Pregenerated sensors for NEIL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032298Ensembl transcript IDs: ENSMUST00000034842.5, ENSMUST00000186410.7, ENSMUST00000190245.7
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AATGTTGAAGATGGCTTACATTTCCAACACTTTGGGAGGCAGAAGCAGGCAGATCGGCAACCATGGACATaGAGCAGAAAGACCAAACGG | + |
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Preference number: 2 (lower is better) Translates to: NVEDGLHFQHFGRQKQADRQPWT*SRKTKR Trigger: CCGTTTGGTCTTTCTGCTCCATGTCCATGGTTGCCG...ATCTGCCTGCTTCTGCCTCCCAAAGTGTTGGAAATGTAAGCCATCTTCAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCAGAAAGACCAAACGGGAGTTCAATGTCATCTTCAGATCCACATGGGTTTTAGGGATTCAGACATaGCCCAGGATTCACAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: WSRKTKREFNVIFRSTWVLGIQT*PRIHSK Trigger: CTTGCTGTGAATCCTGGGGCATGTCTGAATCCCTAA...AACCCATGTGGATCTGAAGATGACATTGAACTCCCGTTTGGTCTTTCTGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCAGGCAGATCTCTGAATTTGAGGCCAGCTTGGTCTACAGAGTGAGTTCCGAGAAACCCTTGTTTTaGAAAAGTAGACAACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: RSRQISEFEASLVYRVSSEKPLF*KSRQQQ Trigger: TTGCTGTTGTCTACTTTTTCAAAACAAGGGTTTCTC...GGAACTCACTCTGTAGACCAAGCTGGCCTCAAATTCAGAGATCTGCCTGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| 3UTR GCA 72 bp | GCAGCCCTACAAATACTGCTTTTAGGGATTCAGACATaGCCCAGGATTCACAGCAAGTCATCAGGGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: AALQILLLGIQT*PRIHSKSSGKE Trigger: CTCCTTCCCTGATGACTTGCTGTGAATCCTGGGGCATGTCTGAATCCCTAAAAGCAGTATTTGTAGGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | AGCTTGGCTCACACCTGTAACCCCGGCAACCATGGACATGGAGCAGAAAGACCACACCCTGGAACCAGATaGTACGGCCATGCCGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SLAHTCNPGNHGHGAERPHPGTR*YGHAGL Trigger: GAGACCGGCATGGCCGTACCATCTGGTTCCAGGGTG...TGGTCTTTCTGCTCCATGTCCATGGTTGCCGGGGTTACAGGTGTGAGCCAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | GCTTGGCTCACACCTGTAACCCCGGCAACCATGGACATGGAGCAGAAAGACCAACTGGCCCATAGCCTTTaGCCCCCAGCTGAACCACTT | + |
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Preference number: 4 (lower is better) Translates to: AWLTPVTPATMDMEQKDQLAHSL*PPAEPL Trigger: AAGTGGTTCAGCTGGGGGGCAAAGGCTATGGGCCAG...TTGGTCTTTCTGCTCCATGTCCATGGTTGCCGGGGTTACAGGTGTGAGCCAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | ACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCAGATGGTACGGCCATaGCGGTCTCGCAGGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TVMQEKSRGLGHAALQILQMVRP*RSRREL Trigger: GAGCTCCCTGCGAGACCGGCATGGCCGTACCATCTG...CAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTCTCCTCTCCACGCTCTaGCCCATAGCCTTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLLLSTL*PIAFAP Trigger: GGGGGCAAAGGCTATGGGCCAGAGCGTGGAGAGGAG...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | GCTTGGCTCACACCTGTAACCCCGGCAACCATGGACATGGAGCAGAAAGACCAAGCTGTAGGGGTTTCCTaGTTTTGTTGGAGGCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AWLTPVTPATMDMEQKDQAVGVS*FCWRPA Trigger: GGCCGGCCTCCAACAAAACCAGGAAACCCCTACAGC...TTGGTCTTTCTGCTCCATGTCCATGGTTGCCGGGGTTACAGGTGTGAGCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | AACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGGTCCACGGCCTGGTTaGCATTCACCCCCAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: NSYAGKVTGPRACSPTNTGPRPG*HSPPGS Trigger: GGATCCTGGGGGTGAATGGCAACCAGGCCGTGGACC...AGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTCAGATGGTACGGCCATaGCGGTCTCGCAGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YAGKVTGPRACSPTNTAFQMVRP*RSRREL Trigger: GAGCTCCCTGCGAGACCGGCATGGCCGTACCATCTG...