Pregenerated sensors for NECTIN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022656Ensembl transcript IDs: ENSMUST00000023334.15, ENSMUST00000023335.13, ENSMUST00000096052.9, ENSMUST00000119941.2, ENSMUST00000121245.8, ENSMUST00000121803.8, ENSMUST00000124602.2, ENSMUST00000149901.2
Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTGGAACACAAGTCTGCAGCAACAGGGACAAAGTAGACACAGCTaGTCCCAAGGGGACAGAGGGCAGACATCCCCGAGGAGCCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: QWNTSLQQQGQSRHS*SQGDRGQTSPRSPW Trigger: CCAAGGGCTCCTCGGGGATGTCTGCCCTCTGTCCCCTTGGGACCAGCTGTGTCTACTTTGTCCCTGTTGCTGCAGACTTGTGTTCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | GAAGGACACGGGGCACTAACACGGGTTCACAAGCACACAGAGGCTTaGCGCTTCCCCTTGCCTTTGTCACCATTGGTTACAGCAGTCCGC | + |
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Preference number: 1 (lower is better) Translates to: EGHGALTRVHKHTEA*RFPLPLSPLVTAVR Trigger: GCGGACTGCTGTAACCAATGGTGACAAAGGCAAGGGGAAGCGGCAAGCCTCTGTGTGCTTGTGAACCCGTGTTAGTGCCCCGTGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | GTGCAGCCTTGTGAGACAGAGAACCGCTGGCTCGAAGGGCAGAGCTaGCAAGCAGACATGTTAAGAGGCGAGGACCACATGGAGACTGAG | + |
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Preference number: 1 (lower is better) Translates to: VQPCETENRWLEGQS*QADMLRGEDHMETE Trigger: CTCAGTCTCCATGTGGTCCTCGCCTCTTAACATGTCTGCTTGGCAGCTCTGCCCTTCGAGCCAGCGGTTCTCTGTCTCACAAGGCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | GGCAATGGGGGCTGTGGTGAAGGTGAGCATGTCCCCCTGCCTCCTTaGAATGCAGTGGCAGCAGTCCATGGGCAACTGCTATGTGGATTT | + |
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Preference number: 1 (lower is better) Translates to: GNGGCGEGEHVPLPP*NAVAAVHGQLLCGF Trigger: AAATCCACATAGCAGTTGCCCATGGACTGCTGCCACTGCATTCCAAGGAGGCAGGGGGACATGCTCACCTTCACCACAGCCCCCATTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | CTATCCCCAGGGTTTGAACTCAGGGTCCCAGGCTTGCGTGGTAGGTaGCTTTACTGGAGGAGCCACCTCAATGGCCCAGATGTGAAATAC | + |
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Preference number: 1 (lower is better) Translates to: LSPGFELRVPGLRGR*LYWRSHLNGPDVKY Trigger: GTATTTCACATCTGGGCCATTGAGGTGGCTCCTCCAGTAAAGGCACCTACCACGCAAGCCTGGGACCCTGAGTTCAAACCCTGGGGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | CCAAAGTACTCCAGCGATGGGGCAGAGGACCAGTGGAACTCTAGGTaGTCTGGAGCCGTAGCCTCTGAAAACACTAATCCTACCGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: PKYSSDGAEDQWNSR*SGAVASENTNPTGD Trigger: ATCTCCGGTAGGATTAGTGTTTTCAGAGGCTACGGCTCCAGAGCACCTAGAGTTCCACTGGTCCTCTGCCCCATCGCTGGAGTACTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | ATTTCAAGAAGCAAGGCTTGCTGTGAGACCTGGACAGAGCCAGTGTaGGGCCTCACTGGTTTTCCTGGGGAACAGCTAGAGTTTCCTCCG | + |
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Preference number: 1 (lower is better) Translates to: ISRSKACCETWTEPV*GLTGFPGEQLEFPP Trigger: CGGAGGAAACTCTAGCTGTTCCCCAGGAAAACCAGTGAGGCCCCACACTGGCTCTGTCCAGGTCTCACAGCAAGCCTTGCTTCTTGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR TCA 90 bp | GACAACTGCATTCCCTGCCAAACAAAGCAGCTGAAAGCTCACTGGTaGTCTACGGACCTACAACCGGGTGGTGTGGGAGTAGGAACCTGT | + |
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Preference number: 1 (lower is better) Translates to: DNCIPCQTKQLKAHW*STDLQPGGVGVGTC Trigger: ACAGGTTCCTACTCCCACACCACCCGGTTGTAGGTCCGTAGATCACCAGTGAGCTTTCAGCTGCTTTGTTTGGCAGGGAATGCAGTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | GGGTTTGAACTCAGGGTCCCAGGCTTGCGTGGTAGGTGCCTTTACTaGAGGAGCCACCTCAATGGCCCAGATGTGAAATACTTTATGGGA | + |
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Preference number: 1 (lower is better) Translates to: GFELRVPGLRGRCLY*RSHLNGPDVKYFMG Trigger: TCCCATAAAGTATTTCACATCTGGGCCATTGAGGTGGCTCCTCCAGTAAAGGCACCTACCACGCAAGCCTGGGACCCTGAGTTCAAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | TCTCAAGATGGATCAAGGATGGCTTTGCCTTTAAGTTTCCCTCCGTaGTCTCCATTGCCAATCTCGGTGATGGACAGCTGGCCAAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: SQDGSRMALPLSFPP*SPLPISVMDSWPRE Trigger: CTCCCTTGGCCAGCTGTCCATCACCGAGATTGGCAATGGAGAGCACGGAGGGAAACTTAAAGGCAAAGCCATCCTTGATCCATCTTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | AAAGCAGCTGAAAGCTCACTGGTGATCTACGGACCTACAACCGGGTaGTGTGGGAGTAGGAACCTGTCTGTTCCCAAGGGAGTTCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: KAAESSLVIYGPTTG*CGSRNLSVPKGVLL Trigger: TAGAAGAACTCCCTTGGGAACAGACAGGTTCCTACTCCCACACCACCCGGTTGTAGGTCCGTAGATCACCAGTGAGCTTTCAGCTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR TCA 90 bp | AGCCTGTGTGGTGAGCTGGCCTTGAAAGCTATAAGAGGTGAGCACTaGGCTTGTCTTGTGCGAGCGAATGGAAACCTGGCTAAAATGTCC | + |
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Preference number: 1 (lower is better) Translates to: SLCGELALKAIRGEH*ACLVRANGNLAKMS Trigger: GGACATTTTAGCCAGGTTTCCATTCGCTCGCACAAGACAAGCTCAGTGCTCACCTCTTATAGCTTTCAAGGCCAGCTCACCACACAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR TCA 90 bp | GCAGCCCTCACATATCTCAAAGGCTGCCAAAACAGCCTTAGCAGCTaGCGAGGAGGTTCAGAGTATATTCCCGAGTGGAAGAAACCCACA | + |
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Preference number: 1 (lower is better) Translates to: AALTYLKGCQNSLSS*RGGSEYIPEWKKPT Trigger: TGTGGGTTTCTTCCACTCGGGAATATACTCTGAACCTCCTCGTCAGCTGCTAAGGCTGTTTTGGCAGCCTTTGAGATATGTGAGGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | CATCCTTGCTCCCAGAACTACCCATCATCCAGGGAATGGCATGGGTaGGTATATTACTGCAGAACCCCCTCTATGACTTATCCCACAAAG | + |
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Preference number: 1 (lower is better) Translates to: HPCSQNYPSSREWHG*VYYCRTPSMTYPTK Trigger: CTTTGTGGGATAAGTCATAGAGGGGGTTCTGCAGTAATATACCCACCCATGCCATTCCCTGGATGATGGGTAGTTCTGGGAGCAAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | CAGAACTACCCATCATCCAGGGAATGGCATGGGTGGGTATATTACTaGAGAACCCCCTCTATGACTTATCCCACAAAGCTGGACAAACAA | + |
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Preference number: 1 (lower is better) Translates to: QNYPSSREWHGWVYY*RTPSMTYPTKLDKQ Trigger: TTGTTTGTCCAGCTTTGTGGGATAAGTCATAGAGGGGGTTCTGCAGTAATATACCCACCCATGCCATTCCCTGGATGATGGGTAGTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | TTCATCCTTTCTACCCTTCTCTGGCTTCTTTCCAGCTATGAATGTTaGCACCCTGGGTGGTGCCGAGTCCTTATTGAACAGAGACAAACA | + |
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Preference number: 1 (lower is better) Translates to: FILSTLLWLLSSYEC*HPGWCRVLIEQRQT Trigger: TGTTTGTCTCTGTTCAATAAGGACTCGGCACCACCCAGGGTGGCAACATTCATAGCTGGAAAGAAGCCAGAGAAGGGTAGAAAGGATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | TCTGGCCTTTCCAGGATACACAGTAAAGTGACACTACTCTCAAGATaGATCAAGGATGGCTTTGCCTTTAAGTTTCCCTCCGTGCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SGLSRIHSKVTLLSR*IKDGFAFKFPSVLS Trigger: GGAGAGCACGGAGGGAAACTTAAAGGCAAAGCCATCCTTGATCCATCTTGAGAGTAGTGTCACTTTACTGTGTATCCTGGAAAGGCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | AGAATATGTGAGAGTACAGAGGTGTGGCTGAGCTGTACTGTGCCCTaGAGTAAACTAGTACTTGCAGAACAAACCTCTGCTGCCTCTAGT | + |
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Preference number: 1 (lower is better) Translates to: RICESTEVWLSCTVP*SKLVLAEQTSAASS Trigger: ACTAGAGGCAGCAGAGGTTTGTTCTGCAAGTACTAGTTTACTCCAGGGCACAGTACAGCTCAGCCACACCTCTGTACTCTCACATATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR TCA 90 bp | CCAGGGAATGGCATGGGTGGGTATATTACTGCAGAACCCCCTCTATaGCTTATCCCACAAAGCTGGACAAACAAACAAAAAGAAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: PGNGMGGYITAEPPL*LIPQSWTNKQKEAE Trigger: CTCTGCTTCTTTTTGTTTGTTTGTCCAGCTTTGTGGGATAAGTCATAGAGGGGGTTCTGCAGTAATATACCCACCCATGCCATTCCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | AAATTTGAGCATCCTTGCTCCCAGAACTACCCATCATCCAGGGAATaGCATGGGTGGGTATATTACTGCAGAACCCCCTCTATGACTTAT | + |
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Preference number: 1 (lower is better) Translates to: KFEHPCSQNYPSSRE*HGWVYYCRTPSMTY Trigger: ATAAGTCATAGAGGGGGTTCTGCAGTAATATACCCACCCATGCCATTCCCTGGATGATGGGTAGTTCTGGGAGCAAGGATGCTCAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | ATACTCCAAAGCATGTCGATATCCTCACATTTAGACCATACAAAATaGCAGGCATGGAGGGAACTCTCATGGAGGACACAACACGTCACT | + |
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Preference number: 1 (lower is better) Translates to: ILQSMSISSHLDHTK*QAWRELSWRTQHVT Trigger: AGTGACGTGTTGTGTCCTCCATGAGAGTTCCCTCCATGCCTGGCATTTTGTATGGTCTAAATGTGAGGATATCGACATGCTTTGGAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | GGGGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTaGTTTCTGCTTGTAACAGCTCTTATAGTTTTATGTGCAGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: GVRTDIYRQQGSPCI*FLLVTALIVLCAGY Trigger: ATAGCCTGCACATAAAACTATAAGAGCTGTTACAAGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | GACAGAGGGGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATaGATTTGCTTTCTGCTTGTAACAGCTCTTATAGTTTTATGTGCA | + |
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Preference number: 1 (lower is better) Translates to: DRGVRTDIYRQQGSP*ICFLLVTALIVLCA Trigger: TGCACATAAAACTATAAGAGCTGTTACAAGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACCCCTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | CTAAAGATTAATTCCAGTGTAAAGTATTATCGGGTGAGGTTGGAATaGAAGCACGCAGCCCTCACATATCTCAAAGGCTGCCAAAACAGC | + |
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Preference number: 1 (lower is better) Translates to: LKINSSVKYYRVRLE*KHAALTYLKGCQNS Trigger: GCTGTTTTGGCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACCTCACCCGATAATACTTTACACTGGAATTAATCTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CCA 90 bp | GGAGGCGCTAGAATAAGCTATTATGAAGCTTATGTGACCCATGTTTaGGGCCAACAACTATCAAATATAGCAGTTTGCCCAAGGACTTTT | + |
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Preference number: 1 (lower is better) Translates to: GGARISYYEAYVTHV*GQQLSNIAVCPRTF Trigger: AAAAGTCCTTGGGCAAACTGCTATATTTGATAGTTGTTGGCCCCAAACATGGGTCACATAAGCTTCATAATAGCTTATTCTAGCGCCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR GCA 90 bp | TCTGCTTGTAACAGCTCTTATAGTTTTATGTGCAGGCTATTATCCTaGCCTAGAAAGAAAACCAAGACAACTGCATTCCCTGCCAAACAA | + |
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Preference number: 1 (lower is better) Translates to: SACNSSYSFMCRLLS*PRKKTKTTAFPAKQ Trigger: TTGTTTGGCAGGGAATGCAGTTGTCTTGGTTTTCTTTCTAGGGCAGGATAATAGCCTGCACATAAAACTATAAGAGCTGTTACAAGCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR TCA 90 bp | GTGTGCCTCAGACCAATAAAGTACTCTGCATTAGAATTTAAATCTTaGGACAGTAGTATAGCAGTGAAAACTGTAAAGCAGCTCAGATAC | + |
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Preference number: 1 (lower is better) Translates to: VCLRPIKYSALEFKS*DSSIAVKTVKQLRY Trigger: GTATCTGAGCTGCTTTACAGTTTTCACTGCTATACTACTGTCTCAAGATTTAAATTCTAATGCAGAGTACTTTATTGGTCTGAGGCACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
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| 3UTR CCA 90 bp | AAATGCTTCAGTGTCAAAGAAAACTCTCGGTACAACCCTAACTATTaGAAAACAATCACAGGGAATCCTAGAACATTAGTTACATTGGCT | + |
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Preference number: 1 (lower is better) Translates to: KCFSVKENSRYNPNY*KTITGNPRTLVTLA Trigger: AGCCAATGTAACTAATGTTCTAGGATTCCCTGTGATTGTTTTCCAATAGTTAGGGTTGTACCGAGAGTTTTCTTTGACACTGAAGCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR TCA 90 bp | TCTTTGGCATGTCACTATCAACCTGGTAATATTCTCATTTCCTCCTaGAGCATAGGCTGGAAATGTATACTATTTATTTTCCCGTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: SLACHYQPGNILISS*SIGWKCILFIFPFL Trigger: TAGAAACGGGAAAATAAATAGTATACATTTCCAGCCTATGCTTCAGGAGGAAATGAGAATATTACCAGGTTGATAGTGACATGCCAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CAA 90 bp | ACACGGGTTCACAAGCACACAGAGGCTTGCCGCTTCCCCTTGCCTTaGTCACCATTGGTTACAGCAGTCCGCTCCTCTCCTCTGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TRVHKHTEACRFPLP*SPLVTAVRSSPLAS Trigger: AGAGGCCAGAGGAGAGGAGCGGACTGCTGTAACCAATGGTGACAAAGGCAAGGGGAAGCGGCAAGCCTCTGTGTGCTTGTGAACCCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CAA 90 bp | GGAAGGACACGGGGCACTAACACGGGTTCACAAGCACACAGAGGCTaGCCGCTTCCCCTTGCCTTTGTCACCATTGGTTACAGCAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: GRTRGTNTGSQAHRG*PLPLAFVTIGYSSP Trigger: CGGACTGCTGTAACCAATGGTGACAAAGGCAAGGGGAAGCGGCAAGCCTCTGTGTGCTTGTGAACCCGTGTTAGTGCCCCGTGTCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCCATCTTATTCCCCACCCCCATCAGTGCAGCCTTGTGAGACAGAGAACCGCCCTTGGAGCCTACTaGCTAGGAAGGACACGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LSHLIPHPHQCSLVRQRTALGAY*LGRTRG Trigger: GCCCCGTGTCCTTCCTAGCCAGTAGGCTCCAAGGGC...GGTTCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGGAATAAGATGGCTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CAA 90 bp | GCACTAACACGGGTTCACAAGCACACAGAGGCTTGCCGCTTCCCCTaGCCTTTGTCACCATTGGTTACAGCAGTCCGCTCCTCTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ALTRVHKHTEACRFP*PLSPLVTAVRSSPL Trigger: CAGAGGAGAGGAGCGGACTGCTGTAACCAATGGTGACAAAGGCAAGGGGAAGCGGCAAGCCTCTGTGTGCTTGTGAACCCGTGTTAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CAA 90 bp | TTGACTTCTATGCTATCCCCAGGGTTTGAACTCAGGGTCCCAGGCTaGCGTGGTAGGTGCCTTTACTGGAGGAGCCACCTCAATGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LTSMLSPGFELRVPG*RGRCLYWRSHLNGP Trigger: TGGGCCATTGAGGTGGCTCCTCCAGTAAAGGCACCTACCACGCAAGCCTGGGACCCTGAGTTCAAACCCTGGGGATAGCATAGAAGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR TCA 90 bp | AGCACAGCATCGCAGTGTAGCTTTGTAGCTGTCAACCCTGGCAGAGAGGCTACTGCCTTCCCCTCCAAATaGACACACCACTGGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: STASQCSFVAVNPGREATAFPSK*THHWRP Trigger: TGGCCTCCAGTGGTGTGTTCATTTGGAGGGGAAGGC...AGTAGCCTCTCTGCCAGGGTTGACAGCTACAAAGCTACACTGCGATGCTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR GCA 90 bp | GGTTGGAATGGAAGCACGCAGCCCTCACATATCTCAAAGGCTGCCAAAACAGCCCCTGCCTCCTTGGAATaGAGTGGCAGCAGTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: GWNGSTQPSHISKAAKTAPASLE*SGSSPW Trigger: CCATGGACTGCTGCCACTGCATTCCAAGGAGGCAGG...GGCTGTTTTGGCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR CCA 90 bp | AACAGGGGATCCTCTCATTTCAAGGCAGGCCCTACTGTGTACAGCAGGCACAGCACAGTAGGTTCCTCCTaGGACAGTGCTAAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: NRGSSHFKAGPTVYSRHSTVGSS*DSAKDR Trigger: CCTGTCCTTAGCACTGTCCCAGGAGGAACCTACTGT...GCTGTGCCTGCTGTACACAGTAGGGCCTGCCTTGAAATGAGAGGATCCCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR TCA 90 bp | AACAGGGGATCCTCTCATTTCAAGGCAGGCCCTACTGTGTACAGCAGGCACAGCCTAAAGCCTGTGTGGTaGGCTGGCCTTGAAAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: NRGSSHFKAGPTVYSRHSLKPVW*AGLESY Trigger: ATAGCTTTCAAGGCCAGCTCACCACACAGGCTTTAG...GCTGTGCCTGCTGTACACAGTAGGGCCTGCCTTGAAATGAGAGGATCCCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGCTAGGGGAAGCCATGGTTGTGAATGTCAGGAGCCTCTCAAATAGCGCTGCTCTGTGGCATTTCTaGAATGGCCCTCTCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GQLGEAMVVNVRSLSNSAALWHF*NGPLCL Trigger: AAGGCAGAGAGGGCCATTTCAGAAATGCCACAGAGC...AGCGCTATTTGAGAGGCTCCTGACATTCACAACCATGGCTTCCCCTAGCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTACCCATCATCCAGGGAATGGCATGGGTGGGTATATTACTGCAGAACCCCTCCGCTCCTCTCCTCTaGCCTCTGTACGCAGGTATT | + |
