Pregenerated sensors for NECTIN4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000006411

Ensembl transcript IDs: ENSMUST00000006578.10, ENSMUST00000094325.5, ENSMUST00000111286.9

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GCTTCTCACTTGCTCCCAAGGGGTGGGAACACAGCTCCCCCACTTTaGAGGTCAGATTCTAGCTCCAGCTGTGCCCGCACACCTGGATCT	+
Preference number: 1 (lower is better) Translates to: ASHLLPRGGNTAPPL*RSDSSSSCARTPGS Trigger: AGATCCAGGTGTGCGGGCACAGCTGGAGCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTTCCCACCCCTTGGGAGCAAGTGAGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR TCA 90 bp	AGGGCCTGTTCTCACCCTCACCCACAACACCCCTTTCTCTTCACCTaGACTTCCACCTTCCCCGCGACCTACCCTCTGCCCTCAACACAA	+
Preference number: 1 (lower is better) Translates to: RACSHPHPQHPFLFT*TSTFPATYPLPSTQ Trigger: TTGTGTTGAGGGCAGAGGGTAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGAGGGTGAGAACAGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR GCA 90 bp	CACACCTGGATCTGGCCACAGTCTCCACCTCTCGCTTCTAACCTCTaGATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTC	+
Preference number: 1 (lower is better) Translates to: HTWIWPQSPPLASNL*IANTALGSEENPCL Trigger: GAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAGAAGCGAGAGGTGGAGACTGTGGCCAGATCCAGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR CCA 90 bp	AGTCTCCACCTCTCGCTTCTAACCTCTGCATCGCTAATACTGCTCTaGGGTCTGAGGAAAATCCCTGCCTCTGCAGGCAGAGGTCACACA	+
Preference number: 1 (lower is better) Translates to: SLHLSLLTSASLILL*GLRKIPASAGRGHT Trigger: TGTGTGACCTCTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAGAAGCGAGAGGTGGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR TCA 90 bp	CACACACACACACACACACACACACACACACACACACACAGAGGATaGCCTACACACAATGGTGGGAGGCACTCAACCAGTGGAGCTCTC	+
Preference number: 1 (lower is better) Translates to: HTHTHTHTHTHTHRG*PTHNGGRHSTSGAL Trigger: GAGAGCTCCACTGGTTGAGTGCCTCCCACCATTGTGTGTAGGTCATCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR GCA 90 bp	TGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTaGAGGCAGAGGTCACACATAAGGCACTCTACTCACACACCACAC	+
Preference number: 1 (lower is better) Translates to: CIANTALGSEENPCL*RQRSHIRHSTHTPH Trigger: GTGTGGTGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR GCA 90 bp	AACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTaGCTCTGCAGGCAGAGGTCACACATAAGGCACTCTACTCACACA	+
Preference number: 1 (lower is better) Translates to: NLCIANTALGSEENP*LCRQRSHIRHSTHT Trigger: TGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR GCA 90 bp	GGCATCCTAGGAAGAGAACTTTCCAGAACCACAGGCACTAATCCCTaGCGTGGTCTGCTAGACAGTTTGGTTGAATGCCTATGTGGCCTG	+
Preference number: 1 (lower is better) Translates to: GILGRELSRTTGTNP*RGLLDSLVECLCGL Trigger: CAGGCCACATAGGCATTCAACCAAACTGTCTAGCAGACCACGGCAGGGATTAGTGCCTGTGGTTCTGGAAAGTTCTCTTCCTAGGATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR CCA 90 bp	CACACACACACACACACACACACACAGAGGATGACCTACACACAATaGTGGGAGGCACTCAACCAGTGGAGCTCTCCTGATGAACAGAAG	+
Preference number: 1 (lower is better) Translates to: HTHTHTHTQRMTYTQ*WEALNQWSSPDEQK Trigger: CTTCTGTTCATCAGGAGAGCTCCACTGGTTGAGTGCCTCCCACCATTGTGTGTAGGTCATCCTCTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR TCA 90 bp	AGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTTGGGAATaGAATGAGAGTTTCTCCTTTAGACCAGCAGATTTCAGGCCACAC	+
Preference number: 1 (lower is better) Translates to: RPQILGVHKSWAAWE*NESFSFRPADFRPH Trigger: GTGTGGCCTGAAATCTGCTGGTCTAAAGGAGAAACTCTCATTTCATTCCCAAGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR TCA 90 bp	ACACGGCCCTACCTGAGGGCTCTCAGAAATGGTTACAATGTCTTTTaGAAGCCACTTGCTCCTTTCTTAGCTGTATCTGGGCCCTTTCCC	+
Preference number: 1 (lower is better) Translates to: TRPYLRALRNGYNVF*KPLAPFLAVSGPFP Trigger: GGGAAAGGGCCCAGATACAGCTAAGAAAGGAGCAAGTGGCTTTCAAAAGACATTGTAACCATTTCTGAGAGCCCTCAGGTAGGGCCGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR CCA 90 bp	AAAGGAGGTTATGTCCACACGGCCCTACCTGAGGGCTCTCAGAAATaGTTACAATGTCTTTTGAAAGCCACTTGCTCCTTTCTTAGCTGT	+
Preference number: 1 (lower is better) Translates to: KGGYVHTALPEGSQK*LQCLLKATCSFLSC Trigger: ACAGCTAAGAAAGGAGCAAGTGGCTTTCAAAAGACATTGTAACCATTTCTGAGAGCCCTCAGGTAGGGCCGTGTGGACATAACCTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR-3UTR GCA 90 bp	ACTCCTCCAGCTGTCAGCCCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGACCCCCGCGGTGTCTaGTTCTCACTTGCTCCCAAG	+
Preference number: 2 (lower is better) Translates to: TPPAVSPLPRTSVGEGILDPRGV*FSLAPK Trigger: CTTGGGAGCAAGTGAGAAGCAGACACCGCGGGGGTC...TAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGGGCTGACAGCTGGAGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	TTGCTCCCAAGGGGTGGGAACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCGCCGAAGTTCCCCCATaGAAGCAGAAGAAGCCAGGC	+
Preference number: 2 (lower is better) Translates to: LLPRGGNTAPPLWRSDSSAEVPP*KQKKPG Trigger: GCCTGGCTTCTTCTGCTTCCATGGGGGAACTTCGGC...GCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTTCCCACCCCTTGGGAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	TCACCCACAACACCCCTTTCTCTTCACCTGAACTTCCACCTTCCCCGCGACCTACTGTGCCCGCACACCTaGATCTGGCCACAGTCTCCA	+
Preference number: 2 (lower is better) Translates to: SPTTPLSLHLNFHLPRDLLCPHT*IWPQSP Trigger: TGGAGACTGTGGCCAGATCCAGGTGTGCGGGCACAG...TAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	TCACCCACAACACCCCTTTCTCTTCACCTGAACTTCCACCTTCCCCGCGACCTAAACAGTTCTGGCCTCTaGCAGACCCCCGCGGTGTCT	+
Preference number: 2 (lower is better) Translates to: SPTTPLSLHLNFHLPRDLNSSGL*QTPAVS Trigger: AGACACCGCGGGGGTCTGCCAGAGGCCAGAACTGTT...TAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR GCA 90 bp	ACTCCTCCAGCTGTCAGCCCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAACCCTAGGAATGCTCTaGACACAGCCACAAATCCAG	+
Preference number: 2 (lower is better) Translates to: TPPAVSPLPRTSVGEGILTLGML*TQPQIQ Trigger: CTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGT...TAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGGGCTGACAGCTGGAGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGCTGTGCCCGCACACCTaGATCTGGCCACAGTCTCCA	+
Preference number: 2 (lower is better) Translates to: VKVQTTVDTARTRFEGPWLCPHT*IWPQSP Trigger: TGGAGACTGTGGCCAGATCCAGGTGTGCGGGCACAG...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR TCA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGATACTGCTCTGGGGTCTaGGGAAAATCCCTGCCTCTG	+
Preference number: 2 (lower is better) Translates to: PLPRTSVGEGILGRELSRYCSGV*GKSLPL Trigger: CAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTA...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR TCA 90 bp	TTCCCCGCGACCTACCCTCTGCCCTCAACACAACTGAACCAGGAGTCCTTGACAGCTAGACAGTTTGGTTaGATGCCTATGTGGCCTGGC	+
Preference number: 2 (lower is better) Translates to: FPATYPLPSTQLNQESLTARQFG*MPMWPG Trigger: GCCAGGCCACATAGGCATTCAACCAAACTGTCTAGC...TGTCAAGGACTCCTGGTTCAGTTGTGTTGAGGGCAGAGGGTAGGTCGCGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGGCCGAAGTTCCCCCATaGAAGCAGAAGAAGCCAGGC	+
Preference number: 2 (lower is better) Translates to: VKVQTTVDTARTRFEGPWAEVPP*KQKKPG Trigger: GCCTGGCTTCTTCTGCTTCCATGGGGGAACTTCGGC...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	AACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGCGCCGAAGTTCCCCCATaGAAGCAGAAGAAGCCAGGC	+
Preference number: 2 (lower is better) Translates to: NLCIANTALGSEENPCLCAEVPP*KQKKPG Trigger: GCCTGGCTTCTTCTGCTTCCATGGGGGAACTTCGGC...GCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	ACTCCTCCAGCTGTCAGCCCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTATCGCTAATACTGCTCTaGGGTCTGAGGAAAATCCCT	+
Preference number: 2 (lower is better) Translates to: TPPAVSPLPRTSVGEGILSLILL*GLRKIP Trigger: AGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGA...TAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGGGCTGACAGCTGGAGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR GCA 90 bp	TTCCCCGCGACCTACCCTCTGCCCTCAACACAACTGAACCAGGAGTCCTTGACAACCCTAGGAATGCTCTaGACACAGCCACAAATCCAG	+
Preference number: 2 (lower is better) Translates to: FPATYPLPSTQLNQESLTTLGML*TQPQIQ Trigger: CTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGT...TGTCAAGGACTCCTGGTTCAGTTGTGTTGAGGGCAGAGGGTAGGTCGCGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR TCA 90 bp	TTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACACAGCGAGGTACTGCTCTGGGGTCTaGGGAAAATCCCTGCCTCTG	+
Preference number: 2 (lower is better) Translates to: LTTSPNAVKVQTTVDTARYCSGV*GKSLPL Trigger: CAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTA...CCTCGCTGTGTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR GCA 90 bp	TGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGCAGGCAGACCCTAGGAATGCTCTaGACACAGCCACAAATCCAG	+
Preference number: 2 (lower is better) Translates to: CIANTALGSEENPCLCRQTLGML*TQPQIQ Trigger: CTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGT...CTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR GCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGGACAGTTTGGTTGAATaGCTATGTGGCCTGGCCTGG	+
Preference number: 2 (lower is better) Translates to: VKVQTTVDTARTRFEGPWDSLVE*LCGLAW Trigger: CCAGGCCAGGCCACATAGGCATTCAACCAAACTGTC...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR TCA 90 bp	TACACGGCTGACCACCCCACACAGCTGCTGGAAGTTTCCAGTACAGTCAGATTAGCTAGACAGTTTGGTTaGATGCCTATGTGGCCTGGC	+
Preference number: 2 (lower is better) Translates to: YTADHPTQLLEVSSTVRLARQFG*MPMWPG Trigger: GCCAGGCCACATAGGCATTCAACCAAACTGTCTAGC...TAATCTGACTGTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR-3UTR TCA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACCAGAACCTCTGTGGGTaGAGGCATCCTAGGAAGAGA	+
Preference number: 2 (lower is better) Translates to: QESLTTSPNAVKVQTTVDQNLCG*RHPRKR Trigger: TCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTG...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR TCA 90 bp	CACATAGAGACTCAGTCCATAGCACTTGTGACTTACCCAGTTCAAGGGGCAAGACCCTTTCTCTTCACCTaGACTTCCACCTTCCCCGCG	+
Preference number: 2 (lower is better) Translates to: HIETQSIALVTYPVQGARPFLFT*TSTFPA Trigger: CGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGG...TCTTGCCCCTTGAACTGGGTAAGTCACAAGTGCTATGGACTGAGTCTCTATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR-3UTR GCA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACTCTGAGGAAAATCCCTaGCTCTGCAGGCAGAGGTCA	+
