Pregenerated sensors for NEK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026622Ensembl transcript IDs: ENSMUST00000027931.8
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCTCACACAGGTGAAGGCATACAGGGCCCTCAATAACGCACACTaGACACTGTTCTCTTCTGAAGCCATCTCAAGGGACTGTGGACAG | + |
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Preference number: 1 (lower is better) Translates to: ALTQVKAYRALNNAH*TLFSSEAISRDCGQ Trigger: CTGTCCACAGTCCCTTGAGATGGCTTCAGAAGAGAACAGTGTTCAGTGTGCGTTATTGAGGGCCCTGTATGCCTTCACCTGTGTGAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR GCA 90 bp | ACATTAGGAAGCAGACACACACATCCATTTGCAGACCACAAGCAATaGCACGAGCTCACCACACACAAAGGTTCCCGCCCACAGAACCAG | + |
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Preference number: 1 (lower is better) Translates to: TLGSRHTHPFADHKQ*HELTTHKGSRPQNQ Trigger: CTGGTTCTGTGGGCGGGAACCTTTGTGTGTGGTGAGCTCGTGGCATTGCTTGTGGTCTGCAAATGGATGTGTGTGTCTGCTTCCTAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR GCA 90 bp | TGCTTTTCACACAGGGACATTAGGAAGCAGACACACACATCCATTTaGAGACCACAAGCAATGCCACGAGCTCACCACACACAAAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: CFSHRDIRKQTHTSI*RPQAMPRAHHTQRF Trigger: GAACCTTTGTGTGTGGTGAGCTCGTGGCATTGCTTGTGGTCTGCAAATGGATGTGTGTGTCTGCTTCCTAATGTCCCTGTGTGAAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR GCA 90 bp | AGTATCACTATAGACCAAAGGAGAAGGGAAAGGCAGGAAAACCACTaGACTGAGTTCCCAGTCTTTAACAGGACTCCCTGCTGGCAGATT | + |
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Preference number: 1 (lower is better) Translates to: SITIDQRRRERQENH*TEFPVFNRTPCWQI Trigger: AATCTGCCAGCAGGGAGTCCTGTTAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCTCCTTTGGTCTATAGTGATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGAGGTCAGATACAGACAGACGGGGACAGGCCCTGCACACAGCAGGAGGGGGGGAATGCTGGTGAGTaGCTTCTCATCAGGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PRGQIQTDGDRPCTQQEGGNAGE*LLIRRS Trigger: TGACCTCCTGATGAGAAGCCACTCACCAGCATTCCC...CCCCTCCTGCTGTGTGCAGGGCCTGTCCCCGTCTGTCTGTATCTGACCTCTAGG 59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAATGCTGGTGAGTGGCTTCTCATCAGGAGGTCAGGCCAGAGGCTGGGTCTCGCGTGTGAGCCTCTCTaGGCCCTCCAGGTTAAATAT | + |
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Preference number: 2 (lower is better) Translates to: GNAGEWLLIRRSGQRLGLACEPL*ALQVKY Trigger: ATATTTAACCTGGAGGGCTCAGAGAGGCTCACACGC...GAGACCCAGCCTCTGGCCTGACCTCCTGATGAGAAGCCACTCACCAGCATTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTTAGCCATGAAACGAATGGCATTACATGCTTCTGACCTCCCCTCTCAGCCAGACGGGGACAGGCCCTaGACACAGCAGGAGGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: CLAMKRMALHASDLPSQPDGDRP*TQQEGA Trigger: AGCCCCCTCCTGCTGTGTGCAGGGCCTGTCCCCGTC...TGGCTGAGAGGGGAGGTCAGAAGCATGTAATGCCATTCGTTTCATGGCTAAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAGGAGAAGGGAAAGGCAGGAAAACCACTGCACTGAGTTCCCAGTCTTTAGGCATTACATGCTTCTaGCCTCCCCTCTCAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: TKGEGKGRKTTALSSQSLGITCF*PPLSAN Trigger: