Pregenerated sensors for NECAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028923Ensembl transcript IDs: ENSMUST00000030760.15, ENSMUST00000153721.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCATGGCTaGCTCCGGGGCTCAGGGCAGCGAGAAGGGTGTGTCAGAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: ALCSWLPGMQAASHG*LRGSGQREGCVRGR Trigger: TCTGCCTCTGACACACCCTTCTCGCTGCCCTGAGCCCCGGAGGCAGCCATGGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CCA 90 bp | GGGCGATGGGCTTGCAAAGGCCCTGGAGTGTTTGCTCTCGTTTCCTaGCTGAGCAGCACCTGGGCCCAACCAACAGTGTGGCAAGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: GRWACKGPGVFALVS*LSSTWAQPTVWQGA Trigger: GGCACCTTGCCACACTGTTGGTTGGGCCCAGGTGCTGCTCAGCCAGGAAACGAGAGCAAACACTCCAGGGCCTTTGCAAGCCCATCGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CCA 90 bp | ATCCATTCTGTGCTTTGGGGGCTGTGTTTAATAAGGATCTCTTGGTaGAGGAAGGCAGGTCTGGGTGTCTCCAGTGAGGAGGGCGATGGG | + |
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Preference number: 1 (lower is better) Translates to: IHSVLWGLCLIRISW*RKAGLGVSSEEGDG Trigger: CCCATCGCCCTCCTCACTGGAGACACCCAGACCTGCCTTCCTCCACCAAGAGATCCTTATTAAACACAGCCCCCAAAGCACAGAATGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR GCA 90 bp | TGCAGAAGGTCCCTGTCCAACAGCAAATCTGGGACACCTGCCAACTaGAGAGGCAGAGCTGAACCCAGGCCACAAATTGAATCCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: CRRSLSNSKSGTPAN*RGRAEPRPQIESIL Trigger: CAGAATGGATTCAATTTGTGGCCTGGGTTCAGCTCTGCCTCTGCAGTTGGCAGGTGTCCCAGATTTGCTGTTGGACAGGGACCTTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTGGCAGCGGCAGCAGGCTTAGATTGTGGCCAGAGTTCTGTGGCACCTCCGGTGGGCCTGGCTCTTaGGGTACCAGCTGCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSGSGSRLRLWPEFCGTSGGPGS*GTSCSF Trigger: GAAGGAGCAGCTGGTACCCCAAGAGCCAGGCCCACC...GGAGGTGCCACAGAACTCTGGCCACAATCTAAGCCTGCTGCCGCTGCCACTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
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| 3UTR-3UTR CCA 90 bp | CAGATATCAGCAGTGGCAGCGGCAGCAGGCTTAGATTGTGGCCAGAGTTCTGTGGCCCTCCTGCGCTGGTaGGCCTGGCTCTTGGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: QISAVAAAAGLDCGQSSVALLRW*AWLLGY Trigger: GTACCCCAAGAGCCAGGCCCACCAGCGCAGGAGGGC...CACAGAACTCTGGCCACAATCTAAGCCTGCTGCCGCTGCCACTGCTGATATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGTGGCAGCGGCAGCAGGCTTAGATTGTGGCCAGAGTTCTGTGGCACCTCCTCAGGGCAGGACAGATaGTCCCAAAGGGCTCCGTCT | + |
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Preference number: 2 (lower is better) Translates to: SSGSGSRLRLWPEFCGTSSGQDR*SQRAPS Trigger: AGACGGAGCCCTTTGGGAGCATCTGTCCTGCCCTGA...GGAGGTGCCACAGAACTCTGGCCACAATCTAAGCCTGCTGCCGCTGCCACTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCTTTGCTCTCGTTTCCTaGCTGAGCAGCACCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SVSPQHCAAGFQVCRLPPFALVS*LSSTWA Trigger: GGCCCAGGTGCTGCTCAGCCAGGAAACGAGAGCAAA...GGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAAACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTAGGCAGGGAGCACTCTaGCACCTTCCGTGGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: QLSGRTPLEGTKGYYGWSRQGAL*HLPWVR Trigger: CCTGACCCACGGAAGGTGGCAGAGTGCTCCCTGCCT...ACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGTCCAACAGCAAATCTaGGACACCTGCCAACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QLSGRTPLEGTKGYYGWSVQQQI*DTCQLQ Trigger: CTGCAGTTGGCAGGTGTCCCAGATTTGCTGTTGGAC...ACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CAA 90 bp | GAGGCAGAGCTGAACCCAGGCCACAAATTGAATCCATTCTGTGCTTaGGGGGCTGTGTTTAATAAGGATCTCTTGGTGGAGGAAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: EAELNPGHKLNPFCA*GAVFNKDLLVEEGR Trigger: CCTGCCTTCCTCCACCAAGAGATCCTTATTAAACACAGCCCCCAAAGCACAGAATGGATTCAATTTGTGGCCTGGGTTCAGCTCTGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CAA 90 bp | GGACACCTGCCAACTGCAGAGGCAGAGCTGAACCCAGGCCACAAATaGAATCCATTCTGTGCTTTGGGGGCTGTGTTTAATAAGGATCTC | + |