Preference number: 2 (lower is better) Translates to: QESLTTSPNAVKVQTTVDSEENP*LCRQRS Trigger: TGACCTCTGCCTGCAGAGGCAGGGATTTTCCTCAGA...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR GCA 90 bp	TACACGGCTGACCACCCCACACAGCTGCTGGAAGTTTCCAGTACAGTCAGATTAGAAAATCCCTGCCTCTaGAGGCAGAGGTCACACATA	+
Preference number: 2 (lower is better) Translates to: YTADHPTQLLEVSSTVRLENPCL*RQRSHI Trigger: TATGTGTGACCTCTGCCTGCAGAGGCAGGGATTTTC...TAATCTGACTGTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR CAA 90 bp	CACACGGCCCTACCTGAGGGCTCTCAGAAATGGTTACAATGTCTTTaGAAAGCCACTTGCTCCTTTCTTAGCTGTATCTGGGCCCTTTCC	+
Preference number: 2 (lower is better) Translates to: HTALPEGSQKWLQCL*KATCSFLSCIWALS Trigger: GGAAAGGGCCCAGATACAGCTAAGAAAGGAGCAAGTGGCTTTCAAAAGACATTGTAACCATTTCTGAGAGCCCTCAGGTAGGGCCGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR-3UTR CCA 90 bp	TCACCCACAACACCCCTTTCTCTTCACCTGAACTTCCACCTTCCCCGCGACCTACACAGATCATTCACTTaGACTCTTAACGTGACAGCA	+
Preference number: 2 (lower is better) Translates to: SPTTPLSLHLNFHLPRDLHRSFT*TLNVTA Trigger: TGCTGTCACGTTAAGAGTCCAAGTGAATGATCTGTG...TAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	TACACGGCTGACCACCCCACACAGCTGCTGGAAGTTTCCAGTACAGTCAGATTATCGCTAATACTGCTCTaGGGTCTGAGGAAAATCCCT	+
Preference number: 2 (lower is better) Translates to: YTADHPTQLLEVSSTVRLSLILL*GLRKIP Trigger: AGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGA...TAATCTGACTGTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR-3UTR CCA 90 bp	TTACATGAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGCTGTGCCCGCACACCTaGATCTGGCCACAGTCTCCA	+
Preference number: 2 (lower is better) Translates to: LHEIYILRPQILGVHKSWLCPHT*IWPQSP Trigger: TGGAGACTGTGGCCAGATCCAGGTGTGCGGGCACAG...CCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTCATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	TTACATGAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGAACAGTTCTGGCCTCTaGCAGACCCCCGCGGTGTCT	+
Preference number: 2 (lower is better) Translates to: LHEIYILRPQILGVHKSWNSSGL*QTPAVS Trigger: AGACACCGCGGGGGTCTGCCAGAGGCCAGAACTGTT...CCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTCATGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR TCA 90 bp	TACACGGCTGACCACCCCACACAGCTGCTGGAAGTTTCCAGTACAGTCAGATTATGGGCTGCTTGGGAATaGAATGAGAGTTTCTCCTTT	+
Preference number: 2 (lower is better) Translates to: YTADHPTQLLEVSSTVRLWAAWE*NESFSF Trigger: AAAGGAGAAACTCTCATTTCATTCCCAAGCAGCCCA...TAATCTGACTGTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR-3UTR GCA 90 bp	TTGCTCCCAAGGGGTGGGAACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCATCTTCCTAAAGAAATaGAGGCATTTAAGGGGGTTT	+
Preference number: 2 (lower is better) Translates to: LLPRGGNTAPPLWRSDSSIFLKK*RHLRGF Trigger: AAACCCCCTTAAATGCCTGCATTTCTTTAGGAAGAT...GCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTTCCCACCCCTTGGGAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR GCA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCGACAGTTTGGTTGAATaGCTATGTGGCCTGGCCTGG	+
Preference number: 2 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTDSLVE*LCGLAW Trigger: CCAGGCCAGGCCACATAGGCATTCAACCAAACTGTC...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR-3UTR CCA 90 bp	CACATAGAGACTCAGTCCATAGCACTTGTGACTTACCCAGTTCAAGGGGCAAGACACAGATCATTCACTTaGACTCTTAACGTGACAGCA	+
Preference number: 2 (lower is better) Translates to: HIETQSIALVTYPVQGARHRSFT*TLNVTA Trigger: TGCTGTCACGTTAAGAGTCCAAGTGAATGATCTGTG...TCTTGCCCCTTGAACTGGGTAAGTCACAAGTGCTATGGACTGAGTCTCTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR TCA 72 bp	TCTCACCCTCACCCACAACACCCCTTTCTCTTCACCTaGACTTCCACCTTCCCCGCGACCTACCCTCTGCCC	+
Preference number: 3 (lower is better) Translates to: SHPHPQHPFLFT*TSTFPATYPLP Trigger: GGGCAGAGGGTAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGAGGGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR CCA 72 bp	CTCTCGCTTCTAACCTCTGCATCGCTAATACTGCTCTaGGGTCTGAGGAAAATCCCTGCCTCTGCAGGCAGA	+
Preference number: 3 (lower is better) Translates to: LSLLTSASLILL*GLRKIPASAGR Trigger: TCTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAGAAGCGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR GCA 72 bp	AATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTaGAGGCAGAGGTCACACATAAGGCACTCTACTCAC	+
Preference number: 3 (lower is better) Translates to: NTALGSEENPCL*RQRSHIRHSTH Trigger: GTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR GCA 72 bp	ATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTaGCTCTGCAGGCAGAGGTCACACATAAGGCACTCT	+
Preference number: 3 (lower is better) Translates to: IANTALGSEENP*LCRQRSHIRHS Trigger: AGAGTGCCTTATGTGTGACCTCTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR CCA 72 bp	ACACACACACACACACAGAGGATGACCTACACACAATaGTGGGAGGCACTCAACCAGTGGAGCTCTCCTGAT	+
Preference number: 3 (lower is better) Translates to: THTHTQRMTYTQ*WEALNQWSSPD Trigger: ATCAGGAGAGCTCCACTGGTTGAGTGCCTCCCACCATTGTGTGTAGGTCATCCTCTGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR GCA 72 bp	ATCTGGCCACAGTCTCCACCTCTCGCTTCTAACCTCTaGATCGCTAATACTGCTCTGGGGTCTGAGGAAAAT	+
Preference number: 3 (lower is better) Translates to: IWPQSPPLASNL*IANTALGSEEN Trigger: ATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAGAAGCGAGAGGTGGAGACTGTGGCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR CCA 72 bp	ATGACCTACACACAATGGTGGGAGGCACTCAACCAGTaGAGCTCTCCTGATGAACAGAAGGATTGGAGGTCA	+
Preference number: 3 (lower is better) Translates to: MTYTQWWEALNQ*SSPDEQKDWRS Trigger: TGACCTCCAATCCTTCTGTTCATCAGGAGAGCTCCACTGGTTGAGTGCCTCCCACCATTGTGTGTAGGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR TCA 72 bp	AGTTTCAGTTTCTTTGTCTGTCAAAGGGTACACGGCTaGCCACCCCACACAGCTGCTGGAAGTTTCCAGTAC	+
Preference number: 3 (lower is better) Translates to: SFSFFVCQRVHG*PPHTAAGSFQY Trigger: GTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTACCCTTTGACAGACAAAGAAACTGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR GCA 72 bp	GGAAGAGAACTTTCCAGAACCACAGGCACTAATCCCTaGCGTGGTCTGCTAGACAGTTTGGTTGAATGCCTA	+
Preference number: 3 (lower is better) Translates to: GRELSRTTGTNP*RGLLDSLVECL Trigger: TAGGCATTCAACCAAACTGTCTAGCAGACCACGGCAGGGATTAGTGCCTGTGGTTCTGGAAAGTTCTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR GCA 72 bp	GCAGTCAGTAGGGTGGGAAGTATCTTCCTAAAGAAATaGAGGCATTTAAGGGGGTTTCCCCTAAGAAGAGCC	+
Preference number: 3 (lower is better) Translates to: AVSRVGSIFLKK*RHLRGFPLRRA Trigger: GGCTCTTCTTAGGGGAAACCCCCTTAAATGCCTGCATTTCTTTAGGAAGATACTTCCCACCCTACTGACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR CCA 72 bp	CTTTTGAAAGCCACTTGCTCCTTTCTTAGCTGTATCTaGGCCCTTTCCCTGGGAGGGAATCACATAGAGACT	+
Preference number: 3 (lower is better) Translates to: LLKATCSFLSCI*ALSLGGNHIET Trigger: AGTCTCTATGTGATTCCCTCCCAGGGAAAGGGCCCAGATACAGCTAAGAAAGGAGCAAGTGGCTTTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR-3UTR CAA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCGTGTCTGCTTCTCACTaGCTCCCAAGGGGTGGGAAC	+
Preference number: 3 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTVSASH*LPRGGN Trigger: GTTCCCACCCCTTGGGAGCAAGTGAGAAGCAGACAC...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR TCA 72 bp	ATCCTTGGGGTCCATAAGTCCTGGGCTGCTTGGGAATaGAATGAGAGTTTCTCCTTTAGACCAGCAGATTTC	+
Preference number: 3 (lower is better) Translates to: ILGVHKSWAAWE*NESFSFRPADF Trigger: GAAATCTGCTGGTCTAAAGGAGAAACTCTCATTTCATTCCCAAGCAGCCCAGGACTTATGGACCCCAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR CCA 72 bp	TATGTCCACACGGCCCTACCTGAGGGCTCTCAGAAATaGTTACAATGTCTTTTGAAAGCCACTTGCTCCTTT	+
Preference number: 3 (lower is better) Translates to: YVHTALPEGSQK*LQCLLKATCSF Trigger: AAAGGAGCAAGTGGCTTTCAAAAGACATTGTAACCATTTCTGAGAGCCCTCAGGTAGGGCCGTGTGGACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
3UTR TCA 72 bp	TACCTGAGGGCTCTCAGAAATGGTTACAATGTCTTTTaGAAGCCACTTGCTCCTTTCTTAGCTGTATCTGGG	+
Preference number: 3 (lower is better) Translates to: YLRALRNGYNVF*KPLAPFLAVSG Trigger: CCCAGATACAGCTAAGAAAGGAGCAAGTGGCTTTCAAAAGACATTGTAACCATTTCTGAGAGCCCTCAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
CDS-3UTR CCA 90 bp	AAGAAGAGCCGAAGTTCCCCCATGGAAGCAGAAGAAGCCAGGCCTCGGGGAGGGGGTCACGCTGGGAGCTaGGCTGCCCTCAGCAGTGCA	+
Preference number: 4 (lower is better) Translates to: KKSRSSPMEAEEARPRGGGHAGS*AALSSA Trigger: TGCACTGCTGAGGGCAGCCCAGCTCCCAGCGTGACC...CCCTCCCCGAGGCCTGGCTTCTTCTGCTTCCATGGGGGAACTTCGGCTCTTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	AAGAAGAGCCGAAGTTCCCCCATGGAAGCAGAAGAAGCCAGGCCTCGGGGAGGGAGCAGTGCAAGAGGCTaGCAACGTCAGGCCCTGGCC	+
Preference number: 4 (lower is better) Translates to: KKSRSSPMEAEEARPRGGSSARG*QRQALA Trigger: GGCCAGGGCCTGACGTTGGCAGCCTCTTGCACTGCT...CCCTCCCCGAGGCCTGGCTTCTTCTGCTTCCATGGGGGAACTTCGGCTCTTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	AACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCTCCAGCTGTGCCCGCACAGTCTCGTGGGGGCGGTaGTTGCTCCACGCGGTCCTC	+
Preference number: 4 (lower is better) Translates to: NTAPPLWRSDSSSSCARTVSWGR*LLHAVL Trigger: GAGGACCGCGTGGAGCAACCACCGCCCCCACGAGAC...TGTGCGGGCACAGCTGGAGCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TTGCTCCCAAGGGGTGGGAACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCGTCTCGTGGGGGCGGTaGTTGCTCCACGCGGTCCTC	+
Preference number: 4 (lower is better) Translates to: LLPRGGNTAPPLWRSDSSVSWGR*LLHAVL Trigger: GAGGACCGCGTGGAGCAACCACCGCCCCCACGAGAC...GCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTTCCCACCCCTTGGGAGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	ACTCCTCCAGCTGTCAGCCCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTACGGCTGGGAAGGTGCTaGCTCTGCATTCGTACTCGC	+
Preference number: 4 (lower is better) Translates to: TPPAVSPLPRTSVGEGILRLGRC*LCIRTR Trigger: GCGAGTACGAATGCAGAGTCAGCACCTTCCCAGCCG...TAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGGGCTGACAGCTGGAGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TTGCTCCCAAGGGGTGGGAACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCTGGAGCAGGCCAGGGTaGGACACCACGCAGGTCAGC	+