GTTGGCTGAGAGGGGAGGTCAGAAGCATGTAATGCC...TAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCTCCTTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGAAAGGCAGGAAAACCACTGCACTGAGTTCCCAGTCTTTAACAGGACTACTTGGAAACCACAGTaGAGGCGGTATCACTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: RRERQENHCTEFPVFNRTTWKPQ*RRYHSA Trigger: CGCTGAGTGATACCGCCTTCACTGTGGTTTCCAAGT...AGTCCTGTTAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGAAAGGCAGGAAAACCACTGCACTGAGTTCCCAGTCTTTAACAGGACTGAATGGGAATGCTGGTaGGTGGCTTCTCATCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RRERQENHCTEFPVFNRTEWECW*VASHQE Trigger: CTCCTGATGAGAAGCCACTCACCAGCATTCCCATTC...AGTCCTGTTAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTATTGCTGTCAGTATCACTATAGACCAAAGGAGAAGGGAAAGGCAGGAAAAGCCTCCTGTCCCCAGTaGCTGCCTAGGATGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LYCCQYHYRPKEKGKAGKASCPQ*LPRMQD Trigger: GTCCTGCATCCTAGGCAGGCACTGGGGACAGGAGGC...TTTTCCTGCCTTTCCCTTCTCCTTTGGTCTATAGTGATACTGACAGCAATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGGAAAGGCAGGAAAACCACTGCACTGAGTTCCCAGTCTTTAACAGGACTAAAGATCCCAGGCATTaGAGCTGCAAGAGACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RRERQENHCTEFPVFNRTKDPRH*SCKRPQ Trigger: CTGGGGTCTCTTGCAGCTGCAATGCCTGGGATCTTT...AGTCCTGTTAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCAGTATCACTATAGACCAAAGGAGAAGGGAAAGGCAGGAAAACCACTGCAGAGCAAAGGAGACCTaGCTTTTCCCCAGTCACCTT | + |
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Preference number: 2 (lower is better) Translates to: AVSITIDQRRRERQENHCRAKET*LFPSHL Trigger: AAGGTGACTGGGGAAAAGGCAGGTCTCCTTTGCTCT...GCAGTGGTTTTCCTGCCTTTCCCTTCTCCTTTGGTCTATAGTGATACTGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR TCA 90 bp | TATTGCTGTCAGTATCACTATAGACCAAAGGAGAAGGGAAAGGCAGGAAAACCAACATTACAACACCTCTaGCATGCAACCCTGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: YCCQYHYRPKEKGKAGKPTLQHL*HATLWA Trigger: GGCCCACAGGGTTGCATGTCAGAGGTGTTGTAATGT...TGGTTTTCCTGCCTTTCCCTTCTCCTTTGGTCTATAGTGATACTGACAGCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR GCA 90 bp | CCAACAGTACTTGTTAGGGCAAATGAACTCCTTTCTGCTGAGCTGAGGTCTTCAACACACACATCCATTTaGAGACCACAAGCAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: PTVLVRANELLSAELRSSTHTSI*RPQAMP Trigger: TGGCATTGCTTGTGGTCTGCAAATGGATGTGTGTGT...TGAAGACCTCAGCTCAGCAGAAAGGAGTTCATTTGCCCTAACAAGTACTGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTAGCCATGAAACGAATGGCATTACATGCTTCTGACCTCCCCTCTCAGCCAAATAGACCAACTTTCTaGAGACAGTTCTCTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: CLAMKRMALHASDLPSQPNRPTF*RQFSSE Trigger: TTCTGAAGAGAACTGTCTTCAGAAAGTTGGTCTATT...TGGCTGAGAGGGGAGGTCAGAAGCATGTAATGCCATTCGTTTCATGGCTAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTATTGCTGTCAGTATCACTATAGACCAAAGGAGAAGGGAAAGGCAGGAAAAACTAATGTCATCAACTaGCCTAGAGGTCAGATACAG | + |
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Preference number: 2 (lower is better) Translates to: LYCCQYHYRPKEKGKAGKTNVIN*PRGQIQ Trigger: CTGTATCTGACCTCTAGGTCAGTTGATGACATTAGT...TTTTCCTGCCTTTCCCTTCTCCTTTGGTCTATAGTGATACTGACAGCAATACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR GCA 72 bp | CATTACAACACCTCTGACATGCAACCCTGTGGGCCCTaGCATACGCATCCCGTTAGCAGTGAGGTCATGGAC | + |
