Pregenerated sensors for NEK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031478Ensembl transcript IDs: ENSMUST00000033865.16, ENSMUST00000110730.10, ENSMUST00000178324.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCGCAAGGGTTCTGGATTaGTTTGTAAACTTGCGATAT | + |
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Preference number: 2 (lower is better) Translates to: DSCNCCRECSYEVGVVTLARVLD*FVNLRY Trigger: ATATCGCAAGTTTACAAAGCAATCCAGAACCCTTGC...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGGCAAGGGTTCTGGATTaGTTTGTAAACTTGCGATAT | + |
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Preference number: 2 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVARVLD*FVNLRY Trigger: ATATCGCAAGTTTACAAAGCAATCCAGAACCCTTGC...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| 3UTR CCA 72 bp | AAGGAGTTAAGTCATTTCCTAGTGTCACACACATGGTaGCCGGCAGACGAGCATGGCATCTCCGTTCTGTCG | + |
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Preference number: 3 (lower is better) Translates to: KELSHFLVSHTW*PADEHGISVLS Trigger: CGACAGAACGGAGATGCCATGCTCGTCTGCCGGCCACCATGTGTGTGACACTAGGAAATGACTTAACTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| 3UTR CCA 72 bp | TCAAAGGAGTTAAGTCATTTCCTAGTGTCACACACATaGTGGCCGGCAGACGAGCATGGCATCTCCGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SKELSHFLVSHT*WPADEHGISVL Trigger: CAGAACGGAGATGCCATGCTCGTCTGCCGGCCACCATGTGTGTGACACTAGGAAATGACTTAACTCCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCGCAAGGGTTCTGGATaGCTTTGTAAACTTGCGATA | + |
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Preference number: 3 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVRKGSG*LCKLAI Trigger: TATCGCAAGTTTACAAAGCAATCCAGAACCCTTGCG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCCCTCAGGGGGCTCTCTaGCCCACTGCCTTCGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLPQGAL*PTAFGH Trigger: ATGCCCGAAGGCAGTGGGTCAGAGAGCCCCCTGAGG...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTTGCAGAGCAGGGTTGTaGCGGAGGGGCGGTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSCRAGL*RRGGGK Trigger: CTTCCCACCGCCCCTCCGCCACAACCCTGCTCTGCA...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTTCCCACCACGGCCTGTaGGGACTTGCCGGACTGGTA | + |
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Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSSHHGL*GLAGLV Trigger: TACCAGTCCGGCAAGTCCTCACAGGCCGTGGTGGGA...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCGAGCCAAGCTACCCCTaGAGAGCAGGGTTGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLEPSYP*RAGLWR Trigger: CCGCCACAACCCTGCTCTGCAGGGGTAGCTTGGCTC...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCCTCAGGGGGCTCTCTaGCCCACTGCCTTCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVPQGAL*PTAFGH Trigger: ATGCCCGAAGGCAGTGGGTCAGAGAGCCCCCTGAGG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCGAGCCAAGCTACCCCTaGAGAGCAGGGTTGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLEPSYP*RAGLWR Trigger: CCGCCACAACCCTGCTCTGCAGGGGTAGCTTGGCTC...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCAGAGCCGGCAGCGGGTaGATGGGCCCCTGGCATATT | + |
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Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLRAGSG*MGPWHI Trigger: AATATGCCAGGGGCCCATCCACCCGCTGCCGGCTCT...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTGCACTTCGGGACCAGTaGAGCCAAGCTACCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSALRDQ*SQATPA Trigger: TGCAGGGGTAGCTTGGCTCCACTGGTCCCGAAGTGC...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGTCCCACCACGGCCTGTaGGGACTTGCCGGACTGGTA | + |
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Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVSHHGL*GLAGLV Trigger: TACCAGTCCGGCAAGTCCTCACAGGCCGTGGTGGGA...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTCAAACGCCATGGGACTaGAGAGAAGACGGGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSQTPWD*REDGQS Trigger: GCTCTGCCCGTCTTCTCTCCAGTCCCATGGCGTTTG...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGAGAGCCGGCAGCGGGTaGATGGGCCCCTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVRAGSG*MGPWHI Trigger: AATATGCCAGGGGCCCATCCACCCGCTGCCGGCTCT...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCGCACTTCGGGACCAGTaGAGCCAAGCTACCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLALRDQ*SQATPA Trigger: TGCAGGGGTAGCTTGGCTCCACTGGTCCCGAAGTGC...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTGCTTGACCAGGCCCTaGAGCTTGCAGGAGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLCLTRP*SLQEYR Trigger: TCTGTACTCCTGCAAGCTTCAGGGCCTGGTCAAGCA...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCCTCCCAGAGCTCTCCTaGCTCTGTTGGAGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLLPELS*LCWSPV Trigger: AACAGGACTCCAACAGAGTCAGGAGAGCTCTGGGAG...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCGAACCAAAAGAGCCCTaGCGAAGGAGCCCTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLEPKEP*RRSPGQ Trigger: TTGGCCAGGGCTCCTTCGGCAGGGCTCTTTTGGTTC...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCCTGGTATGCCTCCCGTaGTCCTGTGGGTTACCTGAT | + |