Preference number: 4 (lower is better) Translates to: LLPRGGNTAPPLWRSDSSWSRPG*DTTQVS Trigger: GCTGACCTGCGTGGTGTCTCACCCTGGCCTGCTCCA...GCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTTCCCACCCCTTGGGAGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	ACTCCTCCAGCTGTCAGCCCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTATCGCCCTCATCAGCTTaGACAGCGTTGCGCAGGAGG	+
Preference number: 4 (lower is better) Translates to: TPPAVSPLPRTSVGEGILSPSSA*TALRRR Trigger: CCTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGA...TAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGGGCTGACAGCTGGAGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CCCTGCCTCTGCAGGCAGAGGTCACACATAAGGCACTCTACTCACACACCACACCGCTGGGAGCTGGGCTaGCCTCAGCAGTGCAAGAGG	+
Preference number: 4 (lower is better) Translates to: PCLCRQRSHIRHSTHTPHRWELG*PQQCKR Trigger: CCTCTTGCACTGCTGAGGGCAGCCCAGCTCCCAGCG...GTGTGGTGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAGGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	AACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCTCCAGCTGTGCCCGCACAAGACGCATCCGTGCCTaGAAGCTGCCGGCTGGGAAG	+
Preference number: 4 (lower is better) Translates to: NTAPPLWRSDSSSSCARTRRIRA*KLPAGK Trigger: CTTCCCAGCCGGCAGCTTTCAGGCACGGATGCGTCT...TGTGCGGGCACAGCTGGAGCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TCACCCACAACACCCCTTTCTCTTCACCTGAACTTCCACCTTCCCCGCGACCTATGGAGCAGGCCAGGGTaGGACACCACGCAGGTCAGC	+
Preference number: 4 (lower is better) Translates to: SPTTPLSLHLNFHLPRDLWSRPG*DTTQVS Trigger: GCTGACCTGCGTGGTGTCTCACCCTGGCCTGCTCCA...TAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	GGCCACCAGAGGGCAGAGGGCTTCTGTAACAGTTCTGGCCTCTGGCAGACCCCCTTGATGCCTTCATCCTaGTCGTCGTCCTCCTCTGTC	+
Preference number: 4 (lower is better) Translates to: GHQRAEGFCNSSGLWQTPLMPSS*SSSSSV Trigger: GACAGAGGAGGACGACGATCAGGATGAAGGCATCAA...GGGGGTCTGCCAGAGGCCAGAACTGTTACAGAAGCCCTCTGCCCTCTGGTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	TCACCCACAACACCCCTTTCTCTTCACCTGAACTTCCACCTTCCCCGCGACCTAGTCCACTCGAGCCCATaGCACCTGCCCCACCTGCTC	+
Preference number: 4 (lower is better) Translates to: SPTTPLSLHLNFHLPRDLVHSSP*HLPHLL Trigger: GAGCAGGTGGGGCAGGTGGCATGGGCTCGAGTGGAC...TAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGAGTCCACTCGAGCCCATaGCACCTGCCCCACCTGCTC	+
Preference number: 4 (lower is better) Translates to: PLPRTSVGEGILGRELSRVHSSP*HLPHLL Trigger: GAGCAGGTGGGGCAGGTGGCATGGGCTCGAGTGGAC...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	GGCCACCAGAGGGCAGAGGGCTTCTGTAACAGTTCTGGCCTCTGGCAGACCCCCTCATCTGCTGGGCTTTaGGGCGATGATATCGGGACA	+
Preference number: 4 (lower is better) Translates to: GHQRAEGFCNSSGLWQTPSSAGL*GDDIGT Trigger: TGTCCCGATATCATCGCCGCAAAGCCCAGCAGATGA...GGGGGTCTGCCAGAGGCCAGAACTGTTACAGAAGCCCTCTGCCCTCTGGTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGAGGTCACGCTGGGAGCTaGGCTGCCCTCAGCAGTGCA	+
Preference number: 4 (lower is better) Translates to: PLPRTSVGEGILGRELSRGHAGS*AALSSA Trigger: TGCACTGCTGAGGGCAGCCCAGCTCCCAGCGTGACC...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CTCTGCAGGCAGAGGTCACACATAAGGCACTCTACTCACACACCACACCCTAGGTGTCCCAGGTCACGCTaGGAGCTGGGCTGCCCTCAG	+
Preference number: 4 (lower is better) Translates to: LCRQRSHIRHSTHTPHPRCPRSR*ELGCPQ Trigger: CTGAGGGCAGCCCAGCTCCCAGCGTGACCTGGGACA...CCTAGGGTGTGGTGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	AAGAAGAGCCGAAGTTCCCCCATGGAAGCAGAAGAAGCCAGGCCTCGGGGAGGGGGCAGTTTTGCATCCTaGCCCAGCACCACTGTCACT	+
Preference number: 4 (lower is better) Translates to: KKSRSSPMEAEEARPRGGGSFAS*PSTTVT Trigger: AGTGACAGTGGTGCTGGGTCAGGATGCAAAACTGCC...CCCTCCCCGAGGCCTGGCTTCTTCTGCTTCCATGGGGGAACTTCGGCTCTTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	GGCCACCAGAGGGCAGAGGGCTTCTGTAACAGTTCTGGCCTCTGGCAGACCCCCACTTCCACAGTGACCTaGGAATCCCTCGAAGAAAGC	+
Preference number: 4 (lower is better) Translates to: GHQRAEGFCNSSGLWQTPTSTVT*ESLEES Trigger: GCTTTCTTCGAGGGATTCTCAGGTCACTGTGGAAGT...GGGGGTCTGCCAGAGGCCAGAACTGTTACAGAAGCCCTCTGCCCTCTGGTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGAAGCAGTGCAAGAGGCTaGCAACGTCAGGCCCTGGCC	+
Preference number: 4 (lower is better) Translates to: PLPRTSVGEGILGRELSRSSARG*QRQALA Trigger: GGCCAGGGCCTGACGTTGGCAGCCTCTTGCACTGCT...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	TTGCTCCCAAGGGGTGGGAACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCGGCTGCCCTCAGCAGTaGAAGAGGCTGCCAACGTCA	+
Preference number: 4 (lower is better) Translates to: LLPRGGNTAPPLWRSDSSGCPQQ*KRLPTS Trigger: TGACGTTGGCAGCCTCTTGCACTGCTGAGGGCAGCC...GCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTTCCCACCCCTTGGGAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGCGCTGGGAGCTGGGCTaGCCTCAGCAGTGCAAGAGG	+
Preference number: 4 (lower is better) Translates to: VKVQTTVDTARTRFEGPWRWELG*PQQCKR Trigger: CCTCTTGCACTGCTGAGGGCAGCCCAGCTCCCAGCG...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACTGGAGCAGGCCAGGGTaGGACACCACGCAGGTCAGC	+
Preference number: 4 (lower is better) Translates to: QESLTTSPNAVKVQTTVDWSRPG*DTTQVS Trigger: GCTGACCTGCGTGGTGTCTCACCCTGGCCTGCTCCA...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TTGCTCCCAAGGGGTGGGAACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCCTTGGAGGGTGTGGGTaGTTCTTCGGTCCTGGAGCA	+
Preference number: 4 (lower is better) Translates to: LLPRGGNTAPPLWRSDSSLGGCG*FFGPGA Trigger: TGCTCCAGGACCGAAGAATCACCCACACCCTCCAAG...GCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTTCCCACCCCTTGGGAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	AAGAAGAGCCGAAGTTCCCCCATGGAAGCAGAAGAAGCCAGGCCTCGGGGAGGGAGCTACTGTTGTCCTTaGGACTATCAGGGTGGCCCT	+
Preference number: 4 (lower is better) Translates to: KKSRSSPMEAEEARPRGGSYCCP*DYQGGP Trigger: AGGGCCACCCTGATAGTCTCAAGGACAACAGTAGCT...CCCTCCCCGAGGCCTGGCTTCTTCTGCTTCCATGGGGGAACTTCGGCTCTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CCACACCCTAGGAATGCTCTGCACACAGCCACAAATCCAGTAGCACACAGATCAGTCCACTCGAGCCCATaGCACCTGCCCCACCTGCTC	+
Preference number: 4 (lower is better) Translates to: PHPRNALHTATNPVAHRSVHSSP*HLPHLL Trigger: GAGCAGGTGGGGCAGGTGGCATGGGCTCGAGTGGAC...TGATCTGTGTGCTACTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CTAACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTCGCTGGGAGCTGGGCTaGCCTCAGCAGTGCAAGAGG	+
Preference number: 4 (lower is better) Translates to: LTSASLILLWGLRKIPASRWELG*PQQCKR Trigger: CCTCTTGCACTGCTGAGGGCAGCCCAGCTCCCAGCG...AGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TACACGGCTGACCACCCCACACAGCTGCTGGAAGTTTCCAGTACAGTCAGATTATGTCCCAGGTCACGCTaGGAGCTGGGCTGCCCTCAG	+
Preference number: 4 (lower is better) Translates to: YTADHPTQLLEVSSTVRLCPRSR*ELGCPQ Trigger: CTGAGGGCAGCCCAGCTCCCAGCGTGACCTGGGACA...TAATCTGACTGTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
CDS-3UTR CCA 90 bp	AAGAAGAGCCGAAGTTCCCCCATGGAAGCAGAAGAAGCCAGGCCTCGGGGAGGGGTGTCCAGTTGTATTTaGGAGGGGGCTGTCCTTCAC	+
Preference number: 4 (lower is better) Translates to: KKSRSSPMEAEEARPRGGVSSCI*EGAVLH Trigger: GTGAAGGACAGCCCCCTCCCAAATACAACTGGACAC...CCCTCCCCGAGGCCTGGCTTCTTCTGCTTCCATGGGGGAACTTCGGCTCTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TTCCCCGCGACCTACCCTCTGCCCTCAACACAACTGAACCAGGAGTCCTTGACATTGAGACTATCAGGGTaGCCCTCCGCTCTCAGCCCT	+
Preference number: 4 (lower is better) Translates to: FPATYPLPSTQLNQESLTLRLSG*PSALSP Trigger: AGGGCTGAGAGCGGAGGGCCACCCTGATAGTCTCAA...TGTCAAGGACTCCTGGTTCAGTTGTGTTGAGGGCAGAGGGTAGGTCGCGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TTGCTCCCAAGGGGTGGGAACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCGTAGCTGCGGCCTTCTaGCTCTTCACTCTGGCTCCT	+
Preference number: 4 (lower is better) Translates to: LLPRGGNTAPPLWRSDSSVAAAF*LFTLAP Trigger: AGGAGCCAGAGTGAAGAGCCAGAAGGCCGCAGCTAC...GCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTTCCCACCCCTTGGGAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094325.5
CDS-3UTR TCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGCGGCTGGGAAGGTGCTaGCTCTGCATTCGTACTCGC	+
Preference number: 4 (lower is better) Translates to: VKVQTTVDTARTRFEGPWRLGRC*LCIRTR Trigger: GCGAGTACGAATGCAGAGTCAGCACCTTCCCAGCCG...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACAGACGCATCCGTGCCTaGAAGCTGCCGGCTGGGAAG	+
Preference number: 4 (lower is better) Translates to: QESLTTSPNAVKVQTTVDRRIRA*KLPAGK Trigger: CTTCCCAGCCGGCAGCTTTCAGGCACGGATGCGTCT...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CCACACCCTAGGAATGCTCTGCACACAGCCACAAATCCAGTAGCACACAGATCAAGACGCATCCGTGCCTaGAAGCTGCCGGCTGGGAAG	+
Preference number: 4 (lower is better) Translates to: PHPRNALHTATNPVAHRSRRIRA*KLPAGK Trigger: CTTCCCAGCCGGCAGCTTTCAGGCACGGATGCGTCT...TGATCTGTGTGCTACTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGAGATGGAACTCTGAAGTaGCGGCAGCTGAGCGTGGGT	+
Preference number: 4 (lower is better) Translates to: PLPRTSVGEGILGRELSRDGTLK*RQLSVG Trigger: ACCCACGCTCAGCTGCCGTCACTTCAGAGTTCCATC...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CTCTGCAGGCAGAGGTCACACATAAGGCACTCTACTCACACACCACACCCTAGGCTTGGAGGGTGTGGGTaGTTCTTCGGTCCTGGAGCA	+
Preference number: 4 (lower is better) Translates to: LCRQRSHIRHSTHTPHPRLGGCG*FFGPGA Trigger: TGCTCCAGGACCGAAGAATCACCCACACCCTCCAAG...CCTAGGGTGTGGTGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGCAGGCAGTGGGCTTTGCGGCGATaGTATCGGGACATGAGCACC	+
Preference number: 4 (lower is better) Translates to: CIANTALGSEENPCLCRQWALRR*YRDMST Trigger: GGTGCTCATGTCCCGATATCATCGCCGCAAAGCCCA...CTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CTAACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTAGCAGTGCAAGAGGCTaGCAACGTCAGGCCCTGGCC	+
Preference number: 4 (lower is better) Translates to: LTSASLILLWGLRKIPASSSARG*QRQALA Trigger: GGCCAGGGCCTGACGTTGGCAGCCTCTTGCACTGCT...AGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGACTGAAAGCTGCCGGCTaGGAAGGTGCTGACTCTGCA	+
Preference number: 4 (lower is better) Translates to: PLPRTSVGEGILGRELSRLKAAG*EGADSA Trigger: TGCAGAGTCAGCACCTTCCCAGCCGGCAGCTTTCAG...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	ACTCCTCCAGCTGTCAGCCCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAACTTGCCACAAGTTTTaGTCCTCAAGGCCCCTCACA	+