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Preference number: 3 (lower is better) Translates to: HYNTSDMQPCGP*HTHPVSSEVMD Trigger: GTCCATGACCTCACTGCTAACGGGATGCGTATGGCAGGGCCCACAGGGTTGCATGTCAGAGGTGTTGTAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR GCA 72 bp | AGCAGACACACACATCCATTTGCAGACCACAAGCAATaGCACGAGCTCACCACACACAAAGGTTCCCGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SRHTHPFADHKQ*HELTTHKGSRP Trigger: TGGGCGGGAACCTTTGTGTGTGGTGAGCTCGTGGCATTGCTTGTGGTCTGCAAATGGATGTGTGTGTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR GCA 72 bp | TGGGTCTCTCCCTGTAACATTACAACACCTCTGACATaGAACCCTGTGGGCCCTGCCATACGCATCCCGTTA | + |
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Preference number: 3 (lower is better) Translates to: WVSPCNITTPLT*NPVGPAIRIPL Trigger: TAACGGGATGCGTATGGCAGGGCCCACAGGGTTGCATGTCAGAGGTGTTGTAATGTTACAGGGAGAGACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR CCA 72 bp | GTGAGTGGCTTCTCATCAGGAGGTCAGGCCAGAGGCTaGGTCTCTCCCTGTAACATTACAACACCTCTGACA | + |
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Preference number: 3 (lower is better) Translates to: VSGFSSGGQARG*VSPCNITTPLT Trigger: TGTCAGAGGTGTTGTAATGTTACAGGGAGAGACCCAGCCTCTGGCCTGACCTCCTGATGAGAAGCCACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGTCAGTATCACTATAGACCAAAGGAGAAGGGAAAGGCAGGAAAACCACTGCCCGCTGAGGCCTCACTaGGAAACCACAGTGAAGGCG | + |
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Preference number: 3 (lower is better) Translates to: AVSITIDQRRRERQENHCPLRPH*ETTVKA Trigger: CGCCTTCACTGTGGTTTCCAAGTGAGGCCTCAGCGG...GCAGTGGTTTTCCTGCCTTTCCCTTCTCCTTTGGTCTATAGTGATACTGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR TCA 72 bp | CAGGTGAAGGCATACAGGGCCCTCAATAACGCACACTaGACACTGTTCTCTTCTGAAGCCATCTCAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: QVKAYRALNNAH*TLFSSEAISRD Trigger: GTCCCTTGAGATGGCTTCAGAAGAGAACAGTGTTCAGTGTGCGTTATTGAGGGCCCTGTATGCCTTCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR GCA 72 bp | CACAGGGACATTAGGAAGCAGACACACACATCCATTTaGAGACCACAAGCAATGCCACGAGCTCACCACACA | + |
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Preference number: 3 (lower is better) Translates to: HRDIRKQTHTSI*RPQAMPRAHHT Trigger: TGTGTGGTGAGCTCGTGGCATTGCTTGTGGTCTGCAAATGGATGTGTGTGTCTGCTTCCTAATGTCCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR CCA 72 bp | GCTGCAAGTGCCAACAGCAGAGTTTACATAAAGCATTaGGAAAGCCAACCTCGGCAAGTCACACACCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: AASANSRVYIKH*ESQPRQVTHPS Trigger: GCTTGGGTGTGTGACTTGCCGAGGTTGGCTTTCCCAATGCTTTATGTAAACTCTGCTGTTGGCACTTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR GCA 72 bp | ATAGACCAAAGGAGAAGGGAAAGGCAGGAAAACCACTaGACTGAGTTCCCAGTCTTTAACAGGACTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: IDQRRRERQENH*TEFPVFNRTPC Trigger: GCAGGGAGTCCTGTTAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCTCCTTTGGTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR-3UTR CAA 90 bp | AGAAGGGAAAGGCAGGAAAACCACTGCACTGAGTTCCCAGTCTTTAACAGGACTACCAGCAAAGACAGCTaGCTTTTCACACAGGGACAT | + |
