Pregenerated sensors for NECTIN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062300Ensembl transcript IDs: ENSMUST00000075447.14, ENSMUST00000108450.5
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGAAAGCAAGCTCTGAGGAGTCCTGAGTGTGCACCATGGCGCTCCTaGGGTCCCCTACTCCATGAGGCCCTAAAGATAGGAGTCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: RKQALRSPECAPWRS*GPLLHEALKIGVCV Trigger: CACACAGACTCCTATCTTTAGGGCCTCATGGAGTAGGGGACCCCAGGAGCGCCATGGTGCACACTCAGGACTCCTCAGAGCTTGCTTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| 3UTR GCA 90 bp | ACCTGGGTGCTGAGGAGAGGGTGTGAGAAACCTGAGATTCCTGCCTaGAGGAGTAGGTGGAGATGGGGAGGTCCTACCTTACATTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: TWVLRRGCEKPEIPA*RSRWRWGGPTLHWG Trigger: TCCCCAATGTAAGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCTCACACCCTCTCCTCAGCACCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR TCA 90 bp | CGGTCCCTAGCCATCGTTGCTGGCTGGCATTGGTGTGGTTGGCAGTaGGGGTGGAACTTGGTGTTTCCATGTGTCCAGTGTCTATATCGT | + |
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Preference number: 1 (lower is better) Translates to: RSLAIVAGWHWCGWQ*GWNLVFPCVQCLYR Trigger: ACGATATAGACACTGGACACATGGAAACACCAAGTTCCACCCTCACTGCCAACCACACCAATGCCAGCCAGCAACGATGGCTAGGGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| 3UTR CCA 90 bp | GGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTaGACTCTATTGCCTGAGGACAAGTGCAAGGTCCGATTCCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: GLSNREPLIPFLHIC*TLLPEDKCKVRFLW Trigger: CCAAAGGAATCGGACCTTGCACTTGTCCTCAGGCAATAGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CCA 90 bp | GGGTGTGAGAAACCTGAGATTCCTGCCTGCAGGAGTAGGTGGAGATaGGGAGGTCCTACCTTACATTGGGGAATCCTCTCCTTTTCACCT | + |
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Preference number: 1 (lower is better) Translates to: GCEKPEIPACRSRWR*GGPTLHWGILSFSP Trigger: AGGTGAAAAGGAGAGGATTCCCCAATGTAAGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCTCACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR GCA 90 bp | AGGATAAGAGCAGAGTCTCCCAAACTTGGGGTGGCAAGGCACACTTaGATTAGGTTCTCCCCTCTAGCATTGGACCTGGAATTCATGCTC | + |
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Preference number: 1 (lower is better) Translates to: RIRAESPKLGVARHT*IRFSPLALDLEFML Trigger: GAGCATGAATTCCAGGTCCAATGCTAGAGGGGAGAACCTAATGCAAGTGTGCCTTGCCACCCCAAGTTTGGGAGACTCTGCTCTTATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGAGTGTTTCGGGGCCAGGGCTAGGCTGGGGCCGAAAGCAAGCTCTGAGGTGGCTGGCATTGGTGTaGTTGGCAGTGAGGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LLSVSGPGLGWGRKQALRWLALV*LAVRVE Trigger: TTCCACCCTCACTGCCAACCACACCAATGCCAGCCA...CCTCAGAGCTTGCTTTCGGCCCCAGCCTAGCCCTGGCCCCGAAACACTCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| 3UTR-3UTR GCA 90 bp | AGAAACCTGAGATTCCTGCCTGCAGGAGTAGGTGGAGATGGGGAGGTCCTACCTCAGGTGAGCTTCTGCTaGCTGGAGGGCTCAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: RNLRFLPAGVGGDGEVLPQVSFC*LEGSGL Trigger: CAGACCTGAGCCCTCCAGGCAGCAGAAGCTCACCTG...AGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CAA 90 bp | GTCCAACCGGTCCCTAGCCATCGTTGCTGGCTGGCATTGGTGTGGTaGGCAGTGAGGGTGGAACTTGGTGTTTCCATGTGTCCAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: VQPVPSHRCWLALVW*AVRVELGVSMCPVS Trigger: AGACACTGGACACATGGAAACACCAAGTTCCACCCTCACTGCCAACCACACCAATGCCAGCCAGCAACGATGGCTAGGGACCGGTTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| 3UTR-3UTR TCA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTGTCAAGGGTGAAAGGTaGGACGTCAGAGCCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSVKGER*DVRAPV Trigger: CACAGGGGCTCTGACGTCTCACCTTTCACCCTTGAC...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR TCA 90 bp | AGAAACCTGAGATTCCTGCCTGCAGGAGTAGGTGGAGATGGGGAGGTCCTACCTGCAACAGGGAGCCCCTaGTCCCGTTCTTGCATATCT | + |
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Preference number: 2 (lower is better) Translates to: RNLRFLPAGVGGDGEVLPATGSP*SRSCIS Trigger: AGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGC...AGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR GCA 90 bp | AGAAACCTGAGATTCCTGCCTGCAGGAGTAGGTGGAGATGGGGAGGTCCTACCTTTGTGCAGGTTTGCCTaGCTCAGACATCATAGATTG | + |
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Preference number: 2 (lower is better) Translates to: RNLRFLPAGVGGDGEVLPLCRFA*LRHHRL Trigger: CAATCTATGATGTCTGAGGCAGGCAAACCTGCACAA...AGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CAA 90 bp | CCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCATAGATaGGACGTCATGGTGGAGTCACTAAGAAGTCACAGGTGGATTGCA | + |
