Pregenerated sensors for NEK11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035032Ensembl transcript IDs: ENSMUST00000038648.11, ENSMUST00000140851.3, ENSMUST00000156256.8, ENSMUST00000177029.8
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTGGGTGTACAGAGACCCTCCTCAGTGGGCAGGTACTGCAGTATaGAGGACAGCCTGCCCTCCTGCACTGACTAGCCTAGCCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: SWVYRDPPQWAGTAV*RTACPPALTSLALP Trigger: GGGAAGGGCTAGGCTAGTCAGTGCAGGAGGGCAGGCTGTCCTGCATACTGCAGTACCTGCCCACTGAGGAGGGTCTCTGTACACCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR GCA 90 bp | CACTGGTCAGGCACTGGGCTTGCCCTGGATGGACGCAGTACTGAGTaGCTGTGTCTTCAGAGTGCTCCCAGCATACTGGAAACCCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: HWSGTGLALDGRSTE*LCLQSAPSILETPR Trigger: CCTCGGGGTTTCCAGTATGCTGGGAGCACTCTGAAGACACAGGCACTCAGTACTGCGTCCATCCAGGGCAAGCCCAGTGCCTGACCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| 3UTR CCA 90 bp | AGAGATACCTGCAGCACTTCCTGGGTGTACAGAGACCCTCCTCAGTaGGCAGGTACTGCAGTATGCAGGACAGCCTGCCCTCCTGCACTG | + |
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Preference number: 1 (lower is better) Translates to: RDTCSTSWVYRDPPQ*AGTAVCRTACPPAL Trigger: CAGTGCAGGAGGGCAGGCTGTCCTGCATACTGCAGTACCTGCCCACTGAGGAGGGTCTCTGTACACCCAGGAAGTGCTGCAGGTATCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR CCA 90 bp | GTGCCCTTGACCGGCTTCTTCTGGGCAGCTTCACAGGGCAGGTTCTaGAGAGAGGGCTCTTTTCCTTCCATGGTCAGCAGCAACTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: VPLTGFFWAASQGRF*REGSFPSMVSSNSS Trigger: TGAGGAGTTGCTGCTGACCATGGAAGGAAAAGAGCCCTCTCTCCAGAACCTGCCCTGTGAAGCTGCCCAGAAGAAGCCGGTCAAGGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR CCA 90 bp | CTCTCTCATCGGCTGCCTGCAGCTTCCTCAGCCACATCCGTTCTCTaGGAGTCGTTTTCTGCGTGTCAGACAAGGCTTGCAGAGTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: LSHRLPAASSATSVL*ESFSACQTRLAESA Trigger: TGCAGACTCTGCAAGCCTTGTCTGACACGCAGAAAACGACTCCCAGAGAACGGATGTGGCTGAGGAAGCTGCAGGCAGCCGATGAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR GCA 90 bp | TCAACTTCAAAGCAGTCACTGGCCCGAGGAACCACCGTCTCCAGATaGTCCCAGATCTCTGCTTCTCTGGCATTCTGGTGCCTTGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: STSKQSLARGTTVSR*SQISASLAFWCLAL Trigger: GAGAGCAAGGCACCAGAATGCCAGAGAAGCAGAGATCTGGGAGCATCTGGAGACGGTGGTTCCTCGGGCCAGTGACTGCTTTGAAGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR CCA 90 bp | CTGGGATCTCATAATGTCCGAGGTCAACAATGGTGTCCTCTAAACTaGGCTCAAGTTCATCGAGGTCCAGGCACGGAAGGGACTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LGSHNVRGQQWCPLN*AQVHRGPGTEGTEA Trigger: AGCCTCAGTCCCTTCCGTGCCTGGACCTCGATGAACTTGAGCCCAGTTTAGAGGACACCATTGTTGACCTCGGACATTATGAGATCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR CCA 90 bp | CTGAGTTCAGAGTCTATTCAGCACCGTGGACAGCTACACGTCTTCTaGCCAGAGCAGGAGGGGCTGTACCTGTTGGTTTGTTCTGTACAC | + |
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Preference number: 1 (lower is better) Translates to: LSSESIQHRGQLHVF*PEQEGLYLLVCSVH Trigger: GTGTACAGAACAAACCAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACGTGTAGCTGTCCACGGTGCTGAATAGACTCTGAACTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR GCA 90 bp | CTCCAGATGCTCCCAGATCTCTGCTTCTCTGGCATTCTGGTGCCTTaGTCTCTTGAGGTAATCGTAGACCTCCTCAAACGTTTCCATTCC | + |
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Preference number: 1 (lower is better) Translates to: LQMLPDLCFSGILVP*SLEVIVDLLKRFHS Trigger: GGAATGGAAACGTTTGAGGAGGTCTACGATTACCTCAAGAGAGCAAGGCACCAGAATGCCAGAGAAGCAGAGATCTGGGAGCATCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR CCA 90 bp | CAACAAGTGGGTCTTCTGGGATCTCATAATGTCCGAGGTCAACAATaGTGTCCTCTAAACTGGGCTCAAGTTCATCGAGGTCCAGGCACG | + |
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Preference number: 1 (lower is better) Translates to: QQVGLLGSHNVRGQQ*CPLNWAQVHRGPGT Trigger: CGTGCCTGGACCTCGATGAACTTGAGCCCAGTTTAGAGGACACCATTGTTGACCTCGGACATTATGAGATCCCAGAAGACCCACTTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR TCA 90 bp | CAGCCGACGGTCTCAATGAAGGACTCTTGTTCAACATGCGTTCCATaGTGGTGTTTAGTTCTCGTGGATATCTGTCCGGGAGTGAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: QPTVSMKDSCSTCVP*WCLVLVDICPGVKV Trigger: CACCTTCACTCCCGGACAGATATCCACGAGAACTAAACACCATCATGGAACGCATGTTGAACAAGAGTCCTTCATTGAGACCGTCGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR TCA 90 bp | GCTCCCAGATCTCTGCTTCTCTGGCATTCTGGTGCCTTGCTCTCTTaGGGTAATCGTAGACCTCCTCAAACGTTTCCATTCCTAGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: APRSLLLWHSGALLS*GNRRPPQTFPFLAS Trigger: AGAAGCTAGGAATGGAAACGTTTGAGGAGGTCTACGATTACCTCAAGAGAGCAAGGCACCAGAATGCCAGAGAAGCAGAGATCTGGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR CCA 90 bp | ACATGTTCCAAACACCCAACCAGCGCGGCAGTATCACTGTCCTGTTaGTTTGTTCTGTACACAGATGGGGATTCCTCCTCTTTCGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: TCSKHPTSAAVSLSC*FVLYTDGDSSSFVS Trigger: AGACACGAAAGAGGAGGAATCCCCATCTGTGTACAGAACAAACCAACAGGACAGTGATACTGCCGCGCTGGTTGGGTGTTTGGAACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR TCA 90 bp | GTACACAGATGGGGATTCCTCCTCTTTCGTGTCTCCTCCTGCTTCTaGGAATATCATTTCTTCCTCCTGCTCCTCGCTGTCTTCAGAACA | + |
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Preference number: 1 (lower is better) Translates to: VHRWGFLLFRVSSCF*EYHFFLLLLAVFRT Trigger: TGTTCTGAAGACAGCGAGGAGCAGGAGGAAGAAATGATATTCTCAGAAGCAGGAGGAGACACGAAAGAGGAGGAATCCCCATCTGTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR GCA 90 bp | GGTCCTGATCAGAGTCTGATAAGTCTATGGGGGCCTGTCTGCCTCTaGCTCTCAAAAGCAAAGACTCTTGTACATGGAGCCATTAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: GPDQSLISLWGPVCL*LSKAKTLVHGAIRK Trigger: CTTTCTAATGGCTCCATGTACAAGAGTCTTTGCTTTTGAGAGGCAGAGGCAGACAGGCCCCCATAGACTTATCAGACTCTGATCAGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR TCA 90 bp | AGCAACCTGACACCAACTCCAGTTTCAAGACTTCTACTCTTAGCCTaGGTTCAGAGTCTATTCAGCACCGTGGACAGCTACACGTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SNLTPTPVSRLLLLA*VQSLFSTVDSYTSS Trigger: AGAAGACGTGTAGCTGTCCACGGTGCTGAATAGACTCTGAACTCAGGCTAAGAGTAGAAGTCTTGAAACTGGAGTTGGTGTCAGGTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR CCA 90 bp | CATGCGCTTCATCTTGGTCCGAGCCACTGCACTGTTGAAAACCATTaGTCCAGGAGACATGTCTGTCACTGCATTGGTAATAGTCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: HALHLGPSHCTVENH*SRRHVCHCIGNSLC Trigger: ACAAAGACTATTACCAATGCAGTGACAGACATGTCTCCTGGACCAATGGTTTTCAACAGTGCAGTGGCTCGGACCAAGATGAAGCGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR TCA 90 bp | TTTCTGCACGGCATTAATCGTATGAGCAGCCTCCTTCTGACAAACTaGGTTCTTGTCTTCCAGTGTCATCTCTGGGTATTTACACATCAG | + |
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Preference number: 1 (lower is better) Translates to: FLHGINRMSSLLLTN*VLVFQCHLWVFTHQ Trigger: CTGATGTGTAAATACCCAGAGATGACACTGGAAGACAAGAACTCAGTTTGTCAGAAGGAGGCTGCTCATACGATTAATGCCGTGCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR TCA 90 bp | ACAATATTCAAAACCACAGACAAGAAACTGGAGCCAGCAAATGCATaGTCCAGGCAACACATCTCATATAAAATGCATGCCAGTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: TIFKTTDKKLEPANA*SRQHISYKMHASDQ Trigger: CTGGTCACTGGCATGCATTTTATATGAGATGTGTTGCCTGGATCATGCATTTGCTGGCTCCAGTTTCTTGTCTGTGGTTTTGAATATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR CCA 90 bp | AGAACAGGAATCAAAGACATCGGAATAATATTGTTCAGCAACAAGTaGGTCTTCTGGGATCTCATAATGTCCGAGGTCAACAATGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: RTGIKDIGIILFSNK*VFWDLIMSEVNNGV Trigger: GACACCATTGTTGACCTCGGACATTATGAGATCCCAGAAGACCCACTTGTTGCTGAACAATATTATTCCGATGTCTTTGATTCCTGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGCTCAAGTTCATCGAGGTCCAGGCACGGAAGGGACTGAGGCTCAGGCAGGCCTCTCATCGGCTGCCTaGAGCTTCCTCAGCCACATC | + |
