Pregenerated sensors for NEFL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022055Ensembl transcript IDs: ENSMUST00000022639.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAATCAAGTATTTTATAAACCAACCAGATGTTTGCATTCACTCATaGCTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCT | + |
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Preference number: 1 (lower is better) Translates to: SIKYFINQPDVCIHS*LTCVKSLQTRNFLS Trigger: AGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGTCATGAGTGAATGCAAACATCTGGTTGGTTTATAAAATACTTGATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR CAA 90 bp | GCAGACAACACACCATTCATGAGCTCAGGATTCCAGGCAACATGTTaGCAGTGGCAGATAACCTCTGATAATCTTACTCCTCTCCGCCCC | + |
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Preference number: 2 (lower is better) Translates to: ADNTPFMSSGFQATC*QWQITSDNLTPLRP Trigger: GGGGCGGAGAGGAGTAAGATTATCAGAGGTTATCTGCCACTGCAAACATGTTGCCTGGAATCCTGAGCTCATGAATGGTGTGTTGTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR GCA 90 bp | ATGACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGACATAAGCATGGACCATaGACAGGCTGGCAGCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: MTDMCEKLADKELPIYKGHKHGP*TGWQQA Trigger: GGCTTGCTGCCAGCCTGTGCATGGTCCATGCTTATG...TCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR TCA 90 bp | ATGACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAGTGATGAGGTTGACCTaGTTGGGGAGAACTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: MTDMCEKLADKELPIYKGVMRLT*LGRTFP Trigger: AGGAAAAGTTCTCCCCAATCAGGTCAACCTCATCAC...TCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGCGTAAGGAGGAAATTCATAGCACAACATTGAAAGTCCAACCTAAGTCAGATCTGGAACTCAACTaGTTGGTTGGTGATGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TLRKEEIHSTTLKVQPKSDLELN*LVGDEV Trigger: AACCTCATCACCAACCAACCAGTTGAGTTCCAGATC...TGACTTAGGTTGGACTTTCAATGTTGTGCTATGAATTTCCTCCTTACGCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAATGCCAAGAGCCTTCATAGTTCAAACTCACATCATGATAAAGAAATGCTGGAACTCAACTGGTTaGTTGGTGATGAGGTTGACC | + |
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Preference number: 2 (lower is better) Translates to: KGMPRAFIVQTHIMIKKCWNSTG*LVMRLT Trigger: GGTCAACCTCATCACCAACCAACCAGTTGAGTTCCA...GCATTTCTTTATCATGATGTGAGTTTGAACTATGAAGGCTCTTGGCATTCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATGGTGTGTTTTGCATGCTaGATGACGCTCTTATTTATG | + |
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Preference number: 2 (lower is better) Translates to: TDMCEKLADKELPIYKGMVCFAC*MTLLFM Trigger: CATAAATAAGAGCGTCATTCAGCATGCAAAACACAC...CATTCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATGCCAATTCATAGCACAACATTaGAAGTCCAACCTAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: TCVKSLQTRNFLSTKECQFIAQH*KSNLSH Trigger: ATGACTTAGGTTGGACTTTCAATGTTGTGCTATGAA...TTGGCATTCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATGTTACCAATTAAGACATaGAGAGCAATACCAATGCAG | + |
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Preference number: 2 (lower is better) Translates to: TDMCEKLADKELPIYKGMLPIKT*RAIPMQ Trigger: CTGCATTGGTATTGCTCTGCATGTCTTAATTGGTAA...CATTCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR CCA 90 bp | ATGACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAAATTTGTATAGGATCTaGAACTCAACTGGTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: MTDMCEKLADKELPIYKGNLYRI*NSTGWL Trigger: CAACCAACCAGTTGAGTTCCAGATCCTATACAAATT...TCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR CAA 90 bp | GGAACTGTGTTCTTCAATCAAGTATTTTATAAACCAACCAGATGTTaGCATTCACTCATGACTGACATGTGTGAAAAGCTTGCAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: GTVFFNQVFYKPTRC*HSLMTDMCEKLADK Trigger: CTTGTCTGCAAGCTTTTCACACATGTCAGTCATGAGTGAATGCAAACATCTGGTTGGTTTATAAAATACTTGATTGAAGAACACAGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAATGCCAAGAGCCTTCATAGTTCAAACTCACATCATGATAAAGAAATGCTGTCCAACCAGGCATTaGAATCCAAATAGTTACCAA | + |
|
Preference number: 2 (lower is better) Translates to: KGMPRAFIVQTHIMIKKCCPTRH*NPNSYQ Trigger: TTGGTAACTATTTGGATTTCAATGCCTGGTTGGACA...GCATTTCTTTATCATGATGTGAGTTTGAACTATGAAGGCTCTTGGCATTCCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR CCA 72 bp | AAGCTTTGTCGTGGCTTTACCATGGATGTGGATGGATaGGGGAAAGATGATGTAGTGTCCAACCAGGCATTG | + |
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Preference number: 3 (lower is better) Translates to: KLCRGFTMDVDG*GKDDVVSNQAL Trigger: CAATGCCTGGTTGGACACTACATCATCTTTCCCCCATCCATCCACATCCATGGTAAAGCCACGACAAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR CAA 90 bp | AACCACCGTGACAACTGTGTGGGATTCATAGTCCATCCAGGTTGCACTACTATACTGGAACTCAACTGGTaGGTTGGTGATGAGGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: NHRDNCVGFIVHPGCTTILELNW*VGDEVD Trigger: GTCAACCTCATCACCAACCAACCAGTTGAGTTCCAG...TATAGTAGTGCAACCTGGATGGACTATGAATCCCACACAGTTGTCACGGTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR CCA 72 bp | TTCATGAGCTCAGGATTCCAGGCAACATGTTTGCAGTaGCAGATAACCTCTGATAATCTTACTCCTCTCCGC | + |
