATGATGGAAACCAA...TTTATAAATAAAATACAAGTTGTGGTGGTTTGAATATGTTTGGCCCAGGGAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS GCA 72 bp | GATGCTTCACGAGCGTCACCTCCCCGTAACTACCCCTaGCCACGACCCGCATGTAGCAGTATGCGGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DASRASPPRNYP*PRPACSSMRPG Trigger: CCCAGGCCGCATACTGCTACATGCGGGTCGTGGGCAGGGGTAGTTACGGGGAGGTGACGCTCGTGAAGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226551.2 ENSMUST00000226833.2 ENSMUST00000228328.2 |
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| CDS TCA 72 bp | GCTTCCGGTACAGATCACCTCCTTCGCAGAAGCCCATaGCAATGTAGAGCAGACCGTCTCCTCCCTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ASGTDHLLRRSP*QCRADRLLPPM Trigger: CATGGGAGGGAGGAGACGGTCTGCTCTACATTGTCATGGGCTTCTGCGAAGGAGGTGATCTGTACCGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000226833.2 ENSMUST00000228328.2 |
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| CDS GCA 72 bp | CGTAGGCAGCTCCGTACAGTGGGGTTCCACCTCTTCTaGAACCTTGCCATGAAGCACCAGCGTGTCTCGATA | + |
|
Preference number: 6 (lower is better) Translates to: RRQLRTVGFHLF*NLAMKHQRVSI Trigger: TATCGAGACACGCTGGTGCTTCATGGCAAGGTTGCAGAAGAGGTGGAACCCCACTGTACGGAGCTGCCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CAA 90 bp | GGATGGGTTGGTCTTCTTCCTGTGGTTTCAGTGGCTCAACTGCACTaGGAGTTCTCTGAACTGCAGGGCCTGAGGGCAGCATCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GWVGLLPVVSVAQLH*EFSELQGLRAASPP Trigger: AGGAGGAGATGCTGCCCTCAGGCCCTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCACTGAAACCACAGGAAGAAGACCAACCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS TCA 72 bp | TGTGGTTTCAGTGGCTCAACTGCACTTGGAGTTCTCTaGACTGCAGGGCCTGAGGGCAGCATCTCCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGFSGSTALGVL*TAGPEGSISSC Trigger: ACAGGAGGAGATGCTGCCCTCAGGCCCTGCAGTTCAGAGAACTCCAAGTGCAGTTGAGCCACTGAAACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CAA 72 bp | GCACTGACTGTCTACTTCATCAGCGGCATCCACGTGTaGTGGTTGGCTCTCCTGAACTACACCAGCGTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: ALTVYFISGIHV*WLALLNYTSVR Trigger: GCGAACGCTGGTGTAGTTCAGGAGAGCCAACCACAACACGTGGATGCCGCTGATGAAGTAGACAGTCAGTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CAA 72 bp | CGCTCTCGGCTGGAGGCATTTCGGAGGTTCAGCTTTTaGATGACATACTGCTTGCCGTCTCGCCGATGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSRLEAFRRFSF*MTYCLPSRRCF Trigger: GAAGCATCGGCGAGACGGCAAGCAGTATGTCATCAAAAAGCTGAACCTCCGAAATGCCTCCAGCCGAGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226551.2 ENSMUST00000226833.2 ENSMUST00000228328.2 |
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| CDS GCA 72 bp | GCTCCGTACAGTGGGGTTCCACCTCTTCTGCAACCTTaGCATGAAGCACCAGCGTGTCTCGATACTTTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: APYSGVPPLLQP*HEAPACLDTFD Trigger: ATCGAAAGTATCGAGACACGCTGGTGCTTCATGGCAAGGTTGCAGAAGAGGTGGAACCCCACTGTACGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS GCA 72 bp | GAGGCATTTCGGAGGTTCAGCTTTTTGATGACATACTaGTTGCCGTCTCGCCGATGCTTCACGAGCGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: EAFRRFSFLMTY*LPSRRCFTSVT Trigger: GGTGACGCTCGTGAAGCATCGGCGAGACGGCAAGCAGTATGTCATCAAAAAGCTGAACCTCCGAAATGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226551.2 ENSMUST00000226833.2 ENSMUST00000228328.2 |
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| CDS CCA 72 bp | AGGACCGTCTGGGAAGGAGATTTCCAGGCTGATCACTaGACTTGGTATTGCCCTGTAGCCTCTCCTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RTVWEGDFQADH*TWYCPVASPSL Trigger: AAGAGAAGGAGAGGCTACAGGGCAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCTTCCCAGACGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CCA 72 bp | CTGCCGGGACAAAGAAGGTTCAGACATAGAGCTGTGTaGCTGGGATCTTGGGTGGATGCTGTCCTGATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPGQRRFRHRAV*LGSWVDAVLIF Trigger: GAAAATCAGGACAGCATCCACCCAAGATCCCAGCCACACAGCTCTATGTCTGAACCTTCTTTGTCCCGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