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Preference number: 2 (lower is better) Translates to: GHLPTAEAELNPGHK*NPFCALGAVFNKDL Trigger: GAGATCCTTATTAAACACAGCCCCCAAAGCACAGAATGGATTCAATTTGTGGCCTGGGTTCAGCTCTGCCTCTGCAGTTGGCAGGTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR-3UTR GCA 90 bp | TTGCCAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGACTTACTGCTTCTTGTaGTCAGGCTGTCAAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LPALGKDSSGRYQRLLWMTYCFL*SGCQAS Trigger: GCTGGCTTGACAGCCTGAGCACAAGAAGCAGTAAGT...CATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAAGGTCCCTGTCCAATCCATTCTGTGCTTTaGGGGCTGTGTTTAATAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLEGTKGYYGWSAEGPCPIHSVL*GLCLIR Trigger: CCTTATTAAACACAGCCCCCAAAGCACAGAATGGAT...TGGACAGGGACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CCA 72 bp | CCGGAGGAGGGGGCAGCAGGCTCAGCCCTCCTGCGCTaGTGGGCCTGGCTCTTGGGGTACCAGCTGCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: PEEGAAGSALLR*WAWLLGYQLLL Trigger: AAGGAGCAGCTGGTACCCCAAGAGCCAGGCCCACCAGCGCAGGAGGGCTGAGCCTGCTGCCCCCTCCTCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
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| 3UTR GCA 72 bp | AGCTGGCTTCCAGGTATGCAGGCTGCCTCCCATGGCTaGCTCCGGGGCTCAGGGCAGCGAGAAGGGTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: SWLPGMQAASHG*LRGSGQREGCV Trigger: GACACACCCTTCTCGCTGCCCTGAGCCCCGGAGGCAGCCATGGGAGGCAGCCTGCATACCTGGAAGCCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR GCA 72 bp | GTTTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATaGAGGCTGCCTCCCATGGCTGCCTCCGGGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: VSPQHCAAGFQV*RLPPMAASGAQ Trigger: CTGAGCCCCGGAGGCAGCCATGGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CCA 72 bp | ACAGCTTCCCTCCAGAAGCCACCAGGGACCGTCAAGTaGGCCAGCTATGAGCCCAGAGGGAGCAGCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: TASLQKPPGTVK*ASYEPRGSSSQ Trigger: CTGGCTGCTGCTCCCTCTGGGCTCATAGCTGGCCCACTTGACGGTCCCTGGTGGCTTCTGGAGGGAAGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR GCA 72 bp | AGGAGGGCGATGGGCTTGCAAAGGCCCTGGAGTGTTTaGTCTCGTTTCCTGGCTGAGCAGCACCTGGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: RRAMGLQRPWSV*SRFLAEQHLGP Trigger: TGGGCCCAGGTGCTGCTCAGCCAGGAAACGAGAGCAAACACTCCAGGGCCTTTGCAAGCCCATCGCCCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CCA 72 bp | GCTTGCAAAGGCCCTGGAGTGTTTGCTCTCGTTTCCTaGCTGAGCAGCACCTGGGCCCAACCAACAGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: ACKGPGVFALVS*LSSTWAQPTVW Trigger: CCACACTGTTGGTTGGGCCCAGGTGCTGCTCAGCCAGGAAACGAGAGCAAACACTCCAGGGCCTTTGCAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CCA 72 bp | TCCTGGCTGAGCAGCACCTGGGCCCAACCAACAGTGTaGCAAGGTGCCAACTTACTGCTTCTTGTGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: SWLSSTWAQPTV*QGANLLLLVLR Trigger: CCTGAGCACAAGAAGCAGTAAGTTGGCACCTTGCCACACTGTTGGTTGGGCCCAGGTGCTGCTCAGCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR-3UTR CAA 90 bp | AGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAAGGTCCCAGGAGGGCGATGGGCTaGCAAAGGCCCTGGAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: RTPLEGTKGYYGWSAEGPRRAMG*QRPWSV Trigger: AACACTCCAGGGCCTTTGCAAGCCCATCGCCCTCCT...GGGACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR-3UTR CAA 90 bp | TTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCATGGCTTTAATAAGGATCTCTaGGTGGAGGAAGGCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: FPTALCSWLPGMQAASHGFNKDL*VEEGRS Trigger: AGACCTGCCTTCCTCCACCAAGAGATCCTTATTAAA...GCCATGGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CCA 72 bp | TCTGTGCTTTGGGGGCTGTGTTTAATAAGGATCTCTTaGTGGAGGAAGGCAGGTCTGGGTGTCTCCAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: SVLWGLCLIRIS*WRKAGLGVSSE Trigger: CTCACTGGAGACACCCAGACCTGCCTTCCTCCACCAAGAGATCCTTATTAAACACAGCCCCCAAAGCACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CCA 72 bp | GGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATaGATGGAGTGCAGAAGGTCCCTGTCCAACAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: GKDSSGRYQRLL*MECRRSLSNSK Trigger: TTTGCTGTTGGACAGGGACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR GCA 72 bp | TCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTaGAGAAGGTCCCTGTCCAACAGCAAATCTGGGACA | + |
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Preference number: 3 (lower is better) Translates to: SSGRYQRLLWME*RRSLSNSKSGT Trigger: TGTCCCAGATTTGCTGTTGGACAGGGACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CCA 72 bp | AGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATaGAGTGCAGAAGGTCCCTGTCCAACAGCAAATCTG | + |
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Preference number: 3 (lower is better) Translates to: RTPLEGTKGYYG*SAEGPCPTANL Trigger: CAGATTTGCTGTTGGACAGGGACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR-3UTR CAA 90 bp | TTGCCAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGAATCCATTCTGTGCTTaGGGGGCTGTGTTTAATAAG | + |
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Preference number: 3 (lower is better) Translates to: LPALGKDSSGRYQRLLWMNPFCA*GAVFNK Trigger: CTTATTAAACACAGCCCCCAAAGCACAGAATGGATT...CATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR CCA 90 bp | GGACCGTCAAGTGGGCCAGCTATGAGCCCAGAGGGAGCAGCAGCCAGGCAGCCTTCAGCCCTCCTGCGCTaGTGGGCCTGGCTCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GPSSGPAMSPEGAAARQPSALLR*WAWLLG Trigger: CCCCAAGAGCCAGGCCCACCAGCGCAGGAGGGCTGA...AGGCTGCCTGGCTGCTGCTCCCTCTGGGCTCATAGCTGGCCCACTTGACGGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR TCA 90 bp | CTGTTTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCACAGCCGGTGCCTGGCTaGGACTGGCTGGAGGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LFPHSTVQLASRYAGCLPQPVPG*DWLEGD Trigger: GTCCCCCTCCAGCCAGTCTCAGCCAGGCACCGGCTG...TGGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAAACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CAA 72 bp | GCAGGCTCAGCCCTCCTGCGCTGGTGGGCCTGGCTCTaGGGGTACCAGCTGCTCCTTCCTTCTTCCTCATGT | + |
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Preference number: 4 (lower is better) Translates to: AGSALLRWWAWL*GYQLLLPSSSC Trigger: ACATGAGGAAGAAGGAAGGAGCAGCTGGTACCCCAAGAGCCAGGCCCACCAGCGCAGGAGGGCTGAGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
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| CDS-3UTR TCA 90 bp | CACCAGGGACCGTCAAGTGGGCCAGCTATGAGCCCAGAGGGAGCAGCAGCCAGGCGTGGACCTCCGGCTTaGCACACAGAACAGACTCGT | + |
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Preference number: 4 (lower is better) Translates to: HQGPSSGPAMSPEGAAARRGPPA*HTEQTR Trigger: ACGAGTCTGTTCTGTGTGTCAAGCCGGAGGTCCACG...CCTGGCTGCTGCTCCCTCTGGGCTCATAGCTGGCCCACTTGACGGTCCCTGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR GCA 90 bp | TCTGTTTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCGTCCACGGGGGCCTGTaGGAAGAGCTCCCCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SVSPQHCAAGFQVCRLPPVHGGL*EELPRG Trigger: ACCTCTGGGGAGCTCTTCGCACAGGCCCCCGTGGAC...GGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAAACAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR GCA 90 bp | TGGAGTGTTTGCTCTCGTTTCCTGGCTGAGCAGCACCTGGGCCCAACCAACAGTCAGGCTCAGCCCTCCTaGGCTGGTGGGCCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: WSVCSRFLAEQHLGPTNSQAQPS*AGGPGS Trigger: AGAGCCAGGCCCACCAGCGCAGGAGGGCTGAGCCTG...ACTGTTGGTTGGGCCCAGGTGCTGCTCAGCCAGGAAACGAGAGCAAACACTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR CCA 90 bp | TGGAGTGTTTGCTCTCGTTTCCTGGCTGAGCAGCACCTGGGCCCAACCAACAGTGCCCTCCTGCGCTGGTaGGCCTGGCTCTTGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: WSVCSRFLAEQHLGPTNSALLRW*AWLLGY Trigger: GTACCCCAAGAGCCAGGCCCACCAGCGCAGGAGGGC...ACTGTTGGTTGGGCCCAGGTGCTGCTCAGCCAGGAAACGAGAGCAAACACTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR TCA 90 bp | TGCCAACTTACTGCTTCTTGTGCTCAGGCTGTCAAGCCAGCCAGGCAAGGGGCCTGGTCTGGCCGTCCTTaGAGCCCAGGTCCAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: CQLTASCAQAVKPARQGAWSGRP*SPGPTW Trigger: CCAAGTTGGACCTGGGCTTCAAGGACGGCCAGACCA...GGCCCCTTGCCTGGCTGGCTTGACAGCCTGAGCACAAGAAGCAGTAAGTTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CAA 72 bp | CAGGTCTGGGTGTCTCCAGTGAGGAGGGCGATGGGCTaGCAAAGGCCCTGGAGTGTTTGCTCTCGTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QVWVSPVRRAMG*QRPWSVCSRFL Trigger: CAGGAAACGAGAGCAAACACTCCAGGGCCTTTGCAAGCCCATCGCCCTCCTCACTGGAGACACCCAGACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR GCA 90 bp | GAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAAGGTCTGGCCCGCGGCGGGATaGGGTAGACGTGGACCTCCG | + |
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Preference number: 4 (lower is better) Translates to: EGLLWKVPKAIMDGVQKVWPAAG*GRRGPP Trigger: CGGAGGTCCACGTCTACCGCATCCCGCCGCGGGCCA...GACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR TCA 90 bp | AGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAAGGTCCCCCTTCCCTTTCGCAGTaGTCCGCAGCCGGCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: RTPLEGTKGYYGWSAEGPPSLSQ*SAAGHS Trigger: GGAGTGGCCGGCTGCGGATCACTGCGAAAGGGAAGG...GGGACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR TCA 90 bp | TTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCATGGCGCTGCTTCACCCACTTaGAATGGTCCTGTAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: FPTALCSWLPGMQAASHGAASPT*NGPVMP Trigger: TGGCATTACAGGACCATTTCAAGTGGGTGAAGCAGC...GCCATGGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR CCA 90 bp | CTGTTTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCAGTGGCCAGAGTTCTGTaGCACCTCCTGAACCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LFPHSTVQLASRYAGCLPVARVL*HLLNQK Trigger: TTTCTGGTTCAGGAGGTGCCACAGAACTCTGGCCAC...TGGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR GCA 90 bp | TTCAAAAAGCTGCTTACTCCCTTCCAGTGTCCCCCGACAGCCCATTCAAGCTACCACTCTCCACTGCGGTaGCGGGAAACTGGTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: FKKLLTPFQCPPTAHSSYHSPLR*RETGPR Trigger: CCGTGGACCAGTTTCCCGGCACCGCAGTGGAGAGTG...GTAGCTTGAATGGGCTGTCGGGGGACACTGGAAGGGAGTAAGCAGCTTTTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR CCA 90 bp | TCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAATGTAACCACGGTTGGTaGCCCGCGGCGGGATGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SGRTPLEGTKGYYGWSAECNHGW*PAAGCG Trigger: ACCGCATCCCGCCGCGGGCCACCAACCGTGGTTACA...TTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR CCA 90 bp | TTGCCAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGGTGGGCCTGGCTCTTaGGGTACCAGCTGCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPALGKDSSGRYQRLLWMGGPGS*GTSCSF Trigger: GAAGGAGCAGCTGGTACCCCAAGAGCCAGGCCCACC...CATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CAA 72 bp | AACCAACAGTGTGGCAAGGTGCCAACTTACTGCTTCTaGTGCTCAGGCTGTCAAGCCAGCCAGGCAAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NQQCGKVPTYCF*CSGCQASQARG Trigger: GCCCCTTGCCTGGCTGGCTTGACAGCCTGAGCACAAGAAGCAGTAAGTTGGCACCTTGCCACACTGTTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| 3UTR CAA 72 bp | TCCCCCGACAGCCCATTCAAGCTACAGCTCAAAGACTaGCCAGCTCTCGGGAAGGACTCCTCTGGAAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SPDSPFKLQLKD*PALGKDSSGRY Trigger: GTACCTTCCAGAGGAGTCCTTCCCGAGAGCTGGCAAGTCTTTGAGCTGTAGCTTGAATGGGCTGTCGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR TCA 90 bp | GGATCTCTTGGTGGAGGAAGGCAGGTCTGGGTGTCTCCAGTGAGGAGGGCGATGCATCTTCAATTCGGATaGCGAAGTACCTGCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GSLGGGRQVWVSPVRRAMHLQFG*RSTCWS Trigger: ACTCCAGCAGGTACTTCGTCATCCGAATTGAAGATG...CATCGCCCTCCTCACTGGAGACACCCAGACCTGCCTTCCTCCACCAAGAGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