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Preference number: 2 (lower is better) Translates to: PGFQLCRFACLRHHR*DVMVESLRSHRWIA Trigger: TGCAATCCACCTGTGACTTCTTAGTGACTCCACCATGACGTCCAATCTATGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CAA 90 bp | CCTGCCAAGGGAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTaGCCTGCCTCAGACATCATAGATTGGACGTCATGGTGGAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: PAKGDKNLQVSSCAG*PASDIIDWTSWWSH Trigger: GTGACTCCACCATGACGTCCAATCTATGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTCCCTTGGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR CCA 90 bp | GGGTCACAGGTGGTGCAGAAGGATATGGTGAGCTCCCTGCCAAGGGAGATAAAAAGTGTCCTAGATTACTaGTGGAAAGCTCATGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GSQVVQKDMVSSLPREIKSVLDY*WKAHGS Trigger: TGACCCATGAGCTTTCCACCAGTAATCTAGGACACT...TTTTATCTCCCTTGGCAGGGAGCTCACCATATCCTTCTGCACCACCTGTGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR CCA 90 bp | GGAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCTGTCCCTGGTCTGCCTaGAAGTCAGAGTGTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: GDKNLQVSSCAGLPASDICPWSA*KSECPR Trigger: TCTAGGACACTCTGACTTCCAGGCAGACCAGGGACA...GATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR CCA 90 bp | GGAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCGGTGATAGTTGTCCCTaGTCTGCCTGGAAGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GDKNLQVSSCAGLPASDIGDSCP*SAWKSE Trigger: CTCTGACTTCCAGGCAGACCAGGGACAACTATCACC...GATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR CCA 90 bp | AGAAACCTGAGATTCCTGCCTGCAGGAGTAGGTGGAGATGGGGAGGTCCTACCTCTAAGAAGTCACAGGTaGATTGCAATGGGTGATAGT | + |
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Preference number: 2 (lower is better) Translates to: RNLRFLPAGVGGDGEVLPLRSHR*IAMGDS Trigger: ACTATCACCCATTGCAATCCACCTGTGACTTCTTAG...AGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR CCA 90 bp | CCAACCCAGATGCCCAGATTCTCCATCACACACACATACACACACCATCCCCTATTCTTGCATATCTGTTaGACTCTATTGCCTGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: PTQMPRFSITHTYTHHPLFLHIC*TLLPED Trigger: GTCCTCAGGCAATAGAGTCCAACAGATATGCAAGAA...TAGGGGATGGTGTGTGTATGTGTGTGTGATGGAGAATCTGGGCATCTGGGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CCA 72 bp | CGAAAGCAAGCTCTGAGGAGTCCTGAGTGTGCACCATaGCGCTCCTGGGGTCCCCTACTCCATGAGGCCCTA | + |
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Preference number: 3 (lower is better) Translates to: RKQALRSPECAP*RSWGPLLHEAL Trigger: TAGGGCCTCATGGAGTAGGGGACCCCAGGAGCGCCATGGTGCACACTCAGGACTCCTCAGAGCTTGCTTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| 3UTR CCA 72 bp | GCTCTGAGGAGTCCTGAGTGTGCACCATGGCGCTCCTaGGGTCCCCTACTCCATGAGGCCCTAAAGATAGGA | + |
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Preference number: 3 (lower is better) Translates to: ALRSPECAPWRS*GPLLHEALKIG Trigger: TCCTATCTTTAGGGCCTCATGGAGTAGGGGACCCCAGGAGCGCCATGGTGCACACTCAGGACTCCTCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| 3UTR CCA 72 bp | CCGGTCCCTAGCCATCGTTGCTGGCTGGCATTGGTGTaGTTGGCAGTGAGGGTGGAACTTGGTGTTTCCATG | + |
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Preference number: 3 (lower is better) Translates to: PVPSHRCWLALV*LAVRVELGVSM Trigger: CATGGAAACACCAAGTTCCACCCTCACTGCCAACCACACCAATGCCAGCCAGCAACGATGGCTAGGGACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| 3UTR TCA 72 bp | GCCATCGTTGCTGGCTGGCATTGGTGTGGTTGGCAGTaGGGGTGGAACTTGGTGTTTCCATGTGTCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: AIVAGWHWCGWQ*GWNLVFPCVQC Trigger: ACACTGGACACATGGAAACACCAAGTTCCACCCTCACTGCCAACCACACCAATGCCAGCCAGCAACGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| 3UTR TCA 72 bp | GATAGGAGTCTGTGTGGTTCCACTTGTCCTCTATCCTaGAAGCAGGGGCGGTGCCCTTCCAACTCCAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: DRSLCGSTCPLS*KQGRCPSNSSV Trigger: CACACTGGAGTTGGAAGGGCACCGCCCCTGCTTTCAGGATAGAGGACAAGTGGAACCACACAGACTCCTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| 3UTR-3UTR CAA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTTCTCCAGGTTTCCAGTaGTGCAGGTTTGCCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSSPGFQ*CRFACL Trigger: GAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGA...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CCA 72 bp | AACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTaGACTCTATTGCCTGAGGACAAGTGCAAGGTCCGA | + |
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Preference number: 3 (lower is better) Translates to: NREPLIPFLHIC*TLLPEDKCKVR Trigger: TCGGACCTTGCACTTGTCCTCAGGCAATAGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CCA 72 bp | TGTGAGAAACCTGAGATTCCTGCCTGCAGGAGTAGGTaGAGATGGGGAGGTCCTACCTTACATTGGGGAATC | + |
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Preference number: 3 (lower is better) Translates to: CEKPEIPACRSR*RWGGPTLHWGI Trigger: GATTCCCCAATGTAAGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR CAA 90 bp | CCAACCCAGATGCCCAGATTCTCCATCACACACACATACACACACCATCCCCTATTCTCCCCTCTAGCATaGGACCTGGAATTCATGCTC | + |
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Preference number: 3 (lower is better) Translates to: PTQMPRFSITHTYTHHPLFSPLA*DLEFML Trigger: GAGCATGAATTCCAGGTCCAATGCTAGAGGGGAGAA...TAGGGGATGGTGTGTGTATGTGTGTGTGATGGAGAATCTGGGCATCTGGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CCA 72 bp | ATTGGACCTGGAATTCATGCTCTGGAGACAGGAACCTaGGTGCTGAGGAGAGGGTGTGAGAAACCTGAGATT | + |
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Preference number: 3 (lower is better) Translates to: IGPGIHALETGT*VLRRGCEKPEI Trigger: AATCTCAGGTTTCTCACACCCTCTCCTCAGCACCCAGGTTCCTGTCTCCAGAGCATGAATTCCAGGTCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CCA 72 bp | TGGATTGCAATGGGTGATAGTTGTCCCTGGTCTGCCTaGAAGTCAGAGTGTCCTAGATTACTGGTGGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: WIAMGDSCPWSA*KSECPRLLVES Trigger: GCTTTCCACCAGTAATCTAGGACACTCTGACTTCCAGGCAGACCAGGGACAACTATCACCCATTGCAATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR CCA 72 bp | AGTCACAGGTGGATTGCAATGGGTGATAGTTGTCCCTaGTCTGCCTGGAAGTCAGAGTGTCCTAGATTACTG | + |