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| CDS CAA 90 bp | CTGAGTGATGCTGCAGTCAGAAGAGAATCGTTGGGCAGGGATGGGTaGGTCTTCTTCCTGTGGTTTCAGTGGCTCAACTGCACTTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSDAAVRRESLGRDG*VFFLWFQWLNCTWS Trigger: ACTCCAAGTGCAGTTGAGCCACTGAAACCACAGGAAGAAGACCAACCCATCCCTGCCCAACGATTCTCTTCTGACTGCAGCATCACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CAA 90 bp | GCAGCTCGACGCTCTCGGCTGGAGGCATTTCGGAGGTTCAGCTTTTaGATGACATACAGTATAATACATCGAAGACGAGGCAGGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AARRSRLEAFRRFSF*MTYSIIHRRRGRRM Trigger: CATCCTCCTGCCTCGTCTTCGATGTATTATACTGTATGTCATCAAAAAGCTGAACCTCCGAAATGCCTCCAGCCGAGAGCGTCGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050171.10 |
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| CDS TCA 72 bp | GTCTTGTTTGCCAGTGTGGCCTTCAAGACTAGCCGGTaGTCTCAAGGGACCAATGTCCACTGGTTTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLFASVAFKTSR*SQGTNVHWFLL Trigger: CAAGAGAAACCAGTGGACATTGGTCCCTTGAGATCACCGGCTAGTCTTGAAGGCCACACTGGCAAACAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CAA 72 bp | GTGGCACATGACTCCCCAGTATTGTTCATGTCTTGTTaGCCAGTGTGGCCTTCAAGACTAGCCGGTGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: VAHDSPVLFMSC*PVWPSRLAGDL Trigger: GAGATCACCGGCTAGTCTTGAAGGCCACACTGGCAAACAAGACATGAACAATACTGGGGAGTCATGTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CAA 90 bp | CAGAGCCCTCAGAAGAGCGTGGCTGGTAGTGTATCACGTCAGTATTaGATTCTTCCTTTCTGGAAACTACAGCAGCAACAGGCTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QSPQKSVAGSVSRQY*ILPFWKLQQQQAWL Trigger: GAGCCAAGCCTGTTGCTGCTGTAGTTTCCAGAAAGGAAGAATCAAATACTGACGTGATACACTACCAGCCACGCTCTTCTGAGGGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CAA 90 bp | TGGCTGATAATGGTCGATCCTTTGCTGATGCTGTTGAGCTGGTCCTaGAACTGTTTACACACCCAGCCACAGGTCCACCTTGGTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WLIMVDPLLMLLSWS*NCLHTQPQVHLGFH Trigger: ATGGAAACCAAGGTGGACCTGTGGCTGGGTGTGTAAACAGTTCAAGGACCAGCTCAACAGCATCAGCAAAGGATCGACCATTATCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CCA 72 bp | GTCTGGGAAGGAGATTTCCAGGCTGATCACTGGACTTaGTATTGCCCTGTAGCCTCTCCTTCTCTTGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VWEGDFQADHWT*YCPVASPSLEK Trigger: TTTCTCAAGAGAAGGAGAGGCTACAGGGCAATACCAAGTCCAGTGATCAGCCTGGAAATCTCCTTCCCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CCA 72 bp | CTGATAATGGTCGATCCTTTGCTGATGCTGTTGAGCTaGTCCTTGAACTGTTTACACACCCAGCCACAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LIMVDPLLMLLS*SLNCLHTQPQV Trigger: GACCTGTGGCTGGGTGTGTAAACAGTTCAAGGACCAGCTCAACAGCATCAGCAAAGGATCGACCATTATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS TCA 72 bp | CATGACAATGTAGAGCAGACCGTCTCCTCCCTCCCATaGTTCTTTGTAGGTGACAATGTTGGGGTGCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: HDNVEQTVSSLP*FFVGDNVGVLQ Trigger: TTGAAGCACCCCAACATTGTCACCTACAAAGAATCATGGGAGGGAGGAGACGGTCTGCTCTACATTGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 ENSMUST00000226833.2 ENSMUST00000228328.2 |