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | ACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGGGTCCGGGATCACCCTaGAACCAGATGGTACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVMQEKSRGLGHAALQILGPGSP*NQMVRP Trigger: TGGCCGTACCATCTGGTTCCAGGGTGATCCCGGACC...CAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | CTTTGGGAGGCAGAAGCAGGCAGATCTCTGAATTTGAGGCCAGCTTGGTCTACAGGTCCGGGATCACCCTaGAACCAGATGGTACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LWEAEAGRSLNLRPAWSTGPGSP*NQMVRP Trigger: TGGCCGTACCATCTGGTTCCAGGGTGATCCCGGACC...TGTAGACCAAGCTGGCCTCAAATTCAGAGATCTGCCTGCTTCTGCCTCCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAACCTCCGGGTTCCGGCTaGCAGAGGACTTCTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKPPGSG*QRTSPH Trigger: GTGTGGAGAAGTCCTCTGTCAGCCGGAACCCGGAGG...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | ACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTGGCCCATAGCCTTTaGCCCCCAGCTGAACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TVMQEKSRGLGHAALQILLAHSL*PPAEPL Trigger: AAGTGGTTCAGCTGGGGGGCAAAGGCTATGGGCCAG...CAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTCTCGCAGGGAGCTCATaGCTGGCACACCATAGCACC | + |
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Preference number: 4 (lower is better) Translates to: YAGKVTGPRACSPTNTAFLAGSS*LAHHST Trigger: GGTGCTATGGTGTGCCAGGCATGAGCTCCCTGCGAG...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | TTGGGAGGCAGAAGCAGGCAGATCTCTGAATTTGAGGCCAGCTTGGTCTACAGACATTCACAAAGTGGCTaGCCAGGTGCAGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGGRSRQISEFEASLVYRHSQSG*PGAALG Trigger: GCCCAGAGCTGCACCTGGCCAGCCACTTTGTGAATG...TCTGTAGACCAAGCTGGCCTCAAATTCAGAGATCTGCCTGCTTCTGCCTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTGAAGACAAGGGACAGTaGCTTCTGAGGGGGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLEDKGQ*LLRGLG Trigger: TCCCAGCCCCCTCAGAAGCCACTGTCCCTTGTCTTC...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTCCCCCAGGATCCCAGTaGCCAAAGCGACGGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: YAGKVTGPRACSPTNTAFPPGSQ*PKRRMS Trigger: AGACATCCGTCGCTTTGGCCACTGGGATCCTGGGGG...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTCAGCTGGAAGGATCCTaGCATCCCAAAGCGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLQLEGS*HPKAED Trigger: GTCTTCCGCTTTGGGATGTCAGGATCCTTCCAGCTG...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTCAAGCGCAGCTCCTTaGCTCGGGCTAAAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLSSAAP*LGLKLR Trigger: TCTCAGCTTTAGCCCGAGGCAAGGAGCTGCGCTTGA...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAACTCGCAGGGAGCTCATaGCTGGCACACCATAGCACC | + |
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Preference number: 4 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKLAGSS*LAHHST Trigger: GGTGCTATGGTGTGCCAGGCATGAGCTCCCTGCGAG...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTATTCTCTTAGGAGGGTaGTTCCTGGCCCTCCGCATC | + |
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Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLILLGG*FLALRI Trigger: GATGCGGAGGGCCAGGAAGCACCCTCCTAAGAGAAT...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | AGGCAGATCTCTGAATTTGAGGCCAGCTTGGTCTACAGAGTGAGTTCCAGGACAGAAGACAAGGGACAGTaGCTTCTGAGGGGGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RQISEFEASLVYRVSSRTEDKGQ*LLRGLG Trigger: TCCCAGCCCCCTCAGAAGCCACTGTCCCTTGTCTTC...TGTCCTGGAACTCACTCTGTAGACCAAGCTGGCCTCAAATTCAGAGATCTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTCAGGGAGCTCATGCCTaGCACACCATAGCACCGAAG | + |
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Preference number: 4 (lower is better) Translates to: YAGKVTGPRACSPTNTAFQGAHA*HTIAPK Trigger: CTTCGGTGCTATGGTGTGCCAGGCATGAGCTCCCTG...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGGCAGATCTCTGAATTTGAGGCCAGCTTGGTCTACAGAGTGAGTTCCCAGGGAGCTCATGCCTaGCACACCATAGCACCGAAG | + |