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Preference number: 3 (lower is better) Translates to: FMSSGFQATCLQ*QITSDNLTPLR Trigger: GCGGAGAGGAGTAAGATTATCAGAGGTTATCTGCCACTGCAAACATGTTGCCTGGAATCCTGAGCTCATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR TCA 72 bp | TGGAACTCAACTGGTTGGTTGGTGATGAGGTTGACCTaGTTGGGGAGAACTTTTCCTGGAATAGTTGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: WNSTGWLVMRLT*LGRTFPGIVGN Trigger: ATTCCCAACTATTCCAGGAAAAGTTCTCCCCAATCAGGTCAACCTCATCACCAACCAACCAGTTGAGTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR TCA 72 bp | GCCATCCCTCCAGCTAGCATTGTGTGTTTTGCATGCTaGATGACGCTCTTATTTATGAATGGTCTCATTCAT | + |
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Preference number: 3 (lower is better) Translates to: AIPPASIVCFAC*MTLLFMNGLIH Trigger: ATGAATGAGACCATTCATAAATAAGAGCGTCATTCAGCATGCAAAACACACAATGCTAGCTGGAGGGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR CAA 90 bp | AACCACCGTGACAACTGTGTGGGATTCATAGTCCATCCAGGTTGCACTACTATAATTTTTCCCATGAGGTaGCACATGAACATTAGTGAA | + |
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Preference number: 3 (lower is better) Translates to: NHRDNCVGFIVHPGCTTIIFPMR*HMNISE Trigger: TTCACTAATGTTCATGTGCAACCTCATGGGAAAAAT...TATAGTAGTGCAACCTGGATGGACTATGAATCCCACACAGTTGTCACGGTGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR-3UTR CAA 90 bp | ATGACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATTCATAGCACAACATaGAAAGTCCAACCTAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: MTDMCEKLADKELPIYKGIHSTT*KVQPKS Trigger: TGACTTAGGTTGGACTTTCAATGTTGTGCTATGAAT...TCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR TCA 72 bp | TATTTTATAAACCAACCAGATGTTTGCATTCACTCATaGCTGACATGTGTGAAAAGCTTGCAGACAAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: YFINQPDVCIHS*LTCVKSLQTRN Trigger: GTTCCTTGTCTGCAAGCTTTTCACACATGTCAGTCATGAGTGAATGCAAACATCTGGTTGGTTTATAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR TCA 72 bp | AGGGTTTTTAAATGTATAGCATCAAAGGCAATTATGTaGGGCAGTAGAATTAAGCAGACAACACACCATTCA | + |
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Preference number: 3 (lower is better) Translates to: RVFKCIASKAIM*GSRIKQTTHHS Trigger: TGAATGGTGTGTTGTCTGCTTAATTCTACTGCCTCACATAATTGCCTTTGATGCTATACATTTAAAAACCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| 3UTR TCA 72 bp | CCTATTTGTGTAGTAACATATTCAAGTAGAGGTAAGTaGAACAAAGAGACTTCAATTGCAGATCACTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: PICVVTYSSRGK*NKETSIADHFS Trigger: ACTGAAGTGATCTGCAATTGAAGTCTCTTTGTTTCACTTACCTCTACTTGAATATGTTACTACACAAATAGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | GAACTCAACTGGTTGGTTGGTGATGAGGTTGACCTGATTGGGGAGAACTTTTCCACGCGGAGCGCGCCGTaGTGTAGCCGCTGCGCACGC | + |
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Preference number: 4 (lower is better) Translates to: ELNWLVGDEVDLIGENFSTRSAP*CSRCAR Trigger: GCGTGCGCAGCGGCTACAGCACGGCGCGCTCCGCGT...GGAAAAGTTCTCCCCAATCAGGTCAACCTCATCACCAACCAACCAGTTGAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR CCA 90 bp | AACCACCGTGACAACTGTGTGGGATTCATAGTCCATCCAGGTTGCACTACTATAAGCCGCTGCGCACGCTaGAGATGTGCACCCGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: NHRDNCVGFIVHPGCTTISRCAR*RCAPGA Trigger: CGCCCCGGGTGCACATCTCCAGCGTGCGCAGCGGCT...TATAGTAGTGCAACCTGGATGGACTATGAATCCCACACAGTTGTCACGGTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | AACCACCGTGACAACTGTGTGGGATTCATAGTCCATCCAGGTTGCACTACTATACGCACGCTGGAGATGTaGACCCGGGGCGTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: NHRDNCVGFIVHPGCTTIRTLEM*TRGVST Trigger: TGTGGAGACGCCCCGGGTGCACATCTCCAGCGTGCG...TATAGTAGTGCAACCTGGATGGACTATGAATCCCACACAGTTGTCACGGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | ATGAGCTCAGGATTCCAGGCAACATGTTTGCAGTGGCAGATAACCTCTGATAATCCCTCGCGCTCGCCCTaGAGCGCCTGCTTCTCGTTA | + |