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| CDS TCA 72 bp | GAAGCACCAGCGTGTCTCGATACTTTCGATGAAGTCTaGATTCTGACCCTGGGTTTAGGACCTGGAGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: EAPACLDTFDEV*ILTLGLGPGDL Trigger: AAGATCTCCAGGTCCTAAACCCAGGGTCAGAATTCAGACTTCATCGAAAGTATCGAGACACGCTGGTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS GCA 72 bp | TATTGCCCTGTAGCCTCTCCTTCTCTTGAGAAATACTaGACTGACTGTCTACTTCATCAGCGGCATCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: YCPVASPSLEKY*TDCLLHQRHPR Trigger: ACGTGGATGCCGCTGATGAAGTAGACAGTCAGTGCAGTATTTCTCAAGAGAAGGAGAGGCTACAGGGCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS CAA 72 bp | CGCTCTCGGCTGGAGGCATTTCGGAGGTTCAGCTTTTaGATGACATACAGTATAATACATCGAAGACGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSRLEAFRRFSF*MTYSIIHRRRG Trigger: GCCTCGTCTTCGATGTATTATACTGTATGTCATCAAAAAGCTGAACCTCCGAAATGCCTCCAGCCGAGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050171.10 |
||
| CDS CCA 72 bp | AAGCCCAAACATCCGACTTATAGTTGTAGGGTTTGTTaGAGAACAGCTCAGGGCTCATGTAATAGGGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KPKHPTYSCRVC*RTAQGSCNRVC Trigger: GCACACCCTATTACATGAGCCCTGAGCTGTTCTCCAACAAACCCTACAACTATAAGTCGGATGTTTGGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000226833.2 ENSMUST00000228328.2 |
||
| CDS TCA 72 bp | AGAAGAGCGTGGCTGGTAGTGTATCACGTCAGTATTTaGTTCTTCCTTTCTGGAAACTACAGCAGCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRAWLVVYHVSI*FFLSGNYSSNR Trigger: CCTGTTGCTGCTGTAGTTTCCAGAAAGGAAGAATCAAATACTGACGTGATACACTACCAGCCACGCTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS CCA 72 bp | GGTAGTGTATCACGTCAGTATTTGATTCTTCCTTTCTaGAAACTACAGCAGCAACAGGCTTGGCTCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSVSRQYLILPF*KLQQQQAWLWS Trigger: ACTCCAGAGCCAAGCCTGTTGCTGCTGTAGTTTCCAGAAAGGAAGAATCAAATACTGACGTGATACACTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS CCA 72 bp | CTTGAACTGTTTACACACCCAGCCACAGGTCCACCTTaGTTTCCATCATTTTGCTGTGTTGCTATGATATCC | + |
|
Preference number: 6 (lower is better) Translates to: LELFTHPATGPP*FPSFCCVAMIS Trigger: GGATATCATAGCAACACAGCAAAATGATGGAAACCAAGGTGGACCTGTGGCTGGGTGTGTAAACAGTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
||
| CDS CCA 72 bp | AGAAGGTTCAGACATAGAGCTGTGTGGCTGGGATCTTaGGTGGATGCTGTCCTGATTTTCTATAATACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RRFRHRAVWLGS*VDAVLIFYNTS Trigger: ACTGGTATTATAGAAAATCAGGACAGCATCCACCCAAGATCCCAGCCACACAGCTCTATGTCTGAACCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
||
| CDS CAA 72 bp | CAGAAGAGCGTGGCTGGTAGTGTATCACGTCAGTATTaGATTCTTCCTTTCTGGAAACTACAGCAGCAACAG | + |
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Preference number: 6 (lower is better) Translates to: QKSVAGSVSRQY*ILPFWKLQQQQ Trigger: CTGTTGCTGCTGTAGTTTCCAGAAAGGAAGAATCAAATACTGACGTGATACACTACCAGCCACGCTCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS TCA 72 bp | TCTTCACAGCTCTCCTTAGCTTCCAGCCTCAGAGTCTaGGTCATCAGCTGTACCAAGTCTTTCATTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: SSQLSLASSLRV*VISCTKSFISF Trigger: AAATGAAATGAAAGACTTGGTACAGCTGATGACTCAGACTCTGAGGCTGGAAGCTAAGGAGAGCTGTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050171.10 ENSMUST00000226146.2 ENSMUST00000226551.2 ENSMUST00000228328.2 |
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| CDS TCA 72 bp | AGTAACTTGATCCTGGTCTGGCTTTTGGTCTTTATTTaGGGGATACAATGGCTTCACCAGTTCACTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SNLILVWLLVFI*GIQWLHQFTPF Trigger: GAAGGGAGTGAACTGGTGAAGCCATTGTATCCCTCAAATAAAGACCAAAAGCCAGACCAGGATCAAGTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228328.2 |
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| CDS CAA 72 bp | GTAATTCTTGGAACTGGTCTGGCTTTTGGTCTTTATTaGAGGGATACAATGGCTTCACCAGTTCACTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: VILGTGLAFGLY*RDTMASPVHSL Trigger: AAGGGAGTGAACTGGTGAAGCCATTGTATCCCTCAAATAAAGACCAAAAGCCAGACCAGTTCCAAGAATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050171.10 ENSMUST00000226551.2 |
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