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Preference number: 2 (lower is better) Translates to: ELPIIQGMAWVGILLQNPSAPLL*PLYAGI Trigger: AATACCTGCGTACAGAGGCCAGAGGAGAGGAGCGGA...GGGGTTCTGCAGTAATATACCCACCCATGCCATTCCCTGGATGATGGGTAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR TCA 90 bp | CTTAGCCATCTTATTCCCCACCCCCATCAGTGCAGCCTTGTGAGACAGAGAACCACTATTCCGACCAGGTaGCATGGGGAGGAGAATAGA | + |
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Preference number: 2 (lower is better) Translates to: LSHLIPHPHQCSLVRQRTTIPTR*HGEENR Trigger: TCTATTCTCCTCCCCATGTCACCTGGTCGGAATAGT...GGTTCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGGAATAAGATGGCTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR TCA 90 bp | GGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTGCTTTCTGCTGTAACGGGGAGACCATaGCCAGCTGTGGATATGCCC | + |
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Preference number: 2 (lower is better) Translates to: GTYGYLQATREPMHLLSAVTGRP*PAVDMP Trigger: GGGCATATCCACAGCTGGTCATGGTCTCCCCGTTAC...AGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGAATGGAAGCACGCAGCCCTCACATATCTCAAAGGCTGCCAAAACAGCCCAAACAGTGGAGTCCTaGGCACTTGTCAGTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GWNGSTQPSHISKAAKTAQTVES*ALVSLE Trigger: CTCCAAACTGACAAGTGCCCAGGACTCCACTGTTTG...GGCTGTTTTGGCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGCTAGGGGAAGCCATGGTTGTGAATGTCAGGAGCCTCTCAAATAGCGCTCTCTGCCTTGGGTACTaGTTTCACACCAAAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: GQLGEAMVVNVRSLSNSALCLGY*FHTKDS Trigger: GCTGTCTTTGGTGTGAAACCAGTACCCAAGGCAGAG...AGCGCTATTTGAGAGGCTCCTGACATTCACAACCATGGCTTCCCCTAGCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
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| 3UTR CAA 90 bp | GGATCAAGGATGGCTTTGCCTTTAAGTTTCCCTCCGTGCTCTCCATaGCCAATCTCGGTGATGGACAGCTGGCCAAGGGAGATAAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GSRMALPLSFPPCSP*PISVMDSWPREISS Trigger: AGAACTTATCTCCCTTGGCCAGCTGTCCATCACCGAGATTGGCAATGGAGAGCACGGAGGGAAACTTAAAGGCAAAGCCATCCTTGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR CAA 90 bp | CTGCATCCGATGCTCTGTGGCATTTCTGAAATGGCCCTCTCTGCCTaGGGTACTGGTTTCACACCAAAGACAGCTGCTTCTGAGATGACT | + |
|
Preference number: 2 (lower is better) Translates to: LHPMLCGISEMALSA*GTGFTPKTAASEMT Trigger: AGTCATCTCAGAAGCAGCTGTCTTTGGTGTGAAACCAGTACCCAAGGCAGAGAGGGCCATTTCAGAAATGCCACAGAGCATCGGATGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTTGGAATGGAAGCACGCAGCCCTCACATATCTCAAAGGCTGCCAAAACAGCCTCCCTGCCTCCACAATaGACTTTTGTGGTGTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: GWNGSTQPSHISKAAKTASLPPQ*TFVVWI Trigger: AATCCACACCACAAAAGTGCATTGTGGAGGCAGGGA...GGCTGTTTTGGCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGCAAATCTGATGATATGGATTCCCAGGGAGGATTTCCCTCGGGGTCTCCTTTCAGGGAACTGAGATaGAGCGGATCTGGTGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CSKSDDMDSQGGFPSGSPFRELR*SGSGGL Trigger: CAGACCACCAGATCCGCTGCATCTCAGTTCCCTGAA...AGGAGACCCCGAGGGAAATCCTCCCTGGGAATCCATATCATCAGATTTGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CCA 90 bp | GATCCTAGCCAGTACAGATGCTTCAGGGAACTGAGATGCAGCGGATCTGGTGGTCCATCATCCAGGGAATaGCATGGGTGGGTATATTAC | + |
|
Preference number: 2 (lower is better) Translates to: DPSQYRCFRELRCSGSGGPSSRE*HGWVYY Trigger: GTAATATACCCACCCATGCCATTCCCTGGATGATGG...ACCACCAGATCCGCTGCATCTCAGTTCCCTGAAGCATCTGTACTGGCTAGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CCA 90 bp | ACATCAAGATTCAGCACTGGGGGATTAGGGCATGGACAAAGCAAAAGGAGCTGGTGGCCCTCTCTGCCTTaGGTACTGGTTTCACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: TSRFSTGGLGHGQSKRSWWPSLP*VLVSHQ Trigger: TTGGTGTGAAACCAGTACCCAAGGCAGAGAGGGCCA...CCAGCTCCTTTTGCTTTGTCCATGCCCTAATCCCCCAGTGCTGAATCTTGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| 3UTR CAA 90 bp | CAAACGAAGACATCCCACCCCTCTCCCTGCCTCCACAATGCACTTTaGTGGTGTGGATTCTACAATCTGCTTCCCAGCAGGACTTTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QTKTSHPSPCLHNAL*WCGFYNLLPSRTLE Trigger: TTCTAAAGTCCTGCTGGGAAGCAGATTGTAGAATCCACACCACAAAAGTGCATTGTGGAGGCAGGGAGAGGGGTGGGATGTCTTCGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGATTCAGCACTGGGGGATTAGGGCATGGACAAAGCAAAAGGAGCTGGCATCTTCACCTTTCCTTCTaGCTTGACCTTGAGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: SRFSTGGLGHGQSKRSWHLHLSF*LDLEPQ Trigger: CTGTGGCTCAAGGTCAAGTCAGAAGGAAAGGTGAAG...ATGCCAGCTCCTTTTGCTTTGTCCATGCCCTAATCCCCCAGTGCTGAATCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTGGGAAACGAGCTAATTGGGTCAGTGGAACACAAGTCTGCAGCAACAGGGCTGAAATCACTTAGATaGCTCAGTGTCTCTCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: EVGNELIGSVEHKSAATGLKSLR*LSVSQV Trigger: GACCTGAGAGACACTGAGGCATCTAAGTGATTTCAG...CCCTGTTGCTGCAGACTTGTGTTCCACTGACCCAATTAGCTCGTTTCCCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | AAAATACTTCTGCCATTCATTACCCAGGATTCAACACCCAGGTACCGTGAAGGGAAGCACACAGAGGCTTaGCGCTTCCCCTTGCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: KILLPFITQDSTPRYREGKHTEA*RFPLPL Trigger: CAAAGGCAAGGGGAAGCGGCAAGCCTCTGTGTGCTT...CCCTTCACGGTACCTGGGTGTTGAATCCTGGGTAATGAATGGCAGAAGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGCAAATCTGATGATATGGATTCCCAGGGAGGATTTCCCTCGGGGTCTCCTGACAGGGAAAGCCTCTaGTTCATGGGTGGGAACAAT | + |
|
Preference number: 2 (lower is better) Translates to: CSKSDDMDSQGGFPSGSPDRESL*FMGGNN Trigger: ATTGTTCCCACCCATGAACCAGAGGCTTTCCCTGTC...AGGAGACCCCGAGGGAAATCCTCCCTGGGAATCCATATCATCAGATTTGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR TCA 90 bp | GGTTGGAATGGAAGCACGCAGCCCTCACATATCTCAAAGGCTGCCAAAACAGCCATGGGTGGGAACAATTaGTACCTGAGGTACTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GWNGSTQPSHISKAAKTAMGGNN*YLRYFN Trigger: GTTAAAGTACCTCAGGTATCAATTGTTCCCACCCAT...GGCTGTTTTGGCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTGCCAAACAAAGCAGCTGAAAGCTCACTGGTGATCTACGGACCTACAACCTTAGACCATACAAAATaGCAGGCATGGAGGGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: SLPNKAAESSLVIYGPTTLDHTK*QAWREL Trigger: GAGTTCCCTCCATGCCTGGCATTTTGTATGGTCTAA...GGTTGTAGGTCCGTAGATCACCAGTGAGCTTTCAGCTGCTTTGTTTGGCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTGCCAAACAAAGCAGCTGAAAGCTCACTGGTGATCTACGGACCTACAACCTTTTTACCACAGTTCTaGGCAGTTGACAGGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLPNKAAESSLVIYGPTTFLPQF*AVDRES Trigger: GCTTTCCCTGTCAACTGCGCAGAACTGTGGTAAAAA...GGTTGTAGGTCCGTAGATCACCAGTGAGCTTTCAGCTGCTTTGTTTGGCAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | ATTCACTTCAAATTTTGCAATGGGGTCTCCAGTAGCCCAGGCAGGTCTCAAACTAGGTTTGCAGATGTGTaGCACAACAGCTGGGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IHFKFCNGVSSSPGRSQTRFADV*HNSWAR Trigger: CCTTGCCCAGCTGTTGTGGCACACATCTGCAAACCT...AGTTTGAGACCTGCCTGGGCTACTGGAGACCCCATTGCAAAATTTGAAGTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| 3UTR CAA 90 bp | ATGCCACCGTCAAGGGCTCCAAATACAGAGGTCAGCAGACTAATTTaGGACGGCATTCTTCAGTTGAGGGGACTGGTTAATCAAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: MPPSRAPNTEVSRLI*DGILQLRGLVNQTL Trigger: AAGGGTTTGATTAACCAGTCCCCTCAACTGAAGAATGCCGTCCAAAATTAGTCTGCTGACCTCTGTATTTGGAGCCCTTGACGGTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGCAAATCTGATGATATGGATTCCCAGGGAGGATTTCCCTCGGGGTCTCCTATTATGAAGCTTATGTaGCCCATGTTTGGGGCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: CSKSDDMDSQGGFPSGSPIMKLM*PMFGAN Trigger: GTTGGCCCCAAACATGGGTCACATAAGCTTCATAAT...AGGAGACCCCGAGGGAAATCCTCCCTGGGAATCCATATCATCAGATTTGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGCAAATCTGATGATATGGATTCCCAGGGAGGATTTCCCTCGGGGTCTCCTCAACAAGGGAGCCCATaGATTTGCTTTCTGCTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CSKSDDMDSQGGFPSGSPQQGSP*ICFLLV Trigger: TACAAGCAGAAAGCAAATGCATGGGCTCCCTTGTTG...AGGAGACCCCGAGGGAAATCCTCCCTGGGAATCCATATCATCAGATTTGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGTTGGAATGGAAGCACGCAGCCCTCACATATCTCAAAGGCTGCCAAAACTGCACTTTTGTGGTGTaGATTCTACAATCTGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VRLEWKHAALTYLKGCQNCTFVV*ILQSAS Trigger: GGAAGCAGATTGTAGAATCCACACCACAAAAGTGCA...GTTTTGGCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CCA 90 bp | GGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTGCTTTCTGCTGAGGAGCCACCTCAATaGCCCAGATGTGAAATACTT | + |
|
Preference number: 2 (lower is better) Translates to: GTYGYLQATREPMHLLSAEEPPQ*PRCEIL Trigger: AAGTATTTCACATCTGGGCCATTGAGGTGGCTCCTC...AGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGGAATGGAAGCACGCAGCCCTCACATATCTCAAAGGCTGCCAAAACAGCCGAGTATATTCCCGAGTaGAAGAAACCCACATATTTC | + |
|
Preference number: 2 (lower is better) Translates to: GWNGSTQPSHISKAAKTAEYIPE*KKPTYF Trigger: GAAATATGTGGGTTTCTTCCACTCGGGAATATACTC...GGCTGTTTTGGCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | GGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTGCTTTCTGCTAGTGGAACACAAGTCTaGAGCAACAGGGACAAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: GTYGYLQATREPMHLLSASGTQV*SNRDKV Trigger: TACTTTGTCCCTGTTGCTGCAGACTTGTGTTCCACT...AGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGCCATCTTATTCCCCACCCCCATCAGTGCAGCCTTGTGAGACAGAGAACCTCTTATAGTTTTATGTaGAGGCTATTATCCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LSHLIPHPHQCSLVRQRTSYSFM*RLLSCP Trigger: AGGGCAGGATAATAGCCTGCACATAAAACTATAAGA...GGTTCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGGAATAAGATGGCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 90 bp | CTTGGGCTAAAGATTAATTCCAGTGTAAAGTATTATCGGGTGAGGTaGGAATGGAAGCACGCAGCCCTCACATATCTCAAAGGCTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LGLKINSSVKYYRVR*EWKHAALTYLKGCQ Trigger: TTGGCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACCTCACCCGATAATACTTTACACTGGAATTAATCTTTAGCCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAAGTGTTAGTAGCTAAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGCTGAAATCACTTAGATaGCTCAGTGTCTCTCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GQVLVAKLQSYREVKLQVLKSLR*LSVSQV Trigger: GACCTGAGAGACACTGAGGCATCTAAGTGATTTCAG...CACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTTAGCTACTAACACTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023335.13 ENSMUST00000121803.8 |
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| 3UTR-3UTR GCA 90 bp | GGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTGCTTTCTGCTAAATTTGAGCATCCTTaGTCCCAGAACTACCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: GTYGYLQATREPMHLLSAKFEHP*SQNYPS Trigger: TGATGGGTAGTTCTGGGAGCAAGGATGCTCAAATTT...AGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | GGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTGCTTTCTGCTGAAAACCAAGACAACTaGATTCCCTGCCAAACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GTYGYLQATREPMHLLSAENQDN*IPCQTK Trigger: CTTTGTTTGGCAGGGAATGCAGTTGTCTTGGTTTTC...AGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR GCA 90 bp | CTTAGCCATCTTATTCCCCACCCCCATCAGTGCAGCCTTGTGAGACAGAGAACCAATTATTTTCAAACATaGCGATCAGTTTCAGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LSHLIPHPHQCSLVRQRTNYFQT*RSVSVC Trigger: GCACACTGAAACTGATCGGCATGTTTGAAAATAATT...GGTTCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGGAATAAGATGGCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGTCTTTTCTCACAAACAGAAATACACAGCATCAAACTCTTTCTATACAAGTCCCCCTGCCTCCTTaGAATGCAGTGGCAGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LGSFLTNRNTQHQTLSIQVPLPP*NAVAAV Trigger: GACTGCTGCCACTGCATTCCAAGGAGGCAGGGGGAC...TTGTATAGAAAGAGTTTGATGCTGTGTATTTCTGTTTGTGAGAAAAGACCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGTCTTTTCTCACAAACAGAAATACACAGCATCAAACTCTTTCTATACAAGCTTGCTGTGAGACCTaGACAGAGCCAGTGTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LGSFLTNRNTQHQTLSIQACCET*TEPVWG Trigger: GCCCCACACTGGCTCTGTCCAGGTCTCACAGCAAGC...TTGTATAGAAAGAGTTTGATGCTGTGTATTTCTGTTTGTGAGAAAAGACCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 90 bp | AGGGGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTaGCTTTCTGCTTGTAACAGCTCTTATAGTTTTATGTGCAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RGTYGYLQATREPMH*LSACNSSYSFMCRL Trigger: TAGCCTGCACATAAAACTATAAGAGCTGTTACAAGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 90 bp | CCCAAGAGGATAGAAGCCTGTCAGTTGGTTGTCAACTCAGATATTTaGCTTTTTCCCATAAATCTGCATAGTGCTGACAGTGCAACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PKRIEACQLVVNSDI*LFPINLHSADSATH Trigger: GTGGGTTGCACTGTCAGCACTATGCAGATTTATGGGAAAAAGCAAAATATCTGAGTTGACAACCAACTGACAGGCTTCTATCCTCTTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGGTCTTTTCTCACAAACAGAAATACACAGCATCAAACTCTTTCTATACAACCCCACCCCCATCAGTaGAGCCTTGTGAGACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LGSFLTNRNTQHQTLSIQPHPHQ*SLVRQR Trigger: TCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGG...TTGTATAGAAAGAGTTTGATGCTGTGTATTTCTGTTTGTGAGAAAAGACCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGGTCTTTTCTCACAAACAGAAATACACAGCATCAAACTCTTTCTATACAAGGACCTACAACCGGGTaGTGTGGGAGTAGGAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGSFLTNRNTQHQTLSIQGPTTG*CGSRNL Trigger: CAGGTTCCTACTCCCACACCACCCGGTTGTAGGTCC...TTGTATAGAAAGAGTTTGATGCTGTGTATTTCTGTTTGTGAGAAAAGACCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCAAATCTGATGATATGGATTCCCAGGGAGGATTTCCCTCGGGGTCTCCTGCTTTGGGCTTAATATaGATAAAAGTCCTGGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: CSKSDDMDSQGGFPSGSPALGLI*IKVLDS Trigger: AGAATCCAGGACTTTTATCCATATTAAGCCCAAAGC...AGGAGACCCCGAGGGAAATCCTCCCTGGGAATCCATATCATCAGATTTGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGGTCTTTTCTCACAAACAGAAATACACAGCATCAAACTCTTTCTATACAAAGGAATCTGGCTCACTaGATCAGGGAGCACTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LGSFLTNRNTQHQTLSIQRNLAH*IREHCW Trigger: CCAGCAGTGCTCCCTGATTCAGTGAGCCAGATTCCT...TTGTATAGAAAGAGTTTGATGCTGTGTATTTCTGTTTGTGAGAAAAGACCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CCA 90 bp | TGGCACCTTGTAACTACAAACTGTAACTGTAACCTACAAACGCTGAGGAATTTTATCAAGATTCAGCACTaGGGGATTAGGGCATGGACA | + |