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Preference number: 3 (lower is better) Translates to: SHRWIAMGDSCP*SAWKSECPRLL Trigger: CAGTAATCTAGGACACTCTGACTTCCAGGCAGACCAGGGACAACTATCACCCATTGCAATCCACCTGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| 3UTR-3UTR CAA 90 bp | GAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCAGAAGTCACAGGTGGATaGCAATGGGTGATAGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: EIKISRFPVVQVCLPQTSEVTGG*QWVIVV Trigger: GACAACTATCACCCATTGCAATCCACCTGTGACTTC...TGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR GCA 90 bp | CGAAAGCAAGCTCTGAGGAGTCCTGAGTGTGCACCATGGCGCTCCTGGGGTCCCAGAGCCCTGGGCCACTaGAGAGGCTGGGAAGACGCC | + |
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Preference number: 4 (lower is better) Translates to: RKQALRSPECAPWRSWGPRALGH*RGWEDA Trigger: GGCGTCTTCCCAGCCTCTGCAGTGGCCCAGGGCTCT...GGGACCCCAGGAGCGCCATGGTGCACACTCAGGACTCCTCAGAGCTTGCTTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR CCA 90 bp | CCTGAAAGCAGGGGCGGTGCCCTTCCAACTCCAGTGTGCCCCAGAAGAACCAGTAGACGCGCTCCGTCGTaGGTGGGAGCAGGTGGCACG | + |
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Preference number: 4 (lower is better) Translates to: PESRGGALPTPVCPRRTSRRAPS*VGAGGT Trigger: CGTGCCACCTGCTCCCACCCACGACGGAGCGCGTCT...ACTGGTTCTTCTGGGGCACACTGGAGTTGGAAGGGCACCGCCCCTGCTTTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR CCA 90 bp | CGAAAGCAAGCTCTGAGGAGTCCTGAGTGTGCACCATGGCGCTCCTGGGGTCCCACATCTCGGGAGGCCTaGGGGGTGTCTCGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: RKQALRSPECAPWRSWGPTSREA*GVSRTR Trigger: CCTGGTGCGAGACACCCCCCAGGCCTCCCGAGATGT...GGGACCCCAGGAGCGCCATGGTGCACACTCAGGACTCCTCAGAGCTTGCTTTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR TCA 90 bp | CCATGGCGCTCCTGGGGTCCCCTACTCCATGAGGCCCTAAAGATAGGAGTCTGTCGCTGCCAGGTCACCTaGGAGACGCGCTCCGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: PWRSWGPLLHEALKIGVCRCQVT*ETRSVV Trigger: CACGACGGAGCGCGTCTCTCAGGTGACCTGGCAGCG...ACAGACTCCTATCTTTAGGGCCTCATGGAGTAGGGGACCCCAGGAGCGCCATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR TCA 90 bp | CAAGCTCTGAGGAGTCCTGAGTGTGCACCATGGCGCTCCTGGGGTCCCCTACTCGGGCTCAGGGGATGCTaGCCTCCAGAAGACAGGACC | + |
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Preference number: 4 (lower is better) Translates to: QALRSPECAPWRSWGPLLGLRGC*PPEDRT Trigger: GGTCCTGTCTTCTGGAGGTCAGCATCCCCTGAGCCC...GAGTAGGGGACCCCAGGAGCGCCATGGTGCACACTCAGGACTCCTCAGAGCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR CCA 90 bp | GTCCAACCGGTCCCTAGCCATCGTTGCTGGCTGGCATTGGTGTGGTTGGCAGTGTGCCATCTGGCCTCATaGGCTCAGGGGATGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: VQPVPSHRCWLALVWLAVCHLAS*AQGMLT Trigger: GGTCAGCATCCCCTGAGCCCATGAGGCCAGATGGCA...CACTGCCAACCACACCAATGCCAGCCAGCAACGATGGCTAGGGACCGGTTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR GCA 90 bp | ACAAGGCATTTATTAGCTCCTGAGTGTTTCGGGGCCAGGGCTAGGCTGGGGCCGAAGCAGCCACAACTGTaGCATCCAGGCGCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TRHLLAPECFGARARLGPKQPQL*HPGAAR Trigger: CCTGGCAGCGCCTGGATGGCACAGTTGTGGCTGCTT...CGGCCCCAGCCTAGCCCTGGCCCCGAAACACTCAGGAGCTAATAAATGCCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR CCA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTAGACGCGCTCCGTCGTaGGTGGGAGCAGGTGGCACG | + |
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Preference number: 4 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSRRAPS*VGAGGT Trigger: CGTGCCACCTGCTCCCACCCACGACGGAGCGCGTCT...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR CCA 90 bp | TATCCTGAAAGCAGGGGCGGTGCCCTTCCAACTCCAGTGTGCCCCAGAAGAACCTTCCTCCCTGCCATCTaGCCTCATGGGCTCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: YPESRGGALPTPVCPRRTFLPAI*PHGLRG Trigger: TCCCCTGAGCCCATGAGGCCAGATGGCAGGGAGGAA...GGTTCTTCTGGGGCACACTGGAGTTGGAAGGGCACCGCCCCTGCTTTCAGGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR TCA 90 bp | TATCCTGAAAGCAGGGGCGGTGCCCTTCCAACTCCAGTGTGCCCCAGAAGAACCTGGGCTCCTGTTTCCTaGAGCAGGAGCAGTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: YPESRGGALPTPVCPRRTWAPVS*SRSSSS Trigger: GCTGCTACTGCTCCTGCTTCAGGAAACAGGAGCCCA...GGTTCTTCTGGGGCACACTGGAGTTGGAAGGGCACCGCCCCTGCTTTCAGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR TCA 90 bp | CCAACCCAGATGCCCAGATTCTCCATCACACACACATACACACACCATCCCCTACGCTGCCAGGTCACCTaGGAGACGCGCTCCGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: PTQMPRFSITHTYTHHPLRCQVT*ETRSVV Trigger: CACGACGGAGCGCGTCTCTCAGGTGACCTGGCAGCG...TAGGGGATGGTGTGTGTATGTGTGTGTGATGGAGAATCTGGGCATCTGGGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR TCA 90 bp | AGAAACCTGAGATTCCTGCCTGCAGGAGTAGGTGGAGATGGGGAGGTCCTACCTCACTGGGCTGTGCTCTaGGGCCCCCAAGGTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RNLRFLPAGVGGDGEVLPHWAVL*GPQGEE Trigger: CTCTTCACCTTGGGGGCCTCAGAGCACAGCCCAGTG...AGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR TCA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTCAACAGCAGGGGCCCTaGCCGCTCTTCCAGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSQQQGP*PLFQSG Trigger: CCCACTCTGGAAGAGCGGTCAGGGCCCCTGCTGTTG...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR GCA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTAGAGCCCTGGGCCACTaGAGAGGCTGGGAAGACGCC | + |