Preference number: 4 (lower is better) Translates to: TPPAVSPLPRTSVGEGILTCHKF*SSRPLT Trigger: TGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGT...TAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGGGCTGACAGCTGGAGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CCCTGCCTCTGCAGGCAGAGGTCACACATAAGGCACTCTACTCACACACCACACGTGCTCAGTAGTCAGTaGGGGAAAGCCCAGAGTGTC	+
Preference number: 4 (lower is better) Translates to: PCLCRQRSHIRHSTHTPHVLSSQ*GKAQSV Trigger: GACACTCTGGGCTTTCCCCCACTGACTACTGAGCAC...GTGTGGTGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAGGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGTCGACTGTGTGCCCTTaGCCTCTGTGTCCCAGGTCA	+
Preference number: 4 (lower is better) Translates to: VKVQTTVDTARTRFEGPWSTVCP*PLCPRS Trigger: TGACCTGGGACACAGAGGTCAAGGGCACACAGTCGA...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	AACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGCGATGGAACTCTGAAGTaGCGGCAGCTGAGCGTGGGT	+
Preference number: 4 (lower is better) Translates to: NLCIANTALGSEENPCLCDGTLK*RQLSVG Trigger: ACCCACGCTCAGCTGCCGTCACTTCAGAGTTCCATC...GCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	TTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACACAGCGAGGGGCTGCCCTCAGCAGTaGAAGAGGCTGCCAACGTCA	+
Preference number: 4 (lower is better) Translates to: LTTSPNAVKVQTTVDTARGCPQQ*KRLPTS Trigger: TGACGTTGGCAGCCTCTTGCACTGCTGAGGGCAGCC...CCTCGCTGTGTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGCTGAAAGCTGCCGGCTaGGAAGGTGCTGACTCTGCA	+
Preference number: 4 (lower is better) Translates to: VKVQTTVDTARTRFEGPWLKAAG*EGADSA Trigger: TGCAGAGTCAGCACCTTCCCAGCCGGCAGCTTTCAG...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTTGTCCCAGGTCACGCTaGGAGCTGGGCTGCCCTCAG	+
Preference number: 4 (lower is better) Translates to: EIYILRPQILGVHKSWAACPRSR*ELGCPQ Trigger: CTGAGGGCAGCCCAGCTCCCAGCGTGACCTGGGACA...AGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TTCCCCGCGACCTACCCTCTGCCCTCAACACAACTGAACCAGGAGTCCTTGACATCACTGTGGTTAACGTaGAGTAGCTGCGGCCTTCTG	+
Preference number: 4 (lower is better) Translates to: FPATYPLPSTQLNQESLTSLWLT*SSCGLL Trigger: CAGAAGGCCGCAGCTACTCCACGTTAACCACAGTGA...TGTCAAGGACTCCTGGTTCAGTTGTGTTGAGGGCAGAGGGTAGGTCGCGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CTAACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTTCGACTGTGTGCCCTTaGCCTCTGTGTCCCAGGTCA	+
Preference number: 4 (lower is better) Translates to: LTSASLILLWGLRKIPASSTVCP*PLCPRS Trigger: TGACCTGGGACACAGAGGTCAAGGGCACACAGTCGA...AGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CTAACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGATGGAACTCTGAAGTaGCGGCAGCTGAGCGTGGGT	+
Preference number: 4 (lower is better) Translates to: LTSASLILLWGLRKIPASDGTLK*RQLSVG Trigger: ACCCACGCTCAGCTGCCGTCACTTCAGAGTTCCATC...AGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TTCCCCGCGACCTACCCTCTGCCCTCAACACAACTGAACCAGGAGTCCTTGACACAAGAACTTCCACAGTaGCCTGAGAATCCCTCGAAG	+
Preference number: 4 (lower is better) Translates to: FPATYPLPSTQLNQESLTQELPQ*PENPSK Trigger: CTTCGAGGGATTCTCAGGTCACTGTGGAAGTTCTTG...TGTCAAGGACTCCTGGTTCAGTTGTGTTGAGGGCAGAGGGTAGGTCGCGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CCACACCCTAGGAATGCTCTGCACACAGCCACAAATCCAGTAGCACACAGATCATGGGCTTTGCGGCGATaGTATCGGGACATGAGCACC	+
Preference number: 4 (lower is better) Translates to: PHPRNALHTATNPVAHRSWALRR*YRDMST Trigger: GGTGCTCATGTCCCGATATCATCGCCGCAAAGCCCA...TGATCTGTGTGCTACTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CTTTCCAGAACCACAGGCACTAATCCCTGCCGTGGTCTGCTAGACAGTTTGGTTGAGAGTGCAGCCTCCTaGTGGAGTTCTCCCTGGTCA	+
Preference number: 4 (lower is better) Translates to: LSRTTGTNPCRGLLDSLVESAAS*WSSPWS Trigger: TGACCAGGGAGAACTCCATCAGGAGGCTGCACTCTC...AACCAAACTGTCTAGCAGACCACGGCAGGGATTAGTGCCTGTGGTTCTGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CCACACCCTAGGAATGCTCTGCACACAGCCACAAATCCAGTAGCACACAGATCAGAGAGTGCAGCCTCCTaGTGGAGTTCTCCCTGGTCA	+
Preference number: 4 (lower is better) Translates to: PHPRNALHTATNPVAHRSESAAS*WSSPWS Trigger: TGACCAGGGAGAACTCCATCAGGAGGCTGCACTCTC...TGATCTGTGTGCTACTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGAAGCTACTGTTGTCCTTaGGACTATCAGGGTGGCCCT	+
Preference number: 4 (lower is better) Translates to: PLPRTSVGEGILGRELSRSYCCP*DYQGGP Trigger: AGGGCCACCCTGATAGTCTCAAGGACAACAGTAGCT...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGACATGAAGCCCGTATTTaGAGTGCAGTAGGGCCAGCT	+
Preference number: 4 (lower is better) Translates to: PLPRTSVGEGILGRELSRHEARI*SAVGPA Trigger: AGCTGGCCCTACTGCACTCCAAATACGGGCTTCATG...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CCACACCCTAGGAATGCTCTGCACACAGCCACAAATCCAGTAGCACACAGATCACTGAAAGCTGCCGGCTaGGAAGGTGCTGACTCTGCA	+
Preference number: 4 (lower is better) Translates to: PHPRNALHTATNPVAHRSLKAAG*EGADSA Trigger: TGCAGAGTCAGCACCTTCCCAGCCGGCAGCTTTCAG...TGATCTGTGTGCTACTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TCACCCACAACACCCCTTTCTCTTCACCTGAACTTCCACCTTCCCCGCGACCTAGCAAGGAAGGCCACTTaGAGGGTGTGGGTGATTCTT	+
Preference number: 4 (lower is better) Translates to: SPTTPLSLHLNFHLPRDLARKAT*RVWVIL Trigger: AAGAATCACCCACACCCTCCAAGTGGCCTTCCTTGC...TAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGGTGCTCAGTAGTCAGTaGGGGAAAGCCCAGAGTGTC	+
Preference number: 4 (lower is better) Translates to: VKVQTTVDTARTRFEGPWVLSSQ*GKAQSV Trigger: GACACTCTGGGCTTTCCCCCACTGACTACTGAGCAC...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CTCTGCAGGCAGAGGTCACACATAAGGCACTCTACTCACACACCACACCCTAGGTCACTGTGGTTAACGTaGAGTAGCTGCGGCCTTCTG	+
Preference number: 4 (lower is better) Translates to: LCRQRSHIRHSTHTPHPRSLWLT*SSCGLL Trigger: CAGAAGGCCGCAGCTACTCCACGTTAACCACAGTGA...CCTAGGGTGTGGTGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CTTTCCAGAACCACAGGCACTAATCCCTGCCGTGGTCTGCTAGACAGTTTGGTTGGCAGTTTTGCATCCTaGCCCAGCACCACTGTCACT	+
Preference number: 4 (lower is better) Translates to: LSRTTGTNPCRGLLDSLVGSFAS*PSTTVT Trigger: AGTGACAGTGGTGCTGGGTCAGGATGCAAAACTGCC...AACCAAACTGTCTAGCAGACCACGGCAGGGATTAGTGCCTGTGGTTCTGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TCACCCACAACACCCCTTTCTCTTCACCTGAACTTCCACCTTCCCCGCGACCTACAAGAACTTCCACAGTaGCCTGAGAATCCCTCGAAG	+
Preference number: 4 (lower is better) Translates to: SPTTPLSLHLNFHLPRDLQELPQ*PENPSK Trigger: CTTCGAGGGATTCTCAGGTCACTGTGGAAGTTCTTG...TAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGTTGGCCTGTAAACGATaGCAGGAACAACAGCCGCAG	+
Preference number: 4 (lower is better) Translates to: VKVQTTVDTARTRFEGPWLACKR*QEQQPQ Trigger: CTGCGGCTGTTGTTCCTGGCATCGTTTACAGGCCAA...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CTAACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGAAGCAGGGCAGTTTTaGATCCTGACCCAGCACCAC	+
Preference number: 4 (lower is better) Translates to: LTSASLILLWGLRKIPASEAGQF*ILTQHH Trigger: GTGGTGCTGGGTCAGGATGCAAAACTGCCCTGCTTC...AGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACGAAGCAGGGCAGTTTTaGATCCTGACCCAGCACCAC	+
Preference number: 4 (lower is better) Translates to: QESLTTSPNAVKVQTTVDEAGQF*ILTQHH Trigger: GTGGTGCTGGGTCAGGATGCAAAACTGCCCTGCTTC...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	GAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTTCGCCCTCATCAGCTTaGACAGCGTTGCGCAGGAGG	+
Preference number: 4 (lower is better) Translates to: EIYILRPQILGVHKSWAASPSSA*TALRRR Trigger: CCTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGA...AGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTGCCAACGTCAGGCCCTaGCCCTCTTCTAGTGGTGGA	+
Preference number: 4 (lower is better) Translates to: EIYILRPQILGVHKSWAAANVRP*PSSSGG Trigger: TCCACCACTAGAAGAGGGCCAGGGCCTGACGTTGGC...AGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TACACGGCTGACCACCCCACACAGCTGCTGGAAGTTTCCAGTACAGTCAGATTATTGATGCCTTCATCCTaGTCGTCGTCCTCCTCTGTC	+
Preference number: 4 (lower is better) Translates to: YTADHPTQLLEVSSTVRLLMPSS*SSSSSV Trigger: GACAGAGGAGGACGACGATCAGGATGAAGGCATCAA...TAATCTGACTGTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
CDS-3UTR GCA 90 bp	GGTCAAAGTAGAGCAGTCAGTAGGGTGGGAAGTATCTTCCTAAAGAAATGCAGGTCGCCCTCATCAGCTTaGACAGCGTTGCGCAGGAGG	+
Preference number: 4 (lower is better) Translates to: GQSRAVSRVGSIFLKKCRSPSSA*TALRRR Trigger: CCTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGA...CCTGCATTTCTTTAGGAAGATACTTCCCACCCTACTGACTGCTCTACTTTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CTTTCCAGAACCACAGGCACTAATCCCTGCCGTGGTCTGCTAGACAGTTTGGTTTCATCTGCTGGGCTTTaGGGCGATGATATCGGGACA	+
Preference number: 4 (lower is better) Translates to: LSRTTGTNPCRGLLDSLVSSAGL*GDDIGT Trigger: TGTCCCGATATCATCGCCGCAAAGCCCAGCAGATGA...AACCAAACTGTCTAGCAGACCACGGCAGGGATTAGTGCCTGTGGTTCTGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TACACGGCTGACCACCCCACACAGCTGCTGGAAGTTTCCAGTACAGTCAGATTACATGAAGCCCGTATTTaGAGTGCAGTAGGGCCAGCT	+
Preference number: 4 (lower is better) Translates to: YTADHPTQLLEVSSTVRLHEARI*SAVGPA Trigger: AGCTGGCCCTACTGCACTCCAAATACGGGCTTCATG...TAATCTGACTGTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
CDS-3UTR CCA 90 bp	CTTTCCAGAACCACAGGCACTAATCCCTGCCGTGGTCTGCTAGACAGTTTGGTTCATGAAGCCCGTATTTaGAGTGCAGTAGGGCCAGCT	+
Preference number: 4 (lower is better) Translates to: LSRTTGTNPCRGLLDSLVHEARI*SAVGPA Trigger: AGCTGGCCCTACTGCACTCCAAATACGGGCTTCATG...AACCAAACTGTCTAGCAGACCACGGCAGGGATTAGTGCCTGTGGTTCTGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TTACATGAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGGTCACGCTGGGAGCTaGGCTGCCCTCAGCAGTGCA	+
Preference number: 4 (lower is better) Translates to: LHEIYILRPQILGVHKSWGHAGS*AALSSA Trigger: TGCACTGCTGAGGGCAGCCCAGCTCCCAGCGTGACC...CCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTCATGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGCATTCATACTTCGGCTaGGCACCAGATGGAACTCTG	+
Preference number: 4 (lower is better) Translates to: VKVQTTVDTARTRFEGPWHSYFG*APDGTL Trigger: CAGAGTTCCATCTGGTGCCCAGCCGAAGTATGAATG...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACACAGCGAGGGCAAGGAAGGCCACTTaGAGGGTGTGGGTGATTCTT	+
Preference number: 4 (lower is better) Translates to: LTTSPNAVKVQTTVDTARARKAT*RVWVIL Trigger: AAGAATCACCCACACCCTCCAAGTGGCCTTCCTTGC...CCTCGCTGTGTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CCACACCCTAGGAATGCTCTGCACACAGCCACAAATCCAGTAGCACACAGATCAGTGTCCAGTTGTATTTaGGAGGGGGCTGTCCTTCAC	+