|
Preference number: 2 (lower is better) Translates to: WHLVTTNCNCNLQTLRNFIKIQH*GIRAWT Trigger: TGTCCATGCCCTAATCCCCCAGTGCTGAATCTTGAT...AAAATTCCTCAGCGTTTGTAGGTTACAGTTACAGTTTGTAGTTACAAGGTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| 3UTR-3UTR GCA 90 bp | GATAGAAGCCTGTCAGTTGGTTGTCAACTCAGATATTTTGCTTTTTCCCATAAAACATATCTCAAAGGCTaGCAAAACAGCCTTAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: DRSLSVGCQLRYFAFSHKTYLKG*QNSLSS Trigger: GCTGCTAAGGCTGTTTTGGCAGCCTTTGAGATATGT...TTTATGGGAAAAAGCAAAATATCTGAGTTGACAACCAACTGACAGGCTTCTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 90 bp | TGGAGCACTGATTCTCTAATTCACAGTAGCCATCACTTTTCTAATTaGTACACAAAGTCTGATCACTCACTCATTTCAGAGGAATACTTG | + |
|
Preference number: 2 (lower is better) Translates to: WSTDSLIHSSHHFSN*YTKSDHSLISEEYL Trigger: CAAGTATTCCTCTGAAATGAGTGAGTGATCAGACTTTGTGTACAAATTAGAAAAGTGATGGCTACTGTGAATTAGAGAATCAGTGCTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAATGAAGAAAACAGGAAGGGATTGCCAACATTCATCAGCAAGTGTTATCAATGCAGCTCAGATACATTaGACCCAGGTTTTACATTTT | + |
|
Preference number: 2 (lower is better) Translates to: EMKKTGRDCQHSSASVINAAQIH*TQVLHF Trigger: AAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGC...ATTGATAACACTTGCTGATGAATGTTGGCAATCCCTTCCTGTTTTCTTCATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAAAAGCCACTCTACAGTAATTATGGCAAGGCTCATTTAAATGCAGAGGTATCTTTCTTACCTGTGTaGCTCAGACCAATAAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: FEKPLYSNYGKAHLNAEVSFLPV*LRPIKY Trigger: GTACTTTATTGGTCTGAGGCACACAGGTAAGAAAGA...TACCTCTGCATTTAAATGAGCCTTGCCATAATTACTGTAGAGTGGCTTTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| 3UTR-3UTR GCA 90 bp | ATTCACAGTAGCCATCACTTTTCTAATTTGTACACAAAGTCTGATCACTCACTCATTCACTTCAAATTTTaGAATGGGGTCTCCAGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: IHSSHHFSNLYTKSDHSLIHFKF*NGVSSS Trigger: GCTACTGGAGACCCCATTGCAAAATTTGAAGTGAAT...GAGTGAGTGATCAGACTTTGTGTACAAATTAGAAAAGTGATGGCTACTGTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAAAAGCCACTCTACAGTAATTATGGCAAGGCTCATTTAAATGCAGAGGTAAGCTCGAAATCAACTTaGAAAAGCTTATTCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: FEKPLYSNYGKAHLNAEVSSKST*KSLFFL Trigger: GAGGAAGAATAAGCTTTTTCAAGTTGATTTCGAGCT...TACCTCTGCATTTAAATGAGCCTTGCCATAATTACTGTAGAGTGGCTTTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGGTCTTTTCTCACAAACAGAAATACACAGCATCAAACTCTTTCTATACAATCAAATATAGCAGTTTaGCCAAGGACTTTTCATAGC | + |
|
Preference number: 2 (lower is better) Translates to: LGSFLTNRNTQHQTLSIQSNIAV*PRTFHS Trigger: GCTATGAAAAGTCCTTGGGCAAACTGCTATATTTGA...TTGTATAGAAAGAGTTTGATGCTGTGTATTTCTGTTTGTGAGAAAAGACCCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGGTCTTTTCTCACAAACAGAAATACACAGCATCAAACTCTTTCTATACAATGTGCAAAATACTTCTaGCATTCATTACCCAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: LGSFLTNRNTQHQTLSIQCAKYF*HSLPRI Trigger: AATCCTGGGTAATGAATGGCAGAAGTATTTTGCACA...TTGTATAGAAAGAGTTTGATGCTGTGTATTTCTGTTTGTGAGAAAAGACCCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | GAGGGCAGACATCCCCGAGGAGCCCTTGGAGCCTACTaGCTAGGAAGGACACGGGGCACTAACACGGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: EGRHPRGALGAY*LGRTRGTNTGS Trigger: TGAACCCGTGTTAGTGCCCCGTGTCCTTCCTAGCCAGTAGGCTCCAAGGGCTCCTCGGGGATGTCTGCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | GCCATCTTATTCCCCACCCCCATCAGTGCAGCCTTGTaGGACAGAGAACCGCTGGCTCGAAGGGCAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AILFPTPISAAL*DREPLARRAEL Trigger: CAGCTCTGCCCTTCGAGCCAGCGGTTCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGGAATAAGATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | CAGAGGCTTGCCGCTTCCCCTTGCCTTTGTCACCATTaGTTACAGCAGTCCGCTCCTCTCCTCTGGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QRLAASPCLCHH*LQQSAPLLWPL Trigger: CAGAGGCCAGAGGAGAGGAGCGGACTGCTGTAACCAATGGTGACAAAGGCAAGGGGAAGCGGCAAGCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | GGCTGTGGTGAAGGTGAGCATGTCCCCCTGCCTCCTTaGAATGCAGTGGCAGCAGTCCATGGGCAACTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GCGEGEHVPLPP*NAVAAVHGQLL Trigger: TAGCAGTTGCCCATGGACTGCTGCCACTGCATTCCAAGGAGGCAGGGGGACATGCTCACCTTCACCACAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | TGCTATCCCCAGGGTTTGAACTCAGGGTCCCAGGCTTaGGTGGTAGGTGCCTTTACTGGAGGAGCCACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CYPQGLNSGSQA*VVGAFTGGATS Trigger: TGAGGTGGCTCCTCCAGTAAAGGCACCTACCACGCAAGCCTGGGACCCTGAGTTCAAACCCTGGGGATAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | ACAAGTCTGCAGCAACAGGGACAAAGTAGACACAGCTaGTCCCAAGGGGACAGAGGGCAGACATCCCCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSLQQQGQSRHS*SQGDRGQTSPR Trigger: CCTCGGGGATGTCTGCCCTCTGTCCCCTTGGGACCAGCTGTGTCTACTTTGTCCCTGTTGCTGCAGACTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | CTAGCCCTTAGCCATCTTATTCCCCACCCCCATCAGTaGAGCCTTGTGAGACAGAGAACCGCTGGCTCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LALSHLIPHPHQ*SLVRQRTAGSK Trigger: CTTCGAGCCAGCGGTTCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGGAATAAGATGGCTAAGGGCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | TCCAGCGATGGGGCAGAGGACCAGTGGAACTCTAGGTaGTCTGGAGCCGTAGCCTCTGAAAACACTAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSDGAEDQWNSR*SGAVASENTNP Trigger: AGGATTAGTGTTTTCAGAGGCTACGGCTCCAGAGCACCTAGAGTTCCACTGGTCCTCTGCCCCATCGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | CCCCCTGCCTCCTTGGAATGCAGTGGCAGCAGTCCATaGGCAACTGCTATGTGGATTTACTTCTGTCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PPASLECSGSSP*ATAMWIYFCPS Trigger: ACTGGGACAGAAGTAAATCCACATAGCAGTTGCCCATGGACTGCTGCCACTGCATTCCAAGGAGGCAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | GAAAGCTCACTGGTGATCTACGGACCTACAACCGGGTaGTGTGGGAGTAGGAACCTGTCTGTTCCCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ESSLVIYGPTTG*CGSRNLSVPKG Trigger: TCCCTTGGGAACAGACAGGTTCCTACTCCCACACCACCCGGTTGTAGGTCCGTAGATCACCAGTGAGCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGCCATCTTATTCCCCACCCCCATCAGTGCAGCCTTGTGAGACAGAGAACCGCTTGCCGCTTCCCCTaGCCTTTGTCACCATTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LSHLIPHPHQCSLVRQRTACRFP*PLSPLV Trigger: AACCAATGGTGACAAAGGCAAGGGGAAGCGGCAAGC...GGTTCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGGAATAAGATGGCTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGTTGGAATGGAAGCACGCAGCCCTCACATATCTCAAAGGCTGCCAAAACCAAGCACACAGAGGCTaGCCGCTTCCCCTTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VRLEWKHAALTYLKGCQNQAHRG*PLPLAF Trigger: AAAGGCAAGGGGAAGCGGCAAGCCTCTGTGTGCTTG...GTTTTGGCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | GACTGTCATTCAAGCCCCAGAAGAGAAACACAGAGCTaGGAGGAGCAGGTGGTGACCTGGGCATCTCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DCHSSPRRETQS*EEQVVTWASQA Trigger: AGCTTGAGATGCCCAGGTCACCACCTGCTCCTCTCAGCTCTGTGTTTCTCTTCTGGGGCTTGAATGACAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | CCAGCCTCTCTCTCAGGTGCTAGGTTTGCAGATGTGTaGCACAACAGCTGGGCAAGGTGTTTAGAAGCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PASLSGARFADV*HNSWARCLEAS Trigger: GCTAGCTTCTAAACACCTTGCCCAGCTGTTGTGGCACACATCTGCAAACCTAGCACCTGAGAGAGAGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| 3UTR CCA 72 bp | AAGGTGAGCATGTCCCCCTGCCTCCTTGGAATGCAGTaGCAGCAGTCCATGGGCAACTGCTATGTGGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: KVSMSPCLLGMQ*QQSMGNCYVDL Trigger: TAAATCCACATAGCAGTTGCCCATGGACTGCTGCCACTGCATTCCAAGGAGGCAGGGGGACATGCTCACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | GCTCAGTCCCAAGCCACTGTAGCAAATCTGATGATATaGATTCCCAGGGAGGATTTCCCTCGGGGTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AQSQATVANLMI*IPREDFPRGLL Trigger: GAGGAGACCCCGAGGGAAATCCTCCCTGGGAATCCATATCATCAGATTTGCTACAGTGGCTTGGGACTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | ATTCCCTGCCAAACAAAGCAGCTGAAAGCTCACTGGTaGTCTACGGACCTACAACCGGGTGGTGTGGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: IPCQTKQLKAHW*STDLQPGGVGV Trigger: TACTCCCACACCACCCGGTTGTAGGTCCGTAGATCACCAGTGAGCTTTCAGCTGCTTTGTTTGGCAGGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | CCTGAAAGACCAAGCCCAGCTCTCTTCATATCTAAGTaGCCTGCCCCCTGTGCAGAGTTTCCTTGTGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PERPSPALFISK*PAPCAEFPCGN Trigger: GTTGCCACAAGGAAACTCTGCACAGGGGGCAGGTCACTTAGATATGAAGAGAGCTGGGCTTGGTCTTTCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | GGGAAACGAGCTAATTGGGTCAGTGGAACACAAGTCTaGAGCAACAGGGACAAAGTAGACACAGCTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GKRANWVSGTQV*SNRDKVDTAGP Trigger: GGGACCAGCTGTGTCTACTTTGTCCCTGTTGCTGCAGACTTGTGTTCCACTGACCCAATTAGCTCGTTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | GGATCAAGGATGGCTTTGCCTTTAAGTTTCCCTCCGTaGTCTCCATTGCCAATCTCGGTGATGGACAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSRMALPLSFPP*SPLPISVMDSW Trigger: CCAGCTGTCCATCACCGAGATTGGCAATGGAGAGCACGGAGGGAAACTTAAAGGCAAAGCCATCCTTGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGCAAATCTGATGATATGGATTCCCAGGGAGGATTTCCCTCGGGGTCTCCTCTTGGGGTGAAGGACTaGGTCCTGTTTAGCAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CSKSDDMDSQGGFPSGSPLGVKD*VLFSSD Trigger: GTCACTGCTAAACAGGACCAAGTCCTTCACCCCAAG...AGGAGACCCCGAGGGAAATCCTCCCTGGGAATCCATATCATCAGATTTGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | ATGTGCATGAGGTGTGTGGTGGCCCTTGTCTCTTCTTaGCTTCTATGCTATCCCCAGGGTTTGAACTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: MCMRCVVALVSS*LLCYPQGLNSG Trigger: CCCTGAGTTCAAACCCTGGGGATAGCATAGAAGTCAAGAAGAGACAAGGGCCACCACACACCTCATGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | ACCAAGACAACTGCATTCCCTGCCAAACAAAGCAGCTaGAAGCTCACTGGTGATCTACGGACCTACAACCGG | + |
|
Preference number: 3 (lower is better) Translates to: TKTTAFPAKQSS*KLTGDLRTYNR Trigger: CCGGTTGTAGGTCCGTAGATCACCAGTGAGCTTTCAGCTGCTTTGTTTGGCAGGGAATGCAGTTGTCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | CATCCTTTCTACCCTTCTCTGGCTTCTTTCCAGCTATaGATGTTGCCACCCTGGGTGGTGCCGAGTCCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: HPFYPSLASFQL*MLPPWVVPSPY Trigger: ATAAGGACTCGGCACCACCCAGGGTGGCAACATTCATAGCTGGAAAGAAGCCAGAGAAGGGTAGAAAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | ATCCCATTAAGTCAGGCTGATCCTAGCCAGTACAGATaGTTCAGGGAACTGAGATGCAGCGGATCTGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: IPLSQADPSQYR*FRELRCSGSGG Trigger: ACCACCAGATCCGCTGCATCTCAGTTCCCTGAAGCATCTGTACTGGCTAGGATCAGCCTGACTTAATGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | ACCCACCATTCCCTAGTTCCGTTTTTACCACAGTTCTaGGCAGTTGACAGGGAAAGCCTCTGGTTCATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: THHSLVPFLPQF*AVDRESLWFMG Trigger: ACCCATGAACCAGAGGCTTTCCCTGTCAACTGCGCAGAACTGTGGTAAAAACGGAACTAGGGAATGGTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | TCTACCCTTCTCTGGCTTCTTTCCAGCTATGAATGTTaGCACCCTGGGTGGTGCCGAGTCCTTATTGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: STLLWLLSSYEC*HPGWCRVLIEQ Trigger: CTGTTCAATAAGGACTCGGCACCACCCAGGGTGGCAACATTCATAGCTGGAAAGAAGCCAGAGAAGGGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | TTGCTCCCAGAACTACCCATCATCCAGGGAATGGCATaGGTGGGTATATTACTGCAGAACCCCCTCTATGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLPELPIIQGMA*VGILLQNPLYD Trigger: GTCATAGAGGGGGTTCTGCAGTAATATACCCACCCATGCCATTCCCTGGATGATGGGTAGTTCTGGGAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | CCCCTCTCCCTGCCTCCACAATGCACTTTTGTGGTGTaGATTCTACAATCTGCTTCCCAGCAGGACTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLSLPPQCTFVV*ILQSASQQDFR Trigger: TCTAAAGTCCTGCTGGGAAGCAGATTGTAGAATCCACACCACAAAAGTGCATTGTGGAGGCAGGGAGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | CTGAACTGCATCCGATGCTCTGTGGCATTTCTGAAATaGCCCTCTCTGCCTTGGGTACTGGTTTCACACCAA | + |
|
Preference number: 3 (lower is better) Translates to: LNCIRCSVAFLK*PSLPWVLVSHQ Trigger: TTGGTGTGAAACCAGTACCCAAGGCAGAGAGGGCCATTTCAGAAATGCCACAGAGCATCGGATGCAGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| 3UTR TCA 72 bp | TCCAGGACTCTAAATACTGGCAAAGGCACCGGAAGCTaGAGTTCAGTACAAACAGTGGAGTCCTGGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: SRTLNTGKGTGS*SSVQTVESWAL Trigger: AAGTGCCCAGGACTCCACTGTTTGTACTGAACTTCAGCTTCCGGTGCCTTTGCCAGTATTTAGAGTCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | AGCAGACATGTTAAGAGGCGAGGACCACATGGAGACTaGGCAAATGGGCTGGAGATGGAATGTTGGATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SRHVKRRGPHGD*ANGLEMECWIA Trigger: TGCTATCCAACATTCCATCTCCAGCCCATTTGCTCAGTCTCCATGTGGTCCTCGCCTCTTAACATGTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | GACCATACAAAATGCCAGGCATGGAGGGAACTCTCATaGAGGACACAACACGTCACTGCTGTTTGCATTCGT | + |
|