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Preference number: 4 (lower is better) Translates to: RSRQISEFEASLVYRVSSQGAHA*HTIAPK Trigger: CTTCGGTGCTATGGTGTGCCAGGCATGAGCTCCCTG...GGAACTCACTCTGTAGACCAAGCTGGCCTCAAATTCAGAGATCTGCCTGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAACACCCTGGAACCAGATaGTACGGCCATGCCGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKHPGTR*YGHAGL Trigger: GAGACCGGCATGGCCGTACCATCTGGTTCCAGGGTG...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | AGGCAGATCTCTGAATTTGAGGCCAGCTTGGTCTACAGAGTGAGTTCCAGGACATCCTTGGGCACCAAGTaGCACAGTTCCAGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RQISEFEASLVYRVSSRTSLGTK*HSSSRS Trigger: AGACCTGCTGGAACTGTGTCACTTGGTGCCCAAGGA...TGTCCTGGAACTCACTCTGTAGACCAAGCTGGCCTCAAATTCAGAGATCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | ACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGGCCCCTTCAGACTGTTaGGCTATTCTCTTAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TVMQEKSRGLGHAALQILAPSDC*AILLGG Trigger: CCCTCCTAAGAGAATAGCTCAACAGTCTGAAGGGGC...CAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTGCCCCTTCAGACTGTTaGGCTATTCTCTTAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLAPSDC*AILLGG Trigger: CCCTCCTAAGAGAATAGCTCAACAGTCTGAAGGGGC...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTAGATGTGGTAGGCACTaGTCTCAAAGGGCACCTCCG | + |
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Preference number: 4 (lower is better) Translates to: YAGKVTGPRACSPTNTAFRCGRH*SQRAPP Trigger: CGGAGGTGCCCTTTGAGAGCAGTGCCTACCACATCT...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | AGGCAGATCTCTGAATTTGAGGCCAGCTTGGTCTACAGAGTGAGTTCCAGGACATCAAGCGCAGCTCCTTaGCTCGGGCTAAAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: RQISEFEASLVYRVSSRTSSAAP*LGLKLR Trigger: TCTCAGCTTTAGCCCGAGGCAAGGAGCTGCGCTTGA...TGTCCTGGAACTCACTCTGTAGACCAAGCTGGCCTCAAATTCAGAGATCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTCCGGTACAGGATCTCTaGCCGCAGATAGTTGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLPVQDL*PQIVAN Trigger: ATTGGCAACTATCTGCGGGCAGAGATCCTGTACCGG...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | CTTTGGGAGGCAGAAGCAGGCAGATCTCTGAATTTGAGGCCAGCTTGGTCTACACCGGTACAGGATCTCTaGCCGCAGATAGTTGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LWEAEAGRSLNLRPAWSTPVQDL*PQIVAN Trigger: ATTGGCAACTATCTGCGGGCAGAGATCCTGTACCGG...TGTAGACCAAGCTGGCCTCAAATTCAGAGATCTGCCTGCTTCTGCCTCCCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAACATTCACAAAGTGGCTaGCCAGGTGCAGCTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKHSQSG*PGAALG Trigger: GCCCAGAGCTGCACCTGGCCAGCCACTTTGTGAATG...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | AACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTTCTGCGGGTACCAGCTaGAAGGATCCTGACATCCCA | + |
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Preference number: 4 (lower is better) Translates to: NSYAGKVTGPRACSPTNTSAGTS*KDPDIP Trigger: TGGGATGTCAGGATCCTTCCAGCTGGTACCCGCAGA...AGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | CTTACATTTCCAACACTTTGGGAGGCAGAAGCAGGCAGATCTCTGAATTTGAGGCCCCCAGGATCCCAGTaGCCAAAGCGACGGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LTFPTLWEAEAGRSLNLRPPGSQ*PKRRMS Trigger: AGACATCCGTCGCTTTGGCCACTGGGATCCTGGGGG...CCTCAAATTCAGAGATCTGCCTGCTTCTGCCTCCCAAAGTGTTGGAAATGTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | ACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGACAAGGCCTCACAGATaGGCCGGTCAAAGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: TVMQEKSRGLGHAALQILTRPHR*AGQRLC Trigger: ACAAAGCCTTTGACCGGCCCATCTGTGAGGCCTTGT...CAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTACAAGGCCTCACAGATaGGCCGGTCAAAGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLTRPHR*AGQRLC Trigger: ACAAAGCCTTTGACCGGCCCATCTGTGAGGCCTTGT...