Preference number: 4 (lower is better) Translates to: PHPRNALHTATNPVAHRSVSSCI*EGAVLH Trigger: GTGAAGGACAGCCCCCTCCCAAATACAACTGGACAC...TGATCTGTGTGCTACTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	GAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTCTTCACTCAGGCATTTaGGTGTGGCTCCTTCTCGGC	+
Preference number: 4 (lower is better) Translates to: EIYILRPQILGVHKSWAALHSGI*VWLLLG Trigger: GCCGAGAAGGAGCCACACTCAAATGCCTGAGTGAAG...AGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TACACGGCTGACCACCCCACACAGCTGCTGGAAGTTTCCAGTACAGTCAGATTAAAGAAAGCTCATTGCTaGCGTGACAGACGTAGACGC	+
Preference number: 4 (lower is better) Translates to: YTADHPTQLLEVSSTVRLKKAHC*RDRRRR Trigger: GCGTCTACGTCTGTCACGTCAGCAATGAGCTTTCTT...TAATCTGACTGTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
CDS-3UTR TCA 90 bp	TTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACACAGCGAGGAAGAAAGCTCATTGCTaGCGTGACAGACGTAGACGC	+
Preference number: 4 (lower is better) Translates to: LTTSPNAVKVQTTVDTARKKAHC*RDRRRR Trigger: GCGTCTACGTCTGTCACGTCAGCAATGAGCTTTCTT...CCTCGCTGTGTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACACTTCCACAGTGACCTaGGAATCCCTCGAAGAAAGC	+
Preference number: 4 (lower is better) Translates to: QESLTTSPNAVKVQTTVDTSTVT*ESLEES Trigger: GCTTTCTTCGAGGGATTCTCAGGTCACTGTGGAAGT...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACCAAGAACTTCCACAGTaGCCTGAGAATCCCTCGAAG	+
Preference number: 4 (lower is better) Translates to: QESLTTSPNAVKVQTTVDQELPQ*PENPSK Trigger: CTTCGAGGGATTCTCAGGTCACTGTGGAAGTTCTTG...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	AACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGCAGGGTCCCATTTTCCTaGACAAAATGGTTCATGGCC	+
Preference number: 4 (lower is better) Translates to: NLCIANTALGSEENPCLCRVPFS*TKWFMA Trigger: GGCCATGAACCATTTTGTGCAGGAAAATGGGACCCT...GCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CCACACCCTAGGAATGCTCTGCACACAGCCACAAATCCAGTAGCACACAGATCACATTCATACTTCGGCTaGGCACCAGATGGAACTCTG	+
Preference number: 4 (lower is better) Translates to: PHPRNALHTATNPVAHRSHSYFG*APDGTL Trigger: CAGAGTTCCATCTGGTGCCCAGCCGAAGTATGAATG...TGATCTGTGTGCTACTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	TTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACACAGCGAGGCATTCATACTTCGGCTaGGCACCAGATGGAACTCTG	+
Preference number: 4 (lower is better) Translates to: LTTSPNAVKVQTTVDTARHSYFG*APDGTL Trigger: CAGAGTTCCATCTGGTGCCCAGCCGAAGTATGAATG...CCTCGCTGTGTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CTTTCCAGAACCACAGGCACTAATCCCTGCCGTGGTCTGCTAGACAGTTTGGTTACTTGCCACAAGTTTTaGTCCTCAAGGCCCCTCACA	+
Preference number: 4 (lower is better) Translates to: LSRTTGTNPCRGLLDSLVTCHKF*SSRPLT Trigger: TGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGT...AACCAAACTGTCTAGCAGACCACGGCAGGGATTAGTGCCTGTGGTTCTGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GTGAAGGTACAAACCACTGTAGACACAGCGAGGACAAGATTCGAGGGGCCATGGTCCTCCTCATATTTCTaGGTCATCTGCTGGGCTTTG	+
Preference number: 4 (lower is better) Translates to: VKVQTTVDTARTRFEGPWSSSYF*VICWAL Trigger: CAAAGCCCAGCAGATGACCCAGAAATATGAGGAGGA...CCATGGCCCCTCGAATCTTGTCCTCGCTGTGTCTACAGTGGTTTGTACCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	GAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTTTGGCCTGTAAACGATaGCAGGAACAACAGCCGCAG	+
Preference number: 4 (lower is better) Translates to: EIYILRPQILGVHKSWAALACKR*QEQQPQ Trigger: CTGCGGCTGTTGTTCCTGGCATCGTTTACAGGCCAA...AGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	TACACGGCTGACCACCCCACACAGCTGCTGGAAGTTTCCAGTACAGTCAGATTAAGGGTCCCATTTTCCTaGACAAAATGGTTCATGGCC	+
Preference number: 4 (lower is better) Translates to: YTADHPTQLLEVSSTVRLRVPFS*TKWFMA Trigger: GGCCATGAACCATTTTGTGCAGGAAAATGGGACCCT...TAATCTGACTGTACTGGAAACTTCCAGCAGCTGTGTGGGGTGGTCAGCCGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
CDS-3UTR GCA 90 bp	CTTTCCAGAACCACAGGCACTAATCCCTGCCGTGGTCTGCTAGACAGTTTGGTTAGGGTCCCATTTTCCTaGACAAAATGGTTCATGGCC	+
Preference number: 4 (lower is better) Translates to: LSRTTGTNPCRGLLDSLVRVPFS*TKWFMA Trigger: GGCCATGAACCATTTTGTGCAGGAAAATGGGACCCT...AACCAAACTGTCTAGCAGACCACGGCAGGGATTAGTGCCTGTGGTTCTGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTGCAAGGAAGGCCACTTaGAGGGTGTGGGTGATTCTT	+
Preference number: 4 (lower is better) Translates to: EIYILRPQILGVHKSWAAARKAT*RVWVIL Trigger: AAGAATCACCCACACCCTCCAAGTGGCCTTCCTTGC...AGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACTCCTCCTCATATTTCTaGGTCATCTGCTGGGCTTTG	+
Preference number: 4 (lower is better) Translates to: QESLTTSPNAVKVQTTVDSSSYF*VICWAL Trigger: CAAAGCCCAGCAGATGACCCAGAAATATGAGGAGGA...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	AACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCTCCAGCTGTGCCCGCACATTTTCCTGCACAAAATaGTTCATGGCCTGTTTGATG	+
Preference number: 4 (lower is better) Translates to: NTAPPLWRSDSSSSCARTFSCTK*FMACLM Trigger: CATCAAACAGGCCATGAACCATTTTGTGCAGGAAAA...TGTGCGGGCACAGCTGGAGCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CATAGCACTTGTGACTTACCCAGTTCAAGGGGCAAGACAGGAATCAGACAAAAACTTCACTCAGGCATTTaGGTGTGGCTCCTTCTCGGC	+
Preference number: 4 (lower is better) Translates to: HSTCDLPSSRGKTGIRQKLHSGI*VWLLLG Trigger: GCCGAGAAGGAGCCACACTCAAATGCCTGAGTGAAG...TTTTTGTCTGATTCCTGTCTTGCCCCTTGAACTGGGTAAGTCACAAGTGCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
CDS-3UTR TCA 90 bp	GGTCAAAGTAGAGCAGTCAGTAGGGTGGGAAGTATCTTCCTAAAGAAATGCAGGTTGATGCCTTCATCCTaGTCGTCGTCCTCCTCTGTC	+
Preference number: 4 (lower is better) Translates to: GQSRAVSRVGSIFLKKCRLMPSS*SSSSSV Trigger: GACAGAGGAGGACGACGATCAGGATGAAGGCATCAA...CCTGCATTTCTTTAGGAAGATACTTCCCACCCTACTGACTGCTCTACTTTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCGCCAACGTCAGGCCCTaGCCCTCTTCTAGTGGTGGA	+
Preference number: 4 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTANVRP*PSSSGG Trigger: TCCACCACTAGAAGAGGGCCAGGGCCTGACGTTGGC...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GGGTCCATAAGTCCTGGGCTGCTTGGGAATGAAATGAGAGTTTCTCCTTTAGACACTTGCCACAAGTTTTaGTCCTCAAGGCCCCTCACA	+
Preference number: 4 (lower is better) Translates to: GSISPGLLGNEMRVSPLDTCHKF*SSRPLT Trigger: TGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGT...GTCTAAAGGAGAAACTCTCATTTCATTCCCAAGCAGCCCAGGACTTATGGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GGTCAAAGTAGAGCAGTCAGTAGGGTGGGAAGTATCTTCCTAAAGAAATGCAGGGTGTCCAGTTGTATTTaGGAGGGGGCTGTCCTTCAC	+
Preference number: 4 (lower is better) Translates to: GQSRAVSRVGSIFLKKCRVSSCI*EGAVLH Trigger: GTGAAGGACAGCCCCCTCCCAAATACAACTGGACAC...CCTGCATTTCTTTAGGAAGATACTTCCCACCCTACTGACTGCTCTACTTTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GGTCAAAGTAGAGCAGTCAGTAGGGTGGGAAGTATCTTCCTAAAGAAATGCAGGTCACTGTGGTTAACGTaGAGTAGCTGCGGCCTTCTG	+
Preference number: 4 (lower is better) Translates to: GQSRAVSRVGSIFLKKCRSLWLT*SSCGLL Trigger: CAGAAGGCCGCAGCTACTCCACGTTAACCACAGTGA...CCTGCATTTCTTTAGGAAGATACTTCCCACCCTACTGACTGCTCTACTTTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TTACATGAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGGCAGTTTTGCATCCTaGCCCAGCACCACTGTCACT	+
Preference number: 4 (lower is better) Translates to: LHEIYILRPQILGVHKSWGSFAS*PSTTVT Trigger: AGTGACAGTGGTGCTGGGTCAGGATGCAAAACTGCC...CCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTCATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCCTTGGAGGGTGTGGGTaGTTCTTCGGTCCTGGAGCA	+
Preference number: 4 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTLGGCG*FFGPGA Trigger: TGCTCCAGGACCGAAGAATCACCCACACCCTCCAAG...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCGAGAGTGCAGCCTCCTaGTGGAGTTCTCCCTGGTCA	+
Preference number: 4 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTESAAS*WSSPWS Trigger: TGACCAGGGAGAACTCCATCAGGAGGCTGCACTCTC...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	GGGTCCATAAGTCCTGGGCTGCTTGGGAATGAAATGAGAGTTTCTCCTTTAGACTCCTCCTCATATTTCTaGGTCATCTGCTGGGCTTTG	+
Preference number: 4 (lower is better) Translates to: GSISPGLLGNEMRVSPLDSSSYF*VICWAL Trigger: CAAAGCCCAGCAGATGACCCAGAAATATGAGGAGGA...GTCTAAAGGAGAAACTCTCATTTCATTCCCAAGCAGCCCAGGACTTATGGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CCA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCGTGCTCAGTAGTCAGTaGGGGAAAGCCCAGAGTGTC	+
Preference number: 4 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTVLSSQ*GKAQSV Trigger: GACACTCTGGGCTTTCCCCCACTGACTACTGAGCAC...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	TTACATGAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGACTTCCACAGTGACCTaGGAATCCCTCGAAGAAAGC	+
Preference number: 4 (lower is better) Translates to: LHEIYILRPQILGVHKSWTSTVT*ESLEES Trigger: GCTTTCTTCGAGGGATTCTCAGGTCACTGTGGAAGT...CCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTCATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR GCA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCTTGGCCTGTAAACGATaGCAGGAACAACAGCCGCAG	+
Preference number: 4 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTLACKR*QEQQPQ Trigger: CTGCGGCTGTTGTTCCTGGCATCGTTTACAGGCCAA...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR TCA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCAAGAAAGCTCATTGCTaGCGTGACAGACGTAGACGC	+
Preference number: 4 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTKKAHC*RDRRRR Trigger: GCGTCTACGTCTGTCACGTCAGCAATGAGCTTTCTT...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR CAA 72 bp	CTACCTGAGGGCTCTCAGAAATGGTTACAATGTCTTTaGAAAGCCACTTGCTCCTTTCTTAGCTGTATCTGG	+
Preference number: 4 (lower is better) Translates to: LPEGSQKWLQCL*KATCSFLSCIW Trigger: CCAGATACAGCTAAGAAAGGAGCAAGTGGCTTTCAAAAGACATTGTAACCATTTCTGAGAGCCCTCAGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
CDS-3UTR CCA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCTTTTCCTGCACAAAATaGTTCATGGCCTGTTTGATG	+
Preference number: 4 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTFSCTK*FMACLM Trigger: CATCAAACAGGCCATGAACCATTTTGTGCAGGAAAA...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
3UTR CAA 72 bp	TTGGATACTAAATCCCAGTATTCTGACTGCGTAAGTTaGGGCAGGCTAAAGAAAAACAAACATCTTACCCCA	+