Preference number: 3 (lower is better) Translates to: DHTKCQAWRELS*RTQHVTAVCIR Trigger: ACGAATGCAAACAGCAGTGACGTGTTGTGTCCTCCATGAGAGTTCCCTCCATGCCTGGCATTTTGTATGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | TGGCTTCTTTCCAGCTATGAATGTTGCCACCCTGGGTaGTGCCGAGTCCTTATTGAACAGAGACAAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WLLSSYECCHPG*CRVLIEQRQTA Trigger: TGCTGTTTGTCTCTGTTCAATAAGGACTCGGCACCACCCAGGGTGGCAACATTCATAGCTGGAAAGAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | TGGGCATCTCAAGCTTTCATCCTTTCTACCCTTCTCTaGCTTCTTTCCAGCTATGAATGTTGCCACCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: WASQAFILSTLL*LLSSYECCHPG Trigger: CCCAGGGTGGCAACATTCATAGCTGGAAAGAAGCCAGAGAAGGGTAGAAAGGATGAAAGCTTGAGATGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | ATAGCTCTTGCAGATAGGTATAGGGATGCTGTTGGGTaGCCTGGAAGGGCAGAATCAGGACTCTCAACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: IALADRYRDAVG*PGRAESGLSTV Trigger: AACAGTTGAGAGTCCTGATTCTGCCCTTCCAGGCCACCCAACAGCATCCCTATACCTATCTGCAAGAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | GAGAGTACAGAGGTGTGGCTGAGCTGTACTGTGCCCTaGAGTAAACTAGTACTTGCAGAACAAACCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ESTEVWLSCTVP*SKLVLAEQTSA Trigger: AGCAGAGGTTTGTTCTGCAAGTACTAGTTTACTCCAGGGCACAGTACAGCTCAGCCACACCTCTGTACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | AAAATACTTCTGCCATTCATTACCCAGGATTCAACACCCAGGTACCGTGAAGGGCGCTTCCCCTTGCCTTaGTCACCATTGGTTACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KILLPFITQDSTPRYREGRFPLP*SPLVTA Trigger: TGCTGTAACCAATGGTGACAAAGGCAAGGGGAAGCG...CCCTTCACGGTACCTGGGTGTTGAATCCTGGGTAATGAATGGCAGAAGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGCAAATCTGATGATATGGATTCCCAGGGAGGATTTCCCTCGGGGTCTCCTGGTGCCGAGTCCTTATaGAACAGAGACAAACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CSKSDDMDSQGGFPSGSPGAESL*NRDKQQ Trigger: TTGCTGTTTGTCTCTGTTCAATAAGGACTCGGCACC...AGGAGACCCCGAGGGAAATCCTCCCTGGGAATCCATATCATCAGATTTGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | GCCCCACCCCCATCCCAGTATGAGGGCATGACAACCTaGGAAATCTTTACCAAATCCTCTTACACTGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: APPPSQYEGMTT*EIFTKSSYTGF Trigger: AAATCCAGTGTAAGAGGATTTGGTAAAGATTTCTCAGGTTGTCATGCCCTCATACTGGGATGGGGGTGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | TCCCAGAACTACCCATCATCCAGGGAATGGCATGGGTaGGTATATTACTGCAGAACCCCCTCTATGACTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQNYPSSREWHG*VYYCRTPSMTY Trigger: ATAAGTCATAGAGGGGGTTCTGCAGTAATATACCCACCCATGCCATTCCCTGGATGATGGGTAGTTCTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | CAGATGCTTCAGGGAACTGAGATGCAGCGGATCTGGTaGTCTGCTACTGTAGTAGTCATAATGTTGACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QMLQGTEMQRIW*SATVVVIMLTG Trigger: ACCTGTCAACATTATGACTACTACAGTAGCAGACCACCAGATCCGCTGCATCTCAGTTCCCTGAAGCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | AATTCATCTCTTCACGGCTGTCAGATACATCTGAGTTaGGACAGGGCTCAGTCCCAAGCCACTGTAGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: NSSLHGCQIHLS*DRAQSQATVAN Trigger: ATTTGCTACAGTGGCTTGGGACTGAGCCCTGTCCCAACTCAGATGTATCTGACAGCCGTGAAGAGATGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | AAAATACTTCTGCCATTCATTACCCAGGATTCAACACCCAGGTACCGTGAAGGGGGTGTGTGGTGGCCCTaGTCTCTTCTTGACTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KILLPFITQDSTPRYREGGVWWP*SLLDFY Trigger: ATAGAAGTCAAGAAGAGACAAGGGCCACCACACACC...CCCTTCACGGTACCTGGGTGTTGAATCCTGGGTAATGAATGGCAGAAGTATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATAATAATAATGATGGCAAGAACTGGGCCACTTAATGGGTCTTTCTTTTGTCCCCCTGCCTCCTaGGAATGCAGTGGCAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: TQIIIMMARTGPLNGSFFCPPAS*ECSGSS Trigger: ACTGCTGCCACTGCATTCCAAGGAGGCAGGGGGACA...AAAGAAAGACCCATTAAGTGGCCCAGTTCTTGCCATCATTATTATTATCTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | GGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTGCTTTCTGCTACACGTCACTGCTGTTaGCATTCGTATCCCATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GTYGYLQATREPMHLLSATRHCC*HSYPIK Trigger: CTTAATGGGATACGAATGCAAACAGCAGTGACGTGT...AGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | ACTAATGGAATGTCTGTACTTGCAATTGGTCACTGCTaGAGGCTCTCCCCGGGAACATTCCAGGACTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TNGMSVLAIGHC*RLSPGTFQDSK Trigger: TTTAGAGTCCTGGAATGTTCCCGGGGAGAGCCTTCAGCAGTGACCAATTGCAAGTACAGACATTCCATTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | GTACAGATGCTTCAGGGAACTGAGATGCAGCGGATCTaGTGGTCTGCTACTGTAGTAGTCATAATGTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: VQMLQGTEMQRI*WSATVVVIMLT Trigger: TGTCAACATTATGACTACTACAGTAGCAGACCACCAGATCCGCTGCATCTCAGTTCCCTGAAGCATCTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | AATTCCAGTGTAAAGTATTATCGGGTGAGGTTGGAATaGAAGCACGCAGCCCTCACATATCTCAAAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NSSVKYYRVRLE*KHAALTYLKGC Trigger: GCAGCCTTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACCTCACCCGATAATACTTTACACTGGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | CTACTGTGTACAGCAGGCACAGCACAAAGGGGAGAGTaGGTTCAAGAGAAGACAAGCAACAACAAACACAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLCTAGTAQRGE*VQEKTSNNKHN Trigger: ATTGTGTTTGTTGTTGCTTGTCTTCTCTTGAACTCACTCTCCCCTTTGTGCTGTGCCTGCTGTACACAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | TCCTACCGGAGATATATGATGAAATTTGAGCATCCTTaGTCCCAGAACTACCCATCATCCAGGGAATGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SYRRYMMKFEHP*SQNYPSSREWH Trigger: ATGCCATTCCCTGGATGATGGGTAGTTCTGGGAGCAAGGATGCTCAAATTTCATCATATATCTCCGGTAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | AGCATGTCGATATCCTCACATTTAGACCATACAAAATaGCAGGCATGGAGGGAACTCTCATGGAGGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: SMSISSHLDHTK*QAWRELSWRTQ Trigger: TTGTGTCCTCCATGAGAGTTCCCTCCATGCCTGGCATTTTGTATGGTCTAAATGTGAGGATATCGACATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CCA 72 bp | ATATCCTCACATTTAGACCATACAAAATGCCAGGCATaGAGGGAACTCTCATGGAGGACACAACACGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: ISSHLDHTKCQA*RELSWRTQHVT Trigger: AGTGACGTGTTGTGTCCTCCATGAGAGTTCCCTCCATGCCTGGCATTTTGTATGGTCTAAATGTGAGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | GGCATGGGTGGGTATATTACTGCAGAACCCCCTCTATaGCTTATCCCACAAAGCTGGACAAACAAACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GMGGYITAEPPL*LIPQSWTNKQK Trigger: TTTTTGTTTGTTTGTCCAGCTTTGTGGGATAAGTCATAGAGGGGGTTCTGCAGTAATATACCCACCCATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | GGGGTTAAAGTTGAGTATAGAACTGATCTGTTGTTCTaGGAACAACAGGGGATCCTCTCATTTCAAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GVKVEYRTDLLF*EQQGILSFQGR Trigger: CCTGCCTTGAAATGAGAGGATCCCCTGTTGTTCTCAGAACAACAGATCAGTTCTATACTCAACTTTAACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | GTACGTACGGATATTTACAGGCAACAAGGGAGCCCATaGATTTGCTTTCTGCTTGTAACAGCTCTTATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VRTDIYRQQGSP*ICFLLVTALIV Trigger: AACTATAAGAGCTGTTACAAGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATAATAATAATGATGGCAAGAACTGGGCCACTTAATGGGTCTTTCTTTTGTGGTGAGCTGGCCTaGAAAGCTATAAGAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TQIIIMMARTGPLNGSFFCGELA*KAIRGE Trigger: CTCACCTCTTATAGCTTTCAAGGCCAGCTCACCACA...AAAGAAAGACCCATTAAGTGGCCCAGTTCTTGCCATCATTATTATTATCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR GCA 72 bp | ACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTaGTTTCTGCTTGTAACAGCTCTTATAGTTTTATGT | + |
|
Preference number: 3 (lower is better) Translates to: TDIYRQQGSPCI*FLLVTALIVLC Trigger: ACATAAAACTATAAGAGCTGTTACAAGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGAAGAAAACAGGAAGGGATTGCCAACATTCATCAGCAAGTGTTATCAATAGTGTGAATGAAACCTaGTACATAGTGAAGTCGCGT | + |
|
Preference number: 3 (lower is better) Translates to: EMKKTGRDCQHSSASVINSVNET*YIVKSR Trigger: ACGCGACTTCACTATGTACAAGGTTTCATTCACACT...ATTGATAACACTTGCTGATGAATGTTGGCAATCCCTTCCTGTTTTCTTCATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| 3UTR CCA 72 bp | AGAATAAGCTATTATGAAGCTTATGTGACCCATGTTTaGGGCCAACAACTATCAAATATAGCAGTTTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RISYYEAYVTHV*GQQLSNIAVCP Trigger: TGGGCAAACTGCTATATTTGATAGTTGTTGGCCCCAAACATGGGTCACATAAGCTTCATAATAGCTTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | CAACAACAAACACAATTCTTGAAAATTAATCTTCTGTaGAAGACAACTTGGGGTGAAGGACTTGGTCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QQQTQFLKINLL*KTTWGEGLGPV Trigger: AACAGGACCAAGTCCTTCACCCCAAGTTGTCTTTCACAGAAGATTAATTTTCAAGAATTGTGTTTGTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR TCA 72 bp | GCCTCTCAAATAGCGCTCTGGCTTGGAAGGAATATATaGGATAGTCAGAGAGTTAAATCAAACAAAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASQIALWLGRNI*DSQRVKSNKTK Trigger: TTTTGTTTTGTTTGATTTAACTCTCTGACTATCTCATATATTCCTTCCAAGCCAGAGCGCTATTTGAGAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| 3UTR CCA 72 bp | AGTGTCAAAGAAAACTCTCGGTACAACCCTAACTATTaGAAAACAATCACAGGGAATCCTAGAACATTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SVKENSRYNPNY*KTITGNPRTLV Trigger: AACTAATGTTCTAGGATTCCCTGTGATTGTTTTCCAATAGTTAGGGTTGTACCGAGAGTTTTCTTTGACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCCAACATTCATCAGCAAGTGTTATCAATGACTGGTTCTGTAATTCAGATTCTTAGAAAAGAATGGTaGACGATGAGAAGATACTCC | + |
|
Preference number: 3 (lower is better) Translates to: IANIHQQVLSMTGSVIQILRKEW*TMRRYS Trigger: GGAGTATCTTCTCATCGTCAACCATTCTTTTCTAAG...AATCTGAATTACAGAACCAGTCATTGATAACACTTGCTGATGAATGTTGGCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| 3UTR GCA 72 bp | TATATTCCCGAGTGGAAGAAACCCACATATTTCATCTaGTGTAACATGACTACTGTAGTAACAGTTTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: YIPEWKKPTYFI*CNMTTVVTVYS Trigger: ACTATAAACTGTTACTACAGTAGTCATGTTACAGCAGATGAAATATGTGGGTTTCTTCCACTCGGGAATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 72 bp | ATGCTATCCCCAGGGTTTGAACTCAGGGTCCCAGGCTaGCGTGGTAGGTGCCTTTACTGGAGGAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: MLSPGFELRVPG*RGRCLYWRSHL Trigger: GAGGTGGCTCCTCCAGTAAAGGCACCTACCACGCAAGCCTGGGACCCTGAGTTCAAACCCTGGGGATAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 72 bp | CACAAGCACACAGAGGCTTGCCGCTTCCCCTTGCCTTaGTCACCATTGGTTACAGCAGTCCGCTCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HKHTEACRFPLP*SPLVTAVRSSP Trigger: AGGAGAGGAGCGGACTGCTGTAACCAATGGTGACAAAGGCAAGGGGAAGCGGCAAGCCTCTGTGTGCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 72 bp | CTGGTCCTGCTCCAGCCTCTCTCTCAGGTGCTAGGTTaGCAGATGTGTGCCACAACAGCTGGGCAAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLLQPLSQVLG*QMCATTAGQGV Trigger: AACACCTTGCCCAGCTGTTGTGGCACACATCTGCAAACCTAGCACCTGAGAGAGAGGCTGGAGCAGGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCTCCAGCCTCTCTCTCAGGTGCTAGGTTTGCAGATGTGTGCCACAACAGCGTCAATCTGTGCGACTaGCTTTCCAGTGGCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PAPASLSGARFADVCHNSVNLCD*LSSGCY Trigger: GTAGCAGCCACTGGAAAGCCAGTCGCACAGATTGAC...GCTGTTGTGGCACACATCTGCAAACCTAGCACCTGAGAGAGAGGCTGGAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR TCA 90 bp | GATCCTAGCCAGTACAGATGCTTCAGGGAACTGAGATGCAGCGGATCTGGTGGTGGTCCATTAGAGGGCTaGAGACCACCAGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPSQYRCFRELRCSGSGGGPLEG*RPPAPF Trigger: GAAAGGAGCTGGTGGTCTTCAGCCCTCTAATGGACC...ACCACCAGATCCGCTGCATCTCAGTTCCCTGAAGCATCTGTACTGGCTAGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 72 bp | ATGGCTTTGCCTTTAAGTTTCCCTCCGTGCTCTCCATaGCCAATCTCGGTGATGGACAGCTGGCCAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MALPLSFPPCSP*PISVMDSWPRE Trigger: CTCCCTTGGCCAGCTGTCCATCACCGAGATTGGCAATGGAGAGCACGGAGGGAAACTTAAAGGCAAAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR GCA 90 bp | AGCACAGCATCGCAGTGTAGCTTTGTAGCTGTCAACCCTGGCAGAGAGGCTACTAGGAAAGTTGTGCTTTaGCGCCTCCAGGACACAACG | + |
|
Preference number: 4 (lower is better) Translates to: STASQCSFVAVNPGREATRKVVL*RLQDTT Trigger: CGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCT...AGTAGCCTCTCTGCCAGGGTTGACAGCTACAAAGCTACACTGCGATGCTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR GCA 90 bp | AGCACAGCATCGCAGTGTAGCTTTGTAGCTGTCAACCCTGGCAGAGAGGCTACTTGGCTTTCCAGTGGCTaGTACACAAACGGCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: STASQCSFVAVNPGREATWLSSG*YTNGCY Trigger: GTAGCAGCCGTTTGTGTAGCAGCCACTGGAAAGCCA...AGTAGCCTCTCTGCCAGGGTTGACAGCTACAAAGCTACACTGCGATGCTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR GCA 90 bp | AACTCAGTGTCGCCAAGGCTGACTTTAAACTCCTGGTCCTGCTCCAGCCTCTCTTGGCTTTCCAGTGGCTaGTACACAAACGGCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NSVSPRLTLNSWSCSSLSWLSSG*YTNGCY Trigger: GTAGCAGCCGTTTGTGTAGCAGCCACTGGAAAGCCA...AGAGAGGCTGGAGCAGGACCAGGAGTTTAAAGTCAGCCTTGGCGACACTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CCA 90 bp | AGCACAGCATCGCAGTGTAGCTTTGTAGCTGTCAACCCTGGCAGAGAGGCTACTGTCAATCTGTGCGACTaGCTTTCCAGTGGCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: STASQCSFVAVNPGREATVNLCD*LSSGCY Trigger: GTAGCAGCCACTGGAAAGCCAGTCGCACAGATTGAC...AGTAGCCTCTCTGCCAGGGTTGACAGCTACAAAGCTACACTGCGATGCTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGCAGGTCTCAAACTCAGTGTCGCCAAGGCTGACTTTAAACTCCTGGTCCACGGACTTGAAGGGTaGAGGGTTTGCATCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: AQAGLKLSVAKADFKLLVHGLEG*RVCISI Trigger: AATGCTGATGCAAACCCTCCACCCTTCAAGTCCGTG...GACCAGGAGTTTAAAGTCAGCCTTGGCGACACTGAGTTTGAGACCTGCCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR TCA 90 bp | GGTCAGCTAGGGGAAGCCATGGTTGTGAATGTCAGGAGCCTCTCAAATAGCGCTCAGCTCCTTTCTCCTTaGACTGAGTCTGCAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLGEAMVVNVRSLSNSAQLLSP*TESAKA Trigger: TGCCTTTGCAGACTCAGTTCAAGGAGAAAGGAGCTG...AGCGCTATTTGAGAGGCTCCTGACATTCACAACCATGGCTTCCCCTAGCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| CDS-3UTR TCA 90 bp | TCATCTCTTCACGGCTGTCAGATACATCTGAGTTGGGACAGGGCTCAGTCCCAAAGGGGGCACATGCGCTaGGTTCCATCTTCTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSLHGCQIHLSWDRAQSQRGHMR*VPSSCI Trigger: AATGCAAGAAGATGGAACTCAGCGCATGTGCCCCCT...TTGGGACTGAGCCCTGTCCCAACTCAGATGTATCTGACAGCCGTGAAGAGATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGGAAACGAGCTAATTGGGTCAGTGGAACACAAGTCTGCAGCAACAGGGAATGTTCTCGTGGGTTaGTGTAGAGTCTCTCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVGNELIGSVEHKSAATGNVLVG*CRVSRG Trigger: ACCCCGAGAGACTCTACATCAACCCACGAGAACATT...CCCTGTTGCTGCAGACTTGTGTTCCACTGACCCAATTAGCTCGTTTCCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | GGTCAGCTAGGGGAAGCCATGGTTGTGAATGTCAGGAGCCTCTCAAATAGCGCTTTACTTACAGAGGGCTaGAGACCACCAGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLGEAMVVNVRSLSNSALLTEG*RPPAPF Trigger: GAAAGGAGCTGGTGGTCTTCAGCCCTCTGTAAGTAA...AGCGCTATTTGAGAGGCTCCTGACATTCACAACCATGGCTTCCCCTAGCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTCATGTCTAACTCTGGCACACAAGCAGACTCAAATCCCCTCTCTGTCCTGGTCAATCTGTGCGACTaGCTTTCCAGTGGCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QLMSNSGTQADSNPLSVLVNLCD*LSSGCY Trigger: GTAGCAGCCACTGGAAAGCCAGTCGCACAGATTGAC...CAGGACAGAGAGGGGATTTGAGTCTGCTTGTGTGCCAGAGTTAGACATGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CCA 90 bp | GCAATGGGGTCTCCAGTAGCCCAGGCAGGTCTCAAACTCAGTGTCGCCAAGGCTTGGCTTATGTGTAGGTaGAAGGTCGATTACTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AMGSPVAQAGLKLSVAKAWLMCR*KVDYFV Trigger: GACAAAGTAATCGACCTTCCACCTACACATAAGCCA...AGCCTTGGCGACACTGAGTTTGAGACCTGCCTGGGCTACTGGAGACCCCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGCAGGTCTCAAACTCAGTGTCGCCAAGGCTGACTTTAAACTCCTGGTCCTGAGCATTTCCAAGTaGGAATGTAACGGCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQAGLKLSVAKADFKLLVLSISK*ECNGFA Trigger: TGCAAAGCCGTTACATTCCCACTTGGAAATGCTCAG...GACCAGGAGTTTAAAGTCAGCCTTGGCGACACTGAGTTTGAGACCTGCCTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CCA 90 bp | ACATCAAGATTCAGCACTGGGGGATTAGGGCATGGACAAAGCAAAAGGAGCTGGACGGTAAAGGATACCTaGGTGAGTACAGCACGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSRFSTGGLGHGQSKRSWTVKDT*VSTARA Trigger: GGCTCGTGCTGTACTCACCCAGGTATCCTTTACCGT...CCAGCTCCTTTTGCTTTGTCCATGCCCTAATCCCCCAGTGCTGAATCTTGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| 3UTR CAA 72 bp | CATGTGCATGAGGTGTGTGGTGGCCCTTGTCTCTTCTaGACTTCTATGCTATCCCCAGGGTTTGAACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVHEVCGGPCLF*TSMLSPGFELR Trigger: CCTGAGTTCAAACCCTGGGGATAGCATAGAAGTCAAGAAGAGACAAGGGCCACCACACACCTCATGCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | TCGCCAAGGCTGACTTTAAACTCCTGGTCCTGCTCCAGCCTCTCTCTCAGGTGCAAACGCCAGAATAATTaGCAGTCAATGGATGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SPRLTLNSWSCSSLSLRCKRQNN*QSMDGQ Trigger: TTGTCCATCCATTGACTGTCAATTATTCTGGCGTTT...GCACCTGAGAGAGAGGCTGGAGCAGGACCAGGAGTTTAAAGTCAGCCTTGGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR TCA 90 bp | TCATCTCTTCACGGCTGTCAGATACATCTGAGTTGGGACAGGGCTCAGTCCCAACCTTTCTCCTTGAACTaGGTCTGCAAAGGCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLHGCQIHLSWDRAQSQPFSLN*VCKGKC Trigger: ACACTTGCCTTTGCAGACTCAGTTCAAGGAGAAAGG...TTGGGACTGAGCCCTGTCCCAACTCAGATGTATCTGACAGCCGTGAAGAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | TGTAGCAAATCTGATGATATGGATTCCCAGGGAGGATTTCCCTCGGGGTCTCCTCAGCTCCTTTCTCCTTaGACTGAGTCTGCAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSKSDDMDSQGGFPSGSPQLLSP*TESAKA Trigger: TGCCTTTGCAGACTCAGTTCAAGGAGAAAGGAGCTG...AGGAGACCCCGAGGGAAATCCTCCCTGGGAATCCATATCATCAGATTTGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR GCA 90 bp | CCTGGTCCTGCTCCAGCCTCTCTCTCAGGTGCTAGGTTTGCAGATGTGTGCCACTTGGCTGACAATCGTTaGTGTTTCATTAGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGPAPASLSGARFADVCHLADNR*CFIRKR Trigger: TCTTTTCCTAATGAAACAGCAACGATTGTCAGCCAA...GTGGCACACATCTGCAAACCTAGCACCTGAGAGAGAGGCTGGAGCAGGACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR GCA 90 bp | AGCACAGCATCGCAGTGTAGCTTTGTAGCTGTCAACCCTGGCAGAGAGGCTACTTATAAAGGGGGCACATaGGCTGAGTTCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STASQCSFVAVNPGREATYKGGT*AEFHLL Trigger: AAGAAGATGGAACTCAGCGCATGTGCCCCCTTTATA...AGTAGCCTCTCTGCCAGGGTTGACAGCTACAAAGCTACACTGCGATGCTGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CCA 90 bp | GCTGACTTTAAACTCCTGGTCCTGCTCCAGCCTCTCTCTCAGGTGCTAGGTTTGCTCGAGCAAATCTTGTaGGAAACAGCTTGTATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADFKLLVLLQPLSQVLGLLEQIL*ETACIG Trigger: GCCAATACAAGCTGTTTCCCACAAGATTTGCTCGAG...CAAACCTAGCACCTGAGAGAGAGGCTGGAGCAGGACCAGGAGTTTAAAGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR TCA 90 bp | GCCCAGGCAGGTCTCAAACTCAGTGTCGCCAAGGCTGACTTTAAACTCCTGGTCATCATATCCTGTTACTaGAACTTCAGGAGCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: AQAGLKLSVAKADFKLLVIISCY*NFRSIL Trigger: CAGTATGCTCCTGAAGTTTCAGTAACAGGATATGAT...GACCAGGAGTTTAAAGTCAGCCTTGGCGACACTGAGTTTGAGACCTGCCTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CCA 90 bp | GAACTACCCATCATCCAGGGAATGGCATGGGTGGGTATATTACTGCAGAACCCCCTCGAGCAAATCTTGTaGGAAACAGCTTGTATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELPIIQGMAWVGILLQNPLEQIL*ETACIG Trigger: GCCAATACAAGCTGTTTCCCACAAGATTTGCTCGAG...GGGGTTCTGCAGTAATATACCCACCCATGCCATTCCCTGGATGATGGGTAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CCA 90 bp | GGTGCTAGGTTTGCAGATGTGTGCCACAACAGCTGGGCAAGGTGTTTAGAAGCTTTCATATACAGGGGGTaGCTTATGTGTAGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GARFADVCHNSWARCLEAFIYRG*LMCRWK Trigger: CTTCCACCTACACATAAGCCACCCCCTGTATATGAA...AGCTTCTAAACACCTTGCCCAGCTGTTGTGGCACACATCTGCAAACCTAGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGGCATTTCTGAAATGGCCCTCTCTGCCTTGGGTACTGGTTTCACACCATTCATATACAGGGGGTaGCTTATGTGTAGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCGISEMALSALGTGFTPFIYRG*LMCRWK Trigger: CTTCCACCTACACATAAGCCACCCCCTGTATATGAA...TGGTGTGAAACCAGTACCCAAGGCAGAGAGGGCCATTTCAGAAATGCCACAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| 3UTR CAA 72 bp | GCTGAAGTTCAGTACAAACAGTGGAGTCCTGGGCACTaGTCAGTTTGGAGAGAAGTTAGTTTCTCACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AEVQYKQWSPGH*SVWREVSFSPT Trigger: GGTGGGTGAGAAACTAACTTCTCTCCAAACTGACAAGTGCCCAGGACTCCACTGTTTGTACTGAACTTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | AGCACAGCATCGCAGTGTAGCTTTGTAGCTGTCAACCCTGGCAGAGAGGCTACTATGTATCTTCTCCCATaGGATCTGGGTTATAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STASQCSFVAVNPGREATMYLLP*DLGYSF Trigger: GAAACTATAACCCAGATCTCATGGGAGAAGATACAT...AGTAGCCTCTCTGCCAGGGTTGACAGCTACAAAGCTACACTGCGATGCTGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCAGGTGCTAGGTTTGCAGATGTGTGCCACAACAGCTGGGCAAGGTGTTACTGTATGTCTAGTATaGAAGAGTAGCGAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQVLGLQMCATTAGQGVTVCLV*KSSECP Trigger: AGGACATTCGCTACTCTTTCATACTAGACATACAGT...AACACCTTGCCCAGCTGTTGTGGCACACATCTGCAAACCTAGCACCTGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCCAAACAAAGCAGCTGAAAGCTCACTGGTGATCTACGGACCTACAACCCGTAAGCGGGATGTCTaGAATGTAGATAACCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPNKAAESSLVIYGPTTRKRDV*NVDNLL Trigger: CAAAAGGTTATCTACATTTCAGACATCCCGCTTACG...GGTTGTAGGTCCGTAGATCACCAGTGAGCTTTCAGCTGCTTTGTTTGGCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGTGTTAGTAGCTAAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGCAGCTCCTTTCTCCTTaGACTGAGTCTGCAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQVLVAKLQSYREVKLQVQLLSP*TESAKA Trigger: TGCCTTTGCAGACTCAGTTCAAGGAGAAAGGAGCTG...CACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTTAGCTACTAACACTTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023335.13 ENSMUST00000121803.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGTGTTAGTAGCTAAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGGCAAGTGTTCAGTCGTaGGTTGCCTACAAAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQVLVAKLQSYREVKLQVASVQS*VAYKAS Trigger: TGAGGCTTTGTAGGCAACTCACGACTGAACACTTGC...CACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTTAGCTACTAACACTTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGCCATCTTATTCCCCACCCCCATCAGTGCAGCCTTGTGAGACAGAGAACCCTGAGGATGATGAACTaGAACAGTCTGTGTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSHLIPHPHQCSLVRQRTLRMMN*NSLCTF Trigger: AAAAGTACACAGACTGTTGCAGTTCATCATCCTCAG...GGTTCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGGAATAAGATGGCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR GCA 90 bp | GGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTGCTTTCTGCTGAAGGGTGGAGGGTTTaGATCAGCATTACACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTYGYLQATREPMHLLSAEGWRV*ISITLE Trigger: CTCAAGTGTAATGCTGATGCAAACCCTCCACCCTTC...AGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CCA 90 bp | CAGCTCATGTCTAACTCTGGCACACAAGCAGACTCAAATCCCCTCTCTGTCCTGTTATCAGGCTCACTGTaGGTTCAACTAACACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLMSNSGTQADSNPLSVLLSGSL*VQLTQS Trigger: TGACTGTGTTAGTTGAACCCACAGTGAGCCTGATAA...CAGGACAGAGAGGGGATTTGAGTCTGCTTGTGTGCCAGAGTTAGACATGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGTGTTAGTAGCTAAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGCACGGACTTGAAGGGTaGAGGGTTTGCATCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GQVLVAKLQSYREVKLQVHGLEG*RVCISI Trigger: AATGCTGATGCAAACCCTCCACCCTTCAAGTCCGTG...CACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTTAGCTACTAACACTTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCCAAACAAAGCAGCTGAAAGCTCACTGGTGATCTACGGACCTACAACCTGGCTTATGTGTAGGTaGAAGGTCGATTACTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPNKAAESSLVIYGPTTWLMCR*KVDYFV Trigger: GACAAAGTAATCGACCTTCCACCTACACATAAGCCA...GGTTGTAGGTCCGTAGATCACCAGTGAGCTTTCAGCTGCTTTGTTTGGCAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGGCATTTCTGAAATGGCCCTCTCTGCCTTGGGTACTGGTTTCACACCATGGCTTATGTGTAGGTaGAAGGTCGATTACTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCGISEMALSALGTGFTPWLMCR*KVDYFV Trigger: GACAAAGTAATCGACCTTCCACCTACACATAAGCCA...TGGTGTGAAACCAGTACCCAAGGCAGAGAGGGCCATTTCAGAAATGCCACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTCATGTCTAACTCTGGCACACAAGCAGACTCAAATCCCCTCTCTGTCCTGATCATATCCTGTTACTaGAACTTCAGGAGCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: QLMSNSGTQADSNPLSVLIISCY*NFRSIL Trigger: CAGTATGCTCCTGAAGTTTCAGTAACAGGATATGAT...CAGGACAGAGAGGGGATTTGAGTCTGCTTGTGTGCCAGAGTTAGACATGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR TCA 90 bp | GAACTACCCATCATCCAGGGAATGGCATGGGTGGGTATATTACTGCAGAACCCCAAACGCCAGAATAATTaGCAGTCAATGGATGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ELPIIQGMAWVGILLQNPKRQNN*QSMDGQ Trigger: TTGTCCATCCATTGACTGTCAATTATTCTGGCGTTT...GGGGTTCTGCAGTAATATACCCACCCATGCCATTCCCTGGATGATGGGTAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR GCA 90 bp | ACACAACTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCGCCGAGGAAAGTTGTaGTTTGCCGCCTCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVVKEPLMMLSNLLLARRGKL*FAASRT Trigger: TGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCG...AGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAGTTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR GCA 90 bp | CAGCTCATGTCTAACTCTGGCACACAAGCAGACTCAAATCCCCTCTCTGTCCTGCTGAGGATGATGAACTaGAACAGTCTGTGTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLMSNSGTQADSNPLSVLLRMMN*NSLCTF Trigger: AAAAGTACACAGACTGTTGCAGTTCATCATCCTCAG...CAGGACAGAGAGGGGATTTGAGTCTGCTTGTGTGCCAGAGTTAGACATGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR GCA 90 bp | GATCCTAGCCAGTACAGATGCTTCAGGGAACTGAGATGCAGCGGATCTGGTGGTGAGAAGCCTATGTTATaGAGAGTAATTGTTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: DPSQYRCFRELRCSGSGGEKPML*RVIVAS Trigger: TGATGCAACAATTACTCTGCATAACATAGGCTTCTC...ACCACCAGATCCGCTGCATCTCAGTTCCCTGAAGCATCTGTACTGGCTAGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR GCA 90 bp | CAGCTCATGTCTAACTCTGGCACACAAGCAGACTCAAATCCCCTCTCTGTCCTGATCTGTGATTCTTTCTaGATGTCTGATGGTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QLMSNSGTQADSNPLSVLICDSF*MSDGGM Trigger: CATTCCACCATCAGACATGCAGAAAGAATCACAGAT...CAGGACAGAGAGGGGATTTGAGTCTGCTTGTGTGCCAGAGTTAGACATGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGGGACAGTGCTAAGGACAGGACAAAAGGCTTCCAAATCCTTTTCTCTGCACATAATGTTCTCGTaGGTTGATGTAGAGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGTVLRTGQKASKSFSLHIMFS*VDVESL Trigger: GAGAGACTCTACATCAACCCACGAGAACATTATGTG...CAGAGAAAAGGATTTGGAAGCCTTTTGTCCTGTCCTTAGCACTGTCCCAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGTGTTAGTAGCTAAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGACTGTTGTAGAGGACTaGGCATTTCCAAGTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GQVLVAKLQSYREVKLQVTVVED*AFPSGN Trigger: ATTCCCACTTGGAAATGCTCAGTCCTCTACAACAGT...CACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTTAGCTACTAACACTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | CAGCTCATGTCTAACTCTGGCACACAAGCAGACTCAAATCCCCTCTCTGTCCTGTTCTTTCTGCATGTCTaGTGGTGGAATGTAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLMSNSGTQADSNPLSVLFFLHV*WWNVVF Trigger: AAAAACTACATTCCACCATCAGACATGCAGAAAGAA...CAGGACAGAGAGGGGATTTGAGTCTGCTTGTGTGCCAGAGTTAGACATGAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCTGATTGGTCCATTAGAGGGCTaGAGACCACCAGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVVKEPLMMLSNLLLALIGPLEG*RPPAPF Trigger: GAAAGGAGCTGGTGGTCTTCAGCCCTCTAATGGACC...AATCAGAGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR TCA 90 bp | ACACAACTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTGGTCCATTAGAGGGCTaGAGACCACCAGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVVKEPLMMLSNLLLAGPLEG*RPPAPF Trigger: GAAAGGAGCTGGTGGTCTTCAGCCCTCTAATGGACC...AGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAGTTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAAGTGTTAGTAGCTAAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGTATAAAGGGGGCACATaGGCTGAGTTCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQVLVAKLQSYREVKLQVYKGGT*AEFHLL Trigger: AAGAAGATGGAACTCAGCGCATGTGCCCCCTTTATA...CACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTTAGCTACTAACACTTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023335.13 ENSMUST00000121803.8 |
||