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | AACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTTTGGCCTTGATCTTCTaGCTCAGGGTCAGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NSYAGKVTGPRACSPTNTLALIF*LRVSSG Trigger: CCCAGAGCTGACCCTGAGCCAGAAGATCAAGGCCAA...AGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGGCAGATCTCTGAATTTGAGGCCAGCTTGGTCTACAGAGTGAGTTCCTTGGCCTTGATCTTCTaGCTCAGGGTCAGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RSRQISEFEASLVYRVSSLALIF*LRVSSG Trigger: CCCAGAGCTGACCCTGAGCCAGAAGATCAAGGCCAA...GGAACTCACTCTGTAGACCAAGCTGGCCTCAAATTCAGAGATCTGCCTGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | AATGTTGAAGATGGCTTACATTTCCAACACTTTGGGAGGCAGAAGCAGGCAGATCTCCTCTCCACGCTCTaGCCCATAGCCTTTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: NVEDGLHFQHFGRQKQADLLSTL*PIAFAP Trigger: GGGGGCAAAGGCTATGGGCCAGAGCGTGGAGAGGAG...ATCTGCCTGCTTCTGCCTCCCAAAGTGTTGGAAATGTAAGCCATCTTCAACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAAGCTGTAGGGGTTTCCTaGTTTTGTTGGAGGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKAVGVS*FCWRPA Trigger: GGCCGGCCTCCAACAAAACCAGGAAACCCCTACAGC...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAACAGCTGGAAGGATCCTaGCATCCCAAAGCGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKQLEGS*HPKAED Trigger: GTCTTCCGCTTTGGGATGTCAGGATCCTTCCAGCTG...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
||
| CDS-3UTR TCA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAATCCTTGGGCACCAAGTaGCACAGTTCCAGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKSLGTK*HSSSRS Trigger: AGACCTGCTGGAACTGTGTCACTTGGTGCCCAAGGA...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAAATTCTCTTAGGAGGGTaGTTCCTGGCCCTCCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKILLGG*FLALRI Trigger: GATGCGGAGGGCCAGGAAGCACCCTCCTAAGAGAAT...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTCCATTGAAGAACCTCTaGTCCAACAAGGCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLPLKNL*SNKASQ Trigger: CTGTGAGGCCTTGTTGGACCAGAGGTTCTTCAATGG...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | GTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTAGTTGCCAATGCCATTaGAGAACCTCTGGTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VMQEKSRGLGHAALQILLSCQCH*RTSGPT Trigger: TGTTGGACCAGAGGTTCTTCAATGGCATTGGCAACT...AAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTTCTGTAGTTTGGCCTTaGTCTTCTGGCTCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YAGKVTGPRACSPTNTAFSVVWP*SSGSGS Trigger: TGACCCTGAGCCAGAAGATCAAGGCCAAACTACAGA...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTCCATTGAAGAACCTCTaGTCCAACAAGGCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YAGKVTGPRACSPTNTAFPLKNL*SNKASQ Trigger: CTGTGAGGCCTTGTTGGACCAGAGGTTCTTCAATGG...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTGCTGAACCACTTCCTTaGGCACCAAGTGACACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YAGKVTGPRACSPTNTAFAEPLP*APSDTV Trigger: AACTGTGTCACTTGGTGCCCAAGGAAGTGGTTCAGC...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
||