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Preference number: 2 (lower is better) Translates to: WAQVHRGPGTEGTEAQAGLSSAA*SFLSHI Trigger: GATGTGGCTGAGGAAGCTGCAGGCAGCCGATGAGAG...GCCTGCCTGAGCCTCAGTCCCTTCCGTGCCTGGACCTCGATGAACTTGAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR-3UTR TCA 90 bp | CGTCTTCTGGCCAGAGCAGGAGGGGCTGTACCTGTTGGTTTGTTCTGTACACAGAGGCACGGAAGGGACTaGGGCTCAGGCAGGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RLLARAGGAVPVGLFCTQRHGRD*GSGRLS Trigger: GGAGAGCCTGCCTGAGCCTCAGTCCCTTCCGTGCCT...CTGTGTACAGAACAAACCAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR CAA 90 bp | CAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGGCACTGGGCTaGCCCTGGATGGACGCAGTACTGAGTGCCTGTGTCTTCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: QLAIVPGAHTGQALG*PWMDAVLSACVFRV Trigger: CACTCTGAAGACACAGGCACTCAGTACTGCGTCCATCCAGGGCAAGCCCAGTGCCTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| 3UTR-3UTR CCA 90 bp | CGAGGTCCAGGCACGGAAGGGACTGAGGCTCAGGCAGGCTCTCCAAAGTCCGTTTCTTTTTCAGCCTCCTaGCTCTCTCATCGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RGPGTEGTEAQAGSPKSVSFSAS*LSHRLP Trigger: AGGCAGCCGATGAGAGAGCCAGGAGGCTGAAAAAGA...AACGGACTTTGGAGAGCCTGCCTGAGCCTCAGTCCCTTCCGTGCCTGGACCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGGCACTGGGCGAGGGCTGTACGTCTaGGGGAAAGCTTTCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: CHKPASHSPWSSHWSGTGRGLYV*GKAFRM Trigger: CATCCTGAAAGCTTTCCCTCAGACGTACAGCCCTCG...CCCAGTGCCTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTCCTGGGTGTACAGAGACCCTCCTCAGTGGGCAGGTACTGCAGTATGCCTCTCATCGGCTGCCTaGAGCTTCCTCAGCCACATC | + |
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Preference number: 2 (lower is better) Translates to: STSWVYRDPPQWAGTAVCLSSAA*SFLSHI Trigger: GATGTGGCTGAGGAAGCTGCAGGCAGCCGATGAGAG...GCATACTGCAGTACCTGCCCACTGAGGAGGGTCTCTGTACACCCAGGAAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGGCACGGAAGGGACTGAGGCTCAGGCAGGCTCTCCAAAGTCCGTTCATCAGCCGACGGTCTCAATaGAGGACTCTTGTTCAACAT | + |
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Preference number: 2 (lower is better) Translates to: VQARKGLRLRQALQSPFISRRSQ*RTLVQH Trigger: ATGTTGAACAAGAGTCCTTCATTGAGACCGTCGGCT...GATGAACGGACTTTGGAGAGCCTGCCTGAGCCTCAGTCCCTTCCGTGCCTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR CAA 90 bp | GCTACACGTCTTCTGGCCAGAGCAGGAGGGGCTGTACCTGTTGGTTaGTTCTGTACACAGATGGGGATTCCTCCTCTTTCGTGTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: ATRLLARAGGAVPVG*FCTQMGIPPLSCLL Trigger: GAGGAGACACGAAAGAGGAGGAATCCCCATCTGTGTACAGAACAAACCAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACGTGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR CAA 90 bp | GGACAGCTACACGTCTTCTGGCCAGAGCAGGAGGGGCTGTACCTGTaGGTTTGTTCTGTACACAGATGGGGATTCCTCCTCTTTCGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GQLHVFWPEQEGLYL*VCSVHRWGFLLFRV Trigger: GACACGAAAGAGGAGGAATCCCCATCTGTGTACAGAACAAACCAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACGTGTAGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAGCAACAAGTGGGTCTTCTGGGATCTCATAATGTCCGAGGTCAACAATGGTAGGCACGGAAGGGACTaGGGCTCAGGCAGGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: FSNKWVFWDLIMSEVNNGRHGRD*GSGRLS Trigger: GGAGAGCCTGCCTGAGCCTCAGTCCCTTCCGTGCCT...ACCATTGTTGACCTCGGACATTATGAGATCCCAGAAGACCCACTTGTTGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGTCGTTTTCTGCGTGTCAGACAAGGCTTGCAGAGTCTGCAGGTGAAGCTTGCAGAGTCTGCAGGTaGAGCTTTTTCTGCACGGCA | + |
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Preference number: 2 (lower is better) Translates to: WESFSACQTRLAESAGEACRVCR*SFFCTA Trigger: TGCCGTGCAGAAAAAGCTTCACCTGCAGACTCTGCA...AGCTTCACCTGCAGACTCTGCAAGCCTTGTCTGACACGCAGAAAACGACTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTCCTGGGTGTACAGAGACCCTCCTCAGTGGGCAGGTACTGCAGTATGCCGGGATCTCAGGGCCTaGATCCTTTTGTCATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: STSWVYRDPPQWAGTAVCRDLRA*ILLSFS Trigger: AGAAAATGACAAAAGGATGCAGGCCCTGAGATCCCG...GCATACTGCAGTACCTGCCCACTGAGGAGGGTCTCTGTACACCCAGGAAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAATACATCATTGGAGATGAACAGGCCATTGTCCAGGCTGGTGTCCAAGCTGCCCTGGAGCTCACACTaGTCAGGCACTGGGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: KNTSLEMNRPLSRLVSKLPWSSH*SGTGLA Trigger: GGCAAGCCCAGTGCCTGACCAGTGTGAGCTCCAGGG...CAGCTTGGACACCAGCCTGGACAATGGCCTGTTCATCTCCAATGATGTATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| 3UTR-3UTR GCA 90 bp | TGGGCTCAAGTTCATCGAGGTCCAGGCACGGAAGGGACTGAGGCTCAGGCAGGCACATCTCATATAAAATaGATGCCAGTGACCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: WAQVHRGPGTEGTEAQAGTSHIK*MPVTRC Trigger: ACATCTGGTCACTGGCATGCATTTTATATGAGATGT...GCCTGCCTGAGCCTCAGTCCCTTCCGTGCCTGGACCTCGATGAACTTGAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR-3UTR CCA 90 bp | CACCCAACCAGCGCGGCAGTATCACTGTCCTGTTGGTTTGTTCTGTACACAGATGCCACATCCGTTCTCTaGGAGTCGTTTTCTGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: HPTSAAVSLSCWFVLYTDATSVL*ESFSAC Trigger: ACACGCAGAAAACGACTCCCAGAGAACGGATGTGGC...ATCTGTGTACAGAACAAACCAACAGGACAGTGATACTGCCGCGCTGGTTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR CAA 90 bp | CCACATCCGTTCTCTGGGAGTCGTTTTCTGCGTGTCAGACAAGGCTaGCAGAGTCTGCAGGTGAAGCTTTTTCTGCACGGCATTAATCGT | + |
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Preference number: 2 (lower is better) Translates to: PHPFSGSRFLRVRQG*QSLQVKLFLHGINR Trigger: ACGATTAATGCCGTGCAGAAAAAGCTTCACCTGCAGACTCTGCAAGCCTTGTCTGACACGCAGAAAACGACTCCCAGAGAACGGATGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR CAA 90 bp | GACATGTTCCAAACACCCAACCAGCGCGGCAGTATCACTGTCCTGTaGGTTTGTTCTGTACACAGATGGGGATTCCTCCTCTTTCGTGTC | + |
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Preference number: 2 (lower is better) Translates to: DMFQTPNQRGSITVL*VCSVHRWGFLLFRV Trigger: GACACGAAAGAGGAGGAATCCCCATCTGTGTACAGAACAAACCAACAGGACAGTGATACTGCCGCGCTGGTTGGGTGTTTGGAACATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTTCCAGTGTCATCTCTGGGTATTTACACATCAGGAGCTGAAGCTGCTCTTCAGTTCATGGAGCACATaGGCATGCACGGACCCCACA | + |
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Preference number: 2 (lower is better) Translates to: VFQCHLWVFTHQELKLLFSSWST*ACTDPT Trigger: TGTGGGGTCCGTGCATGCCCATGTGCTCCATGAACT...GAAGAGCAGCTTCAGCTCCTGATGTGTAAATACCCAGAGATGACACTGGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR-3UTR CCA 90 bp | CACCCAACCAGCGCGGCAGTATCACTGTCCTGTTGGTTTGTTCTGTACACAGATCGTTCATCTAGTTCATaGAGCACATGGGCATGCACG | + |
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Preference number: 2 (lower is better) Translates to: HPTSAAVSLSCWFVLYTDRSSSS*STWACT Trigger: CGTGCATGCCCATGTGCTCCATGAACTAGATGAACG...ATCTGTGTACAGAACAAACCAACAGGACAGTGATACTGCCGCGCTGGTTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR CAA 90 bp | GCTGATTCCTTCATGCGCTTCATCTTGGTCCGAGCCACTGCACTGTaGAAAACCATTGGTCCAGGAGACATGTCTGTCACTGCATTGGTA | + |
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Preference number: 2 (lower is better) Translates to: ADSFMRFILVRATAL*KTIGPGDMSVTALV Trigger: TACCAATGCAGTGACAGACATGTCTCCTGGACCAATGGTTTTCAACAGTGCAGTGGCTCGGACCAAGATGAAGCGCATGAAGGAATCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR CAA 90 bp | TCCATTCCTAGCTTCTGTACAGCTGATTCCTTCATGCGCTTCATCTaGGTCCGAGCCACTGCACTGTTGAAAACCATTGGTCCAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SIPSFCTADSFMRFI*VRATALLKTIGPGD Trigger: GTCTCCTGGACCAATGGTTTTCAACAGTGCAGTGGCTCGGACCAAGATGAAGCGCATGAAGGAATCAGCTGTACAGAAGCTAGGAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGTTCTCTGGGAGTCGTTTTCTGCGTGTCAGACAAGGCTTGCAGAGTCTGCAATATCTGTCCGGGAGTaGAGGTGTTTTACCTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: SVLWESFSACQTRLAESAISVRE*RCFTFN Trigger: GTTGAAGGTAAAACACCTTCACTCCCGGACAGATAT...TGCAGACTCTGCAAGCCTTGTCTGACACGCAGAAAACGACTCCCAGAGAACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| 3UTR-3UTR GCA 90 bp | AACCAGCGCGGCAGTATCACTGTCCTGTTGGTTTGTTCTGTACACAGATGGGGAACTGGAGCCAGCAAATaGATGATCCAGGCAACACAT | + |
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Preference number: 2 (lower is better) Translates to: NQRGSITVLLVCSVHRWGTGASK*MIQATH Trigger: ATGTGTTGCCTGGATCATGCATTTGCTGGCTCCAGT...TCCCCATCTGTGTACAGAACAAACCAACAGGACAGTGATACTGCCGCGCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| 3UTR-3UTR GCA 90 bp | ATATGCAGGATATCCAATAGGCAGCCCCAAAGGGGTCATGACCCACAGGTTGAGGGAAAGCTTTCAGGATaGCAGACTTCATCTATGACC | + |
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Preference number: 2 (lower is better) Translates to: ICRISNRQPQRGHDPQVEGKLSG*QTSSMT Trigger: GGTCATAGATGAAGTCTGGCATCCTGAAAGCTTTCC...CTCAACCTGTGGGTCATGACCCCTTTGGGGCTGCCTATTGGATATCCTGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| 3UTR-3UTR GCA 90 bp | TCGTATGAGCAGCCTCCTTCTGACAAACTGAGTTCTTGTCTTCCAGTGTCATCTCTGGGAGTCGTTTTCTaGGTGTCAGACAAGGCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SYEQPPSDKLSSCLPVSSLGVVF*VSDKAC Trigger: GCAAGCCTTGTCTGACACGCAGAAAACGACTCCCAG...AGATGACACTGGAAGACAAGAACTCAGTTTGTCAGAAGGAGGCTGCTCATACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCGTTCTCTGGGAGTCGTTTTCTGCGTGTCAGACAAGGCTTGCAGAGTCTGCATTCCAGTGTCATCTCTaGGTATTTACACATCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SVLWESFSACQTRLAESAFQCHL*VFTHQE Trigger: CTCCTGATGTGTAAATACCCAGAGATGACACTGGAA...TGCAGACTCTGCAAGCCTTGTCTGACACGCAGAAAACGACTCCCAGAGAACGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGTATGAGCAGCCTCCTTCTGACAAACTGAGTTCTTGTCTTCCAGTGTCATCTTCTTTTTCAGCCTCCTaGCTCTCTCATCGGCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SYEQPPSDKLSSCLPVSSSFSAS*LSHRLP Trigger: AGGCAGCCGATGAGAGAGCCAGGAGGCTGAAAAAGA...AGATGACACTGGAAGACAAGAACTCAGTTTGTCAGAAGGAGGCTGCTCATACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCCTGAGCAACCTGACACCAACTCCAGTTTCAAGACTTCTACTCTTAGCCTGAACAAGTGGGTCTTCTaGGATCTCATAATGTCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: GPEQPDTNSSFKTSTLSLNKWVF*DLIMSE Trigger: CTCGGACATTATGAGATCCCAGAAGACCCACTTGTT...CAGGCTAAGAGTAGAAGTCTTGAAACTGGAGTTGGTGTCAGGTTGCTCAGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGACCCTAGTGGTCCTGAGCAACCTGACACCAACTCCAGTTTCAAGACTTTTCCAGTGTCATCTCTaGGTATTTACACATCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RKTLVVLSNLTPTPVSRLFQCHL*VFTHQE Trigger: CTCCTGATGTGTAAATACCCAGAGATGACACTGGAA...AAGTCTTGAAACTGGAGTTGGTGTCAGGTTGCTCAGGACCACTAGGGTCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCAGAACAGGAATCAAAGACATCGGAATAATATTGTTCAGCAACAAGTGGGTAGTTCATGGAGCACATaGGCATGCACGGACCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: LQNRNQRHRNNIVQQQVGSSWST*ACTDPT Trigger: TGTGGGGTCCGTGCATGCCCATGTGCTCCATGAACT...ACCCACTTGTTGCTGAACAATATTATTCCGATGTCTTTGATTCCTGTTCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAAACTGGAGCCAGCAAATGCATGATCCAGGCAACACATCTCATATAAAATGCAGCCGACGGTCTCAATaGAGGACTCTTGTTCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: RNWSQQMHDPGNTSHIKCSRRSQ*RTLVQH Trigger: ATGTTGAACAAGAGTCCTTCATTGAGACCGTCGGCT...GCATTTTATATGAGATGTGTTGCCTGGATCATGCATTTGCTGGCTCCAGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
||
| 3UTR-3UTR CCA 90 bp | AATCAAAGACATCGGAATAATATTGTTCAGCAACAAGTGGGTCTTCTGGGATCTGCCACATCCGTTCTCTaGGAGTCGTTTTCTGCGTGT | + |
|
Preference number: 2 (lower is better) Translates to: NQRHRNNIVQQQVGLLGSATSVL*ESFSAC Trigger: ACACGCAGAAAACGACTCCCAGAGAACGGATGTGGC...AGATCCCAGAAGACCCACTTGTTGCTGAACAATATTATTCCGATGTCTTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCAGAACAGGAATCAAAGACATCGGAATAATATTGTTCAGCAACAAGTGGGTGAGCCAGCAAATGCATaGTCCAGGCAACACATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LQNRNQRHRNNIVQQQVGEPANA*SRQHIS Trigger: TGAGATGTGTTGCCTGGATCATGCATTTGCTGGCTC...ACCCACTTGTTGCTGAACAATATTATTCCGATGTCTTTGATTCCTGTTCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
||
| 3UTR CCA 72 bp | CACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTaGTCAGGCACTGGGCTTGCCCTGGATGGACGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HKPASHSPWSSH*SGTGLALDGRS Trigger: ACTGCGTCCATCCAGGGCAAGCCCAGTGCCTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR CCA 72 bp | TGCAGCACTTCCTGGGTGTACAGAGACCCTCCTCAGTaGGCAGGTACTGCAGTATGCAGGACAGCCTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CSTSWVYRDPPQ*AGTAVCRTACP Trigger: AGGGCAGGCTGTCCTGCATACTGCAGTACCTGCCCACTGAGGAGGGTCTCTGTACACCCAGGAAGTGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAGTTCATCGAGGTCCAGGCACGGAAGGGACTGAGGCTCAGGCAGGCTCTCCGTGTCAGACAAGGCTaGCAGAGTCTGCAGGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKFIEVQARKGLRLRQALRVRQG*QSLQVK Trigger: CTTCACCTGCAGACTCTGCAAGCCTTGTCTGACACG...GAGAGCCTGCCTGAGCCTCAGTCCCTTCCGTGCCTGGACCTCGATGAACTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR TCA 72 bp | GGCTCAAGTTCATCGAGGTCCAGGCACGGAAGGGACTaGGGCTCAGGCAGGCTCTCCAAAGTCCGTTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: GSSSSRSRHGRD*GSGRLSKVRSS Trigger: AGATGAACGGACTTTGGAGAGCCTGCCTGAGCCTCAGTCCCTTCCGTGCCTGGACCTCGATGAACTTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR GCA 72 bp | GGCACTGGGCTTGCCCTGGATGGACGCAGTACTGAGTaGCTGTGTCTTCAGAGTGCTCCCAGCATACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GTGLALDGRSTE*LCLQSAPSILE Trigger: TTCCAGTATGCTGGGAGCACTCTGAAGACACAGGCACTCAGTACTGCGTCCATCCAGGGCAAGCCCAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR GCA 72 bp | TACAGAGACCCTCCTCAGTGGGCAGGTACTGCAGTATaGAGGACAGCCTGCCCTCCTGCACTGACTAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: YRDPPQWAGTAV*RTACPPALTSL Trigger: TAGGCTAGTCAGTGCAGGAGGGCAGGCTGTCCTGCATACTGCAGTACCTGCCCACTGAGGAGGGTCTCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR CCA 72 bp | CGGCTGCCTGCAGCTTCCTCAGCCACATCCGTTCTCTaGGAGTCGTTTTCTGCGTGTCAGACAAGGCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLPAASSATSVL*ESFSACQTRLA Trigger: TGCAAGCCTTGTCTGACACGCAGAAAACGACTCCCAGAGAACGGATGTGGCTGAGGAAGCTGCAGGCAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR CCA 72 bp | TCAGGCAGGCTCTCCAAAGTCCGTTCATCTAGTTCATaGAGCACATGGGCATGCACGGACCCCACATTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: SGRLSKVRSSSS*STWACTDPTFR Trigger: CCGGAATGTGGGGTCCGTGCATGCCCATGTGCTCCATGAACTAGATGAACGGACTTTGGAGAGCCTGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCATTGTCCAGGCTGGTGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCACTTCATCTATGACCTaGACCTGTGACTCCATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GHCPGWCPSCHKPASHSPTSSMT*TCDSMP Trigger: GGGCATGGAGTCACAGGTCAAGGTCATAGATGAAGT...GGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACACCAGCCTGGACAATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR CCA 72 bp | GAGTCTATTCAGCACCGTGGACAGCTACACGTCTTCTaGCCAGAGCAGGAGGGGCTGTACCTGTTGGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ESIQHRGQLHVF*PEQEGLYLLVC Trigger: ACAAACCAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACGTGTAGCTGTCCACGGTGCTGAATAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCGTGGACAGCTACACGTCTTCTGGCCAGAGCAGGAGGGGCTGTACCTGTTGCTCAATGAAGGACTCTaGTTCAACATGCGTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: HRGQLHVFWPEQEGLYLLLNEGL*FNMRSM Trigger: CATGGAACGCATGTTGAACAAGAGTCCTTCATTGAG...CAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACGTGTAGCTGTCCACGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR GCA 72 bp | CCCGAGGGCTGTACGTCTGAGGGAAAGCTTTCAGGATaGCAGACTTCATCTATGACCTTGACCTGTGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: PEGCTSEGKLSG*QTSSMTLTCDS Trigger: GGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCCTGAAAGCTTTCCCTCAGACGTACAGCCCTCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR CCA 72 bp | CATAATGTCCGAGGTCAACAATGGTGTCCTCTAAACTaGGCTCAAGTTCATCGAGGTCCAGGCACGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HNVRGQQWCPLN*AQVHRGPGTEG Trigger: CCCTTCCGTGCCTGGACCTCGATGAACTTGAGCCCAGTTTAGAGGACACCATTGTTGACCTCGGACATTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCATTCCTAGCTTCTGTACAGCTGATTCCTTCATGCGCTTCATCTTGGTCCTTGGCATCATAGCCTaGGTGCTTCAGGGCCTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSIPSFCTADSFMRFILVLGIIA*VLQGLG Trigger: CCCGAGGCCCTGAAGCACCAAGGCTATGATGCCAAG...GACCAAGATGAAGCGCATGAAGGAATCAGCTGTACAGAAGCTAGGAATGGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
||
| 3UTR GCA 72 bp | CAGAGTCTGATAAGTCTATGGGGGCCTGTCTGCCTCTaGCTCTCAAAAGCAAAGACTCTTGTACATGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QSLISLWGPVCL*LSKAKTLVHGA Trigger: GGCTCCATGTACAAGAGTCTTTGCTTTTGAGAGGCAGAGGCAGACAGGCCCCCATAGACTTATCAGACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR TCA 72 bp | GCTGAGTGCTTTCCTTTCCATAGACATCCTTACATCTaGCCAGGAGCCAAAGGGAACGGTAGTGGTTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: AECFPFHRHPYI*PGAKGNGSGSS Trigger: ACTGGAACCACTACCGTTCCCTTTGGCTCCTGGTCAGATGTAAGGATGTCTATGGAAAGGAAAGCACTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR TCA 72 bp | TCTCTGCTTCTCTGGCATTCTGGTGCCTTGCTCTCTTaGGGTAATCGTAGACCTCCTCAAACGTTTCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: SLLLWHSGALLS*GNRRPPQTFPF Trigger: GAATGGAAACGTTTGAGGAGGTCTACGATTACCTCAAGAGAGCAAGGCACCAGAATGCCAGAGAAGCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
||
| 3UTR GCA 72 bp | CCTGATCAGAGTCTGATAAGTCTATGGGGGCCTGTCTaGCTCTGCCTCTCAAAAGCAAAGACTCTTGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: PDQSLISLWGPV*LCLSKAKTLVH Trigger: ATGTACAAGAGTCTTTGCTTTTGAGAGGCAGAGGCAGACAGGCCCCCATAGACTTATCAGACTCTGATCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR CCA 72 bp | CATCTTGGTCCGAGCCACTGCACTGTTGAAAACCATTaGTCCAGGAGACATGTCTGTCACTGCATTGGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: HLGPSHCTVENH*SRRHVCHCIGN Trigger: ATTACCAATGCAGTGACAGACATGTCTCCTGGACCAATGGTTTTCAACAGTGCAGTGGCTCGGACCAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
||
| 3UTR TCA 72 bp | ACACCAACTCCAGTTTCAAGACTTCTACTCTTAGCCTaGGTTCAGAGTCTATTCAGCACCGTGGACAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TPTPVSRLLLLA*VQSLFSTVDSY Trigger: GTAGCTGTCCACGGTGCTGAATAGACTCTGAACTCAGGCTAAGAGTAGAAGTCTTGAAACTGGAGTTGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATGCAGGATATCCAATAGGCAGCCCCAAAGGGGTCATGACCCACAGGTTGAGATCAAAAATACATCATaGGAGATGAACAGGCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: ICRISNRQPQRGHDPQVEIKNTS*EMNRPL Trigger: CAATGGCCTGTTCATCTCCAATGATGTATTTTTGAT...CTCAACCTGTGGGTCATGACCCCTTTGGGGCTGCCTATTGGATATCCTGCATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR-3UTR CAA 90 bp | TCGTATGAGCAGCCTCCTTCTGACAAACTGAGTTCTTGTCTTCCAGTGTCATCTCTCAATGAAGGACTCTaGTTCAACATGCGTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SYEQPPSDKLSSCLPVSSLNEGL*FNMRSM Trigger: CATGGAACGCATGTTGAACAAGAGTCCTTCATTGAG...AGATGACACTGGAAGACAAGAACTCAGTTTGTCAGAAGGAGGCTGCTCATACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR TCA 72 bp | GTCTCAATGAAGGACTCTTGTTCAACATGCGTTCCATaGTGGTGTTTAGTTCTCGTGGATATCTGTCCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VSMKDSCSTCVP*WCLVLVDICPG Trigger: TCCCGGACAGATATCCACGAGAACTAAACACCATCATGGAACGCATGTTGAACAAGAGTCCTTCATTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR GCA 72 bp | TCTCCTCCTGCTTCTGAGAATATCATTTCTTCCTCCTaGTCCTCGCTGTCTTCAGAACAGGAATCAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SPPASENIISSS*SSLSSEQESKT Trigger: TGTCTTTGATTCCTGTTCTGAAGACAGCGAGGAGCAGGAGGAAGAAATGATATTCTCAGAAGCAGGAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGAACAGGAATCAAAGACATCGGAATAATATTGTTCAGCAACAAGTGGGTGCTGTACCTGTTGGTTaGTTCTGTACACAGATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQNRNQRHRNNIVQQQVGAVPVG*FCTQMG Trigger: CCCCATCTGTGTACAGAACAAACCAACAGGTACAGC...ACCCACTTGTTGCTGAACAATATTATTCCGATGTCTTTGATTCCTGTTCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR TCA 72 bp | GATTATATAACAGTGACTCTCAACCTTCCTATGCTGTaGCCCTTTAACACAGTTCCTCATGTTGTGGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: DYITVTLNLPML*PFNTVPHVVVT Trigger: GGTCACCACAACATGAGGAACTGTGTTAAAGGGTCACAGCATAGGAAGGTTGAGAGTCACTGTTATATAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR TCA 72 bp | AAAACCACAGACAAGAAACTGGAGCCAGCAAATGCATaGTCCAGGCAACACATCTCATATAAAATGCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: KTTDKKLEPANA*SRQHISYKMHA Trigger: GGCATGCATTTTATATGAGATGTGTTGCCTGGATCATGCATTTGCTGGCTCCAGTTTCTTGTCTGTGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
||
| 3UTR GCA 72 bp | CAAATGCATGATCCAGGCAACACATCTCATATAAAATaGATGCCAGTGACCAGATGTCAGACTTGGCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: QMHDPGNTSHIK*MPVTRCQTWHH Trigger: ATGATGCCAAGTCTGACATCTGGTCACTGGCATGCATTTTATATGAGATGTGTTGCCTGGATCATGCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
||
| 3UTR CCA 72 bp | ATCGGAATAATATTGTTCAGCAACAAGTGGGTCTTCTaGGATCTCATAATGTCCGAGGTCAACAATGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: IGIILFSNKWVF*DLIMSEVNNGV Trigger: GACACCATTGTTGACCTCGGACATTATGAGATCCCAGAAGACCCACTTGTTGCTGAACAATATTATTCCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| 3UTR TCA 72 bp | TGCTGTGACCCTTTAACACAGTTCCTCATGTTGTGGTaGCCTTTAACCATAAAGTCATTTTACTTCTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: CCDPLTQFLMLW*PLTIKSFYFYL Trigger: GAGGTAGAAGTAAAATGACTTTATGGTTAAAGGTCACCACAACATGAGGAACTGTGTTAAAGGGTCACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR TCA 72 bp | AATTTTGCTACTGTTATGAACTGTAATGTAAATATCTaGTATGCAGGATATCCAATAGGCAGCCCCAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: NFATVMNCNVNI*YAGYPIGSPKG Trigger: CCCTTTGGGGCTGCCTATTGGATATCCTGCATATCAGATATTTACATTACAGTTCATAACAGTAGCAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | GCCTGTGTCTTCAGAGTGCTCCCAGCATACTGGAAACCCCGAGGGCTGTACGTCAGGCACGGAAGGGACTaGGGCTCAGGCAGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACVFRVLPAYWKPRGLYVRHGRD*GSGRLS Trigger: GGAGAGCCTGCCTGAGCCTCAGTCCCTTCCGTGCCT...GACGTACAGCCCTCGGGGTTTCCAGTATGCTGGGAGCACTCTGAAGACACAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | GTCTATTCAGCACCGTGGACAGCTACACGTCTTCTGGCCAGAGCAGGAGGGGCTAGCCTGGAGAGGAGCTaGGCTTCCACATTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYSAPWTATRLLARAGGASLERS*ASTLAC Trigger: GCAGGCCAATGTGGAAGCTCAGCTCCTCTCCAGGCT...AGCCCCTCCTGCTCTGGCCAGAAGACGTGTAGCTGTCCACGGTGCTGAATAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| 3UTR CAA 72 bp | ATAGTCCCTGGAGCTCACACTGGTCAGGCACTGGGCTaGCCCTGGATGGACGCAGTACTGAGTGCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVPGAHTGQALG*PWMDAVLSACV Trigger: GACACAGGCACTCAGTACTGCGTCCATCCAGGGCAAGCCCAGTGCCTGACCAGTGTGAGCTCCAGGGACTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | TCAGGCACTGGGCTTGCCCTGGATGGACGCAGTACTGAGTGCCTGTGTCTTCAGCTCTCATCGGCTGCCTaGAGCTTCCTCAGCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: SGTGLALDGRSTECLCLQLSSAA*SFLSHI Trigger: GATGTGGCTGAGGAAGCTGCAGGCAGCCGATGAGAG...CTGAAGACACAGGCACTCAGTACTGCGTCCATCCAGGGCAAGCCCAGTGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCATTGTCCAGGCTGGTGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTAGCCTGGAGAGGAGCTaGGCTTCCACATTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGHCPGWCPSCHKPASHSSLERS*ASTLAC Trigger: GCAGGCCAATGTGGAAGCTCAGCTCCTCTCCAGGCT...ACTATGGCTAGCTGGCTTGTGACAGCTTGGACACCAGCCTGGACAATGGCCTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | AGCACTTCCTGGGTGTACAGAGACCCTCCTCAGTGGGCAGGTACTGCAGTATGCCTGACAATGGCAGGATaGTGGAGCCTGGAGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STSWVYRDPPQWAGTAVCLTMAG*WSLERS Trigger: GCTCCTCTCCAGGCTCCATCATCCTGCCATTGTCAG...GCATACTGCAGTACCTGCCCACTGAGGAGGGTCTCTGTACACCCAGGAAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR CCA 90 bp | TGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGGCACTGGGCAGGATGATGGAGCCTaGAGAGGAGCTGAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CHKPASHSPWSSHWSGTGQDDGA*RGAELP Trigger: TGGAAGCTCAGCTCCTCTCCAGGCTCCATCATCCTG...CCCAGTGCCTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR CCA 90 bp | GGATGCCAGACTTCATCTATGACCTTGACCTGTGACTCCATGCCCCGGCAGGCAAGTTCATGGAGCACATaGGCATGCACGGACCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GCQTSSMTLTCDSMPRQASSWST*ACTDPT Trigger: TGTGGGGTCCGTGCATGCCCATGTGCTCCATGAACT...TGCCTGCCGGGGCATGGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | CCTGTGTCTTCAGAGTGCTCCCAGCATACTGGAAACCCCGAGGGCTGTACGTCTTGCAGAGTCTGCAGGTaGAGCTTTTTCTGCACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSSECSQHTGNPEGCTSCRVCR*SFFCTA Trigger: TGCCGTGCAGAAAAAGCTTCACCTGCAGACTCTGCA...AGACGTACAGCCCTCGGGGTTTCCAGTATGCTGGGAGCACTCTGAAGACACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | GGATGCCAGACTTCATCTATGACCTTGACCTGTGACTCCATGCCCCGGCAGGCAGGTGCCTTGCTCTCTTaGGGTAATCGTAGACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCQTSSMTLTCDSMPRQAGALLS*GNRRPP Trigger: AGGAGGTCTACGATTACCTCAAGAGAGCAAGGCACC...TGCCTGCCGGGGCATGGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR CCA 90 bp | CCTGTGTCTTCAGAGTGCTCCCAGCATACTGGAAACCCCGAGGGCTGTACGTCTGCCACATCCGTTCTCTaGGAGTCGTTTTCTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSSECSQHTGNPEGCTSATSVL*ESFSAC Trigger: ACACGCAGAAAACGACTCCCAGAGAACGGATGTGGC...AGACGTACAGCCCTCGGGGTTTCCAGTATGCTGGGAGCACTCTGAAGACACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR CAA 72 bp | CACGTCTTCTGGCCAGAGCAGGAGGGGCTGTACCTGTaGGTTTGTTCTGTACACAGATGGGGATTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVFWPEQEGLYL*VCSVHRWGFLL Trigger: GAGGAGGAATCCCCATCTGTGTACAGAACAAACCAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGCAGCTTCCTCAGCCACATCCGTTCTCTGGGAGTCGTTTTCTGCGTGTGAGCCAGCAAATGCATaGTCCAGGCAACACATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPAASSATSVLWESFSACEPANA*SRQHIS Trigger: TGAGATGTGTTGCCTGGATCATGCATTTGCTGGCTC...ACACGCAGAAAACGACTCCCAGAGAACGGATGTGGCTGAGGAAGCTGCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR GCA 90 bp | GTCTATTCAGCACCGTGGACAGCTACACGTCTTCTGGCCAGAGCAGGAGGGGCTCTGCTCCATGAAGCTTaGATGGAATCTGACAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VYSAPWTATRLLARAGGALLHEA*MESDNG Trigger: GCCATTGTCAGATTCCATGCAAGCTTCATGGAGCAG...AGCCCCTCCTGCTCTGGCCAGAAGACGTGTAGCTGTCCACGGTGCTGAATAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCACTGGGAGTCGTTTTCTaGGTGTCAGACAAGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPSCHKPASHSPWSSHWSLGVVF*VSDKAC Trigger: GCAAGCCTTGTCTGACACGCAGAAAACGACTCCCAG...TGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR CCA 90 bp | GACTCCATGCCCCGGCAGGCAGCTGAGTGCTTTCCTTTCCATAGACATCCTTACTCTTTTTCAGCCTCCTaGCTCTCTCATCGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSMPRQAAECFPFHRHPYSFSAS*LSHRLP Trigger: AGGCAGCCGATGAGAGAGCCAGGAGGCTGAAAAAGA...GTAAGGATGTCTATGGAAAGGAAAGCACTCAGCTGCCTGCCGGGGCATGGAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCATTGTCCAGGCTGGTGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTGCTTCTCTGGCATTCTaGTGCCTTGCTCTCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGHCPGWCPSCHKPASHSASLAF*CLALLR Trigger: CCTCAAGAGAGCAAGGCACCAGAATGCCAGAGAAGC...ACTATGGCTAGCTGGCTTGTGACAGCTTGGACACCAGCCTGGACAATGGCCTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCATCACAGGGCAGGTTCTaGAGAGAGGGCTCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPSCHKPASHSPWSSHWSSQGRF*REGSFP Trigger: AGGAAAAGAGCCCTCTCTCCAGAACCTGCCCTGTGA...TGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCATTGTCCAGGCTGGTGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTGAGCCAGCAAATGCATaGTCCAGGCAACACATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGHCPGWCPSCHKPASHSEPANA*SRQHIS Trigger: TGAGATGTGTTGCCTGGATCATGCATTTGCTGGCTC...ACTATGGCTAGCTGGCTTGTGACAGCTTGGACACCAGCCTGGACAATGGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | TGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGGCACTGGGATATCTGTCCGGGAGTaGAGGTGTTTTACCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CHKPASHSPWSSHWSGTGISVRE*RCFTFN Trigger: GTTGAAGGTAAAACACCTTCACTCCCGGACAGATAT...CCCAGTGCCTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | GCCATTGTCCAGGCTGGTGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTAGCCGACGGTCTCAATaGAGGACTCTTGTTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: AIVQAGVQAVTSQLAIVPSRRSQ*RTLVQH Trigger: ATGTTGAACAAGAGTCCTTCATTGAGACCGTCGGCT...AGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACACCAGCCTGGACAATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | GGCCATTGTCCAGGCTGGTGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCATGCAAAAAGTCTCCTaGTCCATGAAGCTTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GHCPGWCPSCHKPASHSPMQKVS*SMKLAW Trigger: CCATGCAAGCTTCATGGAGCAGGAGACTTTTTGCAT...GGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACACCAGCCTGGACAATGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCACGTTCATCTAGTTCATaGAGCACATGGGCATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CPSCHKPASHSPWSSHWSRSSSS*STWACT Trigger: CGTGCATGCCCATGTGCTCCATGAACTAGATGAACG...TGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR CAA 72 bp | TTCTCTGGGAGTCGTTTTCTGCGTGTCAGACAAGGCTaGCAGAGTCTGCAGGTGAAGCTTTTTCTGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSGSRFLRVRQG*QSLQVKLFLHG Trigger: GCCGTGCAGAAAAAGCTTCACCTGCAGACTCTGCAAGCCTTGTCTGACACGCAGAAAACGACTCCCAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGCAGCTTCCTCAGCCACATCCGTTCTCTGGGAGTCGTTTTCTGCGTGTTTTGGCTTTCTTGTCTaGCACCAGATAGACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPAASSATSVLWESFSACFGFLV*HQIDSS Trigger: GGAACTGTCTATCTGGTGTCAGACAAGAAAGCCAAA...ACACGCAGAAAACGACTCCCAGAGAACGGATGTGGCTGAGGAAGCTGCAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGGTCTCCTCCTGCTTCTaGGAATATCATTTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTSQLAIVPGAHTGQVSSCF*EYHFFL Trigger: GAGGAAGAAATGATATTCTCAGAAGCAGGAGGAGAC...CTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | ATATGCAGGATATCCAATAGGCAGCCCCAAAGGGGTCATGACCCACAGGTTGAGACCACCGTCTCCAGATaGTCCCAGATCTCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ICRISNRQPQRGHDPQVETTVSR*SQISAS Trigger: AGAAGCAGAGATCTGGGAGCATCTGGAGACGGTGGT...CTCAACCTGTGGGTCATGACCCCTTTGGGGCTGCCTATTGGATATCCTGCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR CCA 90 bp | TCAGGCACTGGGCTTGCCCTGGATGGACGCAGTACTGAGTGCCTGTGTCTTCAGACTGTTGAAAACCATTaGTCCAGGAGACATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGTGLALDGRSTECLCLQTVENH*SRRHVC Trigger: ACAGACATGTCTCCTGGACCAATGGTTTTCAACAGT...CTGAAGACACAGGCACTCAGTACTGCGTCCATCCAGGGCAAGCCCAGTGCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGCTCTTTTCCTTCCATaGTCAGCAGCAACTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CPSCHKPASHSPWSSHWSALFLP*SAATPQ Trigger: TTGAGGAGTTGCTGCTGACCATGGAAGGAAAAGAGC...TGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | CACCGTGGACAGCTACACGTCTTCTGGCCAGAGCAGGAGGGGCTGTACCTGTTGAACCATTCTACTATCTaGTTTTCAGCGAAGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRGQLHVFWPEQEGLYLLNHSTI*FSAKTF Trigger: GAAAGTCTTCGCTGAAAATCAGATAGTAGAATGGTT...CAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACGTGTAGCTGTCCACGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGCCAGAGCAGGAGGGGCTGTACCTGTTGGTTTGTTCTGTACACAGATGGCTTCCACATTGGCCTaGACGGTCTCATTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLARAGGAVPVGLFCTQMASTLA*TVSFGF Trigger: AAATCCAAATGAGACCGTGCAGGCCAATGTGGAAGC...CATCTGTGTACAGAACAAACCAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR GCA 90 bp | TCCGTTCTCTGGGAGTCGTTTTCTGCGTGTCAGACAAGGCTTGCAGAGTCTGCAACTGGAGCCAGCAAATaGATGATCCAGGCAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLWESFSACQTRLAESATGASK*MIQATH Trigger: ATGTGTTGCCTGGATCATGCATTTGCTGGCTCCAGT...TGCAGACTCTGCAAGCCTTGTCTGACACGCAGAAAACGACTCCCAGAGAACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| CDS-3UTR CCA 90 bp | TGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAAACAAGTGGGTCTTCTaGGATCTCATAATGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPSCHKPASHSPWSSHWSNKWVF*DLIMSE Trigger: CTCGGACATTATGAGATCCCAGAAGACCCACTTGTT...TGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | TGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGGCACTGGGAACCATTCTACTATCTaGTTTTCAGCGAAGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHKPASHSPWSSHWSGTGNHSTI*FSAKTF Trigger: GAAAGTCTTCGCTGAAAATCAGATAGTAGAATGGTT...CCCAGTGCCTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | TGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGGCACTGGGAGACATGTCTGTCACTaGATTGGTAATAGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CHKPASHSPWSSHWSGTGRHVCH*IGNSLC Trigger: ACAAAGACTATTACCAATGCAGTGACAGACATGTCT...CCCAGTGCCTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR CAA 72 bp | TTCATGCGCTTCATCTTGGTCCGAGCCACTGCACTGTaGAAAACCATTGGTCCAGGAGACATGTCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FMRFILVRATAL*KTIGPGDMSVT Trigger: AGTGACAGACATGTCTCCTGGACCAATGGTTTTCAACAGTGCAGTGGCTCGGACCAAGATGAAGCGCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAAAGAACATATCTTCTTaGAATCAAAGCGGTCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CPSCHKPASHSPWSSHWSKNISS*NQSGRV Trigger: TACCCGACCGCTTTGATTGCAAGAAGATATGTTCTT...TGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | GGATGCCAGACTTCATCTATGACCTTGACCTGTGACTCCATGCCCCGGCAGGCAACATCTCATATAAAATaGATGCCAGTGACCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GCQTSSMTLTCDSMPRQATSHIK*MPVTRC Trigger: ACATCTGGTCACTGGCATGCATTTTATATGAGATGT...TGCCTGCCGGGGCATGGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR GCA 90 bp | GAGGGAAAGCTTTCAGGATGCCAGACTTCATCTATGACCTTGACCTGTGACTCCACTGGAGCCAGCAAATaGATGATCCAGGCAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: EGKLSGCQTSSMTLTCDSTGASK*MIQATH Trigger: ATGTGTTGCCTGGATCATGCATTTGCTGGCTCCAGT...GGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCCTGAAAGCTTTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | GGATTTTCAATCCAGGCCCTTAGATTTATGTATTGCTTGTATGTGGTCACAGGAGGCTCTCTCATCGGCTaGCTGCAGCTTCCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFSIQALRFMYCLYVVTGGSLIG*LQLPQP Trigger: TGGCTGAGGAAGCTGCAGGCAGCCGATGAGAGAGCC...TCCTGTGACCACATACAAGCAATACATAAATCTAAGGGCCTGGATTGAAAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAAGCTTTCAGGATGCCAGACTTCATCTATGACCTTGACCTGTGACTCCCGGGATCTCAGGGCCTaGATCCTTTTGTCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGKLSGCQTSSMTLTCDSRDLRA*ILLSFS Trigger: AGAAAATGACAAAAGGATGCAGGCCCTGAGATCCCG...GGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCCTGAAAGCTTTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | GTCTATTCAGCACCGTGGACAGCTACACGTCTTCTGGCCAGAGCAGGAGGGGCTACATCTCATATAAAATaGATGCCAGTGACCGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VYSAPWTATRLLARAGGATSHIK*MPVTDF Trigger: AAAATCGGTCACTGGCATGCATTTTATATGAGATGT...AGCCCCTCCTGCTCTGGCCAGAAGACGTGTAGCTGTCCACGGTGCTGAATAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR CCA 90 bp | ATATGCAGGATATCCAATAGGCAGCCCCAAAGGGGTCATGACCCACAGGTTGAGCCACAGACAAGAAACTaGAGCCAGCAAATGCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: ICRISNRQPQRGHDPQVEPQTRN*SQQMHD Trigger: ATCATGCATTTGCTGGCTCCAGTTTCTTGTCTGTGG...CTCAACCTGTGGGTCATGACCCCTTTGGGGCTGCCTATTGGATATCCTGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR CAA 72 bp | AGCTTCTGTACAGCTGATTCCTTCATGCGCTTCATCTaGGTCCGAGCCACTGCACTGTTGAAAACCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFCTADSFMRFI*VRATALLKTIG Trigger: ACCAATGGTTTTCAACAGTGCAGTGGCTCGGACCAAGATGAAGCGCATGAAGGAATCAGCTGTACAGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTTCTGGCCAGAGCAGGAGGGGCTGTACCTGTTGGTTTGTTCTGTACACAGGCCAGTGACCGATTTTaGGTAGATTATTTTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLLARAGGAVPVGLFCTQASDRF*VDYFSE Trigger: TTCTGAAAAATAATCTACTCAAAATCGGTCACTGGC...CTGTGTACAGAACAAACCAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCCTCAGCCACATCCGTTCTCTGGGAGTCGTTTTCTGCGTGTCAGACAATTCCAAAACTTCCACTaGCAAGTTTCTGCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLPQPHPFSGSRFLRVRQFQNFH*QVSAEE Trigger: TTCTTCAGCAGAAACTTGGCAGTGGAAGTTTTGGAA...TTGTCTGACACGCAGAAAACGACTCCCAGAGAACGGATGTGGCTGAGGAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAAGCTTTCAGGATGCCAGACTTCATCTATGACCTTGACCTGTGACTCCATCATTTCTTCCTCCTaGTCCTCGCTGTCTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGKLSGCQTSSMTLTCDSIISSS*SSLSSE Trigger: TTCTGAAGACAGCGAGGAGCAGGAGGAAGAAATGAT...GGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCCTGAAAGCTTTCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | AAAAGTGTTGATCAAAAATACATCATTGGAGATGAACAGGCCATTGTCCAGGCTCTGACAATGGCAGGATaGTGGAGCCTGGAGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSVDQKYIIGDEQAIVQALTMAG*WSLERS Trigger: GCTCCTCTCCAGGCTCCATCATCCTGCCATTGTCAG...AGCCTGGACAATGGCCTGTTCATCTCCAATGATGTATTTTTGATCAACACTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| 3UTR CAA 72 bp | TTGATCAAAAATACATCATTGGAGATGAACAGGCCATaGTCCAGGCTGGTGTCCAAGCTGTCACAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKNTSLEMNRP*SRLVSKLSQAS Trigger: GCTGGCTTGTGACAGCTTGGACACCAGCCTGGACAATGGCCTGTTCATCTCCAATGATGTATTTTTGATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR TCA 90 bp | GGATTTTCAATCCAGGCCCTTAGATTTATGTATTGCTTGTATGTGGTCACAGGAGAGCCACTGCACTGTTaGAAACCATTGGTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFSIQALRFMYCLYVVTGEPLHC*KPLVQE Trigger: CTCCTGGACCAATGGTTTTCAACAGTGCAGTGGCTC...TCCTGTGACCACATACAAGCAATACATAAATCTAAGGGCCTGGATTGAAAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAAGCTTTCAGGATGCCAGACTTCATCTATGACCTTGACCTGTGACTCCTTCCAAAACTTCCACTaGCAAGTTTCTGCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGKLSGCQTSSMTLTCDSFQNFH*QVSAEE Trigger: TTCTTCAGCAGAAACTTGGCAGTGGAAGTTTTGGAA...GGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCCTGAAAGCTTTCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
||
| CDS-3UTR GCA 90 bp | TCGTATGAGCAGCCTCCTTCTGACAAACTGAGTTCTTGTCTTCCAGTGTCATCTATGCAAAAAGTCTCCTaGTCCATGAAGCTTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SYEQPPSDKLSSCLPVSSMQKVS*SMKLAW Trigger: CCATGCAAGCTTCATGGAGCAGGAGACTTTTTGCAT...AGATGACACTGGAAGACAAGAACTCAGTTTGTCAGAAGGAGGCTGCTCATACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR CCA 90 bp | AATCAAAGACATCGGAATAATATTGTTCAGCAACAAGTGGGTCTTCTGGGATCTCAGGATGATGGAGCCTaGAGAGGAGCTGAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQRHRNNIVQQQVGLLGSQDDGA*RGAELP Trigger: TGGAAGCTCAGCTCCTCTCCAGGCTCCATCATCCTG...AGATCCCAGAAGACCCACTTGTTGCTGAACAATATTATTCCGATGTCTTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGCAACAAGTGGGTCTTCTGGGATCTCATAATGTCCGAGGTCAACAATGGTTCCATGAAGCTTGCATaGAATCTGACAATGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSNKWVFWDLIMSEVNNGSMKLA*NLTMAG Trigger: TCCTGCCATTGTCAGATTCCATGCAAGCTTCATGGA...ACCATTGTTGACCTCGGACATTATGAGATCCCAGAAGACCCACTTGTTGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
||
| CDS-3UTR GCA 90 bp | AAAATGTCTGCAGCCGACGGTCTCAATGAAGGACTCTTGTTCAACATGCGTTCCAAGAACATATCTTCTTaGAATCAAAGCGGTCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KMSAADGLNEGLLFNMRSKNISS*NQSGRV Trigger: TACCCGACCGCTTTGATTGCAAGAAGATATGTTCTT...GGAACGCATGTTGAACAAGAGTCCTTCATTGAGACCGTCGGCTGCAGACATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| CDS-3UTR CCA 90 bp | GGACTCTTGTTCAACATGCGTTCCATGATGGTGTTTAGTTCTCGTGGATATCTGCCACAGACAAGAAACTaGAGCCAGCAAATGCATGAT | + |
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Preference number: 4 (lower is better) Translates to: GLLFNMRSMMVFSSRGYLPQTRN*SQQMHD Trigger: ATCATGCATTTGCTGGCTCCAGTTTCTTGTCTGTGG...CAGATATCCACGAGAACTAAACACCATCATGGAACGCATGTTGAACAAGAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| 3UTR CAA 72 bp | AAAATGTCTGCAGCCGACGGTCTCAATGAAGGACTCTaGTTCAACATGCGTTCCATGATGGTGTTTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: KMSAADGLNEGL*FNMRSMMVFSS Trigger: AGAACTAAACACCATCATGGAACGCATGTTGAACAAGAGTCCTTCATTGAGACCGTCGGCTGCAGACATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| CDS-3UTR GCA 90 bp | TCGTATGAGCAGCCTCCTTCTGACAAACTGAGTTCTTGTCTTCCAGTGTCATCTAAGAACATATCTTCTTaGAATCAAAGCGGTCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SYEQPPSDKLSSCLPVSSKNISS*NQSGRV Trigger: TACCCGACCGCTTTGATTGCAAGAAGATATGTTCTT...AGATGACACTGGAAGACAAGAACTCAGTTTGTCAGAAGGAGGCTGCTCATACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| CDS-3UTR GCA 90 bp | CTTTGGGGATTTTCAATCCAGGCCCTTAGATTTATGTATTGCTTGTATGTGGTCGCTTCCACATTGGCCTaGACGGTCTCATTTGGATTT | + |
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Preference number: 4 (lower is better) Translates to: LWGFSIQALRFMYCLYVVASTLA*TVSFGF Trigger: AAATCCAAATGAGACCGTGCAGGCCAATGTGGAAGC...GACCACATACAAGCAATACATAAATCTAAGGGCCTGGATTGAAAATCCCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR GCA 90 bp | CTTTGGGGATTTTCAATCCAGGCCCTTAGATTTATGTATTGCTTGTATGTGGTCCTGCTCCATGAAGCTTaGATGGAATCTGACAATGGC | + |
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Preference number: 4 (lower is better) Translates to: LWGFSIQALRFMYCLYVVLLHEA*MESDNG Trigger: GCCATTGTCAGATTCCATGCAAGCTTCATGGAGCAG...GACCACATACAAGCAATACATAAATCTAAGGGCCTGGATTGAAAATCCCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR GCA 90 bp | CTTTGGGGATTTTCAATCCAGGCCCTTAGATTTATGTATTGCTTGTATGTGGTCGGCATTCTGGTGCCTTaGTCTCTTGAGGTAATCGTA | + |
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Preference number: 4 (lower is better) Translates to: LWGFSIQALRFMYCLYVVGILVP*SLEVIV Trigger: TACGATTACCTCAAGAGAGCAAGGCACCAGAATGCC...GACCACATACAAGCAATACATAAATCTAAGGGCCTGGATTGAAAATCCCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR TCA 90 bp | GGATTTTCAATCCAGGCCCTTAGATTTATGTATTGCTTGTATGTGGTCACAGGATTTGGCTTTCTTGTCTaGCACCAGATAGACAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GFSIQALRFMYCLYVVTGFGFLV*HQIDSS Trigger: GGAACTGTCTATCTGGTGTCAGACAAGAAAGCCAAA...TCCTGTGACCACATACAAGCAATACATAAATCTAAGGGCCTGGATTGAAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR TCA 90 bp | AAAAGTGTTGATCAAAAATACATCATTGGAGATGAACAGGCCATTGTCCAGGCTAGCTTGCATGGAATCTaGCAATGGCAGGATGATGGA | + |
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Preference number: 4 (lower is better) Translates to: KSVDQKYIIGDEQAIVQASLHGI*QWQDDG Trigger: TCCATCATCCTGCCATTGTCAGATTCCATGCAAGCT...AGCCTGGACAATGGCCTGTTCATCTCCAATGATGTATTTTTGATCAACACTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR TCA 90 bp | AATCAAAGACATCGGAATAATATTGTTCAGCAACAAGTGGGTCTTCTGGGATCTAGCTTGCATGGAATCTaGCAATGGCAGGATGATGGA | + |
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Preference number: 4 (lower is better) Translates to: NQRHRNNIVQQQVGLLGSSLHGI*QWQDDG Trigger: TCCATCATCCTGCCATTGTCAGATTCCATGCAAGCT...AGATCCCAGAAGACCCACTTGTTGCTGAACAATATTATTCCGATGTCTTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| CDS-3UTR CCA 90 bp | CTTTGGGGATTTTCAATCCAGGCCCTTAGATTTATGTATTGCTTGTATGTGGTCTCCATGAAGCTTGCATaGAATCTGACAATGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LWGFSIQALRFMYCLYVVSMKLA*NLTMAG Trigger: TCCTGCCATTGTCAGATTCCATGCAAGCTTCATGGA...GACCACATACAAGCAATACATAAATCTAAGGGCCTGGATTGAAAATCCCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR TCA 90 bp | CTTCAGAACAGGAATCAAAGACATCGGAATAATATTGTTCAGCAACAAGTGGGTTTTGGCTTTCTTGTCTaGCACCAGATAGACAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LQNRNQRHRNNIVQQQVGFGFLV*HQIDSS Trigger: GGAACTGTCTATCTGGTGTCAGACAAGAAAGCCAAA...ACCCACTTGTTGCTGAACAATATTATTCCGATGTCTTTGATTCCTGTTCTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| CDS-3UTR CCA 90 bp | GGATTTTCAATCCAGGCCCTTAGATTTATGTATTGCTTGTATGTGGTCACAGGAACTCCAAGCAACAGCTaGATAAACCATTCTACTATC | + |
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Preference number: 4 (lower is better) Translates to: GFSIQALRFMYCLYVVTGTPSNS*INHSTI Trigger: GATAGTAGAATGGTTTATCCAGCTGTTGCTTGGAGT...TCCTGTGACCACATACAAGCAATACATAAATCTAAGGGCCTGGATTGAAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR CCA 90 bp | AAAAGTGTTGATCAAAAATACATCATTGGAGATGAACAGGCCATTGTCCAGGCTTTCCAGTGTCATCTCTaGGTATTTACACATCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KSVDQKYIIGDEQAIVQAFQCHL*VFTHQE Trigger: CTCCTGATGTGTAAATACCCAGAGATGACACTGGAA...AGCCTGGACAATGGCCTGTTCATCTCCAATGATGTATTTTTGATCAACACTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR CAA 90 bp | GTCCAGGCACGGAAGGGACTGAGGCTCAGGCAGGCTCTCCAAAGTCCGTTCATCAGCTCCTCTCCAGGTTaGGCTTTCTTGTCTGACACC | + |
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Preference number: 5 (lower is better) Translates to: VQARKGLRLRQALQSPFISSSPG*AFLSDT Trigger: GGTGTCAGACAAGAAAGCCAAACCTGGAGAGGAGCT...GATGAACGGACTTTGGAGAGCCTGCCTGAGCCTCAGTCCCTTCCGTGCCTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| CDS-3UTR CAA 90 bp | TGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGGCACTGGGCGAGCCACTGCACTGTaGAAAACCATTGGTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: CHKPASHSPWSSHWSGTGRATAL*KTIGPG Trigger: TCCTGGACCAATGGTTTTCAACAGTGCAGTGGCTCG...CCCAGTGCCTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR CAA 90 bp | GTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGAGCTCCTCTCCAGGTTaGGCTTTCTTGTCTGACACC | + |