| CDS-3UTR CCA 90 bp | GGTACGTACGGATATTTACAGGCAACAAGGGAGCCCATGCATTTGCTTTCTGCTTTATCAGGCTCACTGTaGGTTCAACTAACACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTYGYLQATREPMHLLSALSGSL*VQLTQS Trigger: TGACTGTGTTAGTTGAACCCACAGTGAGCCTGATAA...AGCAGAAAGCAAATGCATGGGCTCCCTTGTTGCCTGTAAATATCCGTACGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGTGTTAGTAGCTAAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGTTCATATACAGGGGGTaGCTTATGTGTAGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQVLVAKLQSYREVKLQVFIYRG*LMCRWK Trigger: CTTCCACCTACACATAAGCCACCCCCTGTATATGAA...CACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTTAGCTACTAACACTTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 72 bp | CGTCTGGGCACTGAAGCGAGGGAATTTAAGGGAATTTaGCACTTATGTCGAGAATATGTGAGAGTACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLGTEAREFKGI*HLCREYVRVQR Trigger: CCTCTGTACTCTCACATATTCTCGACATAAGTGCAAAATTCCCTTAAATTCCCTCGCTTCAGTGCCCAGACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | ATTCACTTCAAATTTTGCAATGGGGTCTCCAGTAGCCCAGGCAGGTCTCAAACTCGTAAGCGGGATGTCTaGAATGTAGATAACCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHFKFCNGVSSSPGRSQTRKRDV*NVDNLL Trigger: CAAAAGGTTATCTACATTTCAGACATCCCGCTTACG...AGTTTGAGACCTGCCTGGGCTACTGGAGACCCCATTGCAAAATTTGAAGTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCTGATTAGGGGGCACATGCGCTaGGTTCCATCTTCTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LVVKEPLMMLSNLLLALIRGHMR*VPSSCI Trigger: AATGCAAGAAGATGGAACTCAGCGCATGTGCCCCCT...AATCAGAGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR TCA 90 bp | ACACAACTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTAGGGGGCACATGCGCTaGGTTCCATCTTCTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVVKEPLMMLSNLLLARGHMR*VPSSCI Trigger: AATGCAAGAAGATGGAACTCAGCGCATGTGCCCCCT...AGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAGTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTGTACCAAAGCCACATTCACAAAACAACTGAACAATTTTCTTCCAGAGATCGCCGAGGAAAGTTGTaGTTTGCCGCCTCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FVYQSHIHKTTEQFSSRDRRGKL*FAASRT Trigger: TGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCG...ATCTCTGGAAGAAAATTGTTCAGTTGTTTTGTGAATGTGGCTTTGGTACACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| 3UTR CAA 72 bp | ATGCTTATTATACTAATGGAATGTCTGTACTTGCAATaGGTCACTGCTGAAGGCTCTCCCCGGGAACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLIILMECLYLQ*VTAEGSPREHS Trigger: GGAATGTTCCCGGGGAGAGCCTTCAGCAGTGACCAATTGCAAGTACAGACATTCCATTAGTATAATAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | AAAATACTTCTGCCATTCATTACCCAGGATTCAACACCCAGGTACCGTGAAGGGATCATATCCTGTTACTaGAACTTCAGGAGCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: KILLPFITQDSTPRYREGIISCY*NFRSIL Trigger: CAGTATGCTCCTGAAGTTTCAGTAACAGGATATGAT...CCCTTCACGGTACCTGGGTGTTGAATCCTGGGTAATGAATGGCAGAAGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAAGGTCCATTAGAGGGCTaGAGACCACCAGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLEGPLEG*RPPAPF Trigger: GAAAGGAGCTGGTGGTCTTCAGCCCTCTAATGGACC...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCTGATTAATGTTCTCGTGGGTTaGTGTAGAGTCTCTCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVVKEPLMMLSNLLLALINVLVG*CRVSRG Trigger: ACCCCGAGAGACTCTACATCAACCCACGAGAACATT...AATCAGAGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR TCA 90 bp | ACACAACTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTACAAAGCCTCACATCTaGAACTCTCTCCCAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVVKEPLMMLSNLLLATKPHI*NSLPRV Trigger: CACCCTTGGGAGAGAGTTTCAGATGTGAGGCTTTGT...AGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAGTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAAAAGCCACTCTACAGTAATTATGGCAAGGCTCATTTAAATGCAGAGGTATGGCTTTCCAGTGGCTaGTACACAAACGGCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FEKPLYSNYGKAHLNAEVWLSSG*YTNGCY Trigger: GTAGCAGCCGTTTGTGTAGCAGCCACTGGAAAGCCA...TACCTCTGCATTTAAATGAGCCTTGCCATAATTACTGTAGAGTGGCTTTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR TCA 90 bp | TGGCACCTTGTAACTACAAACTGTAACTGTAACCTACAAACGCTGAGGAATTTTCCTTTCTCCTTGAACTaGGTCTGCAAAGGCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WHLVTTNCNCNLQTLRNFPFSLN*VCKGKC Trigger: ACACTTGCCTTTGCAGACTCAGTTCAAGGAGAAAGG...AAAATTCCTCAGCGTTTGTAGGTTACAGTTACAGTTTGTAGTTACAAGGTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| CDS-3UTR TCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAAAGGGGGCACATGCGCTaGGTTCCATCTTCTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLERGHMR*VPSSCI Trigger: AATGCAAGAAGATGGAACTCAGCGCATGTGCCCCCT...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | ATTGCCAACATTCATCAGCAAGTGTTATCAATGACTGGTTCTGTAATTCAGATTAGGAAAGTTGTGCTTTaGCGCCTCCAGGACACAACG | + |
|
Preference number: 4 (lower is better) Translates to: IANIHQQVLSMTGSVIQIRKVVL*RLQDTT Trigger: CGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCT...AATCTGAATTACAGAACCAGTCATTGATAACACTTGCTGATGAATGTTGGCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR GCA 90 bp | AGTAGCCATCACTTTTCTAATTTGTACACAAAGTCTGATCACTCACTCATTTCAAGGAAAGTTGTGCTTTaGCGCCTCCAGGACACAACG | + |
|
Preference number: 4 (lower is better) Translates to: SSHHFSNLYTKSDHSLISRKVVL*RLQDTT Trigger: CGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCT...TGAAATGAGTGAGTGATCAGACTTTGTGTACAAATTAGAAAAGTGATGGCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTAAAGCAGCTCAGATACATTGAACCCAGGTTTTACATTTTCATTTGTCAGCACGGACTTGAAGGGTaGAGGGTTTGCATCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TVKQLRYIEPRFYIFICQHGLEG*RVCISI Trigger: AATGCTGATGCAAACCCTCCACCCTTCAAGTCCGTG...CTGACAAATGAAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGCTTTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| 3UTR CAA 72 bp | AAGATTAATTCCAGTGTAAAGTATTATCGGGTGAGGTaGGAATGGAAGCACGCAGCCCTCACATATCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KINSSVKYYRVR*EWKHAALTYLK Trigger: TTTGAGATATGTGAGGGCTGCGTGCTTCCATTCCAACCTCACCCGATAATACTTTACACTGGAATTAATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAACAGCTCCTTTCTCCTTaGACTGAGTCTGCAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLEQLLSP*TESAKA Trigger: TGCCTTTGCAGACTCAGTTCAAGGAGAAAGGAGCTG...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR TCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAAAATGTTCTCGTGGGTTaGTGTAGAGTCTCTCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLENVLVG*CRVSRG Trigger: ACCCCGAGAGACTCTACATCAACCCACGAGAACATT...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | GAAATGAAGAAAACAGGAAGGGATTGCCAACATTCATCAGCAAGTGTTATCAATGAAGGGTGGAGGGTTTaGATCAGCATTACACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EMKKTGRDCQHSSASVINEGWRV*ISITLE Trigger: CTCAAGTGTAATGCTGATGCAAACCCTCCACCCTTC...ATTGATAACACTTGCTGATGAATGTTGGCAATCCCTTCCTGTTTTCTTCATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCTGATTTATAAAGGGGGCACATaGGCTGAGTTCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVVKEPLMMLSNLLLALIYKGGT*AEFHLL Trigger: AAGAAGATGGAACTCAGCGCATGTGCCCCCTTTATA...AATCAGAGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCTGATTCTGAGCATTTCCAAGTaGGAATGTAACGGCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVVKEPLMMLSNLLLALILSISK*ECNGFA Trigger: TGCAAAGCCGTTACATTCCCACTTGGAAATGCTCAG...AATCAGAGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | TTTGAAAAGCCACTCTACAGTAATTATGGCAAGGCTCATTTAAATGCAGAGGTAACTGTTGTAGAGGACTaGGCATTTCCAAGTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FEKPLYSNYGKAHLNAEVTVVED*AFPSGN Trigger: ATTCCCACTTGGAAATGCTCAGTCCTCTACAACAGT...TACCTCTGCATTTAAATGAGCCTTGCCATAATTACTGTAGAGTGGCTTTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR TCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAACCTTTCTCCTTGAACTaGGTCTGCAAAGGCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLEPFSLN*VCKGKC Trigger: ACACTTGCCTTTGCAGACTCAGTTCAAGGAGAAAGG...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCCATCACTTTTCTAATTTGTACACAAAGTCTGATCACTCACTCATTTCAGAAGGGTGGAGGGTTTaGATCAGCATTACACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSHHFSNLYTKSDHSLISEGWRV*ISITLE Trigger: CTCAAGTGTAATGCTGATGCAAACCCTCCACCCTTC...TGAAATGAGTGAGTGATCAGACTTTGTGTACAAATTAGAAAAGTGATGGCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTAAAGCAGCTCAGATACATTGAACCCAGGTTTTACATTTTCATTTGTCAGCTGAGCATTTCCAAGTaGGAATGTAACGGCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVKQLRYIEPRFYIFICQLSISK*ECNGFA Trigger: TGCAAAGCCGTTACATTCCCACTTGGAAATGCTCAG...CTGACAAATGAAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGCTTTACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTACCAAAGCCACATTCACAAAACAACTGAACAATTTTCTTCCAGAGATCATACCACTCCCTCCTaGAAATTACGGAGCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: FVYQSHIHKTTEQFSSRDHTTPS*KLRSHL Trigger: TAGATGGCTCCGTAATTTCCAGGAGGGAGTGGTATG...ATCTCTGGAAGAAAATTGTTCAGTTGTTTTGTGAATGTGGCTTTGGTACACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CCA 90 bp | ACACAACTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCACATAATGTTCTCGTaGGTTGATGTAGAGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVVKEPLMMLSNLLLAHIMFS*VDVESL Trigger: GAGAGACTCTACATCAACCCACGAGAACATTATGTG...AGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAGTTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCTGATTCACATAATGTTCTCGTaGGTTGATGTAGAGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVVKEPLMMLSNLLLALIHIMFS*VDVESL Trigger: GAGAGACTCTACATCAACCCACGAGAACATTATGTG...AATCAGAGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| 3UTR CAA 72 bp | GGCTCACTCCTACTTAAAGGCTGTCTAGATTACCCATaGTCCATTACTGAAATACAAGCTGTGCAAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLLKGCLDYP*SITEIQAVQNT Trigger: AGTATTTTGCACAGCTTGTATTTCAGTAATGGACAATGGGTAATCTAGACAGCCTTTAAGTAGGAGTGAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR TCA 90 bp | GCCATCACTTTTCTAATTTGTACACAAAGTCTGATCACTCACTCATTTCAGAGGATGTATCTTCTCCCATaGGATCTGGGTTATAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AITFLICTQSLITHSFQRMYLLP*DLGYSF Trigger: GAAACTATAACCCAGATCTCATGGGAGAAGATACAT...CCTCTGAAATGAGTGAGTGATCAGACTTTGTGTACAAATTAGAAAAGTGATGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCTGATTCATCTTCTTGCATTGTaGTCTCATCCTCATAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVVKEPLMMLSNLLLALIHLLAL*SHPHSQ Trigger: TTGACTATGAGGATGAGAGCACAATGCAAGAAGATG...AATCAGAGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | ACACAACTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCATCTTCTTGCATTGTaGTCTCATCCTCATAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVVKEPLMMLSNLLLAHLLAL*SHPHSQ Trigger: TTGACTATGAGGATGAGAGCACAATGCAAGAAGATG...AGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAGTTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAATATAAAGGGGGCACATaGGCTGAGTTCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLEYKGGT*AEFHLL Trigger: AAGAAGATGGAACTCAGCGCATGTGCCCCCTTTATA...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTACCAAAGCCACATTCACAAAACAACTGAACAATTTTCTTCCAGAGATCTCGAGCAAATCTTGTaGGAAACAGCTTGTATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVYQSHIHKTTEQFSSRDLEQIL*ETACIG Trigger: GCCAATACAAGCTGTTTCCCACAAGATTTGCTCGAG...ATCTCTGGAAGAAAATTGTTCAGTTGTTTTGTGAATGTGGCTTTGGTACACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAATTCATATACAGGGGGTaGCTTATGTGTAGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLEFIYRG*LMCRWK Trigger: CTTCCACCTACACATAAGCCACCCCCTGTATATGAA...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023335.13 ENSMUST00000121245.8 |
||
| CDS-3UTR TCA 90 bp | TTTGAAAAGCCACTCTACAGTAATTATGGCAAGGCTCATTTAAATGCAGAGGTAATGTATCTTCTCCCATaGGATCTGGGTTATAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FEKPLYSNYGKAHLNAEVMYLLP*DLGYSF Trigger: GAAACTATAACCCAGATCTCATGGGAGAAGATACAT...TACCTCTGCATTTAAATGAGCCTTGCCATAATTACTGTAGAGTGGCTTTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR TCA 90 bp | TTTGAAAAGCCACTCTACAGTAATTATGGCAAGGCTCATTTAAATGCAGAGGTAACTGTATGTCTAGTATaGAAGAGTAGCGAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FEKPLYSNYGKAHLNAEVTVCLV*KSSECP Trigger: AGGACATTCGCTACTCTTTCATACTAGACATACAGT...TACCTCTGCATTTAAATGAGCCTTGCCATAATTACTGTAGAGTGGCTTTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR TCA 90 bp | ACTGTAAAGCAGCTCAGATACATTGAACCCAGGTTTTACATTTTCATTTGTCAGAAACGCCAGAATAATTaGCAGTCAATGGATGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TVKQLRYIEPRFYIFICQKRQNN*QSMDGQ Trigger: TTGTCCATCCATTGACTGTCAATTATTCTGGCGTTT...CTGACAAATGAAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGCTTTACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR TCA 90 bp | TTTGTGTACCAAAGCCACATTCACAAAACAACTGAACAATTTTCTTCCAGAGATTCTACATTATTCCACTaGGTTTTCTCAGGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVYQSHIHKTTEQFSSRDSTLFH*VFSGSS Trigger: AGAGGAGCCTGAGAAAACTCAGTGGAATAATGTAGA...ATCTCTGGAAGAAAATTGTTCAGTTGTTTTGTGAATGTGGCTTTGGTACACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR TCA 90 bp | GAAATGAAGAAAACAGGAAGGGATTGCCAACATTCATCAGCAAGTGTTATCAATTGTAGCGTTCATCACTaGCAAACTTCATTCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EMKKTGRDCQHSSASVINCSVHH*QTSFPF Trigger: AAATGGGAATGAAGTTTGTCAGTGATGAACGCTACA...ATTGATAACACTTGCTGATGAATGTTGGCAATCCCTTCCTGTTTTCTTCATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CCA 90 bp | ACTGTAAAGCAGCTCAGATACATTGAACCCAGGTTTTACATTTTCATTTGTCAGGTGGAATGTAGTTTTTaGCAAAGTAGTCTCCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVKQLRYIEPRFYIFICQVECSF*QSSLHE Trigger: TTCGTGGAGACTACTTTGCCAAAAACTACATTCCAC...CTGACAAATGAAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGCTTTACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAATGGCTTATGTGTAGGTaGAAGGTCGATTACTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLEWLMCR*KVDYFV Trigger: GACAAAGTAATCGACCTTCCACCTACACATAAGCCA...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023335.13 ENSMUST00000121245.8 |
||