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Preference number: 4 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSRALGH*RGWEDA Trigger: GGCGTCTTCCCAGCCTCTGCAGTGGCCCAGGGCTCT...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR GCA 90 bp | GAGTCTGTGTGGTTCCACTTGTCCTCTATCCTGAAAGCAGGGGCGGTGCCCTTCCCTCATCTTCCTCCCTaGCATCTGGCCTCATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ESVWFHLSSILKAGAVPFPHLPP*HLASWA Trigger: AGCCCATGAGGCCAGATGGCAGGGAGGAAGATGAGG...GAAGGGCACCGCCCCTGCTTTCAGGATAGAGGACAAGTGGAACCACACAGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR CCA 90 bp | GTCCAACCGGTCCCTAGCCATCGTTGCTGGCTGGCATTGGTGTGGTTGGCAGTGCCAATTGTGACCTCCTaGGCTTCAGCGTGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQPVPSHRCWLALVWLAVPIVTS*ASAWFS Trigger: TGAGAACCACGCTGAAGCCCAGGAGGTCACAATTGG...CACTGCCAACCACACCAATGCCAGCCAGCAACGATGGCTAGGGACCGGTTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| 3UTR CAA 72 bp | GTCCAACCGGTCCCTAGCCATCGTTGCTGGCTGGCATaGGTGTGGTTGGCAGTGAGGGTGGAACTTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQPVPSHRCWLA*VWLAVRVELGV Trigger: AACACCAAGTTCCACCCTCACTGCCAACCACACCAATGCCAGCCAGCAACGATGGCTAGGGACCGGTTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS-3UTR CCA 90 bp | TCGTTGCTGGCTGGCATTGGTGTGGTTGGCAGTGAGGGTGGAACTTGGTGTTTCCACAGAGAGGGTCACTaGCAGCAGGATCGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLAGIGVVGSEGGTWCFHREGH*QQDRLF Trigger: GAAGAGCCGATCCTGCTGCCAGTGACCCTCTCTGTG...GAAACACCAAGTTCCACCCTCACTGCCAACCACACCAATGCCAGCCAGCAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTTGGGCTCCTGTTTCCTaGAGCAGGAGCAGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSWAPVS*SRSSSS Trigger: GCTGCTACTGCTCCTGCTTCAGGAAACAGGAGCCCA...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTCTCTCCACCCAGAGATaGGATCCAGGTGATTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSLSTQR*DPGDSG Trigger: GCCCGAATCACCTGGATCTCATCTCTGGGTGGAGAG...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR TCA 90 bp | CCAACCCAGATGCCCAGATTCTCCATCACACACACATACACACACCATCCCCTATCCTCATCCGCAGCTTaGAGCCTCTGCTCCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PTQMPRFSITHTYTHHPLSSSAA*SLCSFR Trigger: GCGGAAGGAGCAGAGGCTTCAAGCTGCGGATGAGGA...TAGGGGATGGTGTGTGTATGTGTGTGTGATGGAGAATCTGGGCATCTGGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR TCA 90 bp | AGAAACCTGAGATTCCTGCCTGCAGGAGTAGGTGGAGATGGGGAGGTCCTACCTCCCAAGGTGAAGAGTTaGGAGGGCATCTCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNLRFLPAGVGGDGEVLPPKVKS*EGISGS Trigger: GGAACCAGAGATGCCCTCTCAACTCTTCACCTTGGG...AGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR GCA 90 bp | GGAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCGCCTGTGCCAGCCACTaGGGTGGCGATGATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDKNLQVSSCAGLPASDIACASH*GGDDGS Trigger: GCTGCCATCATCGCCACCGCAGTGGCTGGCACAGGC...GATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | GAGTCTGTGTGGTTCCACTTGTCCTCTATCCTGAAAGCAGGGGCGGTGCCCTTCACTCCGAAGGATGGGTaGAAAGCAGCCACAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESVWFHLSSILKAGAVPFTPKDG*KAATTV Trigger: CACAGTTGTGGCTGCTTTCCACCCATCCTTCGGAGT...GAAGGGCACCGCCCCTGCTTTCAGGATAGAGGACAAGTGGAACCACACAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGCATTGGTGTGGTTGGCAGTGAGGGTGGAACTTGGTGTTTCCATGTGGCCAGCCTGTATCCCTaGCTCCTGAGTATCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGIGVVGSEGGTWCFHVASLYP*LLSIFG Trigger: GCCAAAGATACTCAGGAGCCAGGGATACAGGCTGGC...CACATGGAAACACCAAGTTCCACCCTCACTGCCAACCACACCAATGCCAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS-3UTR CCA 90 bp | GTCCAACCGGTCCCTAGCCATCGTTGCTGGCTGGCATTGGTGTGGTTGGCAGTGATAGTCTGTGGGCTCTaGGTTGCTTCGTACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: VQPVPSHRCWLALVWLAVIVCGL*VASYIT Trigger: TGTGATGTACGAAGCAACCCAGAGCCCACAGACTAT...CACTGCCAACCACACCAATGCCAGCCAGCAACGATGGCTAGGGACCGGTTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS-3UTR CCA 90 bp | GGGTCACAGGTGGTGCAGAAGGATATGGTGAGCTCCCTGCCAAGGGAGATAAAAACCGCTCTTCCAGAGTaGGCAGCTCGTGATACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSQVVQKDMVSSLPREIKTALPE*AARDTE Trigger: CTCGGTATCACGAGCTGCCCACTCTGGAAGAGCGGT...TTTTATCTCCCTTGGCAGGGAGCTCACCATATCCTTCTGCACCACCTGTGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTCCCCCTCCACAACATTaGGTCCTGGAGGCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSPPPQH*VLEAPE Trigger: TTCTGGTGCCTCCAGGACCCAATGTTGTGGAGGGGG...