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Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLLVCLP*SCGLPD Trigger: ATCAGGTAACCCACAGGAGCACGGGAGGCATACCAG...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCCAAACGCCATGGGACTaGAGAGAAGACGGGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLQTPWD*REDGQS Trigger: GCTCTGCCCGTCTTCTCTCCAGTCCCATGGCGTTTG...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCGGGTGGATGGGCCCCTaGCATATTTTCAGGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLGWMGP*HIFRIR Trigger: CCTGATCCTGAAAATATGCCAGGGGCCCATCCACCC...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCCGGCAGCGGGTGGATaGGCCCCTGGCATATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVPAAGG*APGIFS Trigger: TGAAAATATGCCAGGGGCCCATCCACCCGCTGCCGG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCTGCTTGACCAGGCCCTaGAGCTTGCAGGAGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLCLTRP*SLQEYR Trigger: TCTGTACTCCTGCAAGCTTCAGGGCCTGGTCAAGCA...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCCTCCTGTGGGTTACCTaGTTCTGGATTTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLLLWVT*FWISSG Trigger: GCCAGAGGAAATCCAGAATCAGGTAACCCACAGGAG...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCCTTCGACATTGGAACTaGGACCGTGTCTCTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLLRHWN*DRVSPT Trigger: GGTGGGAGAGACACGGTCCCAGTTCCAATGTCGAAG...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGTGCTTGACCAGGCCCTaGAGCTTGCAGGAGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVCLTRP*SLQEYR Trigger: TCTGTACTCCTGCAAGCTTCAGGGCCTGGTCAAGCA...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR TCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCTCCCAGAGCTCTCCTaGCTCTGTTGGAGTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVLPELS*LCWSPV Trigger: AACAGGACTCCAACAGAGTCAGGAGAGCTCTGGGAG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCTGGTATGCCTCCCGTaGTCCTGTGGGTTACCTGAT | + |
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Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVLVCLP*SCGLPD Trigger: ATCAGGTAACCCACAGGAGCACGGGAGGCATACCAG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTTGGGGTGCTTCATTTTaGCGAGCAGAACAGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSWGASF*RAEQPL Trigger: AAGAGGCTGTTCTGCTCGCCAAAATGAAGCACCCCA...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGGGGTGGATGGGCCCCTaGCATATTTTCAGGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVGWMGP*HIFRIR Trigger: CCTGATCCTGAAAATATGCCAGGGGCCCATCCACCC...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCATTGTACCGGCAGCGGGTGGATaGGCCCCTGGCATATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: CNCCRECSYEVGVVTLIVPAAGG*APGIFS Trigger: TGAAAATATGCCAGGGGCCCATCCACCCGCTGCCGG...TACAATGAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCTTCGACATTGGAACTaGGACCGTGTCTCTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVLRHWN*DRVSPT Trigger: GGTGGGAGAGACACGGTCCCAGTTCCAATGTCGAAG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | TGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCATTGTAGAACCAAAAGAGCCCTaGCGAAGGAGCCCTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: CNCCRECSYEVGVVTLIVEPKEP*RRSPGQ Trigger: TTGGCCAGGGCTCCTTCGGCAGGGCTCTTTTGGTTC...TACAATGAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTTGCTGTTTAATCCTCTaGATCAGATCCCCTCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSCCLIL*IRSPPS Trigger: TGACGGAGGGGATCTGATGCAGAGGATTAAACAGCA...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTTGGATTTCCTCTGGCTaGTCTTTCCAATGCATTCCC | + |
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Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSWISSG*SFQCIP Trigger: GGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCA...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTTCCCCGTATCCTACGTaGTTCTTTAGTTCTGACACC | + |
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Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSSPYPT*FFSSDT Trigger: GGTGTCAGAACTAAAGAAGCACGTAGGATACGGGGA...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR CCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCTGGGGTGCTTCATTTTaGCGAGCAGAACAGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLWGASF*RAEQPL Trigger: AAGAGGCTGTTCTGCTCGCCAAAATGAAGCACCCCA...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTTGGCAAATGTCTGATTaGTGCTTTCCTGCAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSWQMSD*CFPAEP Trigger: TGGTTCTGCAGGAAAGCAGCAATCAGACATTTGCCA...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCATAGAGGCAGAGTTTaGTTCTCCCAGAGCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVHRGRV*FSQSSP Trigger: AGGAGAGCTCTGGGAGAAGCAAACTCTGCCTCTATG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS-3UTR GCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCTGGATTTCCTCTGGCTaGTCTTTCCAATGCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLWISSG*SFQCIP Trigger: GGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCA...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTAGAGCCGGCAGCGGGTaGATGGGCCCCTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTRAGSG*MGPWHI Trigger: AATATGCCAGGGGCCCATCCACCCGCTGCCGGCTCT...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR TCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCTTCATGGCAAATGTCTaGTTGCTGCTTTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLFMANV*LLLSCR Trigger: TCTGCAGGAAAGCAGCAATCAGACATTTGCCATGAA...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCCCCTTCAGCTTCAAATaGCTCCTTAAAGGCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLPFSFK*LLKGNN Trigger: ATTGTTGCCTTTAAGGAGTCATTTGAAGCTGAAGGG...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCCTTTTCCATTGTGGGTaGGGAAGACATTTTTCGACT | + |
|
Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLLFHCG*GRHFST Trigger: AGTCGAAAAATGTCTTCCTCACCCACAATGGAAAAG...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCGCAACAATATTGGGGTaGTTCATTTTGGCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLATILG*FILASR Trigger: TCTGCTCGCCAAAATGAAGCACCCCAATATTGTTGC...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGTGCTGTTTAATCCTCTaGATCAGATCCCCTCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVCCLIL*IRSPPS Trigger: TGACGGAGGGGATCTGATGCAGAGGATTAAACAGCA...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCAGAGTTCATACAGAATaGATCCCAAGGACCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLRVHTE*IPRTRC Trigger: ACATCTGGTCCTTGGGATGCATTCTGTATGAACTCT...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCTGGGGTTGTACCAGTaGTTTCCAATTCAGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVLGLYQ*FPIQYG Trigger: GCCATACTGAATTGGAAAGCACTGGTACAACCCCAG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCGTTCTCCCAGATTTCTaGAGGCACATAATAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSQSSLPFPAISVSRQCLVLPDF*RHIIRC Trigger: ACACCTTATTATGTGCCTCCAGAAATCTGGGAGAAC...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTCCGGCAGCGGGTGGATaGGCCCCTGGCATATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTPAAGG*APGIFS Trigger: TGAAAATATGCCAGGGGCCCATCCACCCGCTGCCGG...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTATTCTGGATTTCCTCTaGCTGCTCTTTCCAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSILDFL*LLFPMH Trigger: ATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGAAT...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR TCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGTTCATGGCAAATGTCTaGTTGCTGCTTTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVFMANV*LLLSCR Trigger: TCTGCAGGAAAGCAGCAATCAGACATTTGCCATGAA...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTGAACCAAAAGAGCCCTaGCGAAGGAGCCCTGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTEPKEP*RRSPGQ Trigger: TTGGCCAGGGCTCCTTCGGCAGGGCTCTTTTGGTTC...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCAGAGTTCATACAGAATaGATCCCAAGGACCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLRVHTE*IPRTRC Trigger: ACATCTGGTCCTTGGGATGCATTCTGTATGAACTCT...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTGTTTTTCCAACTATTTaGCTGGAATGGATGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSVFPTI*LEWMLQ Trigger: CTGAAGCATCCATTCCAGGCAAATAGTTGGAAAAAC...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | TGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCATTGTACATAGAGGCAGAGTTTaGTTCTCCCAGAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CNCCRECSYEVGVVTLIVHRGRV*FSQSSP Trigger: AGGAGAGCTCTGGGAGAAGCAAACTCTGCCTCTATG...TACAATGAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCGTTCTCCCAGATTTCTaGAGGCACATAATAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLVLPDF*RHIIRC Trigger: ACACCTTATTATGTGCCTCCAGAAATCTGGGAGAAC...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTCTTTCCAATTCAGTATaGCTACACTTTCTACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSLSNSV*LHFLPR Trigger: ACGTGGTAGAAAGTGTAGCCATACTGAATTGGAAAG...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGTACCTGGATTTCCTCTaGCTGCTCTTTCCAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVYLDFL*LLFPMH Trigger: ATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGGTA...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033865.16 |
||
| CDS-3UTR TCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCCCTTCAGCTTCAAATaGCTCCTTAAAGGCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVPFSFK*LLKGNN Trigger: ATTGTTGCCTTTAAGGAGTCATTTGAAGCTGAAGGG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR TCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCTTTTCCATTGTGGGTaGGGAAGACATTTTTCGACT | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVLFHCG*GRHFST Trigger: AGTCGAAAAATGTCTTCCTCACCCACAATGGAAAAG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTCTCCCAGAGCTCTCCTaGCTCTGTTGGAGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTLPELS*LCWSPV Trigger: AACAGGACTCCAACAGAGTCAGGAGAGCTCTGGGAG...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCGTTTTTCCAACTATTTaGCTGGAATGGATGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLVFPTI*LEWMLQ Trigger: CTGAAGCATCCATTCCAGGCAAATAGTTGGAAAAAC...