| CDS-3UTR CCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAACACATAATGTTCTCGTaGGTTGATGTAGAGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLEHIMFS*VDVESL Trigger: GAGAGACTCTACATCAACCCACGAGAACATTATGTG...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR TCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAAACTGTATGTCTAGTATaGAAGAGTAGCGAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLETVCLV*KSSECP Trigger: AGGACATTCGCTACTCTTTCATACTAGACATACAGT...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR GCA 90 bp | GGAATACTTGAACATGTTAAGAATCATGTTGTTACAAAGGATCATGACAAGGCTCTGAGGATGATGAACTaGAACAGTCTGTGTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GILEHVKNHVVTKDHDKALRMMN*NSLCTF Trigger: AAAAGTACACAGACTGTTGCAGTTCATCATCCTCAG...AGCCTTGTCATGATCCTTTGTAACAACATGATTCTTAACATGTTCAAGTATTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR GCA 90 bp | AGCCATCACTTTTCTAATTTGTACACAAAGTCTGATCACTCACTCATTTCAGAGGAGAAGCCTATGTTATaGAGAGTAATTGTTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SHHFSNLYTKSDHSLISEEKPML*RVIVAS Trigger: TGATGCAACAATTACTCTGCATAACATAGGCTTCTC...CTCTGAAATGAGTGAGTGATCAGACTTTGTGTACAAATTAGAAAAGTGATGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR GCA 90 bp | TTTGTGTACCAAAGCCACATTCACAAAACAACTGAACAATTTTCTTCCAGAGATATACCCCAGCTAAAATaGTCACAAGCACTAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVYQSHIHKTTEQFSSRDIPQLK*SQALRR Trigger: TCTTCTTAGTGCTTGTGAGCATTTTAGCTGGGGTAT...ATCTCTGGAAGAAAATTGTTCAGTTGTTTTGTGAATGTGGCTTTGGTACACAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR GCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAACATCTTCTTGCATTGTaGTCTCATCCTCATAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLEHLLAL*SHPHSQ Trigger: TTGACTATGAGGATGAGAGCACAATGCAAGAAGATG...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR GCA 90 bp | ATTGCCAACATTCATCAGCAAGTGTTATCAATGACTGGTTCTGTAATTCAGATTGAGAAGCCTATGTTATaGAGAGTAATTGTTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IANIHQQVLSMTGSVIQIEKPML*RVIVAS Trigger: TGATGCAACAATTACTCTGCATAACATAGGCTTCTC...AATCTGAATTACAGAACCAGTCATTGATAACACTTGCTGATGAATGTTGGCAAT 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR GCA 90 bp | ATTGCCAACATTCATCAGCAAGTGTTATCAATGACTGGTTCTGTAATTCAGATTTTGGCTGACAATCGTTaGTGTTTCATTAGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IANIHQQVLSMTGSVIQILADNR*CFIRKR Trigger: TCTTTTCCTAATGAAACAGCAACGATTGTCAGCCAA...AATCTGAATTACAGAACCAGTCATTGATAACACTTGCTGATGAATGTTGGCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR GCA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAATTGGCTGACAATCGTTaGTGTTTCATTAGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NHLDASVSLRSKNKHLLELADNR*CFIRKR Trigger: TCTTTTCCTAATGAAACAGCAACGATTGTCAGCCAA...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| 3UTR CAA 72 bp | GATTCTCTAATTCACAGTAGCCATCACTTTTCTAATTaGTACACAAAGTCTGATCACTCACTCATTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSLIHSSHHFSN*YTKSDHSLISE Trigger: CTCTGAAATGAGTGAGTGATCAGACTTTGTGTACAAATTAGAAAAGTGATGGCTACTGTGAATTAGAGAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS GCA 90 bp | GCAGCAGTCCGGCCGCGGGAGGAAACGCCGAGGAAAGTTGTGCTTTaGCGCCTCCAGGACACAACGGGGCCGGGCCCGGGGTCCGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAVRPREETPRKVVL*RLQDTTGPGPGSAP Trigger: TGGCGCGGACCCCGGGCCCGGCCCCGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTTCCTCCCGCGGCCGGACTGCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS GCA 90 bp | CGGCAGCAGCAGTCCGGCCGCGGGAGGAAACGCCGAGGAAAGTTGTaGTTTGCCGCCTCCAGGACACAACGGGGCCGGGCCCGGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RQQQSGRGRKRRGKL*FAASRTQRGRARGP Trigger: CGGACCCCGGGCCCGGCCCCGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTTCCTCCCGCGGCCGGACTGCTGCTGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
||
| CDS GCA 90 bp | GCAGCAGTCCGGCCGCGGGAGGAAACGCCGAGGAAAGTTGTGCTTTaGCGCCTCCAGGACACAACGGGGCCGGGCCCGGGGTCCGCGCCN | + |
|
Preference number: 5 (lower is better) Translates to: AAVRPREETPRKVVL*RLQDTTGPGPGSAP Trigger: NGGCGCGGACCCCGGGCCCGGCCCCGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTTCCTCCCGCGGCCGGACTGCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149901.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCCTGCTCCAGCCTCTCTCTCAGGTGCTAGGTTTGCAGATGTGTGCCACGAGGAAAGTTGTGCTTaGCCGCCTCCAGGACACAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGPAPASLSGARFADVCHEESCA*PPPGHN Trigger: GTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTC...GTGGCACACATCTGCAAACCTAGCACCTGAGAGAGAGGCTGGAGCAGGACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS TCA 90 bp | GAGGGCCAGGACAGCTCCAATCACGGCTCCAGCCACTGCTATGGATaGGGTCTGCGTAAGCGGGATGTCTGTGTGCCTCAGACCAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGQDSSNHGSSHCYG*GLRKRDVCVPQTNK Trigger: TTTATTGGTCTGAGGCACACAGACATCCCGCTTACGCAGACCTCATCCATAGCAGTGGCTGGAGCCGTGATTGGAGCTGTCCTGGCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121245.8 |
||
| CDS CCA 90 bp | CACATAATGTTCTCGTGGGTTGATGTAGAGTCTCTCGGGGTTGCGTaGGTGATGTTGGCGAGGGCTTCGGTCTTGGTGGCACATCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HIMFSWVDVESLGVA*VMLARASVLVAHLA Trigger: AGCCAGATGTGCCACCAAGACCGAAGCCCTCGCCAACATCACCCACGCAACCCCGAGAGACTCTACATCAACCCACGAGAACATTATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS CCA 90 bp | CACCAAGATCACCTTCCCAGTCAATCTGTGCGACTGGCTTTCCAGTaGCTGCTACACAAACGGCTGCTACTGTCTCATTCCCTCCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: HQDHLPSQSVRLAFQ*LLHKRLLLSHSLHQ Trigger: TTGATGGAGGGAATGAGACAGTAGCAGCCGTTTGTGTAGCAGCCACTGGAAAGCCAGTCGCACAGATTGACTGGGAAGGTGATCTTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS-3UTR CAA 90 bp | GCAATGGGGTCTCCAGTAGCCCAGGCAGGTCTCAAACTCAGTGTCGCCAAGGCTACAGTCTGTGTACTTTaGCCATGTATCTTCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AMGSPVAQAGLKLSVAKATVCVL*PCIFSH Trigger: ATGGGAGAAGATACATGGCAAAAGTACACAGACTGT...AGCCTTGGCGACACTGAGTTTGAGACCTGCCTGGGCTACTGGAGACCCCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCCTGCTCCAGCCTCTCTCTCAGGTGCTAGGTTTGCAGATGTGTGCCACTCCCTGATAATCTCCTaGAACAGAGAATCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: PGPAPASLSGARFADVCHSLIIS*NRESIL Trigger: CAGTATGGATTCTCTGTTCAAGGAGATTATCAGGGA...GTGGCACACATCTGCAAACCTAGCACCTGAGAGAGAGGCTGGAGCAGGACCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS TCA 90 bp | GAGCCTTACTTACAGAGGGCTGAAGACCACCAGCTCCTTTCTCCTTaGACTGAGTCTGCAAAGGCAAGTGTTCAGTCTGGCCAAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EPYLQRAEDHQLLSP*TESAKASVQSGQEG Trigger: ACCTTCTTGGCCAGACTGAACACTTGCCTTTGCAGACTCAGTTCAAGGAGAAAGGAGCTGGTGGTCTTCAGCCCTCTGTAAGTAAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| CDS-3UTR CAA 90 bp | AGCACAGCATCGCAGTGTAGCTTTGTAGCTGTCAACCCTGGCAGAGAGGCTACTCTGAGTTCCATCTTCTaGCATTGTGCTCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: STASQCSFVAVNPGREATLSSIF*HCALIL Trigger: GAGGATGAGAGCACAATGCAAGAAGATGGAACTCAG...AGTAGCCTCTCTGCCAGGGTTGACAGCTACAAAGCTACACTGCGATGCTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CAA 90 bp | AAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGAGCTCACACACACAACTGGAGGAAAGTTGTGCTTaGCCGCCTCCAGGACACAAC | + |
|
Preference number: 5 (lower is better) Translates to: KLQSYREVKLQVSSHTQLEESCA*PPPGHN Trigger: GTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTC...CAGTTGTGTGTGTGAGCTCACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CAA 90 bp | CCTGCTCCAGCCTCTCTCTCAGGTGCTAGGTTTGCAGATGTGTGCCACAACAGCGCATCAGCATTACACTaGAGGTTAACACCTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PAPASLSGARFADVCHNSASALH*RLTPFL Trigger: AAGAAAAGGTGTTAACCTCAAGTGTAATGCTGATGC...GCTGTTGTGGCACACATCTGCAAACCTAGCACCTGAGAGAGAGGCTGGAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS GCA 90 bp | TGTACTAGATTCCATTTCACCAAGATCACCTTCCCAGTCAATCTGTaGGACTGGCTTTCCAGTGGCTGCTACACAAACGGCTGCTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: CTRFHFTKITFPVNL*DWLSSGCYTNGCYC Trigger: ACAGTAGCAGCCGTTTGTGTAGCAGCCACTGGAAAGCCAGTCGCACAGATTGACTGGGAAGGTGATCTTGGTGAAATGGAATCTAGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS CCA 90 bp | AGATTCCATTTCACCAAGATCACCTTCCCAGTCAATCTGTGCGACTaGCTTTCCAGTGGCTGCTACACAAACGGCTGCTACTGTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: RFHFTKITFPVNLCD*LSSGCYTNGCYCLI Trigger: AATGAGACAGTAGCAGCCGTTTGTGTAGCAGCCACTGGAAAGCCAGTCGCACAGATTGACTGGGAAGGTGATCTTGGTGAAATGGAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS CCA 90 bp | ATCAGGCCATTGTCCATCCAACCTGCTCCACACGGACTTGAAGGGTaGAGGGTTTGCATCAGCATTACACTTGAGGTTAACACCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IRPLSIQPAPHGLEG*RVCISITLEVNTFS Trigger: AGAAAAGGTGTTAACCTCAAGTGTAATGCTGATGCAAACCCTCCACCCTTCAAGTCCGTGTGGAGCAGGTTGGATGGACAATGGCCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGCCATCTTATTCCCCACCCCCATCAGTGCAGCCTTGTGAGACAGAGAACCACAGTCTGTGTACTTTaGCCATGTATCTTCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSHLIPHPHQCSLVRQRTTVCVL*PCIFSH Trigger: ATGGGAGAAGATACATGGCAAAAGTACACAGACTGT...GGTTCTCTGTCTCACAAGGCTGCACTGATGGGGGTGGGGAATAAGATGGCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGAAACGAGCTAATTGGGTCAGTGGAACACAAGTCTGCAGCAACAGGGGGGAATGTAACGGCTTaGCATATATATTTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: EVGNELIGSVEHKSAATGGNVTA*HIYFPE Trigger: TTCTGGAAAATATATATGCAAAGCCGTTACATTCCC...CCCTGTTGCTGCAGACTTGTGTTCCACTGACCCAATTAGCTCGTTTCCCACCTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CAA 90 bp | GCTGACTTTAAACTCCTGGTCCTGCTCCAGCCTCTCTCTCAGGTGCTAGGTTTGGGGAATGTAACGGCTTaGCATATATATTTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ADFKLLVLLQPLSQVLGLGNVTA*HIYFPE Trigger: TTCTGGAAAATATATATGCAAAGCCGTTACATTCCC...CAAACCTAGCACCTGAGAGAGAGGCTGGAGCAGGACCAGGAGTTTAAAGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCTGGGACAGTGCTAAGGACAGGACAAAAGGCTTCCAAATCCTTTTCTCTGTTCCTCGAGCAAATCTaGTGGGAAACAGCTTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: PPGTVLRTGQKASKSFSLFLEQI*WETACI Trigger: AATACAAGCTGTTTCCCACAAGATTTGCTCGAGGAA...CAGAGAAAAGGATTTGGAAGCCTTTTGTCCTGTCCTTAGCACTGTCCCAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CAA 90 bp | GGCCAAGTGTTAGTAGCTAAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGCTGAGTTCCATCTTCTaGCATTGTGCTCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GQVLVAKLQSYREVKLQVLSSIF*HCALIL Trigger: GAGGATGAGAGCACAATGCAAGAAGATGGAACTCAG...CACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTTAGCTACTAACACTTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023335.13 ENSMUST00000121803.8 |
||
| CDS CCA 90 bp | TTCTTGCATTGTGCTCTCATCCTCATAGTCAAATCTCCTGCTAATTaGTCCATTAGAGGGCTGAAGACCACCAGCTCCTTTCTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLHCALILIVKSPAN*SIRGLKTTSSFLLE Trigger: TTCAAGGAGAAAGGAGCTGGTGGTCTTCAGCCCTCTAATGGACCAATTAGCAGGAGATTTGACTATGAGGATGAGAGCACAATGCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGCAGCTCAGATACATTGAACCCAGGTTTTACATTTTCATTTGTCAGAAACGCCGAGGAAAGTaGTGCTTTGCCGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVKQLRYIEPRFYIFICQKRRGK*CFAASR Trigger: CCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTT...CTGACAAATGAAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGCTTTACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS CCA 90 bp | CAATCTGTGATTCTTTCTGCATGTCTGATGGTGGAATGTAGTTTTTaGCAAAGTAGTCTCCACGAAACGTCCGTCGTCTCCTATAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSVILSACLMVECSF*QSSLHETSVVSYSR Trigger: TCTGCTATAGGAGACGACGGACGTTTCGTGGAGACTACTTTGCCAAAAACTACATTCCACCATCAGACATGCAGAAAGAATCACAGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CAA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAAAAACGCCGAGGAAAGTaGTGCTTTGCCGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NHLDASVSLRSKNKHLLEKRRGK*CFAASR Trigger: CCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTT...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CAA 90 bp | AAAATACTTCTGCCATTCATTACCCAGGATTCAACACCCAGGTACCGTGAAGGGTCCCTGATAATCTCCTaGAACAGAGAATCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: KILLPFITQDSTPRYREGSLIIS*NRESIL Trigger: CAGTATGGATTCTCTGTTCAAGGAGATTATCAGGGA...CCCTTCACGGTACCTGGGTGTTGAATCCTGGGTAATGAATGGCAGAAGTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS-3UTR CAA 90 bp | ATTCACTTCAAATTTTGCAATGGGGTCTCCAGTAGCCCAGGCAGGTCTCAAACTTTCCTCGAGCAAATCTaGTGGGAAACAGCTTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: IHFKFCNGVSSSPGRSQTFLEQI*WETACI Trigger: AATACAAGCTGTTTCCCACAAGATTTGCTCGAGGAA...AGTTTGAGACCTGCCTGGGCTACTGGAGACCCCATTGCAAAATTTGAAGTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096052.9 |
||
| CDS-3UTR CAA 90 bp | AAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGAGCTCACACACACAACTGTTCCATCTTCTTGCATaGTGCTCTCATCCTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLQSYREVKLQVSSHTQLFHLLA*CSHPHS Trigger: ACTATGAGGATGAGAGCACAATGCAAGAAGATGGAA...CAGTTGTGTGTGTGAGCTCACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023335.13 ENSMUST00000121803.8 |
||
| CDS-3UTR CAA 90 bp | ATTGCCAACATTCATCAGCAAGTGTTATCAATGACTGGTTCTGTAATTCAGATTGAGGAAAGTTGTGCTTaGCCGCCTCCAGGACACAAC | + |
|
Preference number: 5 (lower is better) Translates to: IANIHQQVLSMTGSVIQIEESCA*PPPGHN Trigger: GTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTC...AATCTGAATTACAGAACCAGTCATTGATAACACTTGCTGATGAATGTTGGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CAA 90 bp | GGCCAAGTGTTAGTAGCTAAACTTCAGAGTTACAGGGAAGTGAAGCTACAGGTGGCATCAGCATTACACTaGAGGTTAACACCTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQVLVAKLQSYREVKLQVASALH*RLTPFL Trigger: AAGAAAAGGTGTTAACCTCAAGTGTAATGCTGATGC...CACCTGTAGCTTCACTTCCCTGTAACTCTGAAGTTTAGCTACTAACACTTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023335.13 |
||
| CDS TCA 90 bp | AGGCTCACTGTGGGTTCAACTAACACAGTCACTGTTGTAGAGGACTaGGCATTTCCAAGTGGGAATGTAACGGCTTTGCATATATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLTVGSTNTVTVVED*AFPSGNVTALHIYF Trigger: AAAATATATATGCAAAGCCGTTACATTCCCACTTGGAAATGCTCAGTCCTCTACAACAGTGACTGTGTTAGTTGAACCCACAGTGAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS CCA 90 bp | GTAATTCGCCTTCCTCGAGCAAATCTTGTGGGAAACAGCTTGTATTaGCTGACAATCGTTGCTGTTTCATTAGGAAAAGAAGTTGTACTA | + |
|