| CDS-3UTR TCA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTAGTTGCCAATGCCATTaGAGAACCTCTGGTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: YAGKVTGPRACSPTNTAFSCQCH*RTSGPT Trigger: TGTTGGACCAGAGGTTCTTCAATGGCATTGGCAACT...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | CTTACATTTCCAACACTTTGGGAGGCAGAAGCAGGCAGATCTCTGAATTTGAGGTCTGTAGTTTGGCCTTaGTCTTCTGGCTCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTFPTLWEAEAGRSLNLRSVVWP*SSGSGS Trigger: TGACCCTGAGCCAGAAGATCAAGGCCAAACTACAGA...CCTCAAATTCAGAGATCTGCCTGCTTCTGCCTCCCAAAGTGTTGGAAATGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR TCA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAAGGAAACGGACTTGCTTaGAAGTGGAAGGTCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKGNGLA*KWKVLF Trigger: AAAGAGGACCTTCCACTTTCAAGCAAGTCCGTTTCC...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR GCA 90 bp | AACCCTTGTTTTGAAAAAGTAGACAACAGCAAATCAGTGAGTGGAGTGTGGCAGAGATGTGGTAGGCACTaGTCTCAAAGGGCACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NPCFEKVDNSKSVSGVWQRCGRH*SQRAPP Trigger: CGGAGGTGCCCTTTGAGAGCAGTGCCTACCACATCT...CTGCCACACTCCACTCACTGATTTGCTGTTGTCTACTTTTTCAAAACAAGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
||
| CDS-3UTR TCA 90 bp | TGGAGCAGAAAGACCAAACGGGAGTTCAATGTCATCTTCAGATCCACATGGGTTGGAAACGGACTTGCTTaGAAGTGGAAGGTCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSRKTKREFNVIFRSTWVGNGLA*KWKVLF Trigger: AAAGAGGACCTTCCACTTTCAAGCAAGTCCGTTTCC...AACCCATGTGGATCTGAAGATGACATTGAACTCCCGTTTGGTCTTTCTGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CCA 90 bp | AATGTTGAAGATGGCTTACATTTCCAACACTTTGGGAGGCAGAAGCAGGCAGATGCTGAACCACTTCCTTaGGCACCAAGTGACACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NVEDGLHFQHFGRQKQADAEPLP*APSDTV Trigger: AACTGTGTCACTTGGTGCCCAAGGAAGTGGTTCAGC...ATCTGCCTGCTTCTGCCTCCCAAAGTGTTGGAAATGTAAGCCATCTTCAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
||
| CDS TCA 90 bp | GGCGTGGCGGGGCAGTGCCTCTGCGGGTACCAGCTGGAAGGATCCTaGCATCCCAAAGCGGAAGACAAGGGACAGTGGCTTCTGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVAGQCLCGYQLEGS*HPKAEDKGQWLLRG Trigger: CCCCCTCAGAAGCCACTGTCCCTTGTCTTCCGCTTTGGGATGTCAGGATCCTTCCAGCTGGTACCCGCAGAGGCACTGCCCCGCCACGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CCA 90 bp | GCCTCCCTGGGTCGGGTGTCAGGTATAGTCTTTGGGCGTCTGCGGTaGCCTGTGCTCGCCCGTTGCCCCCTCCTCTTCCCTTTCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASLGRVSGIVFGRLR*PVLARCPLLFPFSG Trigger: TCCTGAGAAAGGGAAGAGGAGGGGGCAACGGGCGAGCACAGGCCACCGCAGACGCCCAAAGACTATACCTGACACCCGACCCAGGGAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS GCA 90 bp | GGGGCTGGGACCCAGGCAGGGGGCTCAATGTCAAGCGCAGCTCCTTaGCTCGGGCTAAAGCTGAGATGTGGTAGGCACTGCTCTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGTQAGGSMSSAAP*LGLKLRCGRHCSQR Trigger: CCTTTGAGAGCAGTGCCTACCACATCTCAGCTTTAGCCCGAGGCAAGGAGCTGCGCTTGACATTGAGCCCCCTGCCTGGGTCCCAGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS GCA 90 bp | CCTGGAACCAGATGGTACGGCCATGCCGGTCTCGCAGGGAGCTCATaGCTGGCACACCATAGCACCGAAGCCAGGCTCGAAAGGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PGTRWYGHAGLAGSS*LAHHSTEARLERQQ Trigger: TTGCTGCCTTTCGAGCCTGGCTTCGGTGCTATGGTGTGCCAGGCATGAGCTCCCTGCGAGACCGGCATGGCCGTACCATCTGGTTCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CCA 90 bp | ACACAGGGTCCACGGCCTGGTTGCCATTCACCCCCAGGATCCCAGTaGCCAAAGCGACGGATGTCTACGAAGCAAAGGGCAAGCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQGPRPGCHSPPGSQ*PKRRMSTKQRASRG Trigger: TCCCCGGCTTGCCCTTTGCTTCGTAGACATCCGTCGCTTTGGCCACTGGGATCCTGGGGGTGAATGGCAACCAGGCCGTGGACCCTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CCA 90 bp | AAACGTAGATGGGCGTGGCGGGGCAGTGCCTCTGCGGGTACCAGCTaGAAGGATCCTGACATCCCAAAGCGGAAGACAAGGGACAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRRWAWRGSASAGTS*KDPDIPKRKTRDSG Trigger: GCCACTGTCCCTTGTCTTCCGCTTTGGGATGTCAGGATCCTTCCAGCTGGTACCCGCAGAGGCACTGCCCCGCCACGCCCATCTACGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CCA 90 bp | CACAGTTCCAGCAGGTCTGGGTTCTGTAGTTTGGCCTTGATCTTCTaGCTCAGGGTCAGCTCTGGGCTCGGCCGGCACTGTTGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSSSRSGFCSLALIF*LRVSSGLGRHCCRA