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | TGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCATTGTACTGGGGTTGTACCAGTaGTTTCCAATTCAGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CNCCRECSYEVGVVTLIVLGLYQ*FPIQYG Trigger: GCCATACTGAATTGGAAAGCACTGGTACAACCCCAG...TACAATGAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTCTTCGACATTGGAACTaGGACCGTGTCTCTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTLRHWN*DRVSPT Trigger: GGTGGGAGAGACACGGTCCCAGTTCCAATGTCGAAG...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTCTCCTGTGGGTTACCTaGTTCTGGATTTCCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTLLWVT*FWISSG Trigger: GCCAGAGGAAATCCAGAATCAGGTAACCCACAGGAG...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | TGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCATTGTAGCAACAATATTGGGGTaGTTCATTTTGGCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CNCCRECSYEVGVVTLIVATILG*FILASR Trigger: TCTGCTCGCCAAAATGAAGCACCCCAATATTGTTGC...TACAATGAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTAATAACTTCCCTTTTTaGTGTTTAATCCTCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FLSPHFHSQPSVSLASVSNNFPF*CLILCI Trigger: GATGCAGAGGATTAAACAGCAAAAAGGGAAGTTATT...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCTTTCCAATTCAGTATaGCTACACTTTCTACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVLSNSV*LHFLPR Trigger: ACGTGGTAGAAAGTGTAGCCATACTGAATTGGAAAG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCAATAACTTCCCTTTTTaGTGTTTAATCCTCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: DSCNCCRECSYEVGVVTLNNFPF*CLILCI Trigger: GATGCAGAGGATTAAACAGCAAAAAGGGAAGTTATT...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | TGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCATTGTAAGAGTTCATACAGAATaGATCCCAAGGACCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CNCCRECSYEVGVVTLIVRVHTE*IPRTRC Trigger: ACATCTGGTCCTTGGGATGCATTCTGTATGAACTCT...TACAATGAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTCATAGAGGCAGAGTTTaGTTCTCCCAGAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTHRGRV*FSQSSP Trigger: AGGAGAGCTCTGGGAGAAGCAAACTCTGCCTCTATG...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTTGGGGTGCTTCATTTTaGCGAGCAGAACAGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTWGASF*RAEQPL Trigger: AAGAGGCTGTTCTGCTCGCCAAAATGAAGCACCCCA...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGGAATCCTTCTGCACCTaGTCTATATATTGTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVESFCT*SIYCVC Trigger: ACATACACAATATATAGACCAGGTGCAGAAGGATTC...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTTGCTGTTTAATCCTCTaGATCAGATCCCCTCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTCCLIL*IRSPPS Trigger: TGACGGAGGGGATCTGATGCAGAGGATTAAACAGCA...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTTCCCCGTATCCTACGTaGTTCTTTAGTTCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTSPYPT*FFSSDT Trigger: GGTGTCAGAACTAAAGAAGCACGTAGGATACGGGGA...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | TGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCATTGTACTTTCCAATTCAGTATaGCTACACTTTCTACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: CNCCRECSYEVGVVTLIVLSNSV*LHFLPR Trigger: ACGTGGTAGAAAGTGTAGCCATACTGAATTGGAAAG...TACAATGAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTTTCATGGCAAATGTCTaGTTGCTGCTTTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTFMANV*LLLSCR Trigger: TCTGCAGGAAAGCAGCAATCAGACATTTGCCATGAA...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTTGGCAAATGTCTGATTaGTGCTTTCCTGCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTWQMSD*CFPAEP Trigger: TGGTTCTGCAGGAAAGCAGCAATCAGACATTTGCCA...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTGCAACAATATTGGGGTaGTTCATTTTGGCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTATILG*FILASR Trigger: TCTGCTCGCCAAAATGAAGCACCCCAATATTGTTGC...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTGTTCTCCCAGATTTCTaGAGGCACATAATAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTVLPDF*RHIIRC Trigger: ACACCTTATTATGTGCCTCCAGAAATCTGGGAGAAC...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| 3UTR CAA 72 bp | ACTTCCGTTGTGTTGAAATCTCGCAAGGGTTCTGGATaGCTTTGTAAACTTGCGATATACATTTTCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVVLKSRKGSG*LCKLAIYIFSV Trigger: GACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTTGCGAGATTTCAACACAACGGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTGTTTTTCCAACTATTTaGCTGGAATGGATGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTVFPTI*LEWMLQ Trigger: CTGAAGCATCCATTCCAGGCAAATAGTTGGAAAAAC...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTGAATCCTTCTGCACCTaGTCTATATATTGTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTESFCT*SIYCVC Trigger: ACATACACAATATATAGACCAGGTGCAGAAGGATTC...