Preference number: 5 (lower is better) Translates to: VIRLPRANLVGNSLY*LTIVAVSLGKEVVL Trigger: TAGTACAACTTCTTTTCCTAATGAAACAGCAACGATTGTCAGCCAATACAAGCTGTTTCCCACAAGATTTGCTCGAGGAAGGCGAATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS TCA 90 bp | ACTGAAACTTCAGGAGCATCTAACACAGTCACTGTTGTAGAGGACTaGGCATTTCCAAGTGGGAATGTAACGGCTTTGCATATATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: TETSGASNTVTVVED*AFPSGNVTALHIYF Trigger: AAAATATATATGCAAAGCCGTTACATTCCCACTTGGAAATGCTCAGTCCTCTACAACAGTGACTGTGTTAGATGCTCCTGAAGTTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149901.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGGTTAAGGAACCCTTAATGATGTTAAGCAATCTACTCTTAGCTCTGATTTTCCATCTTCTTGCATaGTGCTCTCATCCTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVVKEPLMMLSNLLLALIFHLLA*CSHPHS Trigger: ACTATGAGGATGAGAGCACAATGCAAGAAGATGGAA...AATCAGAGCTAAGAGTAGATTGCTTAACATCATTAAGGGTTCCTTAACCACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121803.8 |
||
| CDS-3UTR CAA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAACTGAGTTCCATCTTCTaGCATTGTGCTCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NHLDASVSLRSKNKHLLELSSIF*HCALIL Trigger: GAGGATGAGAGCACAATGCAAGAAGATGGAACTCAG...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAAAGCCACTCTACAGTAATTATGGCAAGGCTCATTTAAATGCAGAGGTAACAGTCTGTGTACTTTaGCCATGTATCTTCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FEKPLYSNYGKAHLNAEVTVCVL*PCIFSH Trigger: ATGGGAGAAGATACATGGCAAAAGTACACAGACTGT...TACCTCTGCATTTAAATGAGCCTTGCCATAATTACTGTAGAGTGGCTTTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CAA 90 bp | TTTGAAAAGCCACTCTACAGTAATTATGGCAAGGCTCATTTAAATGCAGAGGTATCCCTGATAATCTCCTaGAACAGAGAATCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: FEKPLYSNYGKAHLNAEVSLIIS*NRESIL Trigger: CAGTATGGATTCTCTGTTCAAGGAGATTATCAGGGA...TACCTCTGCATTTAAATGAGCCTTGCCATAATTACTGTAGAGTGGCTTTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGCAGCTCAGATACATTGAACCCAGGTTTTACATTTTCATTTGTCAGTTCCTCGAGCAAATCTaGTGGGAAACAGCTTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TVKQLRYIEPRFYIFICQFLEQI*WETACI Trigger: AATACAAGCTGTTTCCCACAAGATTTGCTCGAGGAA...CTGACAAATGAAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGCTTTACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS TCA 90 bp | GACCAAGGGAATTTGATACTTTACAGACATAAACGCCAGAATAATTaGCAGTCAATGGATGGACAAAATGAAGAGTATTATCTGACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DQGNLILYRHKRQNN*QSMDGQNEEYYLTP Trigger: TGGCGTCAGATAATACTCTTCATTTTGTCCATCCATTGACTGTCAATTATTCTGGCGTTTATGTCTGTAAAGTATCAAATTCCCTTGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGCAGCTCAGATACATTGAACCCAGGTTTTACATTTTCATTTGTCAGGCATCAGCATTACACTaGAGGTTAACACCTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TVKQLRYIEPRFYIFICQASALH*RLTPFL Trigger: AAGAAAAGGTGTTAACCTCAAGTGTAATGCTGATGC...CTGACAAATGAAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGCTTTACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CAA 90 bp | AATCACTTAGATGCCTCAGTGTCTCTCAGGTCTAAGAATAAACATTTGTTAGAATTCCATCTTCTTGCATaGTGCTCTCATCCTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: NHLDASVSLRSKNKHLLEFHLLA*CSHPHS Trigger: ACTATGAGGATGAGAGCACAATGCAAGAAGATGGAA...TTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGCATCTAAGTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS TCA 90 bp | CATGAGAAACCAAACCATCTTCACTTTCATTGTAGCGTTCATCACTaGCAAACTTCATTCCCATTTTTAGATCTTCATAGTAATCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: HEKPNHLHFHCSVHH*QTSFPFLDLHSNPS Trigger: CGATGGATTACTATGAAGATCTAAAAATGGGAATGAAGTTTGTCAGTGATGAACGCTACAATGAAAGTGAAGATGGTTTGGTTTCTCATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGCAGCTCAGATACATTGAACCCAGGTTTTACATTTTCATTTGTCAGGGGAATGTAACGGCTTaGCATATATATTTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVKQLRYIEPRFYIFICQGNVTA*HIYFPE Trigger: TTCTGGAAAATATATATGCAAAGCCGTTACATTCCC...CTGACAAATGAAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGCTTTACAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGCAGCTCAGATACATTGAACCCAGGTTTTACATTTTCATTTGTCAGTCTTTGCGGATCAGGTaGTTTACTGGATTTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVKQLRYIEPRFYIFICQSLRIR*FTGFLF Trigger: AAACAAAAATCCAGTAAACAACCTGATCCGCAAAGA...CTGACAAATGAAAATGTAAAACCTGGGTTCAATGTATCTGAGCTGCTTTACAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS CAA 90 bp | AGCAGCAGTCCGGCCGCGGGAGGAAACGCCGAGGAAAGTTGTGCTTaGCCGCCTCCAGGACACAACGGGGCCGGGCCCGGGGTCCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSPAAGGNAEESCA*PPPGHNGAGPGVRA Trigger: GGCGCGGACCCCGGGCCCGGCCCCGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTTCCTCCCGCGGCCGGACTGCTGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
||
| CDS CAA 90 bp | GGCCGGCAGCAGCAGTCCGGCCGCGGGAGGAAACGCCGAGGAAAGTaGTGCTTTGCCGCCTCCAGGACACAACGGGGCCGGGCCCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRQQQSGRGRKRRGK*CFAASRTQRGRARG Trigger: ACCCCGGGCCCGGCCCCGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTTCCTCCCGCGGCCGGACTGCTGCTGCCGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
||
| CDS GCA 72 bp | CGGCCGCGGGAGGAAACGCCGAGGAAAGTTGTGCTTTaGCGCCTCCAGGACACAACGGGGCCGGGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPREETPRKVVL*RLQDTTGPGPG Trigger: CCCCGGGCCCGGCCCCGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTTCCTCCCGCGGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
||
| CDS GCA 72 bp | CAGTCCGGCCGCGGGAGGAAACGCCGAGGAAAGTTGTaGTTTGCCGCCTCCAGGACACAACGGGGCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSGRGRKRRGKL*FAASRTQRGRA Trigger: GGCCCGGCCCCGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTTCCTCCCGCGGCCGGACTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
||
| CDS CAA 72 bp | CAGCAGTCCGGCCGCGGGAGGAAACGCCGAGGAAAGTaGTGCTTTGCCGCCTCCAGGACACAACGGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QQSGRGRKRRGK*CFAASRTQRGR Trigger: CCGGCCCCGTTGTGTCCTGGAGGCGGCAAAGCACAACTTTCCTCGGCGTTTCCTCCCGCGGCCGGACTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
||
| CDS TCA 72 bp | GACAGCTCCAATCACGGCTCCAGCCACTGCTATGGATaGGGTCTGCGTAAGCGGGATGTCTGTGTGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DSSNHGSSHCYG*GLRKRDVCVPQ Trigger: CTGAGGCACACAGACATCCCGCTTACGCAGACCTCATCCATAGCAGTGGCTGGAGCCGTGATTGGAGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121245.8 |
||
| CDS CCA 72 bp | TTCTCGTGGGTTGATGTAGAGTCTCTCGGGGTTGCGTaGGTGATGTTGGCGAGGGCTTCGGTCTTGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FSWVDVESLGVA*VMLARASVLVA Trigger: TGCCACCAAGACCGAAGCCCTCGCCAACATCACCCACGCAACCCCGAGAGACTCTACATCAACCCACGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS CAA 90 bp | TTCTCGTGGGTTGATGTAGAGTCTCTCGGGGTTGCGTGGGTGATGTaGGCGAGGGCTTCGGTCTTGGTGGCACATCTGGCTATAAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSWVDVESLGVAWVM*ARASVLVAHLAIKG Trigger: CCCCTTTATAGCCAGATGTGCCACCAAGACCGAAGCCCTCGCCAACATCACCCACGCAACCCCGAGAGACTCTACATCAACCCACGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
||
| CDS GCA 72 bp | TTCCCAGTCAATCTGTGCGACTGGCTTTCCAGTGGCTaGTACACAAACGGCTGCTACTGTCTCATTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FPVNLCDWLSSG*YTNGCYCLIPS Trigger: GGAGGGAATGAGACAGTAGCAGCCGTTTGTGTAGCAGCCACTGGAAAGCCAGTCGCACAGATTGACTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS CCA 72 bp | CACCTTCCCAGTCAATCTGTGCGACTGGCTTTCCAGTaGCTGCTACACAAACGGCTGCTACTGTCTCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: HLPSQSVRLAFQ*LLHKRLLLSHS Trigger: GGAATGAGACAGTAGCAGCCGTTTGTGTAGCAGCCACTGGAAAGCCAGTCGCACAGATTGACTGGGAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS CCA 72 bp | TTCACCAAGATCACCTTCCCAGTCAATCTGTGCGACTaGCTTTCCAGTGGCTGCTACACAAACGGCTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FTKITFPVNLCD*LSSGCYTNGCY Trigger: GTAGCAGCCGTTTGTGTAGCAGCCACTGGAAAGCCAGTCGCACAGATTGACTGGGAAGGTGATCTTGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
||
| CDS CCA 72 bp | CGGTTATGGCCATCTGACAGAACGGTAAAGGATACCTaGGTGAGTACAGCACGAGCCTTACTTACAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLWPSDRTVKDT*VSTARALLTEG Trigger: GCCCTCTGTAAGTAAGGCTCGTGCTGTACTCACCCAGGTATCCTTTACCGTTCTGTCAGATGGCCATAACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
||
| CDS TCA 72 bp | TTTATGCTCTGTTGCTATATCCTGGACGTCAGCAGGTaGGGAATGCCACTGAACTGTCGGCTGAAGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FMLCCYILDVSR*GMPLNCRLKGG Trigger: ACCACCCTTCAGCCGACAGTTCAGTGGCATTCCTCACCTGCTGACGTCCAGGATATAGCAACAGAGCATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023334.15 |
||
| CDS TCA 72 bp | TTACAGAGGGCTGAAGACCACCAGCTCCTTTCTCCTTaGACTGAGTCTGCAAAGGCAAGTGTTCAGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQRAEDHQLLSP*TESAKASVQSG Trigger: GCCAGACTGAACACTTGCCTTTGCAGACTCAGTTCAAGGAGAAAGGAGCTGGTGGTCTTCAGCCCTCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124602.2 |
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| CDS GCA 72 bp | GGTCTTGGTGGCACATCTGGCTATAAAGGGGGCACATaGGCTGAGTTCCATCTTCTTGCATTGTGCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GLGGTSGYKGGT*AEFHLLALCSH Trigger: ATGAGAGCACAATGCAAGAAGATGGAACTCAGCGCATGTGCCCCCTTTATAGCCAGATGTGCCACCAAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000119941.2 ENSMUST00000121245.8 ENSMUST00000121803.8 |
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| CDS CCA 72 bp | TTGTCCATCCAACCTGCTCCACACGGACTTGAAGGGTaGAGGGTTTGCATCAGCATTACACTTGAGGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: LSIQPAPHGLEG*RVCISITLEVN Trigger: GTTAACCTCAAGTGTAATGCTGATGCAAACCCTCCACCCTTCAAGTCCGTGTGGAGCAGGTTGGATGGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
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| CDS CAA 90 bp | CTCCACACGGACTTGAAGGGTGGAGGGTTTGCATCAGCATTACACTaGAGGTTAACACCTTTTCTTCCCACGAACCAATTTCCATCATAT | + |
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Preference number: 6 (lower is better) Translates to: LHTDLKGGGFASALH*RLTPFLPTNQFPSY Trigger: ATATGATGGAAATTGGTTCGTGGGAAGAAAAGGTGTTAACCTCAAGTGTAATGCTGATGCAAACCCTCCACCCTTCAAGTCCGTGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
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| CDS GCA 72 bp | GCTATGGATGAGGTCTGCGTAAGCGGGATGTCTGTGTaGCTCAGACCAATAAAGTACTCTGCATTAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: AMDEVCVSGMSV*LRPIKYSALEF Trigger: AAATTCTAATGCAGAGTACTTTATTGGTCTGAGGCACACAGACATCCCGCTTACGCAGACCTCATCCATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121245.8 |
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| CDS CCA 72 bp | TCGTTCTTCATATACAGGGGGTGGCTTATGTGTAGGTaGAAGGTCGATTACTTTGTCAAGATAGGACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SFFIYRGWLMCR*KVDYFVKIGRS Trigger: AGACCGTCCTATCTTGACAAAGTAATCGACCTTCCACCTACACATAAGCCACCCCCTGTATATGAAGAACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000121245.8 ENSMUST00000124602.2 |
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| CDS CAA 72 bp | ATTCGCCTTCCTCGAGCAAATCTTGTGGGAAACAGCTaGTATTGGCTGACAATCGTTGCTGTTTCATTAGGA | + |
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Preference number: 6 (lower is better) Translates to: IRLPRANLVGNS*YWLTIVAVSLG Trigger: TCCTAATGAAACAGCAACGATTGTCAGCCAATACAAGCTGTTTCCCACAAGATTTGCTCGAGGAAGGCGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
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| CDS CAA 72 bp | GACTTGAAGGGTGGAGGGTTTGCATCAGCATTACACTaGAGGTTAACACCTTTTCTTCCCACGAACCAATTT | + |
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Preference number: 6 (lower is better) Translates to: DLKGGGFASALH*RLTPFLPTNQF Trigger: AAATTGGTTCGTGGGAAGAAAAGGTGTTAACCTCAAGTGTAATGCTGATGCAAACCCTCCACCCTTCAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
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| CDS GCA 72 bp | TCCTTGAACAGAGAATCCATACTGAGGATGATGAACTaGAACAGTCTGTGTACTTTTGCCATGTATCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLNRESILRMMN*NSLCTFAMYLL Trigger: GAGAAGATACATGGCAAAAGTACACAGACTGTTGCAGTTCATCATCCTCAGTATGGATTCTCTGTTCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
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| CDS CCA 72 bp | CACAGTCACTGTTGTAGAGGACTGAGCATTTCCAAGTaGGAATGTAACGGCTTTGCATATATATTTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HSHCCRGLSISK*ECNGFAYIFSR Trigger: TCTGGAAAATATATATGCAAAGCCGTTACATTCCCACTTGGAAATGCTCAGTCCTCTACAACAGTGACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
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| CDS CAA 90 bp | AGTAATTCGCCTTCCTCGAGCAAATCTTGTGGGAAACAGCTTGTATaGGCTGACAATCGTTGCTGTTTCATTAGGAAAAGAAGTTGTACT | + |
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Preference number: 6 (lower is better) Translates to: SNSPSSSKSCGKQLV*ADNRCCFIRKRSCT Trigger: AGTACAACTTCTTTTCCTAATGAAACAGCAACGATTGTCAGCCAATACAAGCTGTTTCCCACAAGATTTGCTCGAGGAAGGCGAATTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
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| CDS CAA 90 bp | ACACAAGTAATTCGCCTTCCTCGAGCAAATCTTGTGGGAAACAGCTaGTATTGGCTGACAATCGTTGCTGTTTCATTAGGAAAAGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: TQVIRLPRANLVGNS*YWLTIVAVSLGKEV Trigger: AACTTCTTTTCCTAATGAAACAGCAACGATTGTCAGCCAATACAAGCTGTTTCCCACAAGATTTGCTCGAGGAAGGCGAATTACTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
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| CDS TCA 72 bp | TTACTGAAACTTCAGGAGCATACTGTATGTCTAGTATaGAAGAGTAGCGAATGTCCTTTTCTAAGGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LLKLQEHTVCLV*KSSECPFLRLD Trigger: ATCCAGCCTTAGAAAAGGACATTCGCTACTCTTTCATACTAGACATACAGTATGCTCCTGAAGTTTCAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 |
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| CDS CAA 72 bp | ATAGTTTTTAAACAAGACTCTTCCCTGATAATCTCCTaGAACAGAGAATCCATACTGAGGATGATGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: IVFKQDSSLIIS*NRESILRMMNC Trigger: GCAGTTCATCATCCTCAGTATGGATTCTCTGTTCAAGGAGATTATCAGGGAAGAGTCTTGTTTAAAAACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023334.15 ENSMUST00000023335.13 ENSMUST00000096052.9 ENSMUST00000149901.2 |
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