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Preference number: 4 (lower is better) Translates to: MSSGFQATCLQWQITSDNPSRSP*SACFSL Trigger: TAACGAGAAGCAGGCGCTGCAGGGCGAGCGCGAGGG...ATTATCAGAGGTTATCTGCCACTGCAAACATGTTGCCTGGAATCCTGAGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | AACCACCGTGACAACTGTGTGGGATTCATAGTCCATCCAGGTTGCACTACTATACCTCATCCGCACCTTTaGGCGCTTCCATCAGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: NHRDNCVGFIVHPGCTTIPHPHL*ALPSAG Trigger: GCCGGCTGATGGAAGCGCGCAAAGGTGCGGATGAGG...TATAGTAGTGCAACCTGGATGGACTATGAATCCCACACAGTTGTCACGGTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR TCA 90 bp | TGTTTGCATTCACTCATGACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTGAGCGCGGATGTCCTTaGGAGCGGCGGAGAGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: CLHSLMTDMCEKLADKELERGCP*ERRRGR Trigger: CCGACCTCTCCGCCGCTCTCAAGGACATCCGCGCTC...AAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGTCATGAGTGAATGCAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR CCA 90 bp | AACCACCGTGACAACTGTGTGGGATTCATAGTCCATCCAGGTTGCACTACTATACAGCGTCGGTGTTCTTaGCGGCGCTCTCGGTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: NHRDNCVGFIVHPGCTTIQRRCS*RRSRLA Trigger: TGCTAACCGAGAGCGCCGCCAAGAACACCGACGCTG...TATAGTAGTGCAACCTGGATGGACTATGAATCCCACACAGTTGTCACGGTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR CCA 90 bp | ACTCTGCGTAAGGAGGAAATTCATAGCACAACATTGAAAGTCCAACCTAAGTCACCGACACCTCGTCCTTaGCAGCGCGCACAGCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: TLRKEEIHSTTLKVQPKSPTPRP*QRAQRR Trigger: CCGACGCTGTGCGCGCTGCCAAGGACGAGGTGTCGG...TGACTTAGGTTGGACTTTCAATGTTGTGCTATGAATTTCCTCCTTACGCAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | ACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATGAGCTGGACGAGTAGCTaGGGCGCACGGACAGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: TDMCEKLADKELPIYKGMSWTSS*GARTAR Trigger: CCTCGCTGTCCGTGCGCCGCAGCTACTCGTCCAGCT...CATTCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | ACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATGCCAACCGTGCTGTAGCCGCTaGGCACGCTGGAGATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: TCVKSLQTRNFLSTKECQPCCSR*ARWRCA Trigger: TGCACATCTCCAGCGTGCGCAGCGGCTACAGCACGG...TTGGCATTCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | AGAGCTGTAGATAGGCAAAGACGTCATCTATATTCCACACCAAACACAAGTAGTAGCGAGCCTGCAGGTTaGGCAGAGTCTCCTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RAVDRQRRHLYSTPNTSSSEPAG*AESPPA Trigger: GGCTGGAGGAGACTCTGCGCAACCTGCAGGCTCGCT...ACTACTTGTGTTTGGTGTGGAATATAGATGACGTCTTTGCCTATCTACAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR CCA 90 bp | AAATCAACAAACCAAGCAGTTCCTAGGAACATCAGAGCCGCAGAAGTACAACAGTCAAAGAGCCAGAGCTaGACGAGTAGCTGCGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: KSTNQAVPRNIRAAEVQQSKSQS*TSSCGA Trigger: TGCGCCGCAGCTACTCGTCCAGCTCTGGCTCTTTGA...CTGTTGTACTTCTGCGGCTCTGATGTTCCTAGGAACTGCTTGGTTTGTTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR TCA 90 bp | CCCGATATTCAAGGATATATTAAAAATGTAACCACCGTGACAACTGTGTGGGATCGTGCACGCGCTCGATaGAGCTGGCGAAGCGATCGT | + |
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Preference number: 4 (lower is better) Translates to: PDIQGYIKNVTTVTTVWDRARAR*SWRSDR Trigger: ACGATCGCTTCGCCAGCTTCATCGAGCGCGTGCACG...ATCCCACACAGTTGTCACGGTGGTTACATTTTTAATATATCCTTGAATATCGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | AGAGCTGTAGATAGGCAAAGACGTCATCTATATTCCACACCAAACACAAGTAGTTGCTGCTCCAGCTCGTaGACGCGCTCGATGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RAVDRQRRHLYSTPNTSSCCSSS*TRSMKL Trigger: CAGCTTCATCGAGCGCGTGCACGAGCTGGAGCAGCA...ACTACTTGTGTTTGGTGTGGAATATAGATGACGTCTTTGCCTATCTACAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | ATGACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAAGGACCTTGTTCTGCTaGTCCAGCTCGTGCACGCGC | + |
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Preference number: 4 (lower is better) Translates to: MTDMCEKLADKELPIYKGRTLFC*SSSCTR Trigger: GCGCGTGCACGAGCTGGAGCAGCAGAACAAGGTCCT...TCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | GAACTCAACTGGTTGGTTGGTGATGAGGTTGACCTGATTGGGGAGAACTTTTCCGCGATCTCTTCCTCGTaGACCTTCTTCAGGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: ELNWLVGDEVDLIGENFSAISSS*TFFRKA Trigger: AGCTTTCCTGAAGAAGGTGCACGAGGAAGAGATCGC...GGAAAAGTTCTCCCCAATCAGGTCAACCTCATCACCAACCAACCAGTTGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR CCA 90 bp | ACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATGCCAACGGAGAGGTCGGGCTTaGAGGACACGTCCATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TCVKSLQTRNFLSTKECQRRGRA*RTRPSP Trigger: TGGAGATGGACGTGTCCTCCAAGCCCGACCTCTCCG...TTGGCATTCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | TGTTTGCATTCACTCATGACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCACTCTTCGGCGTTCTaGATGTTCTTGGCGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CLHSLMTDMCEKLADKELHSSAF*MFLAAS Trigger: GCTGGCCGCCAAGAACATGCAGAACGCCGAAGAGTG...AAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGTCATGAGTGAATGCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | AAATCAACAAACCAAGCAGTTCCTAGGAACATCAGAGCCGCAGAAGTACAACAGTCTAGCTCCTGCAGCTaGTTCTCCAGAGCTTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: KSTNQAVPRNIRAAEVQQSSSCS*FSRASF Trigger: GAACGAAGCTCTGGAGAAGCAGCTGCAGGAGCTAGA...CTGTTGTACTTCTGCGGCTCTGATGTTCCTAGGAACTGCTTGGTTTGTTGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | ATGAGCTCAGGATTCCAGGCAACATGTTTGCAGTGGCAGATAACCTCTGATAATTTCTTCTTAGCCACCTaGTCCTCTCCAGCACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: MSSGFQATCLQWQITSDNFFLAT*SSPALS Trigger: GGAGAGTGCTGGAGAGGAGCAGGTGGCTAAGAAGAA...ATTATCAGAGGTTATCTGCCACTGCAAACATGTTGCCTGGAATCCTGAGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR TCA 90 bp | CCCGATATTCAAGGATATATTAAAAATGTAACCACCGTGACAACTGTGTGGGATGCCAGCTTCTCGTACTaGGCGCGGATGTCCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: PDIQGYIKNVTTVTTVWDASFSY*ARMSLR Trigger: TCTCAAGGACATCCGCGCTCAGTACGAGAAGCTGGC...ATCCCACACAGTTGTCACGGTGGTTACATTTTTAATATATCCTTGAATATCGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | CAGTCGTCCACTTACCTATGGTTTATGTTGGTGCCTTATTTAAGGTACTTTAATAGATCGCGGATCTCCTaGTCGTACAGGGCGCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QSSTYLWFMLVPYLRYFNRSRIS*SYRARK Trigger: CTTCCGCGCCCTGTACGAGCAGGAGATCCGCGATCT...ATTAAAGTACCTTAAATAAGGCACCAACATAAACCATAGGTAAGTGGACGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR CCA 90 bp | AGAGCTGTAGATAGGCAAAGACGTCATCTATATTCCACACCAAACACAAGTAGTCTGATGGCGGCTACCTaGCTCAGATCGAGATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RAVDRQRRHLYSTPNTSSLMAAT*LRSRFS Trigger: GGAGAATCTCGATCTGAGCCAGGTAGCCGCCATCAG...ACTACTTGTGTTTGGTGTGGAATATAGATGACGTCTTTGCCTATCTACAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | AAAGGAATGCCAAGAGCCTTCATAGTTCAAACTCACATCATGATAAAGAAATGCTCCAGGACCTTGTTCTaGTGCTCCAGCTCGTGCACG | + |
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Preference number: 4 (lower is better) Translates to: KGMPRAFIVQTHIMIKKCSRTLF*CSSSCT Trigger: CGTGCACGAGCTGGAGCAGCAGAACAAGGTCCTGGA...GCATTTCTTTATCATGATGTGAGTTTGAACTATGAAGGCTCTTGGCATTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS-3UTR GCA 90 bp | ATGAGCTCAGGATTCCAGGCAACATGTTTGCAGTGGCAGATAACCTCTGATAATACATCAAGTAGGAGCTaGTCTGCAAGCCACTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSSGFQATCLQWQITSDNTSSRS*SASHCK Trigger: CTTACAGTGGCTTGCAGAGCAGCTCCTACTTGATGT...ATTATCAGAGGTTATCTGCCACTGCAAACATGTTGCCTGGAATCCTGAGCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAATGCCAAGAGCCTTCATAGTTCAAACTCACATCATGATAAAGAAATGCGGCTCAGAGTGTTTCTaGCGCAGCACCAACAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KGMPRAFIVQTHIMIKKCGSECF*RSTNSS Trigger: CGAGCTGTTGGTGCTGCGCCAGAAACACTCTGAGCC...GCATTTCTTTATCATGATGTGAGTTTGAACTATGAAGGCTCTTGGCATTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| 3UTR CAA 72 bp | ATCTATATTCCACACCAAACACAAGTAGTGCAAGCTTaGTCGTGGCTTTACCATGGATGTGGATGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IYIPHQTQVVQA*SWLYHGCGWMG Trigger: CCCCATCCATCCACATCCATGGTAAAGCCACGACAAAGCTTGCACTACTTGTGTTTGGTGTGGAATATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAATGCCAAGAGCCTTCATAGTTCAAACTCACATCATGATAAAGAAATGCGAGGTCCTGCAGCTGTaGCTTCTCTTGTGTGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGMPRAFIVQTHIMIKKCEVLQL*LLLCAD Trigger: ATCCGCACACAAGAGAAGGCACAGCTGCAGGACCTC...GCATTTCTTTATCATGATGTGAGTTTGAACTATGAAGGCTCTTGGCATTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| 3UTR CAA 72 bp | ACACCATTCATGAGCTCAGGATTCCAGGCAACATGTTaGCAGTGGCAGATAACCTCTGATAATCTTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPFMSSGFQATC*QWQITSDNLTP Trigger: AGGAGTAAGATTATCAGAGGTTATCTGCCACTGCAAACATGTTGCCTGGAATCCTGAGCTCATGAATGGTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGTAGATAGGCAAAGACGTCATCTATATTCCACACCAAACACAAGTAGTCCTCTTCAGATTCTTTaGTGTCTTCCTCCTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAVDRQRRHLYSTPNTSSPLQIL*CLPPHP Trigger: AGGGTGAGGAGGAAGACACCAAAGAATCTGAAGAGG...ACTACTTGTGTTTGGTGTGGAATATAGATGACGTCTTTGCCTATCTACAGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGTAGATAGGCAAAGACGTCATCTATATTCCACACCAAACACAAGTAGTGAGTTTTCTGTAAGCTaGAATCTCGATGTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAVDRQRRHLYSTPNTSSEFSVS*NLDVQG Trigger: GCCTTGGACATCGAGATTGCAGCTTACAGAAAACTC...ACTACTTGTGTTTGGTGTGGAATATAGATGACGTCTTTGCCTATCTACAGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| 3UTR CAA 72 bp | CCACTGAAGATTCAAGTTACTATTTTTCCCATGAGGTaGCACATGAACATTAGTGAATTCATTTATTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKIQVTIFPMR*HMNISEFIYSC Trigger: ACACGAATAAATGAATTCACTAATGTTCATGTGCAACCTCATGGGAAAAATAGTAACTTGAATCTTCAGTGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | GCTTCTCCAGCTCGGCGCGGGCGAGCGCGGCCTCATCCGCACCTTTaGGCGCTTCCATCAGCCGGCCCTCGGCGTCCTCGCGGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASPARRGRARPHPHL*ALPSAGPRRPRGSA Trigger: TGCTGAGCCGCGAGGACGCCGAGGGCCGGCTGATGGAAGCGCGCAAAGGTGCGGATGAGGCCGCGCTCGCCCGCGCCGAGCTGGAGAAGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CCA 90 bp | AGCTGCGGCGCACGGACAGCGAGGAGGAGACCGGCGCGGAGTAGCTaGAGTACGCGGAGCGCGCCGTGCTGTAGCCGCTGCGCACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCGARTARRRPARSS*STRSAPCCSRCARW Trigger: CCAGCGTGCGCAGCGGCTACAGCACGGCGCGCTCCGCGTACTCCAGCTACTCCGCGCCGGTCTCCTCCTCGCTGTCCGTGCGCCGCAGCT 73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | GCGCGGAGTAGCTGGAGTACGCGGAGCGCGCCGTGCTGTAGCCGCTaGGCACGCTGGAGATGTGCACCCGGGGCGTCTCCACATAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSSWSTRSAPCCSR*ARWRCAPGASPHSA Trigger: GGCGCTATGTGGAGACGCCCCGGGTGCACATCTCCAGCGTGCGCAGCGGCTACAGCACGGCGCGCTCCGCGTACTCCAGCTACTCCGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | AGGAGGAGACCGGCGCGGAGTAGCTGGAGTACGCGGAGCGCGCCGTaGTGTAGCCGCTGCGCACGCTGGAGATGTGCACCCGGGGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRPARSSWSTRSAP*CSRCARWRCAPGAS Trigger: AGACGCCCCGGGTGCACATCTCCAGCGTGCGCAGCGGCTACAGCACGGCGCGCTCCGCGTACTCCAGCTACTCCGCGCCGGTCTCCTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CCA 90 bp | AGCTGGAGTACGCGGAGCGCGCCGTGCTGTAGCCGCTGCGCACGCTaGAGATGTGCACCCGGGGCGTCTCCACATAGCGCCGCTTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWSTRSAPCCSRCAR*RCAPGASPHSAACR Trigger: CCTACAAGCGGCGCTATGTGGAGACGCCCCGGGTGCACATCTCCAGCGTGCGCAGCGGCTACAGCACGGCGCGCTCCGCGTACTCCAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | GATTCTCCAGGCTGGGCATCAAAGAGCCAGAGCTGGACGAGTAGCTaGGGCGCACGGACAGCGAGGAGGAGACCGGCGCGGAGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSPGWASKSQSWTSS*GARTARRRPARSSW Trigger: CCAGCTACTCCGCGCCGGTCTCCTCCTCGCTGTCCGTGCGCCGCAGCTACTCGTCCAGCTCTGGCTCTTTGATGCCCAGCCTGGAGAATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | CGTGCACCTTCTTCAGGAAAGCTATCTCGTCCATCAGGCTGTCGATaGGCTTCTCCAGCTCGGCGCGGGCGAGCGCGGCCTCATCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAPSSGKLSRPSGCR*ASPARRGRARPHPH Trigger: GTGCGGATGAGGCCGCGCTCGCCCGCGCCGAGCTGGAGAAGCGCATCGACAGCCTGATGGACGAGATAGCTTTCCTGAAGAAGGTGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CCA 90 bp | GGCTCAGATCGAGATTCTCCAGGCTGGGCATCAAAGAGCCAGAGCTaGACGAGTAGCTGCGGCGCACGGACAGCGAGGAGGAGACCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSDRDSPGWASKSQS*TSSCGARTARRRPA Trigger: CGCCGGTCTCCTCCTCGCTGTCCGTGCGCCGCAGCTACTCGTCCAGCTCTGGCTCTTTGATGCCCAGCCTGGAGAATCTCGATCTGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | TTCTGGCGCAGCACCAACAGCTCGGCTTCCAGGACCTTGTTCTGCTaGTCCAGCTCGTGCACGCGCTCGATGAAGCTGGCGAAGCGATCG | + |
|
Preference number: 5 (lower is better) Translates to: FWRSTNSSASRTLFC*SSSCTRSMKLAKRS Trigger: CGATCGCTTCGCCAGCTTCATCGAGCGCGTGCACGAGCTGGAGCAGCAGAACAAGGTCCTGGAAGCCGAGCTGTTGGTGCTGCGCCAGAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CCA 90 bp | TCCTGCTCGTACAGGGCGCGGAAGCGGGAAGGCTCAGAGTGTTTCTaGCGCAGCACCAACAGCTCGGCTTCCAGGACCTTGTTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSYRARKREGSECF*RSTNSSASRTLFCC Trigger: GCAGCAGAACAAGGTCCTGGAAGCCGAGCTGTTGGTGCTGCGCCAGAAACACTCTGAGCCTTCCCGCTTCCGCGCCCTGTACGAGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | TGTTTCTGGCGCAGCACCAACAGCTCGGCTTCCAGGACCTTGTTCTaGTGCTCCAGCTCGTGCACGCGCTCGATGAAGCTGGCGAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: CFWRSTNSSASRTLF*CSSSCTRSMKLAKR Trigger: TCGCTTCGCCAGCTTCATCGAGCGCGTGCACGAGCTGGAGCAGCAGAACAAGGTCCTGGAAGCCGAGCTGTTGGTGCTGCGCCAGAAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | TCGTGCACGCGCTCGATGAAGCTGGCGAAGCGATCGTTGAGGTCCTaGAGCTGTGCCTTCTCTTGTGTGCGGATAGACTTGAGGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCTRSMKLAKRSLRS*SCAFSCVRIDLRSL Trigger: CAACGACCTCAAGTCTATCCGCACACAAGAGAAGGCACAGCTGCAGGACCTCAACGATCGCTTCGCCAGCTTCATCGAGCGCGTGCACGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | TCCTGCATGGCGCTAATGTCTGCATTCTGCTTGTCCTCTAGCTCCTaGAGCTGCTTCTCCAGAGCTTCGTTCATACCCCGGCAGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SCMALMSAFCLSSSS*SCFSRASFIPRQAS Trigger: CGAAGCCTGCCGGGGTATGAACGAAGCTCTGGAGAAGCAGCTGCAGGAGCTAGAGGACAAGCAGAATGCAGACATTAGCGCCATGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | TGGTATAGTAGGCTGGGAAAGAGCGAGCAGACATCAAGTAGGAGCTaGTCTGCAAGCCACTGTAAGCAGAACGGCCGAAGACCTGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WYSRLGKSEQTSSRS*SASHCKQNGRRPAS Trigger: GCTCGCAGGTCTTCGGCCGTTCTGCTTACAGTGGCTTGCAGAGCAGCTCCTACTTGATGTCTGCTCGCTCTTTCCCAGCCTACTATACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CCA 90 bp | TCTTGTGTGCGGATAGACTTGAGGTCGTTGCTGATGGCGGCTACCTaGCTCAGATCGAGATTCTCCAGGCTGGGCATCAAAGAGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCVRIDLRSLLMAAT*LRSRFSRLGIKEPE Trigger: CTCTGGCTCTTTGATGCCCAGCCTGGAGAATCTCGATCTGAGCCAGGTAGCCGCCATCAGCAACGACCTCAAGTCTATCCGCACACAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CCA 90 bp | CCTCAATGGTCTCCTCGACCTCTGTCTGCTCTTCCTGGACGTGGCTaGTATAGTAGGCTGGGAAAGAGCGAGCAGACATCAAGTAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQWSPRPLSALPGRG*YSRLGKSEQTSSRS Trigger: GCTCCTACTTGATGTCTGCTCGCTCTTTCCCAGCCTACTATACCAGCCACGTCCAGGAAGAGCAGACAGAGGTCGAGGAGACCATTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | GAACTCAACTGGTTGGTTGGTGATGAGGTTGACCTGATTGGGGAGAACTTTTCCGCCTCATCCGCACCTTaGCGCGCTTCCATCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ELNWLVGDEVDLIGENFSASSAP*RASISR Trigger: CCGGCTGATGGAAGCGCGCAAAGGTGCGGATGAGGC...GGAAAAGTTCTCCCCAATCAGGTCAACCTCATCACCAACCAACCAGTTGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAACAAACCAAGCAGTTCCTAGGAACATCAGAGCCGCAGAAGTACAACAGACAGCGTCGGTGTTCTaGGCGGCGCTCTCGGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSTNQAVPRNIRAAEVQQTASVF*AALSVS Trigger: GCTAACCGAGAGCGCCGCCAAGAACACCGACGCTGT...CTGTTGTACTTCTGCGGCTCTGATGTTCCTAGGAACTGCTTGGTTTGTTGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | ACTGACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATGTCCGACACCTCGTCCTaGGCAGCGCGCACAGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: TDMCEKLADKELPIYKGMSDTSS*AARTAS Trigger: CGACGCTGTGCGCGCTGCCAAGGACGAGGTGTCGGA...CATTCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAACAAACCAAGCAGTTCCTAGGAACATCAGAGCCGCAGAAGTACAACAGTCCAGGGTCTTAGCCTaGAGCAGGCGGCGGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSTNQAVPRNIRAAEVQQSRVLA*SRRRLS Trigger: GGAAAGCCGCCGCCTGCTCAAGGCTAAGACCCTGGA...CTGTTGTACTTCTGCGGCTCTGATGTTCCTAGGAACTGCTTGGTTTGTTGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 90 bp | CTCTTCGTGCTTCTCAGCTCATTCTCCAGTTTGTTGATTGTGTCCTaGATGGCGCTAATGTCTGCATTCTGCTTGTCCTCTAGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFVLLSSFSSLLIVS*MALMSAFCLSSSSC Trigger: GCAGGAGCTAGAGGACAAGCAGAATGCAGACATTAGCGCCATGCAGGACACAATCAACAAACTGGAGAATGAGCTGAGAAGCACGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | ACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATGCCAACTGGCGAAGCGATCGTaGAGGTCCTGCAGCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TCVKSLQTRNFLSTKECQLAKRS*RSCSCA Trigger: GGCACAGCTGCAGGACCTCAACGATCGCTTCGCCAG...TTGGCATTCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAACAAACCAAGCAGTTCCTAGGAACATCAGAGCCGCAGAAGTACAACAGACGGTGAAGCGGCTCTaGAACCACTCTTCGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSTNQAVPRNIRAAEVQQTVKRL*NHSSAF Trigger: GAACGCCGAAGAGTGGTTCAAGAGCCGCTTCACCGT...CTGTTGTACTTCTGCGGCTCTGATGTTCCTAGGAACTGCTTGGTTTGTTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAACAAACCAAGCAGTTCCTAGGAACATCAGAGCCGCAGAAGTACAACAGATAGACTTGAGGTCGTaGCTGATGGCGGCTACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSTNQAVPRNIRAAEVQQIDLRS*LMAATW Trigger: CCAGGTAGCCGCCATCAGCAACGACCTCAAGTCTAT...CTGTTGTACTTCTGCGGCTCTGATGTTCCTAGGAACTGCTTGGTTTGTTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | ACATGTGTGAAAAGCTTGCAGACAAGGAACTTCCTATCTACAAAGGAATGCCAATGTGTGCGGATAGACTaGAGGTCGTTGCTGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TCVKSLQTRNFLSTKECQCVRID*RSLLMA Trigger: CGCCATCAGCAACGACCTCAAGTCTATCCGCACACA...TTGGCATTCCTTTGTAGATAGGAAGTTCCTTGTCTGCAAGCTTTTCACACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGCTCAGGATTCCAGGCAACATGTTTGCAGTGGCAGATAACCTCTGATAATTCATTCTCCAGTTTGTaGATTGTGTCCTGCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MSSGFQATCLQWQITSDNSFSSL*IVSCMA Trigger: CGCCATGCAGGACACAATCAACAAACTGGAGAATGA...ATTATCAGAGGTTATCTGCCACTGCAAACATGTTGCCTGGAATCCTGAGCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTGCGTAAGGAGGAAATTCATAGCACAACATTGAAAGTCCAACCTAAGTCATCCTCTTCAGATTCTTaGGTGTCTTCCTCCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: TLRKEEIHSTTLKVQPKSSSSDS*VSSSSP Trigger: GGGTGAGGAGGAAGACACCAAAGAATCTGAAGAGGA...TGACTTAGGTTGGACTTTCAATGTTGTGCTATGAATTTCCTCCTTACGCAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCGTCCACTTACCTATGGTTTATGTTGGTGCCTTATTTAAGGTACTTTAATTCTTCAGACTCATCCTaGGCAGCTTCTTCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSSTYLWFMLVPYLRYFNSSDSS*AASSSS Trigger: TGAGGAGGAAGAAGCTGCCAAGGATGAGTCTGAAGA...ATTAAAGTACCTTAAATAAGGCACCAACATAAACCATAGGTAAGTGGACGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGCTCAGGATTCCAGGCAACATGTTTGCAGTGGCAGATAACCTCTGATAATCTTCTTCTTCTTCTTTaGTGTCTTCAGACTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: MSSGFQATCLQWQITSDNLLLLL*CLQTHP Trigger: AGGATGAGTCTGAAGACACAAAAGAAGAAGAAGAAG...ATTATCAGAGGTTATCTGCCACTGCAAACATGTTGCCTGGAATCCTGAGCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 72 bp | GCTCGGCGCGGGCGAGCGCGGCCTCATCCGCACCTTTaGGCGCTTCCATCAGCCGGCCCTCGGCGTCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARRGRARPHPHL*ALPSAGPRRPR Trigger: GCGAGGACGCCGAGGGCCGGCTGATGGAAGCGCGCAAAGGTGCGGATGAGGCCGCGCTCGCCCGCGCCGAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CAA 90 bp | CGCTTCTCCAGCTCGGCGCGGGCGAGCGCGGCCTCATCCGCACCTTaGCGCGCTTCCATCAGCCGGCCCTCGGCGTCCTCGCGGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFSSSARASAASSAP*RASISRPSASSRLS Trigger: GCTGAGCCGCGAGGACGCCGAGGGCCGGCTGATGGAAGCGCGCAAAGGTGCGGATGAGGCCGCGCTCGCCCGCGCCGAGCTGGAGAAGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 72 bp | CCGGCGCGGAGTAGCTGGAGTACGCGGAGCGCGCCGTaGTGTAGCCGCTGCGCACGCTGGAGATGTGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: PARSSWSTRSAP*CSRCARWRCAP Trigger: GGGTGCACATCTCCAGCGTGCGCAGCGGCTACAGCACGGCGCGCTCCGCGTACTCCAGCTACTCCGCGCCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CCA 72 bp | ACGCGGAGCGCGCCGTGCTGTAGCCGCTGCGCACGCTaGAGATGTGCACCCGGGGCGTCTCCACATAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRSAPCCSRCAR*RCAPGASPHSA Trigger: GGCGCTATGTGGAGACGCCCCGGGTGCACATCTCCAGCGTGCGCAGCGGCTACAGCACGGCGCGCTCCGCGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 72 bp | GGCTGGGCATCAAAGAGCCAGAGCTGGACGAGTAGCTaGGGCGCACGGACAGCGAGGAGGAGACCGGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GWASKSQSWTSS*GARTARRRPAR Trigger: CCGCGCCGGTCTCCTCCTCGCTGTCCGTGCGCCGCAGCTACTCGTCCAGCTCTGGCTCTTTGATGCCCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CAA 72 bp | GCCTTGAGCAGGCGGCGGCTTTCCGACACCTCGTCCTaGGCAGCGCGCACAGCGTCGGTGTTCTTGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ALSRRRLSDTSS*AARTASVFLAA Trigger: CGCCGCCAAGAACACCGACGCTGTGCGCGCTGCCAAGGACGAGGTGTCGGAAAGCCGCCGCCTGCTCAAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CAA 72 bp | ACCTCGTCCTTGGCAGCGCGCACAGCGTCGGTGTTCTaGGCGGCGCTCTCGGTTAGCACGGTGAAGCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSSLAARTASVF*AALSVSTVKRL Trigger: GAGCCGCTTCACCGTGCTAACCGAGAGCGCCGCCAAGAACACCGACGCTGTGCGCGCTGCCAAGGACGAGGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CAA 90 bp | AGGGTCTTAGCCTTGAGCAGGCGGCGGCTTTCCGACACCTCGTCCTaGGCAGCGCGCACAGCGTCGGTGTTCTTGGCGGCGCTCTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RVLALSRRRLSDTSS*AARTASVFLAALSV Trigger: AACCGAGAGCGCCGCCAAGAACACCGACGCTGTGCGCGCTGCCAAGGACGAGGTGTCGGAAAGCCGCCGCCTGCTCAAGGCTAAGACCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 72 bp | GGCTCAGCACTTCTTCCTCATAGCGAGCCTGCAGGTTaGGCAGAGTCTCCTCCAGCCCCTCGCGCTCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSALLPHSEPAG*AESPPAPRARP Trigger: AGGGCGAGCGCGAGGGGCTGGAGGAGACTCTGCGCAACCTGCAGGCTCGCTATGAGGAAGAAGTGCTGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS CAA 90 bp | GCTTCGTTCATACCCCGGCAGGCTTCGATCTCCAGGGTCTTAGCCTaGAGCAGGCGGCGGCTTTCCGACACCTCGTCCTTGGCAGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASFIPRQASISRVLA*SRRRLSDTSSLAAR Trigger: GCGCGCTGCCAAGGACGAGGTGTCGGAAAGCCGCCGCCTGCTCAAGGCTAAGACCCTGGAGATCGAAGCCTGCCGGGGTATGAACGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
||
| CDS GCA 72 bp | TCTTCAGGAAAGCTATCTCGTCCATCAGGCTGTCGATaGGCTTCTCCAGCTCGGCGCGGGCGAGCGCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSGKLSRPSGCR*ASPARRGRARP Trigger: AGGCCGCGCTCGCCCGCGCCGAGCTGGAGAAGCGCATCGACAGCCTGATGGACGAGATAGCTTTCCTGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CCA 72 bp | CGAGATTCTCCAGGCTGGGCATCAAAGAGCCAGAGCTaGACGAGTAGCTGCGGCGCACGGACAGCGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RDSPGWASKSQS*TSSCGARTARR Trigger: CCTCCTCGCTGTCCGTGCGCCGCAGCTACTCGTCCAGCTCTGGCTCTTTGATGCCCAGCCTGGAGAATCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 90 bp | CTTTCCGACACCTCGTCCTTGGCAGCGCGCACAGCGTCGGTGTTCTaGGCGGCGCTCTCGGTTAGCACGGTGAAGCGGCTCTTGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: LSDTSSLAARTASVF*AALSVSTVKRLLNH Trigger: GTGGTTCAAGAGCCGCTTCACCGTGCTAACCGAGAGCGCCGCCAAGAACACCGACGCTGTGCGCGCTGCCAAGGACGAGGTGTCGGAAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 72 bp | ATACCCCGGCAGGCTTCGATCTCCAGGGTCTTAGCCTaGAGCAGGCGGCGGCTTTCCGACACCTCGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: IPRQASISRVLA*SRRRLSDTSSL Trigger: CAAGGACGAGGTGTCGGAAAGCCGCCGCCTGCTCAAGGCTAAGACCCTGGAGATCGAAGCCTGCCGGGGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CCA 72 bp | TGGCGGCTACCTGGCTCAGATCGAGATTCTCCAGGCTaGGCATCAAAGAGCCAGAGCTGGACGAGTAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: WRLPGSDRDSPG*ASKSQSWTSSC Trigger: GCAGCTACTCGTCCAGCTCTGGCTCTTTGATGCCCAGCCTGGAGAATCTCGATCTGAGCCAGGTAGCCGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 90 bp | TCCTGCAGCTGTGCCTTCTCTTGTGTGCGGATAGACTTGAGGTCGTaGCTGATGGCGGCTACCTGGCTCAGATCGAGATTCTCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SCSCAFSCVRIDLRS*LMAATWLRSRFSRL Trigger: CAGCCTGGAGAATCTCGATCTGAGCCAGGTAGCCGCCATCAGCAACGACCTCAAGTCTATCCGCACACAAGAGAAGGCACAGCTGCAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS GCA 72 bp | CGCTCGATGAAGCTGGCGAAGCGATCGTTGAGGTCCTaGAGCTGTGCCTTCTCTTGTGTGCGGATAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: RSMKLAKRSLRS*SCAFSCVRIDL Trigger: CAAGTCTATCCGCACACAAGAGAAGGCACAGCTGCAGGACCTCAACGATCGCTTCGCCAGCTTCATCGAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 72 bp | TCCTGCAGCTGTGCCTTCTCTTGTGTGCGGATAGACTaGAGGTCGTTGCTGATGGCGGCTACCTGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SCSCAFSCVRID*RSLLMAATWLR Trigger: TCTGAGCCAGGTAGCCGCCATCAGCAACGACCTCAAGTCTATCCGCACACAAGAGAAGGCACAGCTGCAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 90 bp | TCGTTGAGGTCCTGCAGCTGTGCCTTCTCTTGTGTGCGGATAGACTaGAGGTCGTTGCTGATGGCGGCTACCTGGCTCAGATCGAGATTC | + |
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Preference number: 6 (lower is better) Translates to: SLRSCSCAFSCVRID*RSLLMAATWLRSRF Trigger: GAATCTCGATCTGAGCCAGGTAGCCGCCATCAGCAACGACCTCAAGTCTATCCGCACACAAGAGAAGGCACAGCTGCAGGACCTCAACGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS GCA 72 bp | GCGCTAATGTCTGCATTCTGCTTGTCCTCTAGCTCCTaGAGCTGCTTCTCCAGAGCTTCGTTCATACCCCGG | + |
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Preference number: 6 (lower is better) Translates to: ALMSAFCLSSSS*SCFSRASFIPR Trigger: CCGGGGTATGAACGAAGCTCTGGAGAAGCAGCTGCAGGAGCTAGAGGACAAGCAGAATGCAGACATTAGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS GCA 72 bp | AGGCTGGGAAAGAGCGAGCAGACATCAAGTAGGAGCTaGTCTGCAAGCCACTGTAAGCAGAACGGCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RLGKSEQTSSRS*SASHCKQNGRR Trigger: TCTTCGGCCGTTCTGCTTACAGTGGCTTGCAGAGCAGCTCCTACTTGATGTCTGCTCGCTCTTTCCCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CCA 72 bp | CGGATAGACTTGAGGTCGTTGCTGATGGCGGCTACCTaGCTCAGATCGAGATTCTCCAGGCTGGGCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: RIDLRSLLMAAT*LRSRFSRLGIK Trigger: TTTGATGCCCAGCCTGGAGAATCTCGATCTGAGCCAGGTAGCCGCCATCAGCAACGACCTCAAGTCTATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CCA 72 bp | TCTCCTCGACCTCTGTCTGCTCTTCCTGGACGTGGCTaGTATAGTAGGCTGGGAAAGAGCGAGCAGACATCA | + |
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Preference number: 6 (lower is better) Translates to: SPRPLSALPGRG*YSRLGKSEQTS Trigger: TGATGTCTGCTCGCTCTTTCCCAGCCTACTATACCAGCCACGTCCAGGAAGAGCAGACAGAGGTCGAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 72 bp | GAAGCGATCGTTGAGGTCCTGCAGCTGTGCCTTCTCTaGTGTGCGGATAGACTTGAGGTCGTTGCTGATGGC | + |
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Preference number: 6 (lower is better) Translates to: EAIVEVLQLCLL*CADRLEVVADG Trigger: GCCATCAGCAACGACCTCAAGTCTATCCGCACACAAGAGAAGGCACAGCTGCAGGACCTCAACGATCGCTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 72 bp | TGTGCCTTCTCTTGTGTGCGGATAGACTTGAGGTCGTaGCTGATGGCGGCTACCTGGCTCAGATCGAGATTC | + |
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Preference number: 6 (lower is better) Translates to: CAFSCVRIDLRS*LMAATWLRSRF Trigger: GAATCTCGATCTGAGCCAGGTAGCCGCCATCAGCAACGACCTCAAGTCTATCCGCACACAAGAGAAGGCACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 90 bp | TACCTGGCCATCTCGCTCTTCGTGCTTCTCAGCTCATTCTCCAGTTaGTTGATTGTGTCCTGCATGGCGCTAATGTCTGCATTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: YLAISLFVLLSSFSS*LIVSCMALMSAFCL Trigger: CAAGCAGAATGCAGACATTAGCGCCATGCAGGACACAATCAACAAACTGGAGAATGAGCTGAGAAGCACGAAGAGCGAGATGGCCAGGTA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 72 bp | CCTTCTTCTTCTTCTTTTGTGTCTTCAGACTCATCCTaGGCAGCTTCTTCCTCCTCAGCGCCTTCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PSSSSFVSSDSS*AASSSSAPSSS Trigger: GGAAGAGGAAGGCGCTGAGGAGGAAGAAGCTGCCAAGGATGAGTCTGAAGACACAAAAGAAGAAGAAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS CAA 72 bp | ATCTCGCTCTTCGTGCTTCTCAGCTCATTCTCCAGTTaGTTGATTGTGTCCTGCATGGCGCTAATGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ISLFVLLSSFSS*LIVSCMALMSA Trigger: TGCAGACATTAGCGCCATGCAGGACACAATCAACAAACTGGAGAATGAGCTGAGAAGCACGAAGAGCGAGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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| CDS GCA 72 bp | CTTCTCAGCTCATTCTCCAGTTTGTTGATTGTGTCCTaGATGGCGCTAATGTCTGCATTCTGCTTGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LLSSFSSLLIVS*MALMSAFCLSS Trigger: AGAGGACAAGCAGAATGCAGACATTAGCGCCATGCAGGACACAATCAACAAACTGGAGAATGAGCTGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022639.8 |
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