Preference number: 4 (lower is better) Translates to: LDTKSQYSDCVS*GRLKKNKHLTP Trigger: TGGGGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTGGGATTTAGTATCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 90 bp	CCTCTGTGTCCCAGGTCACGCTGGGAGCTGGGCTGCCCTCAGCAGTaGAAGAGGCTGCCAACGTCAGGCCCTGGCCCTCTTCTAGTGGTG	+
Preference number: 5 (lower is better) Translates to: PLCPRSRWELGCPQQ*KRLPTSGPGPLLVV Trigger: CACCACTAGAAGAGGGCCAGGGCCTGACGTTGGCAGCCTCTTGCACTGCTGAGGGCAGCCCAGCTCCCAGCGTGACCTGGGACACAGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	GGCCACCAGAGGGCAGAGGGCTTCTGTAACAGTTCTGGCCTCTGGCAGACCCCCTCGTGGGGGCGGTGGTaGCTCCACGCGGTCCTCATA	+
Preference number: 5 (lower is better) Translates to: GHQRAEGFCNSSGLWQTPSWGRW*LHAVLI Trigger: TATGAGGACCGCGTGGAGCAACCACCGCCCCCACGA...GGGGGTCTGCCAGAGGCCAGAACTGTTACAGAAGCCCTCTGCCCTCTGGTGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	AAGAAGAGCCGAAGTTCCCCCATGGAAGCAGAAGAAGCCAGGCCTCGGGGAGGGTCGTGGGGGCGGTGGTaGCTCCACGCGGTCCTCATA	+
Preference number: 5 (lower is better) Translates to: KKSRSSPMEAEEARPRGGSWGRW*LHAVLI Trigger: TATGAGGACCGCGTGGAGCAACCACCGCCCCCACGA...CCCTCCCCGAGGCCTGGCTTCTTCTGCTTCCATGGGGGAACTTCGGCTCTTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 90 bp	GCTGGGCTGCCCTCAGCAGTGCAAGAGGCTGCCAACGTCAGGCCCTaGCCCTCTTCTAGTGGTGGACCAGGATTCAGTGAAGGCAGAGGA	+
Preference number: 5 (lower is better) Translates to: AGLPSAVQEAANVRP*PSSSGGPGFSEGRG Trigger: TCCTCTGCCTTCACTGAATCCTGGTCCACCACTAGAAGAGGGCCAGGGCCTGACGTTGGCAGCCTCTTGCACTGCTGAGGGCAGCCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 90 bp	ACTTGGAGGGTGTGGGTGATTCTTCGGTCCTGGAGCAGGCCAGGGTaGGACACCACGCAGGTCAGCGGCTGCCCATTCATACTTCGGCTG	+
Preference number: 5 (lower is better) Translates to: TWRVWVILRSWSRPG*DTTQVSGCPFILRL Trigger: CAGCCGAAGTATGAATGGGCAGCCGCTGACCTGCGTGGTGTCTCACCCTGGCCTGCTCCAGGACCGAAGAATCACCCACACCCTCCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 90 bp	GCTGGGAAGGTGCTGACTCTGCATTCGTACTCGCCCTCATCAGCTTaGACAGCGTTGCGCAGGAGGACCGAGCCGTCTAGAGGGTCTCGT	+
Preference number: 5 (lower is better) Translates to: AGKVLTLHSYSPSSA*TALRRRTEPSRGSR Trigger: ACGAGACCCTCTAGACGGCTCGGTCCTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGAGTACGAATGCAGAGTCAGCACCTTCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 90 bp	CACGAAGACGCATCCGTGCCTGAAAGCTGCCGGCTGGGAAGGTGCTaGCTCTGCATTCGTACTCGCCCTCATCAGCTTGCACAGCGTTGC	+
Preference number: 5 (lower is better) Translates to: HEDASVPESCRLGRC*LCIRTRPHQLAQRC Trigger: GCAACGCTGTGCAAGCTGATGAGGGCGAGTACGAATGCAGAGTCAGCACCTTCCCAGCCGGCAGCTTTCAGGCACGGATGCGTCTTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 90 bp	CAGGAGGCAGAACAGGAGAGCAGCGATCACGCCCACTATGATCACTaGGGCGGACACCAGGTCCACCTGCTTTCCTGGATCTTCGGGGTC	+
Preference number: 5 (lower is better) Translates to: QEAEQESSDHAHYDH*GGHQVHLLSWIFGV Trigger: GACCCCGAAGATCCAGGAAAGCAGGTGGACCTGGTGTCCGCCTCAGTGATCATAGTGGGCGTGATCGCTGCTCTCCTGTTCTGCCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 90 bp	GTCAGAGGTCTCCAGCTCACCCGCGGAATATTGGCCTGTAAACGATaGCAGGAACAACAGCCGCAGCCAGGCTTCAGGGCCCCACATCTC	+
Preference number: 5 (lower is better) Translates to: VRGLQLTRGILACKR*QEQQPQPGFRAPHL Trigger: GAGATGTGGGGCCCTGAAGCCTGGCTGCGGCTGTTGTTCCTGGCATCGTTTACAGGCCAATATTCCGCGGGTGAGCTGGAGACCTCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 90 bp	AGTGAAGGCAGAGGAGGCACCAGAACACGAAGACGCATCCGTGCCTaGAAGCTGCCGGCTGGGAAGGTGCTGACTCTGCATTCGTACTCG	+
Preference number: 5 (lower is better) Translates to: SEGRGGTRTRRRIRA*KLPAGKVLTLHSYS Trigger: CGAGTACGAATGCAGAGTCAGCACCTTCCCAGCCGGCAGCTTTCAGGCACGGATGCGTCTTCGTGTTCTGGTGCCTCCTCTGCCTTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 90 bp	GCTCCACGCGGTCCTCATAAGCAGGGTTCACATGAAGCCCGTATTTaGAGTGCAGTAGGGCCAGCTCCCGGATACCCTCGTTTGGGTCCA	+
Preference number: 5 (lower is better) Translates to: APRGPHKQGSHEARI*SAVGPAPGYPRLGP Trigger: TGGACCCAAACGAGGGTATCCGGGAGCTGGCCCTACTGCACTCCAAATACGGGCTTCATGTGAACCCTGCTTATGAGGACCGCGTGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 90 bp	AGGCACCAGAACACGAAGACGCATCCGTGCCTGAAAGCTGCCGGCTaGGAAGGTGCTGACTCTGCATTCGTACTCGCCCTCATCAGCTTG	+
Preference number: 5 (lower is better) Translates to: RHQNTKTHPCLKAAG*EGADSAFVLALISL Trigger: CAAGCTGATGAGGGCGAGTACGAATGCAGAGTCAGCACCTTCCCAGCCGGCAGCTTTCAGGCACGGATGCGTCTTCGTGTTCTGGTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 90 bp	ACGCAGGTCAGCGGCTGCCCATTCATACTTCGGCTGGGCACCAGATaGAACTCTGAAGTGACGGCAGCTGAGCGTGGGTGTGTGAAAGAG	+
Preference number: 5 (lower is better) Translates to: TQVSGCPFILRLGTR*NSEVTAAERGCVKE Trigger: CTCTTTCACACACCCACGCTCAGCTGCCGTCACTTCAGAGTTCCATCTGGTGCCCAGCCGAAGTATGAATGGGCAGCCGCTGACCTGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 90 bp	AGGCATTTGAGTGTGGCTCCTTCTCGGCCGACTTGCCACAAGTTTTaGTCCTCAAGGCCCCTCACAGAGGCCTCCGCAAGGAAGGCCACT	+
Preference number: 5 (lower is better) Translates to: RHLSVAPSRPTCHKF*SSRPLTEASARKAT Trigger: AGTGGCCTTCCTTGCGGAGGCCTCTGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTCGGCCGAGAAGGAGCCACACTCAAATGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	TCACCCACAACACCCCTTTCTCTTCACCTGAACTTCCACCTTCCCCGCGACCTACTCGCCCTCATCAGCTaGCACAGCGTTGCGCAGGAG	+
Preference number: 5 (lower is better) Translates to: SPTTPLSLHLNFHLPRDLLALIS*HSVAQE Trigger: CTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGAG...TAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	TTGCTCCCAAGGGGTGGGAACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCCTCGACTGTGTGCCCTaGACCTCTGTGTCCCAGGTC	+
Preference number: 5 (lower is better) Translates to: LLPRGGNTAPPLWRSDSSLDCVP*TSVSQV Trigger: GACCTGGGACACAGAGGTCAAGGGCACACAGTCGAG...GCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTTCCCACCCCTTGGGAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 90 bp	ATTTCTGGGTCATCTGCTGGGCTTTGCGGCGATGATATCGGGACATaGGCACCACCACCACCACCAGGAGGCAGAACAGGAGAGCAGCGA	+
Preference number: 5 (lower is better) Translates to: ISGSSAGLCGDDIGT*APPPPPGGRTGEQR Trigger: TCGCTGCTCTCCTGTTCTGCCTCCTGGTGGTGGTGGTGGTGCTCATGTCCCGATATCATCGCCGCAAAGCCCAGCAGATGACCCAGAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 90 bp	TGTCCTTCACTCAGGCATTTGAGTGTGGCTCCTTCTCGGCCGACTTaGCACAAGTTTTGGTCCTCAAGGCCCCTCACAGAGGCCTCCGCA	+
Preference number: 5 (lower is better) Translates to: CPSLRHLSVAPSRPT*HKFWSSRPLTEASA Trigger: TGCGGAGGCCTCTGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTCGGCCGAGAAGGAGCCACACTCAAATGCCTGAGTGAAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 90 bp	TCACTCATCACAGAGCAGCTACTGTTGTCCTTGAGACTATCAGGGTaGCCCTCCGCTCTCAGCCCTACACTCTCCTCCGGCTGGCTCCTA	+
Preference number: 5 (lower is better) Translates to: SLITEQLLLSLRLSG*PSALSPTLSSGWLL Trigger: TAGGAGCCAGCCGGAGGAGAGTGTAGGGCTGAGAGCGGAGGGCCACCCTGATAGTCTCAAGGACAACAGTAGCTGCTCTGTGATGAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGACTCGACTGTGTGCCCTaGACCTCTGTGTCCCAGGTC	+
Preference number: 5 (lower is better) Translates to: PLPRTSVGEGILGRELSRLDCVP*TSVSQV Trigger: GACCTGGGACACAGAGGTCAAGGGCACACAGTCGAG...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 90 bp	AGCTCCTCCTCATATTTCTGGGTCATCTGCTGGGCTTTGCGGCGATaGTATCGGGACATGAGCACCACCACCACCACCAGGAGGCAGAAC	+
Preference number: 5 (lower is better) Translates to: SSSSYFWVICWALRR*YRDMSTTTTTRRQN Trigger: GTTCTGCCTCCTGGTGGTGGTGGTGGTGCTCATGTCCCGATATCATCGCCGCAAAGCCCAGCAGATGACCCAGAAATATGAGGAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 90 bp	GGCCTTCTGGCTCTTCACTCATCACAGAGCAGCTACTGTTGTCCTTaGGACTATCAGGGTGGCCCTCCGCTCTCAGCCCTACACTCTCCT	+
Preference number: 5 (lower is better) Translates to: GLLALHSSQSSYCCP*DYQGGPPLSALHSP Trigger: AGGAGAGTGTAGGGCTGAGAGCGGAGGGCCACCCTGATAGTCTCAAGGACAACAGTAGCTGCTCTGTGATGAGTGAAGAGCCAGAAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS CCA 90 bp	ACCACTGTCACTACGTCAGAGGTCTCCAGCTCACCCGCGGAATATTaGCCTGTAAACGATGCCAGGAACAACAGCCGCAGCCAGGCTTCA	+
Preference number: 5 (lower is better) Translates to: TTVTTSEVSSSPAEY*PVNDARNNSRSQAS Trigger: TGAAGCCTGGCTGCGGCTGTTGTTCCTGGCATCGTTTACAGGCCAATATTCCGCGGGTGAGCTGGAGACCTCTGACGTAGTGACAGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CCCTGCCTCTGCAGGCAGAGGTCACACATAAGGCACTCTACTCACACACCACACGACTTGCCACAAGTTTaGGTCCTCAAGGCCCCTCAC	+
Preference number: 5 (lower is better) Translates to: PCLCRQRSHIRHSTHTPHDLPQV*VLKAPH Trigger: GTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTC...GTGTGGTGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAGGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	AACACAGCTCCCCCACTTTGGAGGTCAGATTCTAGCTCCAGCTGTGCCCGCACATCCAACCGTGTCCAGTaGTATTTGGGAGGGGGCTGT	+
Preference number: 5 (lower is better) Translates to: NTAPPLWRSDSSSSCARTSNRVQ*YLGGGC Trigger: ACAGCCCCCTCCCAAATACAACTGGACACGGTTGGA...TGTGCGGGCACAGCTGGAGCTAGAATCTGACCTCCAAAGTGGGGGAGCTGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CCCTGCCTCTGCAGGCAGAGGTCACACATAAGGCACTCTACTCACACACCACACCAGCTACTGTTGTCCTaGAGACTATCAGGGTGGCCC	+
Preference number: 5 (lower is better) Translates to: PCLCRQRSHIRHSTHTPHQLLLS*RLSGWP Trigger: GGGCCACCCTGATAGTCTCAAGGACAACAGTAGCTG...GTGTGGTGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAGGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS CCA 90 bp	ATTGCTGACGTGACAGACGTAGACGCCACTGTGCTCAGTAGTCAGTaGGGGAAAGCCCAGAGTGTCTCCTTTCACTCGTACCCCACTAGG	+
Preference number: 5 (lower is better) Translates to: IADVTDVDATVLSSQ*GKAQSVSFHSYPTR Trigger: CCTAGTGGGGTACGAGTGAAAGGAGACACTCTGGGCTTTCCCCCACTGACTACTGAGCACAGTGGCGTCTACGTCTGTCACGTCAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CTAACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTCTCGACTGTGTGCCCTaGACCTCTGTGTCCCAGGTC	+
Preference number: 5 (lower is better) Translates to: LTSASLILLWGLRKIPASLDCVP*TSVSQV Trigger: GACCTGGGACACAGAGGTCAAGGGCACACAGTCGAG...AGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	TGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGCAGGCAGGACTTGCCACAAGTTTaGGTCCTCAAGGCCCCTCAC	+
Preference number: 5 (lower is better) Translates to: CIANTALGSEENPCLCRQDLPQV*VLKAPH Trigger: GTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTC...CTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGAGACTTGCCACAAGTTTaGGTCCTCAAGGCCCCTCAC	+
Preference number: 5 (lower is better) Translates to: PLPRTSVGEGILGRELSRDLPQV*VLKAPH Trigger: GTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTC...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGACCTTCACTCAGGCATTaGAGTGTGGCTCCTTCTCGG	+