Trigger: GGCCCTGCAACAGTGCCGGCCGAGCCCAGAGCTGACCCTGAGCCAGAAGATCAAGGCCAAACTACAGAACCCAGACCTGCTGGAACTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | GCAGCTTGGCTCACACCTGTAACCCCGGCAACCATGGACATGGAGCAGAAAGACGGGTCCACGGCCTGGTaGCCATTCACCCCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: AAWLTPVTPATMDMEQKDGSTAW*PFTPRI Trigger: GATCCTGGGGGTGAATGGCAACCAGGCCGTGGACCC...GTCTTTCTGCTCCATGTCCATGGTTGCCGGGGTTACAGGTGTGAGCCAAGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS CCA 90 bp | GAACCAGATGGTACGGCCATGCCGGTCTCGCAGGGAGCTCATGCCTaGCACACCATAGCACCGAAGCCAGGCTCGAAAGGCAGCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: EPDGTAMPVSQGAHA*HTIAPKPGSKGSKI Trigger: GATTTTGCTGCCTTTCGAGCCTGGCTTCGGTGCTATGGTGTGCCAGGCATGAGCTCCCTGCGAGACCGGCATGGCCGTACCATCTGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS TCA 90 bp | AGGAGGGTGCTTCCTGGCCCTCCGCATCCTGGAAACGGACTTGCTTaGAAGTGGAAGGTCCTCTTTCCTGTCCTCAGCCCCCAGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRVLPGPPHPGNGLA*KWKVLFPVLSPQLC Trigger: ACACAGCTGGGGGCTGAGGACAGGAAAGAGGACCTTCCACTTTCAAGCAAGTCCGTTTCCAGGATGCGGAGGGCCAGGAAGCACCCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS GCA 90 bp | CTGAACCGTTCATACTCCAGCAAGACACAGGGTCCACGGCCTGGTTaGCATTCACCCCCAGGATCCCAGTGGCCAAAGCGACGGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LNRSYSSKTQGPRPG*HSPPGSQWPKRRMS Trigger: AGACATCCGTCGCTTTGGCCACTGGGATCCTGGGGGTGAATGGCAACCAGGCCGTGGACCCTGTGTCTTGCTGGAGTATGAACGGTTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | ACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGGCCTGTGCTCGCCCGTaGCCCCCTCCTCTTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVMQEKSRGLGHAALQILACARP*PPPLPF Trigger: AAAGGGAAGAGGAGGGGGCAACGGGCGAGCACAGGC...CAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | AACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGGGTCCACGGCCTGGTaGCCATTCACCCCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: NSYAGKVTGPRACSPTNTGSTAW*PFTPRI Trigger: GATCCTGGGGGTGAATGGCAACCAGGCCGTGGACCC...AGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTGCCTGTGCTCGCCCGTaGCCCCCTCCTCTTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YAGKVTGPRACSPTNTAFACARP*PPPLPF Trigger: AAAGGGAAGAGGAGGGGGCAACGGGCGAGCACAGGC...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS TCA 90 bp | TCAGCCGGTACAGGATCTCTGCCCGCAGATAGTTGCCAATGCCATTaGAGAACCTCTGGTCCAACAAGGCCTCACAGATGGGCCGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SAGTGSLPADSCQCH*RTSGPTRPHRWAGQ Trigger: TTGACCGGCCCATCTGTGAGGCCTTGTTGGACCAGAGGTTCTTCAATGGCATTGGCAACTATCTGCGGGCAGAGATCCTGTACCGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | ACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGGTCAAGCGCAGCTCCTaGCCTCGGGCTAAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVMQEKSRGLGHAALQILVKRSS*PRAKAE Trigger: CTCAGCTTTAGCCCGAGGCAAGGAGCTGCGCTTGAC...CAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | CTTCAGATCCACATGGGTTCAAGGATAGGACATACAAAGCCCTGCCCCCAAAAAGGTTTCCTGGTTTTGTaGGAGGCCGGCCCCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQIHMGSRIGHTKPCPQKGFLVL*EAGPFR Trigger: TCTGAAGGGGCCGGCCTCCAACAAAACCAGGAAACC...TTTTTGGGGGCAGGGCTTTGTATGTCCTATCCTTGAACCCATGTGGATCTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | AATGTTGAAGATGGCTTACATTTCCAACACTTTGGGAGGCAGAAGCAGGCAGATGTCAAGCGCAGCTCCTaGCCTCGGGCTAAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NVEDGLHFQHFGRQKQADVKRSS*PRAKAE Trigger: CTCAGCTTTAGCCCGAGGCAAGGAGCTGCGCTTGAC...ATCTGCCTGCTTCTGCCTCCCAAAGTGTTGGAAATGTAAGCCATCTTCAACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | AACAGTTATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGGCCCCTTCAGACTGTaGAGCTATTCTCTTAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSYAGKVTGPRACSPTNTGPFRL*SYSLRR