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Preference number: 3 (lower is better) Translates to: RRERQENHCTEFPVFNRTTSKDS*LFTQGH Trigger: ATGTCCCTGTGTGAAAAGCAAGCTGTCTTTGCTGGT...AGTCCTGTTAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR TCA 72 bp | TACTTGTTAGGGCAAATGAACTCCTTTCTGCTGAGCTaGGGTCTTCAAGAAACCGTAGACAAACAGCAATCT | + |
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Preference number: 3 (lower is better) Translates to: YLLGQMNSFLLS*GLQETVDKQQS Trigger: AGATTGCTGTTTGTCTACGGTTTCTTGAAGACCTCAGCTCAGCAGAAAGGAGTTCATTTGCCCTAACAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| 3UTR TCA 72 bp | GCCTTTTCCCCAGTCACCTTAAATAGACCAACTTTCTaGAGACAGTTCTCTTCAGAAATTAAATGTTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: AFSPVTLNRPTF*RQFSSEIKCLE Trigger: CTCCAAACATTTAATTTCTGAAGAGAACTGTCTTCAGAAAGTTGGTCTATTTAAGGTGACTGGGGAAAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CCA 90 bp | CCTAGAGGTCAGATACAGACAGACGGGGACAGGCCCTGCACACAGCAGGAGGGGTGTCCAGGAAGACATTaGCTGGCTTCAGGTCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PRGQIQTDGDRPCTQQEGCPGRH*LASGPG Trigger: ACCGGGACCTGAAGCCAGCCAATGTCTTCCTGGACA...CCCCTCCTGCTGTGTGCAGGGCCTGTCCCCGTCTGTCTGTATCTGACCTCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR GCA 90 bp | CAGACCACAAGCAATGCCACGAGCTCACCACACACAAAGGTTCCCGCCCACAGATCTCGATCCTGCAGTTaGCTTTCCTTCAACTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QTTSNATSSPHTKVPAHRSRSCS*LSFNLS Trigger: GCTCAAGTTGAAGGAAAGGCAACTGCAGGATCGAGA...TCTGTGGGCGGGAACCTTTGTGTGTGGTGAGCTCGTGGCATTGCTTGTGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGGAAAGGCAGGAAAACCACTGCACTGAGTTCCCAGTCTTTAACAGGACTGCCTTTCCTTCAACTTaGGCTCGCTCAGCACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: RRERQENHCTEFPVFNRTAFPST*ARSAQG Trigger: GCCCTGTGCTGAGCGAGCTCAAGTTGAAGGAAAGGC...AGTCCTGTTAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CCA 90 bp | GGGACATTAGGAAGCAGACACACACATCCATTTGCAGACCACAAGCAATGCCACTCAGGCTCTCGGCTCTaGCCAGTTTGTCCTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: GTLGSRHTHPFADHKQCHSGSRL*PVCPLQ Trigger: TTGCAGAGGACAAACTGGCCAGAGCCGAGAGCCTGA...GTGGCATTGCTTGTGGTCTGCAAATGGATGTGTGTGTCTGCTTCCTAATGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGGAAAGGCAGGAAAACCACTGCACTGAGTTCCCAGTCTTTAACAGGACTAGGGCCAGCGTCAACTaGGTCATCACTCGAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: RRERQENHCTEFPVFNRTRASVN*VITRRT Trigger: TGTCCTTCGAGTGATGACTCAGTTGACGCTGGCCCT...AGTCCTGTTAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR TCA 90 bp | AACGAATGGCATTACATGCTTCTGACCTCCCCTCTCAGCCAACAGTACTTGTTACCATCGCTCCTTCTGTaGCACTCTTTCAGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NEWHYMLLTSPLSQQYLLPSLLL*HSFRAS Trigger: GCTGGCCCTGAAAGAGTGTCACAGAAGGAGCGATGG...TAACAAGTACTGTTGGCTGAGAGGGGAGGTCAGAAGCATGTAATGCCATTCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR TCA 90 bp | ATCAAAAGCCCAACCAACCAGCAAAGACAGCTTGCTTTTCACACAGGGACATTACGCAGCTGGGCAGCATaGAGCCTCTTCTTCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: IKSPTNQQRQLAFHTGTLRSWAA*SLFFRS Trigger: GGACCTGAAGAAGAGGCTTCATGCTGCCCAGCTGCG...TAATGTCCCTGTGTGAAAAGCAAGCTGTCTTTGCTGGTTGGTTGGGCTTTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CCA 90 bp | AAGCCCAACCAACCAGCAAAGACAGCTTGCTTTTCACACAGGGACATTAGGAAGCAGGAAGACATTGGCTaGCTTCAGGTCCCGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: KPNQPAKTACFSHRDIRKQEDIG*LQVPVK Trigger: CTTCACCGGGACCTGAAGCCAGCCAATGTCTTCCTG...CTTCCTAATGTCCCTGTGTGAAAAGCAAGCTGTCTTTGCTGGTTGGTTGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR GCA 90 bp | CCAACAGTACTTGTTAGGGCAAATGAACTCCTTTCTGCTGAGCTGAGGTCTTCAAGTTCACGTTCCTTCTaGTCCAGGATGTCCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: PTVLVRANELLSAELRSSSSRSF*SRMSSR Trigger: TCGGGAGGACATCCTGGAGCAGAAGGAACGTGAACT...TGAAGACCTCAGCTCAGCAGAAAGGAGTTCATTTGCCCTAACAAGTACTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR TCA 90 bp | CAGAATTTTAAAATGCAAGGAGTCTGTGTGTTTAGCCATGAAACGAATGGCATTGGCTTCAGGTCCCGGTaGAGCACAGTGTGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: QNFKMQGVCVFSHETNGIGFRSR*STVWPP Trigger: TGGTGGCCACACTGTGCTTCACCGGGACCTGAAGCC...AATGCCATTCGTTTCATGGCTAAACACACAGACTCCTTGCATTTTAAAATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGGAAAGGCAGGAAAACCACTGCACTGAGTTCCCAGTCTTTAACAGGACTCTTCTTCTTCATGGCTaGGGATGGAAGATCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RRERQENHCTEFPVFNRTLLLHG*GWKIKF Trigger: GAACTTGATCTTCCATCCTCAGCCATGAAGAAGAAG...AGTCCTGTTAAAGACTGGGAACTCAGTGCAGTGGTTTTCCTGCCTTTCCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR TCA 90 bp | AACGAATGGCATTACATGCTTCTGACCTCCCCTCTCAGCCAACAGTACTTGTTACTTTCCCCGTGGAAATaGACCTTCTTCTTCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: NEWHYMLLTSPLSQQYLLLSPWK*TFFFMA Trigger: AGCCATGAAGAAGAAGGTTCATTTCCACGGGGAAAG...TAACAAGTACTGTTGGCTGAGAGGGGAGGTCAGAAGCATGTAATGCCATTCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CCA 90 bp | ATCAAAAGCCCAACCAACCAGCAAAGACAGCTTGCTTTTCACACAGGGACATTACCAGCTAGCTCTTTTTaGTTGAAAGCTGTAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: IKSPTNQQRQLAFHTGTLPASSF*LKAVKG Trigger: TCCCTTTACAGCTTTCAACCAAAAAGAGCTAGCTGG...TAATGTCCCTGTGTGAAAAGCAAGCTGTCTTTGCTGGTTGGTTGGGCTTTTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR GCA 90 bp | AAGGCACAGAATTTTAAAATGCAAGGAGTCTGTGTGTTTAGCCATGAAACGAATTCAGACACAAGCATCTaGTTCTCCACCTCCGTCATG | + |
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Preference number: 4 (lower is better) Translates to: KAQNFKMQGVCVFSHETNSDTSI*FSTSVM Trigger: CATGACGGAGGTGGAGAAGCAGATGCTTGTGTCTGA...ATTCGTTTCATGGCTAAACACACAGACTCCTTGCATTTTAAAATTCTGTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR GCA 90 bp | CAGAATTTTAAAATGCAAGGAGTCTGTGTGTTTAGCCATGAAACGAATGGCATTGCTTGCTCTCGATCCTaGAGTTGCCTTTCCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: QNFKMQGVCVFSHETNGIACSRS*SCLSFN Trigger: GTTGAAGGAAAGGCAACTGCAGGATCGAGAGCAAGC...AATGCCATTCGTTTCATGGCTAAACACACAGACTCCTTGCATTTTAAAATTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR GCA 90 bp | GCACAGAATTTTAAAATGCAAGGAGTCTGTGTGTTTAGCCATGAAACGAATGGCTTGCGGTGTTCTCTTTaGTTTCCCCGTGGAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: AQNFKMQGVCVFSHETNGLRCSL*FPRGNE Trigger: TTCATTTCCACGGGGAAAGCAAAGAGAACACCGCAA...GCCATTCGTTTCATGGCTAAACACACAGACTCCTTGCATTTTAAAATTCTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS GCA 90 bp | TCACGTTCCTTCTGCTCCAGGATGTCCTCCCGAGCTCTGAGTGCTTaGTCTCGATCCTGCAGTTGCCTTTCCTTCAACTTGAGCTCGCTC | + |
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Preference number: 5 (lower is better) Translates to: SRSFCSRMSSRALSA*SRSCSCLSFNLSSL Trigger: GAGCGAGCTCAAGTTGAAGGAAAGGCAACTGCAGGATCGAGAGCAAGCACTCAGAGCTCGGGAGGACATCCTGGAGCAGAAGGAACGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS GCA 90 bp | AAGTTCACGTTCCTTCTGCTCCAGGATGTCCTCCCGAGCTCTGAGTaGTTGCTCTCGATCCTGCAGTTGCCTTTCCTTCAACTTGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: KFTFLLLQDVLPSSE*LLSILQLPFLQLEL Trigger: GAGCTCAAGTTGAAGGAAAGGCAACTGCAGGATCGAGAGCAAGCACTCAGAGCTCGGGAGGACATCCTGGAGCAGAAGGAACGTGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS GCA 90 bp | TTGTCCTCTGCAAGTCTCTCTCGAATACAAAGTTCACGTTCCTTCTaGTCCAGGATGTCCTCCCGAGCTCTGAGTGCTTGCTCTCGATCC | + |
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Preference number: 5 (lower is better) Translates to: LSSASLSRIQSSRSF*SRMSSRALSACSRS Trigger: GGATCGAGAGCAAGCACTCAGAGCTCGGGAGGACATCCTGGAGCAGAAGGAACGTGAACTTTGTATTCGAGAGAGACTTGCAGAGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CAA 90 bp | TTGTATTGCTGTCAGTATCACTATAGACCAAAGGAGAAGGGAAAGGCAGGAAAACCGAGCTCTGAGTGCTaGCTCTCGATCCTGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LYCCQYHYRPKEKGKAGKPSSEC*LSILQL Trigger: CAACTGCAGGATCGAGAGCAAGCACTCAGAGCTCGG...TTTTCCTGCCTTTCCCTTCTCCTTTGGTCTATAGTGATACTGACAGCAATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CAA 90 bp | CCAACAGTACTTGTTAGGGCAAATGAACTCCTTTCTGCTGAGCTGAGGTCTTCAGCTAGCTCTTTTTGGTaGAAAGCTGTAAAGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PTVLVRANELLSAELRSSASSFW*KAVKGG Trigger: GCCTCCCTTTACAGCTTTCAACCAAAAAGAGCTAGC...TGAAGACCTCAGCTCAGCAGAAAGGAGTTCATTTGCCCTAACAAGTACTGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CAA 90 bp | GCACAGAATTTTAAAATGCAAGGAGTCTGTGTGTTTAGCCATGAAACGAATGGCTCCCCCAGCTTGACATaGTGTTTGCTGTCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AQNFKMQGVCVFSHETNGSPSLT*CLLSRK Trigger: CTTCCTGGACAGCAAACACAATGTCAAGCTGGGGGA...GCCATTCGTTTCATGGCTAAACACACAGACTCCTTGCATTTTAAAATTCTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CAA 90 bp | TTGTATTGCTGTCAGTATCACTATAGACCAAAGGAGAAGGGAAAGGCAGGAAAACCAAAGTCCCCCAGCTaGACATTGTGTTTGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LYCCQYHYRPKEKGKAGKPKSPS*TLCLLS Trigger: GGACAGCAAACACAATGTCAAGCTGGGGGACTTTGG...TTTTCCTGCCTTTCCCTTCTCCTTTGGTCTATAGTGATACTGACAGCAATACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CAA 90 bp | AAGGCACAGAATTTTAAAATGCAAGGAGTCTGTGTGTTTAGCCATGAAACGAATAGCTTGACATTGTGTTaGCTGTCCAGGAAGACATTG | + |