Preference number: 5 (lower is better) Translates to: PLPRTSVGEGILGRELSRPSLRH*SVAPSR Trigger: CCGAGAAGGAGCCACACTCAAATGCCTGAGTGAAGG...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	TGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGCAGGCAGCGTGTCCAGTTGTATTaGGGAGGGGGCTGTCCTTCA	+
Preference number: 5 (lower is better) Translates to: CIANTALGSEENPCLCRQRVQLY*GGGCPS Trigger: TGAAGGACAGCCCCCTCCCAAATACAACTGGACACG...CTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	TCACCCACAACACCCCTTTCTCTTCACCTGAACTTCCACCTTCCCCGCGACCTACGTGTCCAGTTGTATTaGGGAGGGGGCTGTCCTTCA	+
Preference number: 5 (lower is better) Translates to: SPTTPLSLHLNFHLPRDLRVQLY*GGGCPS Trigger: TGAAGGACAGCCCCCTCCCAAATACAACTGGACACG...TAGGTCGCGGGGAAGGTGGAAGTTCAGGTGAAGAGAAAGGGGTGTTGTGGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CCCCTCCCCAGAACCTCTGTGGGTGAAGGCATCCTAGGAAGAGAACTTTCCAGACCATTGCCTGTAGGTTaGGCCCTCAGGGTCCCATTT	+
Preference number: 5 (lower is better) Translates to: PLPRTSVGEGILGRELSRPLPVG*ALRVPF Trigger: AAATGGGACCCTGAGGGCCAAACCTACAGGCAATGG...TCTGGAAAGTTCTCTTCCTAGGATGCCTTCACCCACAGAGGTTCTGGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	TGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGCAGGCAGCCATTGCCTGTAGGTTaGGCCCTCAGGGTCCCATTT	+
Preference number: 5 (lower is better) Translates to: CIANTALGSEENPCLCRQPLPVG*ALRVPF Trigger: AAATGGGACCCTGAGGGCCAAACCTACAGGCAATGG...CTGCCTGCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 90 bp	CCCTCAGGGTCCCATTTTCCTGCACAAAATGGTTCATGGCCTGTTTaGTGCCTTCATCCTGATCGTCGTCCTCCTCTGTCCTCCCAGAGC	+
Preference number: 5 (lower is better) Translates to: PSGSHFPAQNGSWPV*CLHPDRRPPLSSQS Trigger: GCTCTGGGAGGACAGAGGAGGACGACGATCAGGATGAAGGCATCAAACAGGCCATGAACCATTTTGTGCAGGAAAATGGGACCCTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	GAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTCTCGCCCTCATCAGCTaGCACAGCGTTGCGCAGGAG	+
Preference number: 5 (lower is better) Translates to: EIYILRPQILGVHKSWAALALIS*HSVAQE Trigger: CTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGAG...AGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	AACCTCTGCATCGCTAATACTGCTCTGGGGTCTGAGGAAAATCCCTGCCTCTGCTCCAACCGTGTCCAGTaGTATTTGGGAGGGGGCTGT	+
Preference number: 5 (lower is better) Translates to: NLCIANTALGSEENPCLCSNRVQ*YLGGGC Trigger: ACAGCCCCCTCCCAAATACAACTGGACACGGTTGGA...GCAGAGGCAGGGATTTTCCTCAGACCCCAGAGCAGTATTAGCGATGCAGAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CCCTGCCTCTGCAGGCAGAGGTCACACATAAGGCACTCTACTCACACACCACACACAGAGCAGCTACTGTaGTCCTTGAGACTATCAGGG	+
Preference number: 5 (lower is better) Translates to: PCLCRQRSHIRHSTHTPHTEQLL*SLRLSG Trigger: CCCTGATAGTCTCAAGGACAACAGTAGCTGCTCTGT...GTGTGGTGTGTGAGTAGAGTGCCTTATGTGTGACCTCTGCCTGCAGAGGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACAGAAGCAGGGCAGTTTaGCATCCTGACCCAGCACCA	+
Preference number: 5 (lower is better) Translates to: QESLTTSPNAVKVQTTVDRSRAV*HPDPAP Trigger: TGGTGCTGGGTCAGGATGCAAAACTGCCCTGCTTCT...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CAGGAGTCCTTGACAACAAGTCCCAACGCCGTGAAGGTACAAACCACTGTAGACCCTTCACTCAGGCATTaGAGTGTGGCTCCTTCTCGG	+
Preference number: 5 (lower is better) Translates to: QESLTTSPNAVKVQTTVDPSLRH*SVAPSR Trigger: CCGAGAAGGAGCCACACTCAAATGCCTGAGTGAAGG...GTCTACAGTGGTTTGTACCTTCACGGCGTTGGGACTTGTTGTCAAGGACTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CCACACCCTAGGAATGCTCTGCACACAGCCACAAATCCAGTAGCACACAGATCACCTTCACTCAGGCATTaGAGTGTGGCTCCTTCTCGG	+
Preference number: 5 (lower is better) Translates to: PHPRNALHTATNPVAHRSPSLRH*SVAPSR Trigger: CCGAGAAGGAGCCACACTCAAATGCCTGAGTGAAGG...TGATCTGTGTGCTACTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CCACACCCTAGGAATGCTCTGCACACAGCCACAAATCCAGTAGCACACAGATCATCCAACCGTGTCCAGTaGTATTTGGGAGGGGGCTGT	+
Preference number: 5 (lower is better) Translates to: PHPRNALHTATNPVAHRSSNRVQ*YLGGGC Trigger: ACAGCCCCCTCCCAAATACAACTGGACACGGTTGGA...TGATCTGTGTGCTACTGGATTTGTGGCTGTGTGCAGAGCATTCCTAGGGTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 90 bp	TTTTCCTGCACAAAATGGTTCATGGCCTGTTTGATGCCTTCATCCTaGTCGTCGTCCTCCTCTGTCCTCCCAGAGCCTGGAGATAGCAGT	+
Preference number: 5 (lower is better) Translates to: FSCTKWFMACLMPSS*SSSSSVLPEPGDSS Trigger: ACTGCTATCTCCAGGCTCTGGGAGGACAGAGGAGGACGACGATCAGGATGAAGGCATCAAACAGGCCATGAACCATTTTGTGCAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	GAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTAGAAGCAGGGCAGTTTaGCATCCTGACCCAGCACCA	+
Preference number: 5 (lower is better) Translates to: EIYILRPQILGVHKSWAARSRAV*HPDPAP Trigger: TGGTGCTGGGTCAGGATGCAAAACTGCCCTGCTTCT...AGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	GAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGGCTGCTCGTGTCCAGTTGTATTaGGGAGGGGGCTGTCCTTCA	+
Preference number: 5 (lower is better) Translates to: EIYILRPQILGVHKSWAARVQLY*GGGCPS Trigger: TGAAGGACAGCCCCCTCCCAAATACAACTGGACACG...AGCAGCCCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCCTCGCCCTCATCAGCTaGCACAGCGTTGCGCAGGAG	+
Preference number: 5 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTLALIS*HSVAQE Trigger: CTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGAG...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CACATAGAGACTCAGTCCATAGCACTTGTGACTTACCCAGTTCAAGGGGCAAGAACAGAGCAGCTACTGTaGTCCTTGAGACTATCAGGG	+
Preference number: 5 (lower is better) Translates to: HIETQSIALVTYPVQGARTEQLL*SLRLSG Trigger: CCCTGATAGTCTCAAGGACAACAGTAGCTGCTCTGT...TCTTGCCCCTTGAACTGGGTAAGTCACAAGTGCTATGGACTGAGTCTCTATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006578.10
CDS-3UTR CAA 90 bp	TTACATGAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGAGAAGCAGGGCAGTTTaGCATCCTGACCCAGCACCA	+
Preference number: 5 (lower is better) Translates to: LHEIYILRPQILGVHKSWRSRAV*HPDPAP Trigger: TGGTGCTGGGTCAGGATGCAAAACTGCCCTGCTTCT...CCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTCATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	TTACATGAAATATACATACTAAGACCCCAGATCCTTGGGGTCCATAAGTCCTGGCCATTGCCTGTAGGTTaGGCCCTCAGGGTCCCATTT	+
Preference number: 5 (lower is better) Translates to: LHEIYILRPQILGVHKSWPLPVG*ALRVPF Trigger: AAATGGGACCCTGAGGGCCAAACCTACAGGCAATGG...CCAGGACTTATGGACCCCAAGGATCTGGGGTCTTAGTATGTATATTTCATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS-3UTR CAA 90 bp	CAGTATTCTGACTGCGTAAGTTTGGGCAGGCTAAAGAAAAACAAACATCTTACCCAGCTACTGTTGTCCTaGAGACTATCAGGGTGGCCC	+
Preference number: 5 (lower is better) Translates to: QYSDCVSLGRLKKNKHLTQLLLS*RLSGWP Trigger: GGGCCACCCTGATAGTCTCAAGGACAACAGTAGCTG...GGTAAGATGTTTGTTTTTCTTTAGCCTGCCCAAACTTACGCAGTCAGAATACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS GCA 72 bp	CCCAGGTCACGCTGGGAGCTGGGCTGCCCTCAGCAGTaGAAGAGGCTGCCAACGTCAGGCCCTGGCCCTCTT	+
Preference number: 6 (lower is better) Translates to: PRSRWELGCPQQ*KRLPTSGPGPL Trigger: AAGAGGGCCAGGGCCTGACGTTGGCAGCCTCTTGCACTGCTGAGGGCAGCCCAGCTCCCAGCGTGACCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 72 bp	TGGAGTGCAGTAGGGCCAGCTCCCGGATACCCTCGTTaGGGTCCACTCGAGCCCATGCCACCTGCCCCACCT	+
Preference number: 6 (lower is better) Translates to: WSAVGPAPGYPR*GPLEPMPPAPP Trigger: AGGTGGGGCAGGTGGCATGGGCTCGAGTGGACCCAAACGAGGGTATCCGGGAGCTGGCCCTACTGCACTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 90 bp	GCCCGTATTTGGAGTGCAGTAGGGCCAGCTCCCGGATACCCTCGTTaGGGTCCACTCGAGCCCATGCCACCTGCCCCACCTGCTCATCCG	+
Preference number: 6 (lower is better) Translates to: ARIWSAVGPAPGYPR*GPLEPMPPAPPAHP Trigger: CGGATGAGCAGGTGGGGCAGGTGGCATGGGCTCGAGTGGACCCAAACGAGGGTATCCGGGAGCTGGCCCTACTGCACTCCAAATACGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 72 bp	CGTGGGTGTGTGAAAGAGCGGCTCGACTGTGTGCCCTaGACCTCTGTGTCCCAGGTCACGCTGGGAGCTGGG	+
Preference number: 6 (lower is better) Translates to: RGCVKERLDCVP*TSVSQVTLGAG Trigger: CCCAGCTCCCAGCGTGACCTGGGACACAGAGGTCAAGGGCACACAGTCGAGCCGCTCTTTCACACACCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 90 bp	GTGCTGACTCTGCATTCGTACTCGCCCTCATCAGCTTGCACAGCGTaGCGCAGGAGGACCGAGCCGTCTAGAGGGTCTCGTGGGGGCGGT	+
Preference number: 6 (lower is better) Translates to: VLTLHSYSPSSACTA*RRRTEPSRGSRGGG Trigger: ACCGCCCCCACGAGACCCTCTAGACGGCTCGGTCCTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGAGTACGAATGCAGAGTCAGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 72 bp	ACACTCTCCTCCGGCTGGCTCCTAGGGTCCGAGTGGTaGGAGTGCAGCCTCCTGATGGAGTTCTCCCTGGTC	+
Preference number: 6 (lower is better) Translates to: TLSSGWLLGSEW*ECSLLMEFSLV Trigger: GACCAGGGAGAACTCCATCAGGAGGCTGCACTCTCACCACTCGGACCCTAGGAGCCAGCCGGAGGAGAGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS TCA 72 bp	GTGTGGGTGATTCTTCGGTCCTGGAGCAGGCCAGGGTaGGACACCACGCAGGTCAGCGGCTGCCCATTCATA	+
Preference number: 6 (lower is better) Translates to: VWVILRSWSRPG*DTTQVSGCPFI Trigger: TATGAATGGGCAGCCGCTGACCTGCGTGGTGTCTCACCCTGGCCTGCTCCAGGACCGAAGAATCACCCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 72 bp	CTCCAGCTCACCCGCGGAATATTGGCCTGTAAACGATaGCAGGAACAACAGCCGCAGCCAGGCTTCAGGGCC	+
Preference number: 6 (lower is better) Translates to: LQLTRGILACKR*QEQQPQPGFRA Trigger: GGCCCTGAAGCCTGGCTGCGGCTGTTGTTCCTGGCATCGTTTACAGGCCAATATTCCGCGGGTGAGCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 72 bp	TGCATTCGTACTCGCCCTCATCAGCTTGCACAGCGTTaGGCAGGAGGACCGAGCCGTCTAGAGGGTCTCGTG	+
Preference number: 6 (lower is better) Translates to: CIRTRPHQLAQR*AGGPSRLEGLV Trigger: CACGAGACCCTCTAGACGGCTCGGTCCTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGAGTACGAATGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 72 bp	AGGCAGAGGAGGCACCAGAACACGAAGACGCATCCGTaGCTGAAAGCTGCCGGCTGGGAAGGTGCTGACTCT	+
Preference number: 6 (lower is better) Translates to: RQRRHQNTKTHP*LKAAGWEGADS Trigger: AGAGTCAGCACCTTCCCAGCCGGCAGCTTTCAGGCACGGATGCGTCTTCGTGTTCTGGTGCCTCCTCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 72 bp	AGTGTGGCTCCTTCTCGGCCGACTTGCCACAAGTTTTaGTCCTCAAGGCCCCTCACAGAGGCCTCCGCAAGG	+
Preference number: 6 (lower is better) Translates to: SVAPSRPTCHKF*SSRPLTEASAR Trigger: CCTTGCGGAGGCCTCTGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTCGGCCGAGAAGGAGCCACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 72 bp	CTGCATTCGTACTCGCCCTCATCAGCTTGCACAGCGTaGCGCAGGAGGACCGAGCCGTCTAGAGGGTCTCGT	+