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Preference number: 5 (lower is better) Translates to: VQAVTSQLAIVPGAHTGQSSSPG*AFLSDT Trigger: GGTGTCAGACAAGAAAGCCAAACCTGGAGAGGAGCT...CTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR CAA 90 bp | GAGGGAAAGCTTTCAGGATGCCAGACTTCATCTATGACCTTGACCTGTGACTCCCGTGTCAGACAAGGCTaGCAGAGTCTGCAGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: EGKLSGCQTSSMTLTCDSRVRQG*QSLQVK Trigger: CTTCACCTGCAGACTCTGCAAGCCTTGTCTGACACG...GGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCCTGAAAGCTTTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR CAA 90 bp | TGTCCAAGCTGTCACAAGCCAGCTAGCCATAGTCCCTGGAGCTCACACTGGTCAGAAGAACATATCTTCTaGCAATCAAAGCGGTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: CPSCHKPASHSPWSSHWSEEHIF*QSKRSG Trigger: ACCCGACCGCTTTGATTGCAAGAAGATATGTTCTTC...TGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGACAGCTTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS-3UTR CAA 90 bp | CGTCTTCTGGCCAGAGCAGGAGGGGCTGTACCTGTTGGTTTGTTCTGTACACAGGAAGAACATATCTTCTaGCAATCAAAGCGGTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: RLLARAGGAVPVGLFCTQEEHIF*QSKRSG Trigger: ACCCGACCGCTTTGATTGCAAGAAGATATGTTCTTC...CTGTGTACAGAACAAACCAACAGGTACAGCCCCTCCTGCTCTGGCCAGAAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156256.8 |
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| CDS TCA 90 bp | AGTCCAGATCTCGGCCAGCTCCTCTCCAGGTTTGGCTTTCTTGTCTaGCACCAGATAGACAGTTCCAAAACTTCCACTGCCAAGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: SPDLGQLLSRFGFLV*HQIDSSKTSTAKFL Trigger: CAGAAACTTGGCAGTGGAAGTTTTGGAACTGTCTATCTGGTGTCAGACAAGAAAGCCAAACCTGGAGAGGAGCTGGCCGAGATCTGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| CDS CCA 90 bp | CAATGGCAGGATGATGGAGCCTGGAGAGGAGCTGAGCTTCCACATTaGCCTGCACGGTCTCATTTGGATTTAATTCGCCAACAGAGATTT | + |
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Preference number: 5 (lower is better) Translates to: QWQDDGAWRGAELPH*PARSHLDLIRQQRF Trigger: AAATCTCTGTTGGCGAATTAAATCCAAATGAGACCGTGCAGGCCAATGTGGAAGCTCAGCTCCTCTCCAGGCTCCATCATCCTGCCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 |
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| CDS TCA 90 bp | GAAGAACATATCTTCTTGCAATCAAAGCGGTCGGGTACATGGGGATaGCTGTGGGTCTTCTGCCCACACACTTCGCAGTCTCTTGGAATT | + |
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Preference number: 5 (lower is better) Translates to: EEHIFLQSKRSGTWG*LWVFCPHTSQSLGI Trigger: AATTCCAAGAGACTGCGAAGTGTGTGGGCAGAAGACCCACAGTCATCCCCATGTACCCGACCGCTTTGATTGCAAGAAGATATGTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| CDS GCA 90 bp | ACAGTATTCCGTGATAATGCAAAAAGTCTCCTGCTCCATGAAGCTTaGATGGAATCTGACAATGGCAGGATGATGGAGCCTGGAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: TVFRDNAKSLLLHEA*MESDNGRMMEPGEE Trigger: CTCCTCTCCAGGCTCCATCATCCTGCCATTGTCAGATTCCATGCAAGCTTCATGGAGCAGGAGACTTTTTGCATTATCACGGAATACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 |
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| CDS-3UTR CAA 90 bp | AAAAGTGTTGATCAAAAATACATCATTGGAGATGAACAGGCCATTGTCCAGGCTCTTGGCATCATAGCCTaGGTGCTTCAGGGCCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: KSVDQKYIIGDEQAIVQALGIIA*VLQGLG Trigger: CCCGAGGCCCTGAAGCACCAAGGCTATGATGCCAAG...AGCCTGGACAATGGCCTGTTCATCTCCAATGATGTATTTTTGATCAACACTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS CCA 90 bp | CGCCAACAGAGATTTCCTTCAGTACCTTTAGCTCCTCTCCAGGTTTaGCTTTCTTGTCTGACACCAGATAGACAGTTCCAAAACTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: RQQRFPSVPLAPLQV*LSCLTPDRQFQNFH Trigger: GTGGAAGTTTTGGAACTGTCTATCTGGTGTCAGACAAGAAAGCCAAACCTGGAGAGGAGCTAAAGGTACTGAAGGAAATCTCTGTTGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 |
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| CDS-3UTR CAA 90 bp | GAGGGAAAGCTTTCAGGATGCCAGACTTCATCTATGACCTTGACCTGTGACTCCGACATCGGAATAATATaGTTCAGCAACAAGTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: EGKLSGCQTSSMTLTCDSDIGII*FSNKWV Trigger: GACCCACTTGTTGCTGAACAATATTATTCCGATGTC...GGAGTCACAGGTCAAGGTCATAGATGAAGTCTGGCATCCTGAAAGCTTTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS GCA 90 bp | TGGCTTTCTTGTCTGACACCAGATAGACAGTTCCAAAACTTCCACTaGCAAGTTTCTGCTGAAGAACATATCTTCTTGCAATCAAAGCGG | + |
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Preference number: 5 (lower is better) Translates to: WLSCLTPDRQFQNFH*QVSAEEHIFLQSKR Trigger: CCGCTTTGATTGCAAGAAGATATGTTCTTCAGCAGAAACTTGGCAGTGGAAGTTTTGGAACTGTCTATCTGGTGTCAGACAAGAAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| CDS-3UTR CAA 90 bp | AGAAACTGGAGCCAGCAAATGCATGATCCAGGCAACACATCTCATATAAAATGCGAAGAACATATCTTCTaGCAATCAAAGCGGTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: RNWSQQMHDPGNTSHIKCEEHIF*QSKRSG Trigger: ACCCGACCGCTTTGATTGCAAGAAGATATGTTCTTC...GCATTTTATATGAGATGTGTTGCCTGGATCATGCATTTGCTGGCTCCAGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| CDS-3UTR CAA 90 bp | CTTTGGGGATTTTCAATCCAGGCCCTTAGATTTATGTATTGCTTGTATGTGGTCCTCAATGAAGGACTCTaGTTCAACATGCGTTCCATG | + |
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Preference number: 5 (lower is better) Translates to: LWGFSIQALRFMYCLYVVLNEGL*FNMRSM Trigger: CATGGAACGCATGTTGAACAAGAGTCCTTCATTGAG...GACCACATACAAGCAATACATAAATCTAAGGGCCTGGATTGAAAATCCCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038648.11 |
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| CDS TCA 72 bp | ATCTTCTTGCAATCAAAGCGGTCGGGTACATGGGGATaGCTGTGGGTCTTCTGCCCACACACTTCGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: IFLQSKRSGTWG*LWVFCPHTSQS Trigger: AGACTGCGAAGTGTGTGGGCAGAAGACCCACAGTCATCCCCATGTACCCGACCGCTTTGATTGCAAGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| CDS TCA 72 bp | CTCGGCCAGCTCCTCTCCAGGTTTGGCTTTCTTGTCTaGCACCAGATAGACAGTTCCAAAACTTCCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: LGQLLSRFGFLV*HQIDSSKTSTA Trigger: GGCAGTGGAAGTTTTGGAACTGTCTATCTGGTGTCAGACAAGAAAGCCAAACCTGGAGAGGAGCTGGCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177029.8 |
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| CDS CCA 72 bp | GATGATGGAGCCTGGAGAGGAGCTGAGCTTCCACATTaGCCTGCACGGTCTCATTTGGATTTAATTCGCCAA | + |
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Preference number: 6 (lower is better) Translates to: DDGAWRGAELPH*PARSHLDLIRQ Trigger: TTGGCGAATTAAATCCAAATGAGACCGTGCAGGCCAATGTGGAAGCTCAGCTCCTCTCCAGGCTCCATCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 |
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| CDS GCA 72 bp | CGTGATAATGCAAAAAGTCTCCTGCTCCATGAAGCTTaGATGGAATCTGACAATGGCAGGATGATGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RDNAKSLLLHEA*MESDNGRMMEP Trigger: AGGCTCCATCATCCTGCCATTGTCAGATTCCATGCAAGCTTCATGGAGCAGGAGACTTTTTGCATTATCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 |
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| CDS GCA 72 bp | CCCTCACAGTATTCCGTGATAATGCAAAAAGTCTCCTaGTCCATGAAGCTTGCATGGAATCTGACAATGGCA | + |
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Preference number: 6 (lower is better) Translates to: PSQYSVIMQKVS*SMKLAWNLTMA Trigger: TGCCATTGTCAGATTCCATGCAAGCTTCATGGAGCAGGAGACTTTTTGCATTATCACGGAATACTGTGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 |
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| CDS GCA 72 bp | TGTCTGACACCAGATAGACAGTTCCAAAACTTCCACTaGCAAGTTTCTGCTGAAGAACATATCTTCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: CLTPDRQFQNFH*QVSAEEHIFLQ Trigger: TTGCAAGAAGATATGTTCTTCAGCAGAAACTTGGCAGTGGAAGTTTTGGAACTGTCTATCTGGTGTCAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 ENSMUST00000177029.8 |
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| CDS TCA 72 bp | ACTCCAAGCAACAGCTGGATAAACCATTCTACTATCTaGTTTTCAGCGAAGACTTTCCCAGCTTCTTTATAT | + |
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Preference number: 6 (lower is better) Translates to: TPSNSWINHSTI*FSAKTFPASLY Trigger: ATATAAAGAAGCTGGGAAAGTCTTCGCTGAAAATCAGATAGTAGAATGGTTTATCCAGCTGTTGCTTGGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038648.11 ENSMUST00000140851.3 ENSMUST00000156256.8 |
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