Trigger: CCTCCTAAGAGAATAGCTCAACAGTCTGAAGGGGCC...AGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATAACTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | TATGCAGGAAAAGTCACGGGGCCTAGGGCATGCAGCCCTACAAATACTGCTTTTTTCTGTAGTTTGGCCTaGATCTTCTGGCTCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YAGKVTGPRACSPTNTAFFCSLA*IFWLRV Trigger: GACCCTGAGCCAGAAGATCAAGGCCAAACTACAGAA...AAAAGCAGTATTTGTAGGGCTGCATGCCCTAGGCCCCGTGACTTTTCCTGCATA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | CTTACATTTCCAACACTTTGGGAGGCAGAAGCAGGCAGATCTCTGAATTTGAGGGGCCCCTTCAGACTGTaGAGCTATTCTCTTAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTFPTLWEAEAGRSLNLRGPFRL*SYSLRR Trigger: CCTCCTAAGAGAATAGCTCAACAGTCTGAAGGGGCC...CCTCAAATTCAGAGATCTGCCTGCTTCTGCCTCCCAAAGTGTTGGAAATGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS-3UTR CAA 90 bp | AACCCTTGTTTTGAAAAAGTAGACAACAGCAAATCAGTGAGTGGAGTGTGGCAGGGTTTCCTGGTTTTGTaGGAGGCCGGCCCCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NPCFEKVDNSKSVSGVWQGFLVL*EAGPFR Trigger: TCTGAAGGGGCCGGCCTCCAACAAAACCAGGAAACC...CTGCCACACTCCACTCACTGATTTGCTGTTGTCTACTTTTTCAAAACAAGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000190245.7 |
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| CDS CCA 72 bp | GGTACGGCCATGCCGGTCTCGCAGGGAGCTCATGCCTaGCACACCATAGCACCGAAGCCAGGCTCGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTAMPVSQGAHA*HTIAPKPGSKG Trigger: GCCTTTCGAGCCTGGCTTCGGTGCTATGGTGTGCCAGGCATGAGCTCCCTGCGAGACCGGCATGGCCGTACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CCA 72 bp | TGGGTGCCAAGGGTCCGGGATCACCCTGGAACCAGATaGTACGGCCATGCCGGTCTCGCAGGGAGCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: WVPRVRDHPGTR*YGHAGLAGSSC Trigger: GCATGAGCTCCCTGCGAGACCGGCATGGCCGTACCATCTGGTTCCAGGGTGATCCCGGACCCTTGGCACCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CCA 72 bp | GGTCGGGTGTCAGGTATAGTCTTTGGGCGTCTGCGGTaGCCTGTGCTCGCCCGTTGCCCCCTCCTCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRVSGIVFGRLR*PVLARCPLLFP Trigger: AGGGAAGAGGAGGGGGCAACGGGCGAGCACAGGCCACCGCAGACGCCCAAAGACTATACCTGACACCCGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CCA 72 bp | TGGGCGTGGCGGGGCAGTGCCTCTGCGGGTACCAGCTaGAAGGATCCTGACATCCCAAAGCGGAAGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WAWRGSASAGTS*KDPDIPKRKTR Trigger: CCTTGTCTTCCGCTTTGGGATGTCAGGATCCTTCCAGCTGGTACCCGCAGAGGCACTGCCCCGCCACGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
||
| CDS CAA 72 bp | AGTCTTTGGGCGTCTGCGGTGGCCTGTGCTCGCCCGTaGCCCCCTCCTCTTCCCTTTCTCAGGAGCTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLWASAVACARP*PPPLPFLRSCR Trigger: CCTACAGCTCCTGAGAAAGGGAAGAGGAGGGGGCAACGGGCGAGCACAGGCCACCGCAGACGCCCAAAGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
||
| CDS GCA 72 bp | AGATGGTACGGCCATGCCGGTCTCGCAGGGAGCTCATaGCTGGCACACCATAGCACCGAAGCCAGGCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RWYGHAGLAGSS*LAHHSTEARLE Trigger: TTCGAGCCTGGCTTCGGTGCTATGGTGTGCCAGGCATGAGCTCCCTGCGAGACCGGCATGGCCGTACCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
||
| CDS GCA 72 bp | ACCCAGGCAGGGGGCTCAATGTCAAGCGCAGCTCCTTaGCTCGGGCTAAAGCTGAGATGTGGTAGGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: TQAGGSMSSAAP*LGLKLRCGRHC Trigger: GCAGTGCCTACCACATCTCAGCTTTAGCCCGAGGCAAGGAGCTGCGCTTGACATTGAGCCCCCTGCCTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
||
| CDS CCA 72 bp | CCACGGCCTGGTTGCCATTCACCCCCAGGATCCCAGTaGCCAAAGCGACGGATGTCTACGAAGCAAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRPGCHSPPGSQ*PKRRMSTKQRA Trigger: TGCCCTTTGCTTCGTAGACATCCGTCGCTTTGGCCACTGGGATCCTGGGGGTGAATGGCAACCAGGCCGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