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Preference number: 5 (lower is better) Translates to: KAQNFKMQGVCVFSHETNSLTLC*LSRKTL Trigger: CAATGTCTTCCTGGACAGCAAACACAATGTCAAGCT...ATTCGTTTCATGGCTAAACACACAGACTCCTTGCATTTTAAAATTCTGTGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS-3UTR CAA 90 bp | CAGAATTTTAAAATGCAAGGAGTCTGTGTGTTTAGCCATGAAACGAATGGCATTCAGAATTCTCACTCCTaGCGGTGTTCTCTTTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: QNFKMQGVCVFSHETNGIQNSHS*RCSLCF Trigger: AAAGCAAAGAGAACACCGCAAGGAGTGAGAATTCTG...AATGCCATTCGTTTCATGGCTAAACACACAGACTCCTTGCATTTTAAAATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS GCA 72 bp | GAATCTTCTGACAGCGGCCGTAGGAGCCGGTGCCGATaGTGTGCAGCACCTCGTAGTCCTCCACCCGGGACG | + |
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Preference number: 6 (lower is better) Translates to: ESSDSGRRSRCR*CAAPRSPPPGT Trigger: CGTCCCGGGTGGAGGACTACGAGGTGCTGCACAGCATCGGCACCGGCTCCTACGGCCGCTGTCAGAAGATTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS GCA 72 bp | TCCTCCGAATCTTCTGACAGCGGCCGTAGGAGCCGGTaGCGATGCTGTGCAGCACCTCGTAGTCCTCCACCC | + |
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Preference number: 6 (lower is better) Translates to: SSESSDSGRRSR*RCCAAPRSPPP Trigger: GGGTGGAGGACTACGAGGTGCTGCACAGCATCGGCACCGGCTCCTACGGCCGCTGTCAGAAGATTCGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS CAA 90 bp | TTCACGTTCCTTCTGCTCCAGGATGTCCTCCCGAGCTCTGAGTGCTaGCTCTCGATCCTGCAGTTGCCTTTCCTTCAACTTGAGCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: FTFLLLQDVLPSSEC*LSILQLPFLQLELA Trigger: AGCGAGCTCAAGTTGAAGGAAAGGCAACTGCAGGATCGAGAGCAAGCACTCAGAGCTCGGGAGGACATCCTGGAGCAGAAGGAACGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS GCA 72 bp | TTCCTTCTGCTCCAGGATGTCCTCCCGAGCTCTGAGTaGTTGCTCTCGATCCTGCAGTTGCCTTTCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: FLLLQDVLPSSE*LLSILQLPFLQ Trigger: TTGAAGGAAAGGCAACTGCAGGATCGAGAGCAAGCACTCAGAGCTCGGGAGGACATCCTGGAGCAGAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS CAA 72 bp | CTTCTGCTCCAGGATGTCCTCCCGAGCTCTGAGTGCTaGCTCTCGATCCTGCAGTTGCCTTTCCTTCAACTT | + |
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Preference number: 6 (lower is better) Translates to: LLLQDVLPSSEC*LSILQLPFLQL Trigger: AAGTTGAAGGAAAGGCAACTGCAGGATCGAGAGCAAGCACTCAGAGCTCGGGAGGACATCCTGGAGCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS GCA 72 bp | GCAAGTCTCTCTCGAATACAAAGTTCACGTTCCTTCTaGTCCAGGATGTCCTCCCGAGCTCTGAGTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ASLSRIQSSRSF*SRMSSRALSAC Trigger: GCAAGCACTCAGAGCTCGGGAGGACATCCTGGAGCAGAAGGAACGTGAACTTTGTATTCGAGAGAGACTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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| CDS CAA 72 bp | AATATTCTAGCTAGTCCAAAGTCCCCCAGCTTGACATaGTGTTTGCTGTCCAGGAAGACATTGGCTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: NILASPKSPSLT*CLLSRKTLAGF Trigger: GAAGCCAGCCAATGTCTTCCTGGACAGCAAACACAATGTCAAGCTGGGGGACTTTGGACTAGCTAGAATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027931.8 |
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