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS TCA 90 bp | GGGCGGTGGGAAGGGTTCCTTTTCAGCATCTGCTTGACCAGGCCCTaGAGCTTGCAGGAGTACAGAGCCGGCAGCGGGTGGATGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRWEGFLFSICLTRP*SLQEYRAGSGWMGP Trigger: GGGGCCCATCCACCCGCTGCCGGCTCTGTACTCCTGCAAGCTTCAGGGCCTGGTCAAGCAGATGCTGAAAAGGAACCCTTCCCACCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS TCA 90 bp | TTGTGGCGGAGGGGCGGTGGGAAGGGTTCCTTTTCAGCATCTGCTTaGCCAGGCCCTGAAGCTTGCAGGAGTACAGAGCCGGCAGCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LWRRGGGKGSFSASA*PGPEACRSTEPAAG Trigger: ACCCGCTGCCGGCTCTGTACTCCTGCAAGCTTCAGGGCCTGGTCAAGCAGATGCTGAAAAGGAACCCTTCCCACCGCCCCTCCGCCACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS TCA 90 bp | GCTTCGACATTGGAACTGGGACCGTGTCTCTCCCACCACGGCCTGTaGGGACTTGCCGGACTGGTATGCCTCCCGTGCTCCTGTGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASTLELGPCLSHHGL*GLAGLVCLPCSCGL Trigger: TAACCCACAGGAGCACGGGAGGCATACCAGTCCGGCAAGTCCTCACAGGCCGTGGTGGGAGAGACACGGTCCCAGTTCCAATGTCGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS CCA 90 bp | CGGCCTGTGAGGACTTGCCGGACTGGTATGCCTCCCGTGCTCCTGTaGGTTACCTGGATTTCCTCTGGCTGCTCTTTCCAATGCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPVRTCRTGMPPVLL*VTWISSGCSFQCIP Trigger: GGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGGTAACCCACAGGAGCACGGGAGGCATACCAGTCCGGCAAGTCCTCACAGGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033865.16 |
||
| CDS-3UTR CAA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGCCCTGCAGAGCAGGGTaGTGGCGGAGGGGCGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVPCRAG*WRRGGG Trigger: CCCACCGCCCCTCCGCCACAACCCTGCTCTGCAGGG...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS CCA 90 bp | AGGACTTGCCGGACTGGTATGCCTCCCGTGCTCCTGTGGGTTACCTaGATTTCCTCTGGCTGCTCTTTCCAATGCATTCCCAGCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTCRTGMPPVLLWVT*ISSGCSFQCIPSWG Trigger: ACCCCAGCTGGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGGTAACCCACAGGAGCACGGGAGGCATACCAGTCCGGCAAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033865.16 |
||
| CDS TCA 90 bp | TGTGTATGTCTGAAATGCCTGACTGAGATCAGCGTCCTTCAGCATTaGCAGCAAGGCCTCAGGGGGCTCTCTGACCCACTGCCTTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVCLKCLTEISVLQH*QQGLRGLSDPLPSG Trigger: GCCCGAAGGCAGTGGGTCAGAGAGCCCCCTGAGGCCTTGCTGTCAATGCTGAAGGACGCTGATCTCAGTCAGGCATTTCAGACATACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS CCA 90 bp | GACTGGTATGCCTCCCGTGCTCCTGTGGGTTACCTGGATTTCCTCTaGCTGCTCTTTCCAATGCATTCCCAGCTGGGGTTGTACCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DWYASRAPVGYLDFL*LLFPMHSQLGLYQC Trigger: GCACTGGTACAACCCCAGCTGGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGGTAACCCACAGGAGCACGGGAGGCATACCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033865.16 |
||
| CDS TCA 90 bp | AGGACTTGCCGGACTGGTATGCCTCCCGTGCTCCTGTGGGTTACCTaGTTCTGGATTTCCTCTGGCTGCTCTTTCCAATGCATTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTCRTGMPPVLLWVT*FWISSGCSFQCIPS Trigger: GCTGGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGAATCAGGTAACCCACAGGAGCACGGGAGGCATACCAGTCCGGCAAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTCAGCGTCCTTCAGCATaGACAGCAAGGCCTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLSPHFHSQPSVSLASVSQRPSA*TARPQG Trigger: CCCCTGAGGCCTTGCTGTCAATGCTGAAGGACGCTG...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS CCA 90 bp | TATGCCTCCCGTGCTCCTGTGGGTTACCTGATTCTGGATTTCCTCTaGCTGCTCTTTCCAATGCATTCCCAGCTGGGGTTGTACCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YASRAPVGYLILDFL*LLFPMHSQLGLYQC Trigger: GCACTGGTACAACCCCAGCTGGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGAATCAGGTAACCCACAGGAGCACGGGAGGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCCAGCGTCCTTCAGCATaGACAGCAAGGCCTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DSCNCCRECSYEVGVVTLQRPSA*TARPQG Trigger: CCCCTGAGGCCTTGCTGTCAATGCTGAAGGACGCTG...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 90 bp | TCTCCCAGATTTCTGGAGGCACATAATAAGGTGTTCCCACGTACGTaGATGCAAACGCCATGGGACTGGAGAGAAGACGGGCAGAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPRFLEAHNKVFPRT*MQTPWDWREDGQSQ Trigger: TTGGCTCTGCCCGTCTTCTCTCCAGTCCCATGGCGTTTGCATGCACGTACGTGGGAACACCTTATTATGTGCCTCCAGAAATCTGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 90 bp | TCCTTCAGCATTGACAGCAAGGCCTCAGGGGGCTCTCTGACCCACTaGCTTCGGGCATTTTCTTCATACTTTATCACAGACCCACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFSIDSKASGGSLTH*LRAFSSYFITDPPL Trigger: CAGAGGTGGGTCTGTGATAAAGTATGAAGAAAATGCCCGAAGGCAGTGGGTCAGAGAGCCCCCTGAGGCCTTGCTGTCAATGCTGAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 90 bp | TGGCAAATGTCTGATTGCTGCTTTCCTGCAGAACCAAAAGAGCCCTaGCGAAGGAGCCCTGGCCAATCACTCTCAGGACTGTGTAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WQMSDCCFPAEPKEP*RRSPGQSLSGLCSC Trigger: ACAACTACACAGTCCTGAGAGTGATTGGCCAGGGCTCCTTCGGCAGGGCTCTTTTGGTTCTGCAGGAAAGCAGCAATCAGACATTTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 90 bp | CCCACCTCTGTCATCCTCTGCCGTGAAACTGGAGGTAAGGATAGATaGTTTCTCCAAAGCTTCGACATTGGAACTGGGACCGTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PTSVILCRETGGKDR*FLQSFDIGTGTVSL Trigger: GAGAGACACGGTCCCAGTTCCAATGTCGAAGCTTTGGAGAAAGCATCTATCCTTACCTCCAGTTTCACGGCAGAGGATGACAGAGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 90 bp | CGTTCTCCGAGGAGTTGTCCACCAGGTCCATCCCCGTATCCTACGTaGTTCTTTAGTTCTGACACCCAATCAGGGTTTTCGTTATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPRSCPPGPSPYPT*FFSSDTQSGFSLSS Trigger: GGAAGATAACGAAAACCCTGATTGGGTGTCAGAACTAAAGAAGCACGTAGGATACGGGGATGGACCTGGTGGACAACTCCTCGGAGAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTACCACGTTCTTCCTCTaGCATAGAGGCAGAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLSPHFHSQPSVSLASVSTTFFL*HRGRVC Trigger: GCAAACTCTGCCTCTATGCAAGAGGAAGAACGTGGT...