||
| CDS TCA 72 bp | GGGCAGTGCCTCTGCGGGTACCAGCTGGAAGGATCCTaGCATCCCAAAGCGGAAGACAAGGGACAGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GQCLCGYQLEGS*HPKAEDKGQWL Trigger: AAGCCACTGTCCCTTGTCTTCCGCTTTGGGATGTCAGGATCCTTCCAGCTGGTACCCGCAGAGGCACTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS GCA 72 bp | TCATACTCCAGCAAGACACAGGGTCCACGGCCTGGTTaGCATTCACCCCCAGGATCCCAGTGGCCAAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: SYSSKTQGPRPG*HSPPGSQWPKR Trigger: TCGCTTTGGCCACTGGGATCCTGGGGGTGAATGGCAACCAGGCCGTGGACCCTGTGTCTTGCTGGAGTATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS GCA 72 bp | TGGCTCAGGGTCAGCTCTGGGCTCGGCCGGCACTGTTaGAGGGCCTCTAGAACTGTACGAGCCTTCTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: WLRVSSGLGRHC*RASRTVRAFSK Trigger: TTTTGAGAAGGCTCGTACAGTTCTAGAGGCCCTGCAACAGTGCCGGCCGAGCCCAGAGCTGACCCTGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CAA 90 bp | CTCTTAGGAGGGTGCTTCCTGGCCCTCCGCATCCTGGAAACGGACTaGCTTGAAAGTGGAAGGTCCTCTTTCCTGTCCTCAGCCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLGGCFLALRILETD*LESGRSSFLSSAPS Trigger: GCTGGGGGCTGAGGACAGGAAAGAGGACCTTCCACTTTCAAGCAAGTCCGTTTCCAGGATGCGGAGGGCCAGGAAGCACCCTCCTAAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CAA 72 bp | CACAGTTCCAGCAGGTCTGGGTTCTGTAGTTTGGCCTaGATCTTCTGGCTCAGGGTCAGCTCTGGGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: HSSSRSGFCSLA*IFWLRVSSGLG Trigger: GCCGAGCCCAGAGCTGACCCTGAGCCAGAAGATCAAGGCCAAACTACAGAACCCAGACCTGCTGGAACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS TCA 72 bp | TCCTGGTTTTGTTGGAGGCCGGCCCCTTCAGACTGTTaGGCTATTCTCTTAGGAGGGTGCTTCCTGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SWFCWRPAPSDC*AILLGGCFLAL Trigger: GAGGGCCAGGAAGCACCCTCCTAAGAGAATAGCTCAACAGTCTGAAGGGGCCGGCCTCCAACAAAACCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CAA 72 bp | CTTCCCTTTCTCAGGAGCTGTAGGGGTTTCCTGGTTTaGTTGGAGGCCGGCCCCTTCAGACTGTTGAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LPFLRSCRGFLV*LEAGPFRLLSY Trigger: ATAGCTCAACAGTCTGAAGGGGCCGGCCTCCAACAAAACCAGGAAACCCCTACAGCTCCTGAGAAAGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS TCA 72 bp | ACAGGATCTCTGCCCGCAGATAGTTGCCAATGCCATTaGAGAACCTCTGGTCCAACAAGGCCTCACAGATGG | + |
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Preference number: 6 (lower is better) Translates to: TGSLPADSCQCH*RTSGPTRPHRW Trigger: CCATCTGTGAGGCCTTGTTGGACCAGAGGTTCTTCAATGGCATTGGCAACTATCTGCGGGCAGAGATCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CAA 90 bp | AACCTCTGGTCCAACAAGGCCTCACAGATGGGCCGGTCAAAGGCTTaGTCTGATAGGTTCCGAAGTACGTTCTCTCTGAACCGTTCATAC | + |
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Preference number: 6 (lower is better) Translates to: NLWSNKASQMGRSKA*SDRFRSTFSLNRSY Trigger: GTATGAACGGTTCAGAGAGAACGTACTTCGGAACCTATCAGACAAAGCCTTTGACCGGCCCATCTGTGAGGCCTTGTTGGACCAGAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS GCA 72 bp | CTCAAAAGGAGGGATCTTCAGCCGGTACAGGATCTCTaGCCGCAGATAGTTGCCAATGCCATTGAAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: LKRRDLQPVQDL*PQIVANAIEEP Trigger: AGGTTCTTCAATGGCATTGGCAACTATCTGCGGGCAGAGATCCTGTACCGGCTGAAGATCCCTCCTTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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| CDS CAA 72 bp | TCCAACAAGGCCTCACAGATGGGCCGGTCAAAGGCTTaGTCTGATAGGTTCCGAAGTACGTTCTCTCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: SNKASQMGRSKA*SDRFRSTFSLN Trigger: GTTCAGAGAGAACGTACTTCGGAACCTATCAGACAAAGCCTTTGACCGGCCCATCTGTGAGGCCTTGTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034842.5 ENSMUST00000186410.7 ENSMUST00000190245.7 |
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