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| CDS-3UTR TCA 90 bp | GCAGGCTTAGATTGTGGCCAGAGTTCTGTGGCACCTCCTGAACCAGAAACAACTTGGTCTGGCCGTCCTTaGAGCCCAGGTCCAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: AGLDCGQSSVAPPEPETTWSGRP*SPGPTW Trigger: CCAAGTTGGACCTGGGCTTCAAGGACGGCCAGACCA...AGTTGTTTCTGGTTCAGGAGGTGCCACAGAACTCTGGCCACAATCTAAGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
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| CDS-3UTR TCA 90 bp | CAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTCTCCAGAGGGAGGGATaGCAGTGGAACTCTTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLSGRTPLEGTKGYYGWSLQREG*QWNSCP Trigger: GGGGCAAGAGTTCCACTGTCATCCCTCCCTCTGGAG...ACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCGCAAACTCACACTGCTaGTTCACCCACTTGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSPQHCAAGFQVCRLPPANSHC*FTHLKW Trigger: CCATTTCAAGTGGGTGAAGCAGCAGTGTGAGTTTGC...GGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CCA 90 bp | TTGCCAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGCTGGCTGAGACTGGCTaGAGGGGGACCCTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPALGKDSSGRYQRLLWMLAETG*RGTLWI Trigger: AATCCACAGGGTCCCCCTCCAGCCAGTCTCAGCCAG...CATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTGGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR TCA 90 bp | TGGAGTGTTTGCTCTCGTTTCCTGGCTGAGCAGCACCTGGGCCCAACCAACAGTACCCTGTGGATTTGGTaGAGTCTCCCCAGATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSVCSRFLAEQHLGPTNSTLWIW*SLPRYQ Trigger: CTGATATCTGGGGAGACTTCACCAAATCCACAGGGT...ACTGTTGGTTGGGCCCAGGTGCTGCTCAGCCAGGAAACGAGAGCAAACACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAAGGTCCCGGCCACTCCACGATaGCTGGTCCAGTTGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: EGLLWKVPKAIMDGVQKVPATPR*LVQLPF Trigger: GAATGGCAACTGGACCAGCCATCGTGGAGTGGCCGG...GACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| 3UTR CAA 72 bp | CATGTTAGAAGTGAAGCACAGACCCAATCCAGGGCATaGGAAGTCAGGGCAGGACAGATGCTCCCAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HVRSEAQTQSRA*EVRAGQMLPKG Trigger: GCCCTTTGGGAGCATCTGTCCTGCCCTGACTTCCAATGCCCTGGATTGGGTCTGTGCTTCACTTCTAACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR GCA 90 bp | TCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAATGTCACACTCTCCACTaGGGTGCCGGGAAACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGRTPLEGTKGYYGWSAECHTLH*GAGKLV Trigger: GACCAGTTTCCCGGCACCGCAGTGGAGAGTGTGACA...TTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CCA 90 bp | CAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTAGCCCAGGTCCAACTTaGGGCCTTCATCTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSGRTPLEGTKGYYGWSSPGPT*GLHLGS Trigger: AGAACCCAGATGAAGGCCCCAAGTTGGACCTGGGCT...ACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CCA 90 bp | GCAGGCTTAGATTGTGGCCAGAGTTCTGTGGCACCTCCTGAACCAGAAACAACTAGCCCAGGTCCAACTTaGGGCCTTCATCTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLDCGQSSVAPPEPETTSPGPT*GLHLGS Trigger: AGAACCCAGATGAAGGCCCCAAGTTGGACCTGGGCT...AGTTGTTTCTGGTTCAGGAGGTGCCACAGAACTCTGGCCACAATCTAAGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR TCA 90 bp | TCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAAGTCCAGTTGCCATTCTaGGGCCCTGTAACCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGRTPLEGTKGYYGWSAEVQLPF*GPVTTV Trigger: AACCGTGGTTACAGGGCCTCAGAATGGCAACTGGAC...TTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR GCA 90 bp | AATCCAGGGCATTGGAAGTCAGGGCAGGACAGATGCTCCCAAAGGGCTCCGTCTTTCGCAAACTCACACTaGTGCTTCACCCACTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NPGHWKSGQDRCSQRAPSFANSH*CFTHLK Trigger: TTTCAAGTGGGTGAAGCAGCAGTGTGAGTTTGCGAA...AGACGGAGCCCTTTGGGAGCATCTGTCCTGCCCTGACTTCCAATGCCCTGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTTCTTGGGGTACCAGCTaGTCCTTCCTTCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLSGRTPLEGTKGYYGWSSWGTS*SFLLPH Trigger: ATGAGGAAGAAGGAAGGAGCAGCTGGTACCCCAAGA...ACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| 3UTR CAA 72 bp | CCAACTGCAGAGGCAGAGCTGAACCCAGGCCACAAATaGAATCCATTCTGTGCTTTGGGGGCTGTGTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PTAEAELNPGHK*NPFCALGAVFN Trigger: ATTAAACACAGCCCCCAAAGCACAGAATGGATTCAATTTGTGGCCTGGGTTCAGCTCTGCCTCTGCAGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR GCA 90 bp | CAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTTTCGCAAACTCACACTaGTGCTTCACCCACTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLSGRTPLEGTKGYYGWSFANSH*CFTHLK Trigger: TTTCAAGTGGGTGAAGCAGCAGTGTGAGTTTGCGAA...ACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| 3UTR CAA 72 bp | CTGAACCCAGGCCACAAATTGAATCCATTCTGTGCTTaGGGGGCTGTGTTTAATAAGGATCTCTTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNPGHKLNPFCA*GAVFNKDLLVE Trigger: CTCCACCAAGAGATCCTTATTAAACACAGCCCCCAAAGCACAGAATGGATTCAATTTGTGGCCTGGGTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS CCA 90 bp | CCGGAGGAGGGGGCAGCAGGCTCAGCCCTCCTGCGCTGGTGGGCCTaGCTCTTGGGGTACCAGCTGCTCCTTCCTTCTTCCTCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PEEGAAGSALLRWWA*LLGYQLLLPSSSCL Trigger: CAAACATGAGGAAGAAGGAAGGAGCAGCTGGTACCCCAAGAGCCAGGCCCACCAGCGCAGGAGGGCTGAGCCTGCTGCCCCCTCCTCCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS CCA 90 bp | AGGGGGCAGCAGGCTCAGCCCTCCTGCGCTGGTGGGCCTGGCTCTTaGGGTACCAGCTGCTCCTTCCTTCTTCCTCATGTTTGCGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: RGQQAQPSCAGGPGS*GTSCSFLLPHVCDV Trigger: AACATCGCAAACATGAGGAAGAAGGAAGGAGCAGCTGGTACCCCAAGAGCCAGGCCCACCAGCGCAGGAGGGCTGAGCCTGCTGCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS GCA 90 bp | AATTCGGATGACGAAGTACCTGCTGGAGTCTGTCACACTCTCCACTaGGGTGCCGGGAAACTGGTCCACGGGGGCCTGTGCGAAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NSDDEVPAGVCHTLH*GAGKLVHGGLCEEL Trigger: GAGCTCTTCGCACAGGCCCCCGTGGACCAGTTTCCCGGCACCGCAGTGGAGAGTGTGACAGACTCCAGCAGGTACTTCGTCATCCGAATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCACGTGGACCTCCGGCTaGACACACAGAACAGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: SVSPQHCAAGFQVCRLPPTWTSG*THRTDS Trigger: CGAGTCTGTTCTGTGTGTCAAGCCGGAGGTCCACGT...GGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAAACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CAA 90 bp | CACCAGGGACCGTCAAGTGGGCCAGCTATGAGCCCAGAGGGAGCAGCAGCCAGGTGCTGCTTCACCCACTaGAAATGGTCCTGTAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: HQGPSSGPAMSPEGAAARCCFTH*KWSCNA Trigger: GGCATTACAGGACCATTTCAAGTGGGTGAAGCAGCA...CCTGGCTGCTGCTCCCTCTGGGCTCATAGCTGGCCCACTTGACGGTCCCTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGGCAGCGGCAGCAGGCTTAGATTGTGGCCAGAGTTCTGTGGCACCTCCATGGTCTGGCCGTCCTaGAAGCCCAGGTCCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGSGSRLRLWPEFCGTSMVWPS*KPRSNL Trigger: CAAGTTGGACCTGGGCTTCAAGGACGGCCAGACCAT...GGAGGTGCCACAGAACTCTGGCCACAATCTAAGCCTGCTGCCGCTGCCACTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR CAA 90 bp | CCCCACAGACAGCTGCTCTCCAGAGGGAGGGATGACAGTGGAACTCTTGCCCCCTGCTGCTTCACCCACTaGAAATGGTCCTGTAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHRQLLSRGRDDSGTLAPCCFTH*KWSCNA Trigger: GGCATTACAGGACCATTTCAAGTGGGTGAAGCAGCA...GGGGGCAAGAGTTCCACTGTCATCCCTCCCTCTGGAGAGCAGCTGTCTGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCCACAGCACTGTGCAGCTGGCTTCCAGGTATGCAGGCTGCCTCCCATGGCCTCATGTTTGCGATGTaGATCTTGATGGTCTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FPTALCSWLPGMQAASHGLMFAM*ILMVWP Trigger: CGGCCAGACCATCAAGATCAACATCGCAAACATGAG...GCCATGGGAGGCAGCCTGCATACCTGGAAGCCAGCTGCACAGTGCTGTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGATATCAGCAGTGGCAGCGGCAGCAGGCTTAGATTGTGGCCAGAGTTCTTCCTGACTGCGATGTaGATCTTGATGGTCTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPDISSGSGSRLRLWPEFFLTAM*ILMVWP Trigger: CGGCCAGACCATCAAGATCAACATCGCAGTCAGGAA...GAACTCTGGCCACAATCTAAGCCTGCTGCCGCTGCCACTGCTGATATCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGATATCAGCAGTGGCAGCGGCAGCAGGCTTAGATTGTGGCCAGAGTTCATCTGGGTTCTGCGCTaGTTTCGCAAACTCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SPDISSGSGSRLRLWPEFIWVLR*FRKLTL Trigger: CAGTGTGAGTTTGCGAAACAAGCGCAGAACCCAGAT...GAACTCTGGCCACAATCTAAGCCTGCTGCCGCTGCCACTGCTGATATCTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTCTCGGGAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTATGGTCTGGCCGTCCTaGAAGCCCAGGTCCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QLSGRTPLEGTKGYYGWSMVWPS*KPRSNL Trigger: CAAGTTGGACCTGGGCTTCAAGGACGGCCAGACCAT...ACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTCCCGAGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CAA 90 bp | AGAAGTGAAGCACAGACCCAATCCAGGGCATTGGAAGTCAGGGCAGGACAGATGTCCTGTAATGCCACGTaGAAGTCAAAGGCGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSEAQTQSRALEVRAGQMSCNAT*KSKASP Trigger: AGGGGACGCCTTTGACTTCAACGTGGCATTACAGGA...CATCTGTCCTGCCCTGACTTCCAATGCCCTGGATTGGGTCTGTGCTTCACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAAGGTCAAGCCCAGGTCCAACTaGGGGCCTTCATCTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGLLWKVPKAIMDGVQKVKPRSN*GPSSGF Trigger: GAACCCAGATGAAGGCCCCAAGTTGGACCTGGGCTT...GACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAAGCTGCTTACTCCCTTCCAGTGTCCCCCGACAGCCCATTCAAGCTACGGGGACCCTGTGGATTaGGTGAAGTCTCCCCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: FKKLLTPFQCPPTAHSSYGDPVD*VKSPQI Trigger: TATCTGGGGAGACTTCACCAAATCCACAGGGTCCCC...GTAGCTTGAATGGGCTGTCGGGGGACACTGGAAGGGAGTAAGCAGCTTTTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CAA 90 bp | AGAAGTGAAGCACAGACCCAATCCAGGGCATTGGAAGTCAGGGCAGGACAGATGACTGCGATGTTGATCTaGATGGTCTGGCCGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSEAQTQSRALEVRAGQMTAMLI*MVWPSL Trigger: CAAGGACGGCCAGACCATCAAGATCAACATCGCAGT...CATCTGTCCTGCCCTGACTTCCAATGCCCTGGATTGGGTCTGTGCTTCACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTCCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAAGGTCCCTCCTGTAATGCCACGTaGAAGTCAAAGGCGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTPLEGTKGYYGWSAEGPSCNAT*KSKASP Trigger: AGGGGACGCCTTTGACTTCAACGTGGCATTACAGGA...GGGACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGGAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGAAGGTACCAAAGGCTATTATGGATGGAGTGCAGAAGGTCCCTGTCCAATCTGGGTTCTGCGCTaGTTTCGCAAACTCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: PLEGTKGYYGWSAEGPCPIWVLR*FRKLTL Trigger: CAGTGTGAGTTTGCGAAACAAGCGCAGAACCCAGAT...TGGACAGGGACCTTCTGCACTCCATCCATAATAGCCTTTGGTACCTTCCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS-3UTR CAA 90 bp | TTCTTCCTCATGTTAGAAGTGAAGCACAGACCCAATCCAGGGCATTGGAAGTCAAAGCCCAGGTCCAACTaGGGGCCTTCATCTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFLMLEVKHRPNPGHWKSKPRSN*GPSSGF Trigger: GAACCCAGATGAAGGCCCCAAGTTGGACCTGGGCTT...TGACTTCCAATGCCCTGGATTGGGTCTGTGCTTCACTTCTAACATGAGGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153721.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAAGCTGCTTACTCCCTTCCAGTGTCCCCCGACAGCCCATTCAAGCTACTTTGCGATGTTGATCTaGATGGTCTGGCCGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FKKLLTPFQCPPTAHSSYFAMLI*MVWPSL Trigger: CAAGGACGGCCAGACCATCAAGATCAACATCGCAAA...GTAGCTTGAATGGGCTGTCGGGGGACACTGGAAGGGAGTAAGCAGCTTTTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS GCA 72 bp | CACTGCGGTGCCGGGAAACTGGTCCACGGGGGCCTGTaGGAAGAGCTCCCCAGAGGTCCTGTCCTCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HCGAGKLVHGGL*EELPRGPVLQL Trigger: AAGCTGGAGGACAGGACCTCTGGGGAGCTCTTCGCACAGGCCCCCGTGGACCAGTTTCCCGGCACCGCAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS CCA 72 bp | CCAGTTGCCATTCTGAGGCCCTGTAACCACGGTTGGTaGCCCGCGGCGGGATGCGGTAGACGTGGACCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PVAILRPCNHGW*PAAGCGRRGPP Trigger: CGGAGGTCCACGTCTACCGCATCCCGCCGCGGGCCACCAACCGTGGTTACAGGGCCTCAGAATGGCAACTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS CCA 72 bp | GGTCCAGTTGCCATTCTGAGGCCCTGTAACCACGGTTaGTGGCCCGCGGCGGGATGCGGTAGACGTGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: GPVAILRPCNHG*WPAAGCGRRGP Trigger: AGGTCCACGTCTACCGCATCCCGCCGCGGGCCACCAACCGTGGTTACAGGGCCTCAGAATGGCAACTGGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS GCA 72 bp | GACGAAGTACCTGCTGGAGTCTGTCACACTCTCCACTaGGGTGCCGGGAAACTGGTCCACGGGGGCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DEVPAGVCHTLH*GAGKLVHGGLC Trigger: GCACAGGCCCCCGTGGACCAGTTTCCCGGCACCGCAGTGGAGAGTGTGACAGACTCCAGCAGGTACTTCGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS CAA 90 bp | GAGGGGGCAGCAGGCTCAGCCCTCCTGCGCTGGTGGGCCTGGCTCTaGGGGTACCAGCTGCTCCTTCCTTCTTCCTCATGTTTGCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: EGAAGSALLRWWAWL*GYQLLLPSSSCLRC Trigger: ACATCGCAAACATGAGGAAGAAGGAAGGAGCAGCTGGTACCCCAAGAGCCAGGCCCACCAGCGCAGGAGGGCTGAGCCTGCTGCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS GCA 72 bp | AGTACCTGCTGGAGTCTGTCACACTCTCCACTGCGGTaGCGGGAAACTGGTCCACGGGGGCCTGTGCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: STCWSLSHSPLR*RETGPRGPVRR Trigger: TCTTCGCACAGGCCCCCGTGGACCAGTTTCCCGGCACCGCAGTGGAGAGTGTGACAGACTCCAGCAGGTACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030760.15 |
||
| CDS CAA 72 bp | CAGGTCCAACTTGGGGCCTTCATCTGGGTTCTGCGCTaGTTTCGCAAACTCACACTGCTGCTTCACCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: QVQLGAFIWVLR*FRKLTLLLHPL Trigger: AAGTGGGTGAAGCAGCAGTGTGAGTTTGCGAAACAAGCGCAGAACCCAGATGAAGGCCCCAAGTTGGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030760.15 ENSMUST00000153721.8 |
||
| CDS CAA 90 bp | CTTGAAGCCCAGGTCCAACTTGGGGCCTTCATCTGGGTTCTGCGCTaGTTTCGCAAACTCACACTGCTGCTTCACCCACTTGAAATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LEAQVQLGAFIWVLR*FRKLTLLLHPLEMV Trigger: GACCATTTCAAGTGGGTGAAGCAGCAGTGTGAGTTTGCGAAACAAGCGCAGAACCCAGATGAAGGCCCCAAGTTGGACCTGGGCTTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030760.15 ENSMUST00000153721.8 |
||
| CDS CAA 72 bp | TGCTTCACCCACTTGAAATGGTCCTGTAATGCCACGTaGAAGTCAAAGGCGTCCCCTCGGTCTCCAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CFTHLKWSCNAT*KSKASPRSPKP Trigger: TGGCTTTGGAGACCGAGGGGACGCCTTTGACTTCAACGTGGCATTACAGGACCATTTCAAGTGGGTGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030760.15 ENSMUST00000153721.8 |
||
| CDS CAA 90 bp | TCACACTGCTGCTTCACCCACTTGAAATGGTCCTGTAATGCCACGTaGAAGTCAAAGGCGTCCCCTCGGTCTCCAAAGCCAAGCCCAATA | + |
|
Preference number: 6 (lower is better) Translates to: SHCCFTHLKWSCNAT*KSKASPRSPKPSPI Trigger: TATTGGGCTTGGCTTTGGAGACCGAGGGGACGCCTTTGACTTCAACGTGGCATTACAGGACCATTTCAAGTGGGTGAAGCAGCAGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030760.15 ENSMUST00000153721.8 |
||