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | GAGTCTGTGTGGTTCCACTTGTCCTCTATCCTGAAAGCAGGGGCGGTGCCCTTCAGGGAGCCATCCAGATaGGACTCCATGTCGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ESVWFHLSSILKAGAVPFREPSR*DSMSSL Trigger: TAAGGACGACATGGAGTCCCATCTGGATGGCTCCCT...GAAGGGCACCGCCCCTGCTTTCAGGATAGAGGACAAGTGGAACCACACAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS-3UTR CCA 90 bp | AGAAACCTGAGATTCCTGCCTGCAGGAGTAGGTGGAGATGGGGAGGTCCTACCTATCCACTCCGAAGGATaGGTGGAAAGCAGCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: RNLRFLPAGVGGDGEVLPIHSEG*VESSHN Trigger: GTTGTGGCTGCTTTCCACCCATCCTTCGGAGTGGAT...AGGTAGGACCTCCCCATCTCCACCTACTCCTGCAGGCAGGAATCTCAGGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | GAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTATTGCCGCCAGCCTGTATCCCTaGCTCCTGAGTATCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQQGAPDPVLAYLLDSIAASLYP*LLSIFG Trigger: GCCAAAGATACTCAGGAGCCAGGGATACAGGCTGGC...GGCAATAGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | AGCCATCGTTGCTGGCTGGCATTGGTGTGGTTGGCAGTGAGGGTGGAACTTGGTCATCATAGCCGGAGATaGATACTTCTGGAGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHRCWLALVWLAVRVELGHHSRR*ILLEGS Trigger: GCTACCCTCCAGAAGTATCCATCTCCGGCTATGATG...ACCAAGTTCCACCCTCACTGCCAACCACACCAATGCCAGCCAGCAACGATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS-3UTR CCA 90 bp | GGGTCACAGGTGGTGCAGAAGGATATGGTGAGCTCCCTGCCAAGGGAGATAAAAACTCCGAAGGATGGGTaGAAAGCAGCCACAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSQVVQKDMVSSLPREIKTPKDG*KAATTV Trigger: CACAGTTGTGGCTGCTTTCCACCCATCCTTCGGAGT...TTTTATCTCCCTTGGCAGGGAGCTCACCATATCCTTCTGCACCACCTGTGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | GAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTATTGCCCCAATTGTGACCTCCTaGGCTTCAGCGTGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQQGAPDPVLAYLLDSIAPIVTS*ASAWFS Trigger: TGAGAACCACGCTGAAGCCCAGGAGGTCACAATTGG...GGCAATAGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | GGAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCGGCCTTCGGGGTGGGTaGTTTATAGGAGGGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDKNLQVSSCAGLPASDIGLRGG*FIGGRS Trigger: GGACCTCCCTCCTATAAACCACCCACCCCGAAGGCC...GATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | GAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTATTGCCCACAACATTGGGTCCTaGAGGCACCAGAAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQQGAPDPVLAYLLDSIAHNIGS*RHQKRR Trigger: CCTTCTCTTCTGGTGCCTCCAGGACCCAATGTTGTG...GGCAATAGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR TCA 90 bp | GAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCAGCTGTTGTCGGCAGATaGGGATGCCTGTGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EIKISRFPVVQVCLPQTSAVVGR*GCLCQP Trigger: TGGCTGGCACAGGCATCCTCATCTGCCGACAACAGC...TGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR TCA 90 bp | CCAACCCAGATGCCCAGATTCTCCATCACACACACATACACACACCATCCCCTATACCGAGGCATCTCCTaGTCAGCACAAGAGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: PTQMPRFSITHTYTHHPLYRGIS*SAQETP Trigger: TGGTGTCTCTTGTGCTGATCAGGAGATGCCTCGGTA...TAGGGGATGGTGTGTGTATGTGTGTGTGATGGAGAATCTGGGCATCTGGGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR GCA 90 bp | GAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCAAAGCAGCCACAACTGTaGCATCCAGGCGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EIKISRFPVVQVCLPQTSKQPQL*HPGAAR Trigger: CCTGGCAGCGCCTGGATGGCACAGTTGTGGCTGCTT...TGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR GCA 90 bp | TCGTTGCTGGCTGGCATTGGTGTGGTTGGCAGTGAGGGTGGAACTTGGTGTTTCCATGAGACCTTCCTCTaGCTTCATTTCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLAGIGVVGSEGGTWCFHETFL*LHFFLL Trigger: GAGGAGGAAGAAATGAAGGCAGAGGAAGGTCTCATG...GAAACACCAAGTTCCACCCTCACTGCCAACCACACCAATGCCAGCCAGCAACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS-3UTR CCA 90 bp | GAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCACTGCTCCTGCTGTGCTaGGTGACTCTCGCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EIKISRFPVVQVCLPQTSLLLLC*VTLAPG Trigger: TCCTGGTGCGAGAGTCACCCAGCACAGCAGGAGCAG...TGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | GAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCACACAGAGAGGGTCACTaGCAGCAGGATCGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIKISRFPVVQVCLPQTSHREGH*QQDRLF Trigger: GAAGAGCCGATCCTGCTGCCAGTGACCCTCTCTGTG...TGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | CCAACCCAGATGCCCAGATTCTCCATCACACACACATACACACACCATCCCCTACATCATAGCCGGAGATaGATACTTCTGGAGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTQMPRFSITHTYTHHPLHHSRR*ILLEGS Trigger: GCTACCCTCCAGAAGTATCCATCTCCGGCTATGATG...TAGGGGATGGTGTGTGTATGTGTGTGTGATGGAGAATCTGGGCATCTGGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTATAGTCTGTGGGCTCTaGGTTGCTTCGTACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSIVCGL*VASYIT Trigger: TGTGATGTACGAAGCAACCCAGAGCCCACAGACTAT...