Preference number: 6 (lower is better) Translates to: LHSYSPSSACTA*RRRTEPSRGSR Trigger: ACGAGACCCTCTAGACGGCTCGGTCCTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGAGTACGAATGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 72 bp	GAGTGTGGCTCCTTCTCGGCCGACTTGCCACAAGTTTaGGTCCTCAAGGCCCCTCACAGAGGCCTCCGCAAG	+
Preference number: 6 (lower is better) Translates to: ECGSFSADLPQV*VLKAPHRGLRK Trigger: CTTGCGGAGGCCTCTGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTCGGCCGAGAAGGAGCCACACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 90 bp	GCCCCACCTGCTCATCCGGATCCCCTCGGTAGAAGCAGGGCAGTTTaGCATCCTGACCCAGCACCACTGTCACTACGTCAGAGGTCTCCA	+
Preference number: 6 (lower is better) Translates to: APPAHPDPLGRSRAV*HPDPAPLSLRQRSP Trigger: TGGAGACCTCTGACGTAGTGACAGTGGTGCTGGGTCAGGATGCAAAACTGCCCTGCTTCTACCGAGGGGATCCGGATGAGCAGGTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 90 bp	CAGGCATTTGAGTGTGGCTCCTTCTCGGCCGACTTGCCACAAGTTTaGGTCCTCAAGGCCCCTCACAGAGGCCTCCGCAAGGAAGGCCAC	+
Preference number: 6 (lower is better) Translates to: QAFECGSFSADLPQV*VLKAPHRGLRKEGH Trigger: GTGGCCTTCCTTGCGGAGGCCTCTGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTCGGCCGAGAAGGAGCCACACTCAAATGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 72 bp	GCATCCGTGCCTGAAAGCTGCCGGCTGGGAAGGTGCTaGCTCTGCATTCGTACTCGCCCTCATCAGCTTGCA	+
Preference number: 6 (lower is better) Translates to: ASVPESCRLGRC*LCIRTRPHQLA Trigger: TGCAAGCTGATGAGGGCGAGTACGAATGCAGAGTCAGCACCTTCCCAGCCGGCAGCTTTCAGGCACGGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 72 bp	GGAGGCAGAACAGGAGAGCAGCGATCACGCCCACTATaGTCACTGAGGCGGACACCAGGTCCACCTGCTTTC	+
Preference number: 6 (lower is better) Translates to: GGRTGEQRSRPL*SLRRTPGPPAF Trigger: GAAAGCAGGTGGACCTGGTGTCCGCCTCAGTGATCATAGTGGGCGTGATCGCTGCTCTCCTGTTCTGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 72 bp	TCTGGCTCTTCACTCTGGCTCCTAGGGTCCGAGTGGTaGGAGTGCAGCCTCCTGATGGAGTTCTCCCTGGTC	+
Preference number: 6 (lower is better) Translates to: SGSSLWLLGSEW*ECSLLMEFSLV Trigger: GACCAGGGAGAACTCCATCAGGAGGCTGCACTCTCACCACTCGGACCCTAGGAGCCAGAGTGAAGAGCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094325.5
CDS GCA 72 bp	GTGCTGACTCTGCATTCGTACTCGCCCTCATCAGCTTaGACAGCGTTGCGCAGGAGGACCGAGCCGTCTAGA	+
Preference number: 6 (lower is better) Translates to: VLTLHSYSPSSA*TALRRRTEPSR Trigger: TCTAGACGGCTCGGTCCTCCTGCGCAACGCTGTGCAAGCTGATGAGGGCGAGTACGAATGCAGAGTCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 72 bp	AACACGAAGACGCATCCGTGCCTGAAAGCTGCCGGCTaGGAAGGTGCTGACTCTGCATTCGTACTCGCCCTC	+
Preference number: 6 (lower is better) Translates to: NTKTHPCLKAAG*EGADSAFVLAL Trigger: GAGGGCGAGTACGAATGCAGAGTCAGCACCTTCCCAGCCGGCAGCTTTCAGGCACGGATGCGTCTTCGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 72 bp	CCCTCAGCAGTGCAAGAGGCTGCCAACGTCAGGCCCTaGCCCTCTTCTAGTGGTGGACCAGGATTCAGTGAA	+
Preference number: 6 (lower is better) Translates to: PSAVQEAANVRP*PSSSGGPGFSE Trigger: TTCACTGAATCCTGGTCCACCACTAGAAGAGGGCCAGGGCCTGACGTTGGCAGCCTCTTGCACTGCTGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 72 bp	AGCGGCTGCCCATTCATACTTCGGCTGGGCACCAGATaGAACTCTGAAGTGACGGCAGCTGAGCGTGGGTGT	+
Preference number: 6 (lower is better) Translates to: SGCPFILRLGTR*NSEVTAAERGC Trigger: ACACCCACGCTCAGCTGCCGTCACTTCAGAGTTCCATCTGGTGCCCAGCCGAAGTATGAATGGGCAGCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 72 bp	ACAGAGCAGCTACTGTTGTCCTTGAGACTATCAGGGTaGCCCTCCGCTCTCAGCCCTACACTCTCCTCCGGC	+
Preference number: 6 (lower is better) Translates to: TEQLLLSLRLSG*PSALSPTLSSG Trigger: GCCGGAGGAGAGTGTAGGGCTGAGAGCGGAGGGCCACCCTGATAGTCTCAAGGACAACAGTAGCTGCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS CAA 90 bp	CTGTCCTTCACTCAGGCATTTGAGTGTGGCTCCTTCTCGGCCGACTaGCCACAAGTTTTGGTCCTCAAGGCCCCTCACAGAGGCCTCCGC	+
Preference number: 6 (lower is better) Translates to: LSFTQAFECGSFSAD*PQVLVLKAPHRGLR Trigger: GCGGAGGCCTCTGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTCGGCCGAGAAGGAGCCACACTCAAATGCCTGAGTGAAGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 90 bp	CACCACTGTCACTACGTCAGAGGTCTCCAGCTCACCCGCGGAATATaGGCCTGTAAACGATGCCAGGAACAACAGCCGCAGCCAGGCTTC	+
Preference number: 6 (lower is better) Translates to: HHCHYVRGLQLTRGI*ACKRCQEQQPQPGF Trigger: GAAGCCTGGCTGCGGCTGTTGTTCCTGGCATCGTTTACAGGCCAATATTCCGCGGGTGAGCTGGAGACCTCTGACGTAGTGACAGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 90 bp	CGGCCTTCTGGCTCTTCACTCATCACAGAGCAGCTACTGTTGTCCTaGAGACTATCAGGGTGGCCCTCCGCTCTCAGCCCTACACTCTCC	+
Preference number: 6 (lower is better) Translates to: RPSGSSLITEQLLLS*RLSGWPSALSPTLS Trigger: GGAGAGTGTAGGGCTGAGAGCGGAGGGCCACCCTGATAGTCTCAAGGACAACAGTAGCTGCTCTGTGATGAGTGAAGAGCCAGAAGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS TCA 72 bp	TCATCTGCTGGGCTTTGCGGCGATGATATCGGGACATaGGCACCACCACCACCACCAGGAGGCAGAACAGGA	+
Preference number: 6 (lower is better) Translates to: SSAGLCGDDIGT*APPPPPGGRTG Trigger: TCCTGTTCTGCCTCCTGGTGGTGGTGGTGGTGCTCATGTCCCGATATCATCGCCGCAAAGCCCAGCAGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 72 bp	CTCATCCGGATCCCCTCGGTAGAAGCAGGGCAGTTTTaGATCCTGACCCAGCACCACTGTCACTACGTCAGA	+
Preference number: 6 (lower is better) Translates to: LIRIPSVEAGQF*ILTQHHCHYVR Trigger: TCTGACGTAGTGACAGTGGTGCTGGGTCAGGATGCAAAACTGCCCTGCTTCTACCGAGGGGATCCGGATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 72 bp	CTCAGGCATTTGAGTGTGGCTCCTTCTCGGCCGACTTaGCACAAGTTTTGGTCCTCAAGGCCCCTCACAGAG	+
Preference number: 6 (lower is better) Translates to: LRHLSVAPSRPT*HKFWSSRPLTE Trigger: CTCTGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTCGGCCGAGAAGGAGCCACACTCAAATGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 72 bp	ACTACGTCAGAGGTCTCCAGCTCACCCGCGGAATATTaGCCTGTAAACGATGCCAGGAACAACAGCCGCAGC	+
Preference number: 6 (lower is better) Translates to: TTSEVSSSPAEY*PVNDARNNSRS Trigger: GCTGCGGCTGTTGTTCCTGGCATCGTTTACAGGCCAATATTCCGCGGGTGAGCTGGAGACCTCTGACGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CCA 72 bp	GGTCCTCATAAGCAGGGTTCACATGAAGCCCGTATTTaGAGTGCAGTAGGGCCAGCTCCCGGATACCCTCGT	+
Preference number: 6 (lower is better) Translates to: GPHKQGSHEARI*SAVGPAPGYPR Trigger: ACGAGGGTATCCGGGAGCTGGCCCTACTGCACTCCAAATACGGGCTTCATGTGAACCCTGCTTATGAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 72 bp	CACTACGTCAGAGGTCTCCAGCTCACCCGCGGAATATaGGCCTGTAAACGATGCCAGGAACAACAGCCGCAG	+
Preference number: 6 (lower is better) Translates to: HYVRGLQLTRGI*ACKRCQEQQPQ Trigger: CTGCGGCTGTTGTTCCTGGCATCGTTTACAGGCCAATATTCCGCGGGTGAGCTGGAGACCTCTGACGTAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 72 bp	ACCCCACTAGGCAGAGGTCCATCCAACCGTGTCCAGTaGTATTTGGGAGGGGGCTGTCCTTCACTCAGGCAT	+
Preference number: 6 (lower is better) Translates to: TPLGRGPSNRVQ*YLGGGCPSLRH Trigger: ATGCCTGAGTGAAGGACAGCCCCCTCCCAAATACAACTGGACACGGTTGGATGGACCTCTGCCTAGTGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 90 bp	CGTGTCCAGTTGTATTTGGGAGGGGGCTGTCCTTCACTCAGGCATTaGAGTGTGGCTCCTTCTCGGCCGACTTGCCACAAGTTTTGGTCC	+
Preference number: 6 (lower is better) Translates to: RVQLYLGGGCPSLRH*SVAPSRPTCHKFWS Trigger: GGACCAAAACTTGTGGCAAGTCGGCCGAGAAGGAGCCACACTCAAATGCCTGAGTGAAGGACAGCCCCCTCCCAAATACAACTGGACACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 72 bp	TCATATTTCTGGGTCATCTGCTGGGCTTTGCGGCGATaGTATCGGGACATGAGCACCACCACCACCACCAGG	+
Preference number: 6 (lower is better) Translates to: SYFWVICWALRR*YRDMSTTTTTR Trigger: CCTGGTGGTGGTGGTGGTGCTCATGTCCCGATATCATCGCCGCAAAGCCCAGCAGATGACCCAGAAATATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 72 bp	GCTCTTCACTCATCACAGAGCAGCTACTGTTGTCCTTaGGACTATCAGGGTGGCCCTCCGCTCTCAGCCCTA	+
Preference number: 6 (lower is better) Translates to: ALHSSQSSYCCP*DYQGGPPLSAL Trigger: TAGGGCTGAGAGCGGAGGGCCACCCTGATAGTCTCAAGGACAACAGTAGCTGCTCTGTGATGAGTGAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS CAA 72 bp	ACTCAGGCATTTGAGTGTGGCTCCTTCTCGGCCGACTaGCCACAAGTTTTGGTCCTCAAGGCCCCTCACAGA	+
Preference number: 6 (lower is better) Translates to: TQAFECGSFSAD*PQVLVLKAPHR Trigger: TCTGTGAGGGGCCTTGAGGACCAAAACTTGTGGCAAGTCGGCCGAGAAGGAGCCACACTCAAATGCCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 72 bp	TTGTATTTGGGAGGGGGCTGTCCTTCACTCAGGCATTaGAGTGTGGCTCCTTCTCGGCCGACTTGCCACAAG	+
Preference number: 6 (lower is better) Translates to: LYLGGGCPSLRH*SVAPSRPTCHK Trigger: CTTGTGGCAAGTCGGCCGAGAAGGAGCCACACTCAAATGCCTGAGTGAAGGACAGCCCCCTCCCAAATACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS CAA 72 bp	CCTTCTGGCTCTTCACTCATCACAGAGCAGCTACTGTaGTCCTTGAGACTATCAGGGTGGCCCTCCGCTCTC	+
Preference number: 6 (lower is better) Translates to: PSGSSLITEQLL*SLRLSGWPSAL Trigger: GAGAGCGGAGGGCCACCCTGATAGTCTCAAGGACAACAGTAGCTGCTCTGTGATGAGTGAAGAGCCAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS GCA 72 bp	TCTCGATCTCTCTCACTGTGGTTAACGTGGAGTAGCTaGGGCCTTCTGGCTCTTCACTCATCACAGAGCAGC	+
Preference number: 6 (lower is better) Translates to: SRSLSLWLTWSS*GLLALHSSQSS Trigger: GCTGCTCTGTGATGAGTGAAGAGCCAGAAGGCCGCAGCTACTCCACGTTAACCACAGTGAGAGAGATCGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006578.10 ENSMUST00000111286.9
CDS CAA 72 bp	CTAGGCAGAGGTCCATCCAACCGTGTCCAGTTGTATTaGGGAGGGGGCTGTCCTTCACTCAGGCATTTGAGT	+
Preference number: 6 (lower is better) Translates to: LGRGPSNRVQLY*GGGCPSLRHLS Trigger: ACTCAAATGCCTGAGTGAAGGACAGCCCCCTCCCAAATACAACTGGACACGGTTGGATGGACCTCTGCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS TCA 72 bp	ACAAAATGGTTCATGGCCTGTTTGATGCCTTCATCCTaGTCGTCGTCCTCCTCTGTCCTCCCAGAGCCTGGA	+
Preference number: 6 (lower is better) Translates to: TKWFMACLMPSS*SSSSSVLPEPG Trigger: TCCAGGCTCTGGGAGGACAGAGGAGGACGACGATCAGGATGAAGGCATCAAACAGGCCATGAACCATTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9
CDS GCA 72 bp	TTGCCTGTAGGTTTGGCCCTCAGGGTCCCATTTTCCTaGACAAAATGGTTCATGGCCTGTTTGATGCCTTCA	+
Preference number: 6 (lower is better) Translates to: LPVGLALRVPFS*TKWFMACLMPS Trigger: TGAAGGCATCAAACAGGCCATGAACCATTTTGTGCAGGAAAATGGGACCCTGAGGGCCAAACCTACAGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006578.10 ENSMUST00000094325.5 ENSMUST00000111286.9

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu