Pregenerated sensors for NEDD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019988Ensembl transcript IDs: ENSMUST00000020163.7, ENSMUST00000216086.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACAGTTGAGATCTTTGGGCAAGAGGCGACAAGAATATAAACGGTaGGTAGCCCCTAGTCCAGCCCTATCAAAGTGTAGGTTCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: TQLRSLGKRRQEYKR*VAPSPALSKCRFQQ Trigger: CTGCTGGAACCTACACTTTGATAGGGCTGGACTAGGGGCTACTCACCGTTTATATTCTTGTCGCCTCTTGCCCAAAGATCTCAACTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| 3UTR CCA 90 bp | TCTAAGCTACATTTTAGTAAACATCTTGATCCTGGAAAGCAAAAGTaGGGAACAGATGTACATATAAAGTACACAGTTGAGATCTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: SKLHFSKHLDPGKQK*GTDVHIKYTVEIFG Trigger: CCCAAAGATCTCAACTGTGTACTTTATATGTACATCTGTTCCCCACTTTTGCTTTCCAGGATCAAGATGTTTACTAAAATGTAGCTTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGAAAAGGCCACAGAAACTTGACACACAAACAGACTTTCTGAGTCACTTGGTTCCAGCAGGCAGATaGACACGGCCAGCTCCGCCA | + |
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Preference number: 2 (lower is better) Translates to: AKKRPQKLDTQTDFLSHLVPAGR*TRPAPP Trigger: TGGCGGAGCTGGCCGTGTTCATCTGCCTGCTGGAAC...CAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGAAAAGGCCACAGAAACTTGACACACAAACAGACTTTCTGAGTCACTTGGCTAAGGATAGAAAGTaGTGTTCACAGCACACTGTA | + |
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Preference number: 2 (lower is better) Translates to: AKKRPQKLDTQTDFLSHLAKDRK*CSQHTV Trigger: TACAGTGTGCTGTGAACAGCACTTTCTATCCTTAGC...CAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTCCTGGAAAGCAAAAGTaGGGAACAGATGTACATATA | + |
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Preference number: 2 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLPGKQK*GTDVHI Trigger: TATATGTACATCTGTTCCCCACTTTTGCTTTCCAGG...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| 3UTR TCA 72 bp | AGATCTTTGGGCAAGAGGCGACAAGAATATAAACGGTaGGTAGCCCCTAGTCCAGCCCTATCAAAGTGTAGG | + |
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Preference number: 3 (lower is better) Translates to: RSLGKRRQEYKR*VAPSPALSKCR Trigger: CCTACACTTTGATAGGGCTGGACTAGGGGCTACTCACCGTTTATATTCTTGTCGCCTCTTGCCCAAAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| 3UTR TCA 72 bp | AAAGGCCACAGAAACTTGACACACAAACAGACTTTCTaGGTCACTTGGAAAAGTCTTACTCCTGTTCCACTT | + |
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Preference number: 3 (lower is better) Translates to: KGHRNLTHKQTF*VTWKSLTPVPL Trigger: AAGTGGAACAGGAGTAAGACTTTTCCAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| 3UTR CCA 72 bp | CATTTTAGTAAACATCTTGATCCTGGAAAGCAAAAGTaGGGAACAGATGTACATATAAAGTACACAGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: HFSKHLDPGKQK*GTDVHIKYTVE Trigger: CTCAACTGTGTACTTTATATGTACATCTGTTCCCCACTTTTGCTTTCCAGGATCAAGATGTTTACTAAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGAAAAGGCCACAGAAACTTGACACACAAACAGACTTTCTGAGTCACTTGGCTTCGAGCCAAACCTaGTTCGTCCTGAGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: AKKRPQKLDTQTDFLSHLASSQT*FVLSSP Trigger: GGGGCTGCTCAGGACGAAGCAGGTTTGGCTCGAAGC...CAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGAAAAGGCCACAGAAACTTGACACACAAACAGACTTTCTGAGTCACTTGTTAAGAGGGCTGGAGTaGAGCACCAGACTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: AKKRPQKLDTQTDFLSHLLRGLE*STRLLE Trigger: CTCCAGCAGTCTGGTGCTGCACTCCAGCCCTCTTAA...CAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | GCCAAGAAAAGGCCACAGAAACTTGACACACAAACAGACTTTCTGAGTCACTTGCCATGCGGTGACGTGTaGGGGTTGAATTTATCCACC | + |
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Preference number: 4 (lower is better) Translates to: AKKRPQKLDTQTDFLSHLPCGDV*GLNLST Trigger: GGTGGATAAATTCAACCCTCACACGTCACCGCATGG...CAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTAGAGAAGCAGATGCCTaGAGCTGGGGCTTTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLREADA*SWGFVC Trigger: ACACACAAAGCCCCAGCTTCAGGCATCTGCTTCTCT...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTCAGGAGAGAAGCAGATaGCTGAAGCTGGGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLQERSR*LKLGLC Trigger: ACAAAGCCCCAGCTTCAGGCATCTGCTTCTCTCCTG...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTACAATTCCAGAATTCTaGGCAGCCCCACTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLTIPEF*AAPLLL Trigger: CAGCAGCAGTGGGGCTGCCCAGAATTCTGGAATTGT...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATTGGCCACTCCAGCAGTaGCGGAGGATGCTGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHWPLQQ*RRMLPL Trigger: CAAAGGCAGCATCCTCCGTCACTGCTGGAGTGGCCA...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACGGGCAGCCCCACTGCTaGTGCTCACAGGAACACTCC | + |
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Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNGQPHC*CSQEHS Trigger: GGAGTGTTCCTGTGAGCAGCAGCAGTGGGGCTGCCC...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACTCTGGGCAGCCCCACTaGTGCTGCTCACAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNSGQPH*CCSQEH Trigger: GTGTTCCTGTGAGCAGCAGCAGTGGGGCTGCCCAGA...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCAGCCCCTGATCCTTTaGCCAGAGCTGTTGTCACGG | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHQPLIL*PELLSR Trigger: CCGTGACAACAGCTCTGGGCAAAGGATCAGGGGCTG...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTCGCAAGCTCCAAAAGTaGAACGGGCTTACATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLRKLQK*NGLTFA Trigger: TGCAAATGTAAGCCCGTTCCACTTTTGGAGCTTGCG...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATGCAGCACCAGACTGCTaGAGGCACCTGCATTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHAAPDC*RHLHSS Trigger: GGAAGAATGCAGGTGCCTCCAGCAGTCTGGTGCTGC...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATAAACCTGCTTCGTCCTaGGCAGCCCCTGATCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHKPASS*AAPDPL Trigger: CAAAGGATCAGGGGCTGCTCAGGACGAAGCAGGTTT...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGAAAAGGCCACAGAAACTTGACACACAAACAGACTTTCTGAGTCACTTGAATGAGTACTTGATGTaGCGGATAGGCTGCTTACTC | + |
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Preference number: 4 (lower is better) Translates to: AKKRPQKLDTQTDFLSHLNEYLM*RIGCLL Trigger: GAGTAAGCAGCCTATCCGGCACATCAAGTACTCATT...CAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACCAGCCCCACTGCTGCTaGTCACAGGAACACTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNQPHCC*SQEHSV Trigger: AACGGAGTGTTCCTGTGAGCAGCAGCAGTGGGGCTG...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATGGAGAACTGTGGCAATaGAAGGGCTGGGTGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHGELWQ*KGWVLL Trigger: GAGAAGCACCCAGCCCTTCCATTGCCACAGTTCTCC...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACGCTGTGGGAGAACTGTaGCAATGGAAGGGCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNAVGEL*QWKGWV Trigger: CACCCAGCCCTTCCATTGCCACAGTTCTCCCACAGC...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTTCAGCTGACGGCTCATaGCTTTCATTCTCTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLSADGS*LSFSSF Trigger: GAAAGAAGAGAATGAAAGCCATGAGCCGTCAGCTGA...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATGGCTGGGTGCTTCTCTaGCAATTCCAGAATTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHGWVLL*QFQNSG Trigger: CCCAGAATTCTGGAATTGTCAGAGAAGCACCCAGCC...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTTCTTGTATCATGTTCTaGATGAAGCGGATCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLSCIMF*MKRIWT Trigger: AGTCCAGATCCGCTTCATTCAGAACATGATACAAGA...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTTGGCCTTATTTGAGCTaGCTTTGCTTAAACTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLWPYLS*LCLNLP Trigger: AGGCAAGTTTAAGCAAAGGCAGCTCAAATAAGGCCA...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATTGTTGTCACGGGCTGTaGGAGAACTGTGGCAATGGA | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHCCHGL*ENCGNG Trigger: TCCATTGCCACAGTTCTCCCACAGCCCGTGACAACA...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | TTGGACTTTAAATCCCAAATATTAACAGTGTTATTTAGGCCTCCACTTGCCAAACCATGCGGTGACGTGTaGGGGTTGAATTTATCCACC | + |
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Preference number: 4 (lower is better) Translates to: LDFKSQILTVLFRPPLAKPCGDV*GLNLST Trigger: GGTGGATAAATTCAACCCTCACACGTCACCGCATGG...TTTGGCAAGTGGAGGCCTAAATAACACTGTTAATATTTGGGATTTAAAGTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216086.2 |
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| CDS-3UTR TCA 90 bp | GCCAAGAAAAGGCCACAGAAACTTGACACACAAACAGACTTTCTGAGTCACTTGCTTACATTTGCAACTTaGCACCACTATTTTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: AKKRPQKLDTQTDFLSHLLTFAT*HHYFVT Trigger: GGTGACAAAATAGTGGTGTCAAGTTGCAAATGTAAG...CAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATACTGATTCCATGCGGTaGCGTGTGAGGGTTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHTDSMR*RVRVEF Trigger: AAATTCAACCCTCACACGTCACCGCATGGAATCAGT...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATAATGGAAGGGCTGGGTaGTTCTCTGACAATTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHNGRAG*FSDNSR Trigger: TCTGGAATTGTCAGAGAAGCACCCAGCCCTTCCATT...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGAAAAGGCCACAGAAACTTGACACACAAACAGACTTTCTGAGTCACTTGCTTTCCAGCAAAGAGTaGATTTCATTCAGCTGTATA | + |
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Preference number: 4 (lower is better) Translates to: AKKRPQKLDTQTDFLSHLLSSKE*ISFSCI Trigger: TATACAGCTGAATGAAATGCACTCTTTGCTGGAAAG...CAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATTGCACAGATGTCTTGTaGGCACTGATGGTTTTCACG | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHCTDVL*ALMVFT Trigger: CGTGAAAACCATCAGTGCCCACAAGACATCTGTGCA...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATGTGACGTGTGAGGGTTaGATTTATCCACCAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHVTCEG*IYPPMS Trigger: TGACATTGGTGGATAAATTCAACCCTCACACGTCAC...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACGTGTGGTATGAACTCTaGCTGTTCACATCCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNVWYEL*LFTSQR Trigger: TCTCTGGGATGTGAACAGTCAGAGTTCATACCACAC...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACCAAACAGCAGTTCATTaGCAGGAGAGAAGCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNQTAVH*QERSRC Trigger: GCATCTGCTTCTCTCCTGTCAATGAACTGCTGTTTG...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR GCA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTTTTTTCAAGATTTCTTaGTTGGTTAGACGATGGACA | + |
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Preference number: 4 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLFFKIS*LVRRWT Trigger: TGTCCATCGTCTAACCAAGCAAGAAATCTTGAAAAA...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATGTTTGTTCACTGCTGTaGCCTTATTTGAGCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHVCSLL*PYLSCL Trigger: AAGGCAGCTCAAATAAGGCCACAGCAGTGAACAAAC...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | TTGGACTTTAAATCCCAAATATTAACAGTGTTATTTAGGCCTCCACTTGCCAAAGTGACGTGTGAGGGTTaGATTTATCCACCAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: LDFKSQILTVLFRPPLAKVTCEG*IYPPMS Trigger: TGACATTGGTGGATAAATTCAACCCTCACACGTCAC...TTTGGCAAGTGGAGGCCTAAATAACACTGTTAATATTTGGGATTTAAAGTCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216086.2 |
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| CDS-3UTR CCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTTCGTCAGAGATGTaGAGTACTGAAATGCTATAC | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHPSSEM*STEMLY Trigger: GTATAGCATTTCAGTACTCCACATCTCTGACGAAGG...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR CCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATTTCACAATGTCTCTATaGCAAGCTTCCCTGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHFTMSL*QASLKS Trigger: TGACTTCAGGGAAGCTTGCCATAGAGACATTGTGAA...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACAGACTTCCTAAACAATaGGTACTTGATGTGCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNRLPKQ*VLDVPD Trigger: ATCCGGCACATCAAGTACTCATTGTTTAGGAAGTCT...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS-3UTR TCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACAGAGATGTGGAGTACTaGAATGCTATACACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNRDVEY*NAIHCT Trigger: TGTGCAGTGTATAGCATTTCAGTACTCCACATCTCT...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR GCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATTGTGGAGTACTGAAATaGTATACACTGCACAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHCGVLK*YTLHRC Trigger: ACATCTGTGCAGTGTATAGCATTTCAGTACTCCACA...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCTATTTTGTCACCACTaGAAGAAGCTGTCACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHLFCHH*KKLSLE Trigger: TTCTAGTGACAGCTTCTTCCAGTGGTGACAAAATAG...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR GCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACGAACGGGCTTACATTTaGAACTTGACACCACTATTT | + |
|
Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNERAYI*NLTPLF Trigger: AAATAGTGGTGTCAAGTTGCAAATGTAAGCCCGTTC...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR TCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACAAGTATCATAGAGGATaGTTCTTTTATCCAGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNKYHRG*FFYPGL Trigger: TAGGCCTGGATAAAAGAATCATCCTCTATGATACTT...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR GCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACGTCATTCCAATTGTATaGCACACAAGTTACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNVIPIV*HTSYFT Trigger: TGTGAAGTAACTTGTGTGGCATACAATTGGAATGAC...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATGGTTCATGTATCAACTaGGCTTCAATATCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQGHANNTDSVYYSCQKHGSCIN*ASISFS Trigger: AGAAAAAGATATTGAAGCCCAGTTGATACATGAACC...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CCA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACACCGATGAAGTCGTTTaGACTTTAAATCCCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: QTILIPCIIVARNILTHNTDEVV*TLNPKY Trigger: ATATTTGGGATTTAAAGTCCAAACGACTTCATCGGT...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS GCA 90 bp | TGCTTCGAGCCAAACCTGCTTCGTCCTGAGCAGCCCCTGATCCTTTaGCCAGAGCTGTTGTCACGGGCTGTGGGAGAACTGTGGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: CFEPNLLRPEQPLIL*PELLSRAVGELWQW Trigger: CCATTGCCACAGTTCTCCCACAGCCCGTGACAACAGCTCTGGGCAAAGGATCAGGGGCTGCTCAGGACGAAGCAGGTTTGGCTCGAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS CCA 90 bp | GTGGCAATGGAAGGGCTGGGTGCTTCTCTGACAATTCCAGAATTCTaGGCAGCCCCACTGCTGCTGCTCACAGGAACACTCCGTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VAMEGLGASLTIPEF*AAPLLLLTGTLRLF Trigger: GAACAAACGGAGTGTTCCTGTGAGCAGCAGCAGTGGGGCTGCCCAGAATTCTGGAATTGTCAGAGAAGCACCCAGCCCTTCCATTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS GCA 90 bp | TCTTCTTTCCCTGAAGATCCCATGAGGACATTAAGAGGGCTGGAGTaGAGCACCAGACTGCTGGAGGCACCTGCATTCTTCCTCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFPEDPMRTLRGLE*STRLLEAPAFFLRG Trigger: CCCTCTGAGGAAGAATGCAGGTGCCTCCAGCAGTCTGGTGCTGCACTCCAGCCCTCTTAATGTCCTCATGGGATCTTCAGGGAAAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 90 bp | ATCCAGTGTTTCTTGTATCATGTTCTGAATGAAGCGGATCTGGACTaGGGTAAGCGGCGCCCCTGGCCGACTGTTCCCAAGGGTATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: IQCFLYHVLNEADLD*GKRRPWPTVPKGID Trigger: GTCGATACCCTTGGGAACAGTCGGCCAGGGGCGCCGCTTACCTCAGTCCAGATCCGCTTCATTCAGAACATGATACAAGAAACACTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 90 bp | TGGCAAGCTTCCCTGAAGTCATCCAGTGTTTCTTGTATCATGTTCTaGATGAAGCGGATCTGGACTGAGGTAAGCGGCGCCCCTGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WQASLKSSSVSCIMF*MKRIWTEVSGAPGR Trigger: TCGGCCAGGGGCGCCGCTTACCTCAGTCCAGATCCGCTTCATTCAGAACATGATACAAGAAACACTGGATGACTTCAGGGAAGCTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS CCA 90 bp | CCCCACTGCTGCTGCTCACAGGAACACTCCGTTTGTTCACTGCTGTaGCCTTATTTGAGCTGCCTTTGCTTAAACTTGCCTTCGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PHCCCSQEHSVCSLL*PYLSCLCLNLPSSE Trigger: CTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCTCAAATAAGGCCACAGCAGTGAACAAACGGAGTGTTCCTGTGAGCAGCAGCAGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS GCA 90 bp | GAAACGCTGCCCAAGAGAGACTTCCTAAACAATGAGTACTTGATGTaGCGGATAGGCTGCTTACTCCCATGGCCAAAAGGTGTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ETLPKRDFLNNEYLM*RIGCLLPWPKGVLD Trigger: ATCCAGCACACCTTTTGGCCATGGGAGTAAGCAGCCTATCCGGCACATCAAGTACTCATTGTTTAGGAAGTCTCTCTTGGGCAGCGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 90 bp | TACTCCATTATCCGAAACGCTGCCCAAGAGAGACTTCCTAAACAATaGGTACTTGATGTGCCGGATAGGCTGCTTACTCCCATGGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: YSIIRNAAQERLPKQ*VLDVPDRLLTPMAK Trigger: TTTGGCCATGGGAGTAAGCAGCCTATCCGGCACATCAAGTACTCATTGTTTAGGAAGTCTCTCTTGGGCAGCGTTTCGGATAATGGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 90 bp | GAAGCTGGGGCTTTGTGTGTACTGTCAAAGGTGTGGTATGAACTCTaGCTGTTCACATCCCAGAGAGTCACTACTCCATTATCCGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: EAGALCVLSKVWYEL*LFTSQRVTTPLSET Trigger: CGTTTCGGATAATGGAGTAGTGACTCTCTGGGATGTGAACAGTCAGAGTTCATACCACACCTTTGACAGTACACACAAAGCCCCAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 90 bp | GAGCTGCCTTTGCTTAAACTTGCCTTCGTCAGAGATGTGGAGTACTaGAATGCTATACACTGCACAGATGTCTTGTGGGCACTGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ELPLLKLAFVRDVEY*NAIHCTDVLWALMV Trigger: AACCATCAGTGCCCACAAGACATCTGTGCAGTGTATAGCATTTCAGTACTCCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 90 bp | CTATTGCTGCTCCAACAGATTGAACTGATTCCATGCGGTGACGTGTaGGGGTTGAATTTATCCACCAATGTCAGGAACGAAGCATCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLQQIELIPCGDV*GLNLSTNVRNEASH Trigger: ATGGGATGCTTCGTTCCTGACATTGGTGGATAAATTCAACCCTCACACGTCACCGCATGGAATCAGTTCAATCTGTTGGAGCAGCAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216086.2 |
||
| CDS GCA 90 bp | TCACAGGAACACTCCGTTTGTTCACTGCTGTGGCCTTATTTGAGCTaGCTTTGCTTAAACTTGCCTTCGTCAGAGATGTGGAGTACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQEHSVCSLLWPYLS*LCLNLPSSEMWSTE Trigger: TTCAGTACTCCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCTCAAATAAGGCCACAGCAGTGAACAAACGGAGTGTTCCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS CCA 90 bp | TCCTGCTTCCCTAGGTATGCTCTTTTAGACTCAGCTGACGGCTCATaGCTTTCATTCTCTTCTTTCCCTGAAGATCCCATGAGGACATTA | + |
|
Preference number: 5 (lower is better) Translates to: SCFPRYALLDSADGS*LSFSSFPEDPMRTL Trigger: TAATGTCCTCATGGGATCTTCAGGGAAAGAAGAGAATGAAAGCCATGAGCCGTCAGCTGAGTCTAAAAGAGCATACCTAGGGAAGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CAA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATGCAGCCCCTGATCCTTaGCCCAGAGCTGTTGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: FQGHANNTDSVYYSCQKHAAPDP*PRAVVT Trigger: CGTGACAACAGCTCTGGGCAAAGGATCAGGGGCTGC...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 90 bp | TTATTGCTGCTCCAACAGATTGAACTGATTCCATGCGGTGACGTGTaGGGGTTGAATTTATCCACCAATGTCAGGAACGAAGCATCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLQQIELIPCGDV*GLNLSTNVRNEASH Trigger: ATGGGATGCTTCGTTCCTGACATTGGTGGATAAATTCAACCCTCACACGTCACCGCATGGAATCAGTTCAATCTGTTGGAGCAGCAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS GCA 90 bp | AAGAGAGACTTCCTAAACAATGAGTACTTGATGTGCCGGATAGGCTaGTTACTCCCATGGCCAAAAGGTGTGCTGGATGTATTAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KRDFLNNEYLMCRIG*LLPWPKGVLDVLVV Trigger: AACCACTAATACATCCAGCACACCTTTTGGCCATGGGAGTAAGCAGCCTATCCGGCACATCAAGTACTCATTGTTTAGGAAGTCTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS GCA 90 bp | GAACACTCCGTTTGTTCACTGCTGTGGCCTTATTTGAGCTGCCTTTaGTTAAACTTGCCTTCGTCAGAGATGTGGAGTACTGAAATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EHSVCSLLWPYLSCL*LNLPSSEMWSTEML Trigger: TAGCATTTCAGTACTCCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCTCAAATAAGGCCACAGCAGTGAACAAACGGAGTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS GCA 90 bp | TTTAGAATTCCAGGTTCAGCACCAGAGGAGATCAACTTTGTAAACTaGTTCATGGCGTCCTTAGGTTCCTGCTTCCCTAGGTATGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FRIPGSAPEEINFVN*FMASLGSCFPRYAL Trigger: AAGAGCATACCTAGGGAAGCAGGAACCTAAGGACGCCATGAAGCAGTTTACAAAGTTGATCTCCTCTGGTGCTGAACCTGGAATTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS CCA 90 bp | CTAAACAATGAGTACTTGATGTGCCGGATAGGCTGCTTACTCCCATaGCCAAAAGGTGTGCTGGATGTATTAGTGGTTACACTGTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNNEYLMCRIGCLLP*PKGVLDVLVVTLCK Trigger: CTTACACAGTGTAACCACTAATACATCCAGCACACCTTTTGGCCATGGGAGTAAGCAGCCTATCCGGCACATCAAGTACTCATTGTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS CCA 90 bp | CCTTATTTGAGCTGCCTTTGCTTAAACTTGCCTTCGTCAGAGATGTaGAGTACTGAAATGCTATACACTGCACAGATGTCTTGTGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PYLSCLCLNLPSSEM*STEMLYTAQMSCGH Trigger: GTGCCCACAAGACATCTGTGCAGTGTATAGCATTTCAGTACTCCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCTCAAATAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CAA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTTGCCTTTGCTTAAACTaGCCTTCGTCAGAGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLCLCLN*PSSEMW Trigger: CCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCA...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 90 bp | GCACTGATGGTTTTCACGGGAGATTTCAGCATCCTTAAGTCATACTaGTATATTTTCCCACGGGAAGATCCAATAGCCAAAGTGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALMVFTGDFSILKSY*YIFPREDPIAKVAP Trigger: TGGAGCCACTTTGGCTATTGGATCTTCCCGTGGGAAAATATATCAGTATGACTTAAGGATGCTGAAATCTCCCGTGAAAACCATCAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CAA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTGGAACGGGCTTACATTaGCAACTTGACACCACTATT | + |
|
Preference number: 5 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLGTGLH*QLDTTI Trigger: AATAGTGGTGTCAAGTTGCAAATGTAAGCCCGTTCC...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CAA 90 bp | CTTGTTACAAGTCATAATGCGGCCATAGCTGCCAAGAAAAGGCCACAGAAACTTGATTCATCACCTCCTTaGCTGACTACAGCATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LVTSHNAAIAAKKRPQKLDSSPP*LTTASS Trigger: AGATGATGCTGTAGTCAGCAAAGGAGGTGATGAATC...AAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCGCATTATGACTTGTAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 90 bp | TGGAGTACTGAAATGCTATACACTGCACAGATGTCTTGTGGGCACTaGTGGTTTTCACGGGAGATTTCAGCATCCTTAAGTCATACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: WSTEMLYTAQMSCGH*WFSREISASLSHTD Trigger: ATCAGTATGACTTAAGGATGCTGAAATCTCCCGTGAAAACCATCAGTGCCCACAAGACATCTGTGCAGTGTATAGCATTTCAGTACTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CAA 90 bp | GCCAAGAAAAGGCCACAGAAACTTGACACACAAACAGACTTTCTGAGTCACTTGTTATTTGAGCTGCCTTaGCTTAAACTTGCCTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: AKKRPQKLDTQTDFLSHLLFELP*LKLAFV Trigger: GACGAAGGCAAGTTTAAGCAAAGGCAGCTCAAATAA...CAAGTGACTCAGAAAGTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACTGGGCCCGCAGCCTTTaGTTTTCTTCTCGCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QTILIPCIIVARNILTHNWARSL*FSSRSL Trigger: AAGGCTGCGAGAAGAAAACAAAAGGCTGCGGGCCCA...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS CCA 90 bp | GAACGGGCTTACATTTGCAACTTGACACCACTATTTTGTCACCACTaGAAGAAGCTGTCACTAGAAAGTTATTATTGCTGCTCCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ERAYICNLTPLFCHH*KKLSLESYYCCSNR Trigger: TCTGTTGGAGCAGCAATAATAACTTTCTAGTGACAGCTTCTTCCAGTGGTGACAAAATAGTGGTGTCAAGTTGCAAATGTAAGCCCGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS GCA 90 bp | ACCACTGAGAGACCCAGAAGCAATGTAACAGTCATTCCAATTGTATaGCACACAAGTTACTTCACATTTATGATCCTTAAGAGACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TTERPRSNVTVIPIV*HTSYFTFMILKRPM Trigger: CATCGGTCTCTTAAGGATCATAAATGTGAAGTAACTTGTGTGGCATACAATTGGAATGACTGTTACATTGCTTCTGGGTCTCTCAGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CAA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCTTGACACCACTATTTaGTCACCACTGGAAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FQGHANNTDSVYYSCQKHLDTTI*SPLEEA Trigger: AGCTTCTTCCAGTGGTGACAAAATAGTGGTGTCAAG...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CAA 90 bp | CAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATCCTAACTCATAACAAAATATCTGTACTTTaGCTTCGAGCCAAACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTILIPCIIVARNILTHNKISVL*LRAKPA Trigger: AGCAGGTTTGGCTCGAAGCAAAAGTACAGATATTTT...GTTATGAGTTAGGATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS-3UTR CAA 90 bp | TTTCAAGGCCATGCAAACAATACTGATTCCGTGTATTATAGTTGCCAGAAACATGTCATCCAGTGTTTCTaGTATCATGTTCTGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: FQGHANNTDSVYYSCQKHVIQCF*YHVLNE Trigger: TTCATTCAGAACATGATACAAGAAACACTGGATGAC...ATGTTTCTGGCAACTATAATACACGGAATCAGTATTGTTTGCATGGCCTTGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS GCA 72 bp | CCTGAAGATCCCATGAGGACATTAAGAGGGCTGGAGTaGAGCACCAGACTGCTGGAGGCACCTGCATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PEDPMRTLRGLE*STRLLEAPAFF Trigger: GAAGAATGCAGGTGCCTCCAGCAGTCTGGTGCTGCACTCCAGCCCTCTTAATGTCCTCATGGGATCTTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS CAA 72 bp | GCAGCCCCACTGCTGCTGCTCACAGGAACACTCCGTTaGTTCACTGCTGTGGCCTTATTTGAGCTGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AAPLLLLTGTLR*FTAVALFELPL Trigger: CAAAGGCAGCTCAAATAAGGCCACAGCAGTGAACAAACGGAGTGTTCCTGTGAGCAGCAGCAGTGGGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 72 bp | TCTGTACTTTTGCTTCGAGCCAAACCTGCTTCGTCCTaGGCAGCCCCTGATCCTTTGCCCAGAGCTGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVLLLRAKPASS*AAPDPLPRAVV Trigger: GACAACAGCTCTGGGCAAAGGATCAGGGGCTGCTCAGGACGAAGCAGGTTTGGCTCGAAGCAAAAGTACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 72 bp | TTCTTGTATCATGTTCTGAATGAAGCGGATCTGGACTaGGGTAAGCGGCGCCCCTGGCCGACTGTTCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: FLYHVLNEADLD*GKRRPWPTVPK Trigger: CTTGGGAACAGTCGGCCAGGGGCGCCGCTTACCTCAGTCCAGATCCGCTTCATTCAGAACATGATACAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS CAA 90 bp | GAATTCTGGGCAGCCCCACTGCTGCTGCTCACAGGAACACTCCGTTaGTTCACTGCTGTGGCCTTATTTGAGCTGCCTTTGCTTAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: EFWAAPLLLLTGTLR*FTAVALFELPLLKL Trigger: AAGTTTAAGCAAAGGCAGCTCAAATAAGGCCACAGCAGTGAACAAACGGAGTGTTCCTGTGAGCAGCAGCAGTGGGGCTGCCCAGAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS CAA 72 bp | ACGCTGCCCAAGAGAGACTTCCTAAACAATGAGTACTaGATGTGCCGGATAGGCTGCTTACTCCCATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TLPKRDFLNNEY*MCRIGCLLPWP Trigger: TGGCCATGGGAGTAAGCAGCCTATCCGGCACATCAAGTACTCATTGTTTAGGAAGTCTCTCTTGGGCAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
||
| CDS TCA 72 bp | ATCCGAAACGCTGCCCAAGAGAGACTTCCTAAACAATaGGTACTTGATGTGCCGGATAGGCTGCTTACTCCC | + |
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Preference number: 6 (lower is better) Translates to: IRNAAQERLPKQ*VLDVPDRLLTP Trigger: GGGAGTAAGCAGCCTATCCGGCACATCAAGTACTCATTGTTTAGGAAGTCTCTCTTGGGCAGCGTTTCGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS TCA 72 bp | TCCCTGAAGTCATCCAGTGTTTCTTGTATCATGTTCTaGATGAAGCGGATCTGGACTGAGGTAAGCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SLKSSSVSCIMF*MKRIWTEVSGA Trigger: GGCGCCGCTTACCTCAGTCCAGATCCGCTTCATTCAGAACATGATACAAGAAACACTGGATGACTTCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CAA 90 bp | TTATCCGAAACGCTGCCCAAGAGAGACTTCCTAAACAATGAGTACTaGATGTGCCGGATAGGCTGCTTACTCCCATGGCCAAAAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSETLPKRDFLNNEY*MCRIGCLLPWPKGV Trigger: CACACCTTTTGGCCATGGGAGTAAGCAGCCTATCCGGCACATCAAGTACTCATTGTTTAGGAAGTCTCTCTTGGGCAGCGTTTCGGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS TCA 72 bp | AGCTGGGGCTTTGTGTGTACTGTCAAAGGTGTGGTATaGACTCTGACTGTTCACATCCCAGAGAGTCACTAC | + |
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Preference number: 6 (lower is better) Translates to: SWGFVCTVKGVV*TLTVHIPESHY Trigger: GTAGTGACTCTCTGGGATGTGAACAGTCAGAGTTCATACCACACCTTTGACAGTACACACAAAGCCCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS GCA 72 bp | CCCAAGAGAGACTTCCTAAACAATGAGTACTTGATGTaGCGGATAGGCTGCTTACTCCCATGGCCAAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: PKRDFLNNEYLM*RIGCLLPWPKG Trigger: ACCTTTTGGCCATGGGAGTAAGCAGCCTATCCGGCACATCAAGTACTCATTGTTTAGGAAGTCTCTCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS GCA 72 bp | CACTCCGTTTGTTCACTGCTGTGGCCTTATTTGAGCTaGCTTTGCTTAAACTTGCCTTCGTCAGAGATGTGG | + |
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Preference number: 6 (lower is better) Translates to: HSVCSLLWPYLS*LCLNLPSSEMW Trigger: CCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCTCAAATAAGGCCACAGCAGTGAACAAACGGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CAA 72 bp | GAGGATGCTGCCTTTGGTACTGTAGTTGAGGAGCCGTaGACTGAGGGTTCATGTATCAACTGGGCTTCAATA | + |
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Preference number: 6 (lower is better) Translates to: EDAAFGTVVEEP*TEGSCINWASI Trigger: TATTGAAGCCCAGTTGATACATGAACCCTCAGTCAACGGCTCCTCAACTACAGTACCAAAGGCAGCATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CAA 90 bp | GCAGTGACGGAGGATGCTGCCTTTGGTACTGTAGTTGAGGAGCCGTaGACTGAGGGTTCATGTATCAACTGGGCTTCAATATCTTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: AVTEDAAFGTVVEEP*TEGSCINWASISFS Trigger: AGAAAAAGATATTGAAGCCCAGTTGATACATGAACCCTCAGTCAACGGCTCCTCAACTACAGTACCAAAGGCAGCATCCTCCGTCACTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS GCA 72 bp | CTTCCGCAAGCTCCAAAAGTGGAACGGGCTTACATTTaGAACTTGACACCACTATTTTGTCACCACTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LPQAPKVERAYI*NLTPLFCHHWK Trigger: CTTCCAGTGGTGACAAAATAGTGGTGTCAAGTTGCAAATGTAAGCCCGTTCCACTTTTGGAGCTTGCGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS GCA 72 bp | TTCCTAAACAATGAGTACTTGATGTGCCGGATAGGCTaGTTACTCCCATGGCCAAAAGGTGTGCTGGATGTA | + |
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Preference number: 6 (lower is better) Translates to: FLNNEYLMCRIG*LLPWPKGVLDV Trigger: TACATCCAGCACACCTTTTGGCCATGGGAGTAAGCAGCCTATCCGGCACATCAAGTACTCATTGTTTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CAA 72 bp | CCTTCCGCAAGCTCCAAAAGTGGAACGGGCTTACATTaGCAACTTGACACCACTATTTTGTCACCACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PSASSKSGTGLH*QLDTTILSPLE Trigger: TTCCAGTGGTGACAAAATAGTGGTGTCAAGTTGCAAATGTAAGCCCGTTCCACTTTTGGAGCTTGCGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CAA 72 bp | CGTTTGTTCACTGCTGTGGCCTTATTTGAGCTGCCTTaGCTTAAACTTGCCTTCGTCAGAGATGTGGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: RLFTAVALFELP*LKLAFVRDVEY Trigger: GTACTCCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCTCAAATAAGGCCACAGCAGTGAACAAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS TCA 72 bp | CTCCAACAGATTGAACTGATTCCATGCGGTGACGTGTaGGGGTTGAATTTATCCACCAATGTCAGGAACGAA | + |
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Preference number: 6 (lower is better) Translates to: LQQIELIPCGDV*GLNLSTNVRNE Trigger: TTCGTTCCTGACATTGGTGGATAAATTCAACCCTCACACGTCACCGCATGGAATCAGTTCAATCTGTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020163.7 ENSMUST00000216086.2 |
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| CDS GCA 72 bp | GTTTGTTCACTGCTGTGGCCTTATTTGAGCTGCCTTTaGTTAAACTTGCCTTCGTCAGAGATGTGGAGTACT | + |
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Preference number: 6 (lower is better) Translates to: VCSLLWPYLSCL*LNLPSSEMWST Trigger: AGTACTCCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCTCAAATAAGGCCACAGCAGTGAACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CAA 72 bp | CTGCTGTGGCCTTATTTGAGCTGCCTTTGCTTAAACTaGCCTTCGTCAGAGATGTGGAGTACTGAAATGCTA | + |
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Preference number: 6 (lower is better) Translates to: LLWPYLSCLCLN*PSSEMWSTEML Trigger: TAGCATTTCAGTACTCCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCTCAAATAAGGCCACAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS TCA 72 bp | AAGCTCCAAAAGTGGAACGGGCTTACATTTGCAACTTaGCACCACTATTTTGTCACCACTGGAAGAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KLQKWNGLTFAT*HHYFVTTGRSC Trigger: ACAGCTTCTTCCAGTGGTGACAAAATAGTGGTGTCAAGTTGCAAATGTAAGCCCGTTCCACTTTTGGAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS TCA 72 bp | GCTTTGTGTGTACTGTCAAAGGTGTGGTATGAACTCTaGCTGTTCACATCCCAGAGAGTCACTACTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: ALCVLSKVWYEL*LFTSQRVTTPL Trigger: TAATGGAGTAGTGACTCTCTGGGATGTGAACAGTCAGAGTTCATACCACACCTTTGACAGTACACACAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS TCA 72 bp | TTGCTTAAACTTGCCTTCGTCAGAGATGTGGAGTACTaGAATGCTATACACTGCACAGATGTCTTGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LLKLAFVRDVEY*NAIHCTDVLWA Trigger: TGCCCACAAGACATCTGTGCAGTGTATAGCATTTCAGTACTCCACATCTCTGACGAAGGCAAGTTTAAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CCA 72 bp | AGCTGCCTTTGCTTAAACTTGCCTTCGTCAGAGATGTaGAGTACTGAAATGCTATACACTGCACAGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: SCLCLNLPSSEM*STEMLYTAQMS Trigger: AGACATCTGTGCAGTGTATAGCATTTCAGTACTCCACATCTCTGACGAAGGCAAGTTTAAGCAAAGGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CAA 72 bp | GAGTTTAGCTGTGGTAGAAAGTCAAGGCCATCTCCTTaGCCTATAGATTCATCACCTCCTTTGCTGACTACA | + |
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Preference number: 6 (lower is better) Translates to: EFSCGRKSRPSP*PIDSSPPLLTT Trigger: TGTAGTCAGCAAAGGAGGTGATGAATCTATAGGCAAAGGAGATGGCCTTGACTTTCTACCACAGCTAAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CAA 90 bp | GTGCATTTCATTCAGCTGTATATGAAACTGTTTAATCATTTCCACTaGCAGATTCACAATGTCTCTATGGCAAGCTTCCCTGAAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: VHFIQLYMKLFNHFH*QIHNVSMASFPEVI Trigger: GATGACTTCAGGGAAGCTTGCCATAGAGACATTGTGAATCTGCAAGTGGAAATGATTAAACAGTTTCATATACAGCTGAATGAAATGCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS CCA 72 bp | TACATTTGCAACTTGACACCACTATTTTGTCACCACTaGAAGAAGCTGTCACTAGAAAGTTATTATTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: YICNLTPLFCHH*KKLSLESYYCC Trigger: GCAGCAATAATAACTTTCTAGTGACAGCTTCTTCCAGTGGTGACAAAATAGTGGTGTCAAGTTGCAAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS GCA 72 bp | AGACCCAGAAGCAATGTAACAGTCATTCCAATTGTATaGCACACAAGTTACTTCACATTTATGATCCTTAAG | + |
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Preference number: 6 (lower is better) Translates to: RPRSNVTVIPIV*HTSYFTFMILK Trigger: CTTAAGGATCATAAATGTGAAGTAACTTGTGTGGCATACAATTGGAATGACTGTTACATTGCTTCTGGGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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| CDS TCA 72 bp | TTTTCACTAGCTTCTTACTTGAAGTATCATAGAGGATaGTTCTTTTATCCAGGCCTATGGTTACAAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSLASYLKYHRG*FFYPGLWLQTA Trigger: TGCTGTTTGTAACCATAGGCCTGGATAAAAGAATCATCCTCTATGATACTTCAAGTAAGAAGCTAGTGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020163.7 |
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