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS-3UTR CCA 90 bp | CCAACCCAGATGCCCAGATTCTCCATCACACACACATACACACACCATCCCCTAACCAGCATCAAAGTATaGCGTCTTCACTGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTQMPRFSITHTYTHHPLTSIKV*RLHWAV Trigger: CACAGCCCAGTGAAGACGCCATACTTTGATGCTGGT...TAGGGGATGGTGTGTGTATGTGTGTGTGATGGAGAATCTGGGCATCTGGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| 3UTR CAA 72 bp | GCAAGGCACACTTGCATTAGGTTCTCCCCTCTAGCATaGGACCTGGAATTCATGCTCTGGAGACAGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ARHTCIRFSPLA*DLEFMLWRQEP Trigger: AGGTTCCTGTCTCCAGAGCATGAATTCCAGGTCCAATGCTAGAGGGGAGAACCTAATGCAAGTGTGCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| 3UTR CAA 72 bp | CAGTTGTGCAGGTTTGCCTGCCTCAGACATCATAGATaGGACGTCATGGTGGAGTCACTAAGAAGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLCRFACLRHHR*DVMVESLRSHR Trigger: CCTGTGACTTCTTAGTGACTCCACCATGACGTCCAATCTATGATGTCTGAGGCAGGCAAACCTGCACAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| 3UTR CAA 72 bp | GGAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTaGCCTGCCTCAGACATCATAGATTGGACGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GDKNLQVSSCAG*PASDIIDWTSW Trigger: CCATGACGTCCAATCTATGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS GCA 90 bp | CGCGCTCCGTCGTGGGTGGGAGCAGGTGGCACGGTAACTCCACGGTaGCTCCCAAGCGGCCCCGGACCTCGGGAAGCACTCGTACCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAPSWVGAGGTVTPR*LPSGPGPREALVPA Trigger: TGCGGGTACGAGTGCTTCCCGAGGTCCGGGGCCGCTTGGGAGGCACCGTGGAGTTACCGTGCCACCTGCTCCCACCCACGACGGAGCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
||
| CDS CCA 90 bp | TGCCATCCAGGCGCTGCCAGGTCACCTGAGAGACGCGCTCCGTCGTaGGTGGGAGCAGGTGGCACGGTAACTCCACGGTGCCTCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CHPGAARSPERRAPS*VGAGGTVTPRCLPS Trigger: GCTTGGGAGGCACCGTGGAGTTACCGTGCCACCTGCTCCCACCCACGACGGAGCGCGTCTCTCAGGTGACCTGGCAGCGCCTGGATGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
||
| CDS TCA 90 bp | CAGTGGCCCCTGCTCCTGCTGTGCTGGGTGACTCTCGCACCAGGATaGCCTGCTCAGCACGGCCTGTCCCCACAGCGTTGGTGGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QWPLLLLCWVTLAPG*PAQHGLSPQRWWLY Trigger: GTACAGCCACCAACGCTGTGGGGACAGGCCGTGCTGAGCAGGTCATCCTGGTGCGAGAGTCACCCAGCACAGCAGGAGCAGGGGCCACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
||
| CDS TCA 90 bp | TGGAAAGCAGCCACAACTGTGCCATCCAGGCGCTGCCAGGTCACCTaGGAGACGCGCTCCGTCGTGGGTGGGAGCAGGTGGCACGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: WKAATTVPSRRCQVT*ETRSVVGGSRWHGN Trigger: GTTACCGTGCCACCTGCTCCCACCCACGACGGAGCGCGTCTCTCAGGTGACCTGGCAGCGCCTGGATGGCACAGTTGTGGCTGCTTTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
||
| CDS GCA 90 bp | TGGGGAAATCCACTCCGAAGGATGGGTGGAAAGCAGCCACAACTGTaGCATCCAGGCGCTGCCAGGTCACCTGAGAGACGCGCTCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WGNPLRRMGGKQPQL*HPGAARSPERRAPS Trigger: CGACGGAGCGCGTCTCTCAGGTGACCTGGCAGCGCCTGGATGGCACAGTTGTGGCTGCTTTCCACCCATCCTTCGGAGTGGATTTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
||
| CDS CCA 90 bp | ACACAGCGGGCTACAGCCACCGACTGGGGGCCAATTGTGACCTCCTaGGCTTCAGCGTGGTTCTCAGGCTGGGCTATGACTCTGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQRATATDWGPIVTS*ASAWFSGWAMTLSQ Trigger: CTGGCTCAGAGTCATAGCCCAGCCTGAGAACCACGCTGAAGCCCAGGAGGTCACAATTGGCCCCCAGTCGGTGGCTGTAGCCCGCTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
||
| CDS GCA 90 bp | CCCTGCGGGTACCGTTGGGAAACGTGGCAAACTCGCAGGTGTAATTaGCCTCGTCCTCTACCCTCAGTCCCCGGAAGGCCAGTGTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PCGYRWETWQTRRCN*PRPLPSVPGRPVWH Trigger: ATGCCACACTGGCCTTCCGGGGACTGAGGGTAGAGGACGAGGGCAATTACACCTGCGAGTTTGCCACGTTTCCCAACGGTACCCGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
||
| CDS TCA 90 bp | CTCATCTTCCTCCCTGCCATCTGGCCTCATGGGCTCAGGGGATGCTaGCCTCCAGAAGACAGGACCCCCGTTCCCAAACACCTGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIFLPAIWPHGLRGC*PPEDRTPVPKHLSL Trigger: AAGACTCAGGTGTTTGGGAACGGGGGTCCTGTCTTCTGGAGGTCAGCATCCCCTGAGCCCATGAGGCCAGATGGCAGGGAGGAAGATGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS GCA 90 bp | CTCTACCCTCAGTCCCCGGAAGGCCAGTGTGGCATCCCGCAGGTCTaGGTTTGTTTCTGGTCTCGCTCTGACAAAGGACAGACGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LYPQSPEGQCGIPQV*VCFWSRSDKGQTVL Trigger: AAGGACCGTCTGTCCTTTGTCAGAGCGAGACCAGAAACAAACGCAGACCTGCGGGATGCCACACTGGCCTTCCGGGGACTGAGGGTAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
||
| CDS CCA 90 bp | ACGGTCCTTGCTGAACTGAGAGTTGGGGAAATCCACTCCGAAGGATaGGTGGAAAGCAGCCACAACTGTGCCATCCAGGCGCTGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TVLAELRVGEIHSEG*VESSHNCAIQALPG Trigger: ACCTGGCAGCGCCTGGATGGCACAGTTGTGGCTGCTTTCCACCCATCCTTCGGAGTGGATTTCCCCAACTCTCAGTTCAGCAAGGACCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
||
| CDS CCA 90 bp | GCCGGAGATGGATACTTCTGGAGGGTAGCGCACAGAGAGGGTCACTaGCAGCAGGATCGGCTCTTCGAAGCTCTCGTGTTCCACTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: AGDGYFWRVAHREGH*QQDRLFEALVFHST Trigger: TGTAGAGTGGAACACGAGAGCTTCGAAGAGCCGATCCTGCTGCCAGTGACCCTCTCTGTGCGCTACCCTCCAGAAGTATCCATCTCCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
||
| CDS-3UTR CAA 90 bp | AACCAGTCCAACCGGTCCCTAGCCATCGTTGCTGGCTGGCATTGGTGTGGTTGGTCGTACCCGCACATCTaGGGCTCCTGTTTCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NQSNRSLAIVAGWHWCGWSYPHI*GSCFLK Trigger: CTTCAGGAAACAGGAGCCCAAGATGTGCGGGTACGA...CCAACCACACCAATGCCAGCCAGCAACGATGGCTAGGGACCGGTTGGACTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
||
| CDS-3UTR CAA 90 bp | AGGTCTGAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTTCTGGTTCCTCCAGCTaGGCCTTCGGGGTGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSEQQGAPDPVLAYLLDSSGSSS*AFGVGG Trigger: ACCACCCACCCCGAAGGCCAAGCTGGAGGAACCAGA...AGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTCAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR CAA 90 bp | GAGCAACAGGGAGCCCCTGATCCCGTTCTTGCATATCTGTTGGACTCTATTGCCCTGCTCCTTCCGCTGTaGTCGGCAGATGAGGATGCC | + |
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Preference number: 5 (lower is better) Translates to: EQQGAPDPVLAYLLDSIALLLPL*SADEDA Trigger: GGCATCCTCATCTGCCGACAACAGCGGAAGGAGCAG...GGCAATAGAGTCCAACAGATATGCAAGAACGGGATCAGGGGCTCCCTGTTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR CAA 90 bp | CGAAAGCAAGCTCTGAGGAGTCCTGAGTGTGCACCATGGCGCTCCTGGGGTCCCCAAACACCTGAGTCTTaGGATCGTAGGATCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RKQALRSPECAPWRSWGPQTPES*DRRILC Trigger: ACAGAGGATCCTACGATCCAAAGACTCAGGTGTTTG...GGGACCCCAGGAGCGCCATGGTGCACACTCAGGACTCCTCAGAGCTTGCTTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS-3UTR CAA 90 bp | GGGTCACAGGTGGTGCAGAAGGATATGGTGAGCTCCCTGCCAAGGGAGATAAAATTCCTCATCCGCAGCTaGAAGCCTCTGCTCCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: GSQVVQKDMVSSLPREIKFLIRS*KPLLLP Trigger: CGGAAGGAGCAGAGGCTTCAAGCTGCGGATGAGGAA...TTTTATCTCCCTTGGCAGGGAGCTCACCATATCCTTCTGCACCACCTGTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR CAA 90 bp | GAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCAACCCCCTCCACAACATaGGGTCCTGGAGGCACCAGA | + |
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Preference number: 5 (lower is better) Translates to: EIKISRFPVVQVCLPQTSTPSTT*GPGGTR Trigger: TCTGGTGCCTCCAGGACCCAATGTTGTGGAGGGGGT...TGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS-3UTR CAA 90 bp | GAGATAAAAATCTCCAGGTTTCCAGTTGTGCAGGTTTGCCTGCCTCAGACATCATCGTACCCGCACATCTaGGGCTCCTGTTTCCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: EIKISRFPVVQVCLPQTSSYPHI*GSCFLK Trigger: CTTCAGGAAACAGGAGCCCAAGATGTGCGGGTACGA...TGATGTCTGAGGCAGGCAAACCTGCACAACTGGAAACCTGGAGATTTTTATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS GCA 72 bp | TCGTGGGTGGGAGCAGGTGGCACGGTAACTCCACGGTaGCTCCCAAGCGGCCCCGGACCTCGGGAAGCACTC | + |
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Preference number: 6 (lower is better) Translates to: SWVGAGGTVTPR*LPSGPGPREAL Trigger: GAGTGCTTCCCGAGGTCCGGGGCCGCTTGGGAGGCACCGTGGAGTTACCGTGCCACCTGCTCCCACCCACGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CCA 72 bp | GGCGCTGCCAGGTCACCTGAGAGACGCGCTCCGTCGTaGGTGGGAGCAGGTGGCACGGTAACTCCACGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GAARSPERRAPS*VGAGGTVTPRC Trigger: GCACCGTGGAGTTACCGTGCCACCTGCTCCCACCCACGACGGAGCGCGTCTCTCAGGTGACCTGGCAGCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS TCA 72 bp | GCCACAACTGTGCCATCCAGGCGCTGCCAGGTCACCTaGGAGACGCGCTCCGTCGTGGGTGGGAGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ATTVPSRRCQVT*ETRSVVGGSRW Trigger: CCACCTGCTCCCACCCACGACGGAGCGCGTCTCTCAGGTGACCTGGCAGCGCCTGGATGGCACAGTTGTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS GCA 72 bp | CCTGCTGTGCTGGGTGACTCTCGCACCAGGATGACCTaGTCAGCACGGCCTGTCCCCACAGCGTTGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PAVLGDSRTRMT*SARPVPTALVA Trigger: AGCCACCAACGCTGTGGGGACAGGCCGTGCTGAGCAGGTCATCCTGGTGCGAGAGTCACCCAGCACAGCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS TCA 72 bp | CTCCCTGCCATCTGGCCTCATGGGCTCAGGGGATGCTaGCCTCCAGAAGACAGGACCCCCGTTCCCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: LPAIWPHGLRGC*PPEDRTPVPKH Trigger: GTGTTTGGGAACGGGGGTCCTGTCTTCTGGAGGTCAGCATCCCCTGAGCCCATGAGGCCAGATGGCAGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS CAA 90 bp | AGGATCGGCTCTTCGAAGCTCTCGTGTTCCACTCTACACGTGACCTaGACGCCATCCGCTCGGCCCACGGGCACCAAGGAGTATCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RIGSSKLSCSTLHVT*TPSARPTGTKEYRL Trigger: CAGCCGATACTCCTTGGTGCCCGTGGGCCGAGCGGATGGCGTCAAGGTCACGTGTAGAGTGGAACACGAGAGCTTCGAAGAGCCGATCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CCA 72 bp | GACTGGGGGCCAATTGTGACCTCCTGGGCTTCAGCGTaGTTCTCAGGCTGGGCTATGACTCTGAGCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: DWGPIVTSWASA*FSGWAMTLSQV Trigger: GACCTGGCTCAGAGTCATAGCCCAGCCTGAGAACCACGCTGAAGCCCAGGAGGTCACAATTGGCCCCCAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CCA 72 bp | GCTACAGCCACCGACTGGGGGCCAATTGTGACCTCCTaGGCTTCAGCGTGGTTCTCAGGCTGGGCTATGACT | + |
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Preference number: 6 (lower is better) Translates to: ATATDWGPIVTS*ASAWFSGWAMT Trigger: AGTCATAGCCCAGCCTGAGAACCACGCTGAAGCCCAGGAGGTCACAATTGGCCCCCAGTCGGTGGCTGTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CAA 72 bp | CTCATCCGCAGCTTGAAGCCTCTGCTCCTTCCGCTGTaGTCGGCAGATGAGGATGCCTGTGCCAGCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: LIRSLKPLLLPL*SADEDACASHC Trigger: GCAGTGGCTGGCACAGGCATCCTCATCTGCCGACAACAGCGGAAGGAGCAGAGGCTTCAAGCTGCGGATGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS TCA 72 bp | AGCACTCGTACCCGCACATCTTGGGCTCCTGTTTCCTaGAGCAGGAGCAGTAGCAGCGGCAACAACGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: STRTRTSWAPVS*SRSSSSGNNGS Trigger: GCTGCCGTTGTTGCCGCTGCTACTGCTCCTGCTTCAGGAAACAGGAGCCCAAGATGTGCGGGTACGAGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS GCA 72 bp | CAGTCCCCGGAAGGCCAGTGTGGCATCCCGCAGGTCTaGGTTTGTTTCTGGTCTCGCTCTGACAAAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: QSPEGQCGIPQV*VCFWSRSDKGQ Trigger: CTGTCCTTTGTCAGAGCGAGACCAGAAACAAACGCAGACCTGCGGGATGCCACACTGGCCTTCCGGGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CCA 72 bp | GAGACTCAGGGAAACCCCCTCCACAACATTGGGTCCTaGAGGCACCAGAAGAGAAGGTCCCAGGCCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: ETQGNPLHNIGS*RHQKRRSQACS Trigger: GCTACAGGCCTGGGACCTTCTCTTCTGGTGCCTCCAGGACCCAATGTTGTGGAGGGGGTTTCCCTGAGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS CAA 90 bp | TTCTTCTTCCTCATCCGCAGCTTGAAGCCTCTGCTCCTTCCGCTGTaGTCGGCAGATGAGGATGCCTGTGCCAGCCACTGCGGTGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: FFFLIRSLKPLLLPL*SADEDACASHCGGD Trigger: ATCGCCACCGCAGTGGCTGGCACAGGCATCCTCATCTGCCGACAACAGCGGAAGGAGCAGAGGCTTCAAGCTGCGGATGAGGAAGAAGAA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS CAA 90 bp | TCTTCCTCCTCATCTTCGAGACTCAGGGAAACCCCCTCCACAACATaGGGTCCTGGAGGCACCAGAAGAGAAGGTCCCAGGCCTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSRLRETPSTT*GPGGTRREGPRPVA Trigger: GGCTACAGGCCTGGGACCTTCTCTTCTGGTGCCTCCAGGACCCAATGTTGTGGAGGGGGTTTCCCTGAGTCTCGAAGATGAGGAGGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS CCA 72 bp | GGCCAGTGTGGCATCCCGCAGGTCTGCGTTTGTTTCTaGTCTCGCTCTGACAAAGGACAGACGGTCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GQCGIPQVCVCF*SRSDKGQTVLA Trigger: AGCAAGGACCGTCTGTCCTTTGTCAGAGCGAGACCAGAAACAAACGCAGACCTGCGGGATGCCACACTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CCA 72 bp | CATCTTCGAGACTCAGGGAAACCCCCTCCACAACATTaGGTCCTGGAGGCACCAGAAGAGAAGGTCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: HLRDSGKPPPQH*VLEAPEEKVPG Trigger: GCCTGGGACCTTCTCTTCTGGTGCCTCCAGGACCCAATGTTGTGGAGGGGGTTTCCCTGAGTCTCGAAGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS CAA 90 bp | TCTCGCACCAGGATGACCTGCTCAGCACGGCCTGTCCCCACAGCGTaGGTGGCTGTACAGATGAAGGTAGTGTTGACCATTCGATCCACA | + |
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Preference number: 6 (lower is better) Translates to: SRTRMTCSARPVPTA*VAVQMKVVLTIRST Trigger: TGTGGATCGAATGGTCAACACTACCTTCATCTGTACAGCCACCAACGCTGTGGGGACAGGCCGTGCTGAGCAGGTCATCCTGGTGCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CCA 72 bp | GCTGAACTGAGAGTTGGGGAAATCCACTCCGAAGGATaGGTGGAAAGCAGCCACAACTGTGCCATCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: AELRVGEIHSEG*VESSHNCAIQA Trigger: CGCCTGGATGGCACAGTTGTGGCTGCTTTCCACCCATCCTTCGGAGTGGATTTCCCCAACTCTCAGTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CAA 72 bp | TCATCTTCGAGACTCAGGGAAACCCCCTCCACAACATaGGGTCCTGGAGGCACCAGAAGAGAAGGTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSRLRETPSTT*GPGGTRREGPR Trigger: CCTGGGACCTTCTCTTCTGGTGCCTCCAGGACCCAATGTTGTGGAGGGGGTTTCCCTGAGTCTCGAAGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS CAA 90 bp | CTGACCTCCAGAAGACAGGACCCCCGTTCCCAAACACCTGAGTCTTaGGATCGTAGGATCCTCTGTCGCCATCATTTCCTCCTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LTSRRQDPRSQTPES*DRRILCRHHFLLLQ Trigger: CTGGAGGAGGAGGAAATGATGGCGACAGAGGATCCTACGATCCAAAGACTCAGGTGTTTGGGAACGGGGGTCCTGTCTTCTGGAGGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS TCA 72 bp | CTCGCTCTGACAAAGGACAGACGGTCCTTGCTGAACTaGGAGTTGGGGAAATCCACTCCGAAGGATGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LALTKDRRSLLN*ELGKSTPKDGW Trigger: CCACCCATCCTTCGGAGTGGATTTCCCCAACTCTCAGTTCAGCAAGGACCGTCTGTCCTTTGTCAGAGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CAA 72 bp | AGGATGACCTGCTCAGCACGGCCTGTCCCCACAGCGTaGGTGGCTGTACAGATGAAGGTAGTGTTGACCATT | + |
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Preference number: 6 (lower is better) Translates to: RMTCSARPVPTA*VAVQMKVVLTI Trigger: AATGGTCAACACTACCTTCATCTGTACAGCCACCAACGCTGTGGGGACAGGCCGTGCTGAGCAGGTCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CAA 90 bp | TTTATAGGAGGGAGGTCCTTCCAGTTCTTCTTCCTCATCCGCAGCTaGAAGCCTCTGCTCCTTCCGCTGTTGTCGGCAGATGAGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: FIGGRSFQFFFLIRS*KPLLLPLLSADEDA Trigger: GGCATCCTCATCTGCCGACAACAGCGGAAGGAGCAGAGGCTTCAAGCTGCGGATGAGGAAGAAGAACTGGAAGGACCTCCCTCCTATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075447.14 |
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| CDS TCA 72 bp | ATGATAGTGACGGTGCCAGCCTGTATCCCTGGCTCCTaGGTATCTTTGGCCTCTCCACCCAGAGATGAGATC | + |
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Preference number: 6 (lower is better) Translates to: MIVTVPACIPGS*VSLASPPRDEI Trigger: GATCTCATCTCTGGGTGGAGAGGCCAAAGATACTCAGGAGCCAGGGATACAGGCTGGCACCGTCACTATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075447.14 ENSMUST00000108450.5 |
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| CDS CCA 72 bp | GAAGACAGGACCCCCGTTCCCAAACACCTGAGTCTTTaGATCGTAGGATCCTCTGTCGCCATCATTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: EDRTPVPKHLSL*IVGSSVAIISS Trigger: GGAGGAAATGATGGCGACAGAGGATCCTACGATCCAAAGACTCAGGTGTTTGGGAACGGGGGTCCTGTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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| CDS CAA 72 bp | AGAAGACAGGACCCCCGTTCCCAAACACCTGAGTCTTaGGATCGTAGGATCCTCTGTCGCCATCATTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RRQDPRSQTPES*DRRILCRHHFL Trigger: GAGGAAATGATGGCGACAGAGGATCCTACGATCCAAAGACTCAGGTGTTTGGGAACGGGGGTCCTGTCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108450.5 |
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