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCACCACGTTCTTCCTCTaGCATAGAGGCAGAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSQSSLPFPAISVSRQCLTTFFL*HRGRVC Trigger: GCAAACTCTGCCTCTATGCAAGAGGAAGAACGTGGT...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCATTGTACAGCGTCCTTCAGCATaGACAGCAAGGCCTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CNCCRECSYEVGVVTLIVQRPSA*TARPQG Trigger: CCCCTGAGGCCTTGCTGTCAATGCTGAAGGACGCTG...TACAATGAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS TCA 90 bp | CTTCTGCACCTGGTCTATATATTGTGTATGTCTGAAATGCCTGACTaGGATCAGCGTCCTTCAGCATTGACAGCAAGGCCTCAGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLHLVYILCMSEMPD*DQRPSALTARPQGA Trigger: AGCCCCCTGAGGCCTTGCTGTCAATGCTGAAGGACGCTGATCTCAGTCAGGCATTTCAGACATACACAATATATAGACCAGGTGCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | GACAGCTGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCACCACGTTCTTCCTCTaGCATAGAGGCAGAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSCNCCRECSYEVGVVTLTTFFL*HRGRVC Trigger: GCAAACTCTGCCTCTATGCAAGAGGAAGAACGTGGT...GAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACAGCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 90 bp | CTCTGGCTGCTCTTTCCAATGCATTCCCAGCTGGGGTTGTACCAGTaGTTTCCAATTCAGTATGGCTACACTTTCTACCACGTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LWLLFPMHSQLGLYQ*FPIQYGYTFYHVLP Trigger: AGGAAGAACGTGGTAGAAAGTGTAGCCATACTGAATTGGAAAGCACTGGTACAACCCCAGCTGGGAATGCATTGGAAAGAGCAGCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS CCA 90 bp | CATAATAAGGTGTTCCCACGTACGTGCATGCAAACGCCATGGGACTaGAGAGAAGACGGGCAGAGCCAAAATCTCCCAATTTCACTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HNKVFPRTCMQTPWD*REDGQSQNLPISLF Trigger: GAAAAGTGAAATTGGGAGATTTTGGCTCTGCCCGTCTTCTCTCCAGTCCCATGGCGTTTGCATGCACGTACGTGGGAACACCTTATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 90 bp | CTTTCCAATTCAGTATGGCTACACTTTCTACCACGTTCTTCCTCTTaGATAGAGGCAGAGTTTGCTTCTCCCAGAGCTCTCCTGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSNSVWLHFLPRSSS*IEAEFASPRALLTL Trigger: CAGAGTCAGGAGAGCTCTGGGAGAAGCAAACTCTGCCTCTATGCAAGAGGAAGAACGTGGTAGAAAGTGTAGCCATACTGAATTGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS CCA 90 bp | AATGCATTCCCAGCTGGGGTTGTACCAGTGCTTTCCAATTCAGTATaGCTACACTTTCTACCACGTTCTTCCTCTTGCATAGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NAFPAGVVPVLSNSV*LHFLPRSSSCIEAE Trigger: CTCTGCCTCTATGCAAGAGGAAGAACGTGGTAGAAAGTGTAGCCATACTGAATTGGAAAGCACTGGTACAACCCCAGCTGGGAATGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTTAAAGGCAACAATATaGGGGTGCTTCATTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSQSSLPFPAISVSRQCLLKATI*GCFILA Trigger: CGCCAAAATGAAGCACCCCAATATTGTTGCCTTTAA...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCGGTTTTTCCAACTATTaGCCTGGAATGGATGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSQSSLPFPAISVSRQCLGFSNY*PGMDAS Trigger: TGAAGCATCCATTCCAGGCAAATAGTTGGAAAAACC...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCCACCTGGTCTATATATaGTGTATGTCTGAAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSQSSLPFPAISVSRQCLHLVYI*CMSEMP Trigger: AGGCATTTCAGACATACACAATATATAGACCAGGTG...GAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTCAGTCCTCACTTCCATTCCCAGCCATCAGTGTCTCTCGCCAGTGTCTCTCACCTGGTCTATATATaGTGTATGTCTGAAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLSPHFHSQPSVSLASVSHLVYI*CMSEMP Trigger: AGGCATTTCAGACATACACAATATATAGACCAGGTG...AGAGACACTGGCGAGAGACACTGATGGCTGGGAATGGAAGTGAGGACTGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 90 bp | GGCATTTTCTTCATACTTTATCACAGACCCACCTCTGTCATCCTCTaGCGTGAAACTGGAGGTAAGGATAGATGCTTTCTCCAAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GIFFILYHRPTSVIL*RETGGKDRCFLQSF Trigger: GAAGCTTTGGAGAAAGCATCTATCCTTACCTCCAGTTTCACGGCAGAGGATGACAGAGGTGGGTCTGTGATAAAGTATGAAGAAAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TGTTACATGGTAATTGGGGATAACAGGCACTGGACAGCTGTAACTGTTGCCGTGTTAAAGGCAACAATATaGGGGTGCTTCATTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CYMVIGDNRHWTAVTVAVLKATI*GCFILA Trigger: CGCCAAAATGAAGCACCCCAATATTGTTGCCTTTAA...CACGGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 90 bp | TACCCTTCAGCTTCAAATGACTCCTTAAAGGCAACAATATTGGGGTaGTTCATTTTGGCGAGCAGAACAGCCTCTTTCCTAGAAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YPSASNDSLKATILG*FILASRTASFLEVC Trigger: ACAGACTTCTAGGAAAGAGGCTGTTCTGCTCGCCAAAATGAAGCACCCCAATATTGTTGCCTTTAAGGAGTCATTTGAAGCTGAAGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | TGTAACTGTTGCCGTGAGTGTTCCTATGAGGTAGGCGTTGTTACTCTCATTGTATTAAAGGCAACAATATaGGGGTGCTTCATTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CNCCRECSYEVGVVTLIVLKATI*GCFILA Trigger: CGCCAAAATGAAGCACCCCAATATTGTTGCCTTTAA...TACAATGAGAGTAACAACGCCTACCTCATAGGAACACTCACGGCAACAGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGTTCTGGATTGCTTTGTAAACTTGCGATATACATTTTCTCAGTCCTCACTGGTTTTTCCAACTATTaGCCTGGAATGGATGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGSGLLCKLAIYIFSVLTGFSNY*PGMDAS Trigger: TGAAGCATCCATTCCAGGCAAATAGTTGGAAAAACC...AGTGAGGACTGAGAAAATGTATATCGCAAGTTTACAAAGCAATCCAGAACCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 72 bp | GCAAGCACTTCGGGACCAGTGGAGCCAAGCTACCCCTaGAGAGCAGGGTTGTGGCGGAGGGGCGGTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASTSGPVEPSYP*RAGLWRRGGGK Trigger: CTTCCCACCGCCCCTCCGCCACAACCCTGCTCTGCAGGGGTAGCTTGGCTCCACTGGTCCCGAAGTGCTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS GCA 72 bp | GGGACCGTGTCTCTCCCACCACGGCCTGTGAGGACTTaGCGGACTGGTATGCCTCCCGTGCTCCTGTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GTVSLPPRPVRT*RTGMPPVLLWV Trigger: AACCCACAGGAGCACGGGAGGCATACCAGTCCGGCAAGTCCTCACAGGCCGTGGTGGGAGAGACACGGTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS TCA 72 bp | TTGGAACTGGGACCGTGTCTCTCCCACCACGGCCTGTaGGGACTTGCCGGACTGGTATGCCTCCCGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LELGPCLSHHGL*GLAGLVCLPCS Trigger: GGAGCACGGGAGGCATACCAGTCCGGCAAGTCCTCACAGGCCGTGGTGGGAGAGACACGGTCCCAGTTCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS CCA 72 bp | TCTGATGATCTGAGGGGGCAAGCACTTCGGGACCAGTaGAGCCAAGCTACCCCTGCAGAGCAGGGTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SDDLRGQALRDQ*SQATPAEQGCG Trigger: GCCACAACCCTGCTCTGCAGGGGTAGCTTGGCTCCACTGGTCCCGAAGTGCTTGCCCCCTCAGATCATCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
||
| CDS TCA 72 bp | GAAGGGTTCCTTTTCAGCATCTGCTTGACCAGGCCCTaGAGCTTGCAGGAGTACAGAGCCGGCAGCGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: EGFLFSICLTRP*SLQEYRAGSGW Trigger: CCACCCGCTGCCGGCTCTGTACTCCTGCAAGCTTCAGGGCCTGGTCAAGCAGATGCTGAAAAGGAACCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS TCA 72 bp | AGGGGCGGTGGGAAGGGTTCCTTTTCAGCATCTGCTTaGCCAGGCCCTGAAGCTTGCAGGAGTACAGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: RGGGKGSFSASA*PGPEACRSTEP Trigger: CGGCTCTGTACTCCTGCAAGCTTCAGGGCCTGGTCAAGCAGATGCTGAAAAGGAACCCTTCCCACCGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS CCA 72 bp | GCCTCCCGTGCTCCTGTGGGTTACCTGGATTTCCTCTaGCTGCTCTTTCCAATGCATTCCCAGCTGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ASRAPVGYLDFL*LLFPMHSQLGL Trigger: CAACCCCAGCTGGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGGTAACCCACAGGAGCACGGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033865.16 |
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| CDS GCA 72 bp | CCCGTGCTCCTGTGGGTTACCTGGATTTCCTCTGGCTaGTCTTTCCAATGCATTCCCAGCTGGGGTTGTACC | + |
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Preference number: 6 (lower is better) Translates to: PVLLWVTWISSG*SFQCIPSWGCT Trigger: GGTACAACCCCAGCTGGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGGTAACCCACAGGAGCACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033865.16 |
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| CDS CCA 72 bp | CGGACTGGTATGCCTCCCGTGCTCCTGTGGGTTACCTaGATTTCCTCTGGCTGCTCTTTCCAATGCATTCCC | + |
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Preference number: 6 (lower is better) Translates to: RTGMPPVLLWVT*ISSGCSFQCIP Trigger: GGGAATGCATTGGAAAGAGCAGCCAGAGGAAATCCAGGTAACCCACAGGAGCACGGGAGGCATACCAGTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033865.16 |
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| CDS GCA 72 bp | TCTGATTGCTGCTTTCCTGCAGAACCAAAAGAGCCCTaGCGAAGGAGCCCTGGCCAATCACTCTCAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: SDCCFPAEPKEP*RRSPGQSLSGL Trigger: CAGTCCTGAGAGTGATTGGCCAGGGCTCCTTCGGCAGGGCTCTTTTGGTTCTGCAGGAAAGCAGCAATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | TGGAGGCACATAATAAGGTGTTCCCACGTACGTGCATaGAAACGCCATGGGACTGGAGAGAAGACGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: WRHIIRCSHVRA*KRHGTGEKTGR Trigger: TCTGCCCGTCTTCTCTCCAGTCCCATGGCGTTTGCATGCACGTACGTGGGAACACCTTATTATGTGCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | CATGACAGAATCGAGATCACCGTCGACGCTGTCCGATaGCGTGTCTTCAGAAAGGGGACCTTTCAGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: HDRIEITVDAVR*RVFRKGTFQES Trigger: GGATTCCTGAAAGGTCCCCTTTCTGAAGACACGGCATCGGACAGCGTCGACGGTGATCTCGATTCTGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS CCA 72 bp | GTGTTCCCACGTACGTGCATGCAAACGCCATGGGACTaGAGAGAAGACGGGCAGAGCCAAAATCTCCCAATT | + |
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Preference number: 6 (lower is better) Translates to: VFPRTCMQTPWD*REDGQSQNLPI Trigger: AATTGGGAGATTTTGGCTCTGCCCGTCTTCTCTCCAGTCCCATGGCGTTTGCATGCACGTACGTGGGAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS CAA 72 bp | GAGGTAAGGATAGATGCTTTCTCCAAAGCTTCGACATaGGAACTGGGACCGTGTCTCTCCCACCACGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: EVRIDAFSKAST*ELGPCLSHHGL Trigger: CAGGCCGTGGTGGGAGAGACACGGTCCCAGTTCCAATGTCGAAGCTTTGGAGAAAGCATCTATCCTTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS TCA 72 bp | CCTTCAGCATTGACAGCAAGGCCTCAGGGGGCTCTCTaGCCCACTGCCTTCGGGCATTTTCTTCATACTTTA | + |
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Preference number: 6 (lower is better) Translates to: PSALTARPQGAL*PTAFGHFLHTL Trigger: TAAAGTATGAAGAAAATGCCCGAAGGCAGTGGGTCAGAGAGCCCCCTGAGGCCTTGCTGTCAATGCTGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS TCA 72 bp | CATCCAGCCGAGGTTCAAATCTCTCTGGGTCTAACATaGCAGAATCGAGATCACCGTCGACGCTGTCCGATG | + |
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Preference number: 6 (lower is better) Translates to: HPAEVQISLGLT*QNRDHRRRCPM Trigger: CATCGGACAGCGTCGACGGTGATCTCGATTCTGTCATGTTAGACCCAGAGAGATTTGAACCTCGGCTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | TTTCTGGAGGCACATAATAAGGTGTTCCCACGTACGTaGATGCAAACGCCATGGGACTGGAGAGAAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: FLEAHNKVFPRT*MQTPWDWREDG Trigger: CCCGTCTTCTCTCCAGTCCCATGGCGTTTGCATGCACGTACGTGGGAACACCTTATTATGTGCCTCCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS CCA 72 bp | AATAAGGTGTTCCCACGTACGTGCATGCAAACGCCATaGGACTGGAGAGAAGACGGGCAGAGCCAAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: NKVFPRTCMQTP*DWREDGQSQNL Trigger: GAGATTTTGGCTCTGCCCGTCTTCTCTCCAGTCCCATGGCGTTTGCATGCACGTACGTGGGAACACCTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | TCTACCACGTTCTTCCTCTTGCATAGAGGCAGAGTTTaGTTCTCCCAGAGCTCTCCTGACTCTGTTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: STTFFLLHRGRV*FSQSSPDSVGV Trigger: GACTCCAACAGAGTCAGGAGAGCTCTGGGAGAAGCAAACTCTGCCTCTATGCAAGAGGAAGAACGTGGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | ATTGACAGCAAGGCCTCAGGGGGCTCTCTGACCCACTaGCTTCGGGCATTTTCTTCATACTTTATCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: IDSKASGGSLTH*LRAFSSYFITD Trigger: GTCTGTGATAAAGTATGAAGAAAATGCCCGAAGGCAGTGGGTCAGAGAGCCCCCTGAGGCCTTGCTGTCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | GTCATCCTCTGCCGTGAAACTGGAGGTAAGGATAGATaGTTTCTCCAAAGCTTCGACATTGGAACTGGGACC | + |
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Preference number: 6 (lower is better) Translates to: VILCRETGGKDR*FLQSFDIGTGT Trigger: GGTCCCAGTTCCAATGTCGAAGCTTTGGAGAAAGCATCTATCCTTACCTCCAGTTTCACGGCAGAGGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | TCAGTATGGCTACACTTTCTACCACGTTCTTCCTCTTaGATAGAGGCAGAGTTTGCTTCTCCCAGAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SVWLHFLPRSSS*IEAEFASPRAL Trigger: GAGAGCTCTGGGAGAAGCAAACTCTGCCTCTATGCAAGAGGAAGAACGTGGTAGAAAGTGTAGCCATACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS CCA 72 bp | CCAGCTGGGGTTGTACCAGTGCTTTCCAATTCAGTATaGCTACACTTTCTACCACGTTCTTCCTCTTGCATA | + |
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Preference number: 6 (lower is better) Translates to: PAGVVPVLSNSV*LHFLPRSSSCI Trigger: TATGCAAGAGGAAGAACGTGGTAGAAAGTGTAGCCATACTGAATTGGAAAGCACTGGTACAACCCCAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS TCA 72 bp | CTGGTCTATATATTGTGTATGTCTGAAATGCCTGACTaGGATCAGCGTCCTTCAGCATTGACAGCAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LVYILCMSEMPD*DQRPSALTARP Trigger: AGGCCTTGCTGTCAATGCTGAAGGACGCTGATCTCAGTCAGGCATTTCAGACATACACAATATATAGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | TTCATACTTTATCACAGACCCACCTCTGTCATCCTCTaGCGTGAAACTGGAGGTAAGGATAGATGCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: FILYHRPTSVIL*RETGGKDRCFL Trigger: GAGAAAGCATCTATCCTTACCTCCAGTTTCACGGCAGAGGATGACAGAGGTGGGTCTGTGATAAAGTATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | GCTTCAAATGACTCCTTAAAGGCAACAATATTGGGGTaGTTCATTTTGGCGAGCAGAACAGCCTCTTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: ASNDSLKATILG*FILASRTASFL Trigger: TAGGAAAGAGGCTGTTCTGCTCGCCAAAATGAAGCACCCCAATATTGTTGCCTTTAAGGAGTCATTTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS CAA 72 bp | CCTGGCATATTTTCAGGATCAGGTTTTTCCAACTATTaGCCTGGAATGGATGCTTCAGAGCGCAGAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PGIFSGSGFSNY*PGMDASERRVH Trigger: ATGAACTCTGCGCTCTGAAGCATCCATTCCAGGCAAATAGTTGGAAAAACCTGATCCTGAAAATATGCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | TTAAGTATCGTGTCTTCAGGGAATAACTTCCCTTTTTaGTGTTTAATCCTCTGCATCAGATCCCCTCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: LSIVSSGNNFPF*CLILCIRSPPS Trigger: TGACGGAGGGGATCTGATGCAGAGGATTAAACAGCAAAAAGGGAAGTTATTCCCTGAAGACACGATACTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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| CDS GCA 72 bp | CTGGCATATTTTCAGGATCAGGTTTTTCCAACTATTTaGCTGGAATGGATGCTTCAGAGCGCAGAGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LAYFQDQVFPTI*LEWMLQSAEFI Trigger: TATGAACTCTGCGCTCTGAAGCATCCATTCCAGGCAAATAGTTGGAAAAACCTGATCCTGAAAATATGCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033865.16 ENSMUST00000110730.10 ENSMUST00000178324.2 |
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