Pregenerated sensors for NECAB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027489Ensembl transcript IDs: ENSMUST00000000895.13, ENSMUST00000109716.9, ENSMUST00000125793.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGAGAATGGGTGGGATAAGACATGCAAATGATAGGCAAATGACATaGAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACT | + |
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Preference number: 1 (lower is better) Translates to: LRMGGIRHANDRQMT*KPTQDLPEVSGTTT Trigger: AGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCATTTGCCTATCATTTGCATGTCTTATCCCACCCATTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGTGACTACCAGCTTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTGGTGAGGGATCTGCCTaGGTCACACAGCAAGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: PQVTTSFIASVLKAQAGVGEGSA*VTQQGR Trigger: TCTACCTTGCTGTGTGACCCAGGCAGATCCCTCACC...AACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAAGCTGGTAGTCACCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAATCCGGGTTTCCTGAATCAGGCAGAAGCCCAGGTGCTTGGAAGCTACAACTAGCTCCTGATCCCTaGGCTGAGAGACCCTCTACC | + |
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Preference number: 2 (lower is better) Translates to: PESGFPESGRSPGAWKLQLAPDP*AERPST Trigger: GGTAGAGGGTCTCTCAGCCCAGGGATCAGGAGCTAG...TTGTAGCTTCCAAGCACCTGGGCTTCTGCCTGATTCAGGAAACCCGGATTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGGGAGAGGGGAGTCCCTaGGCATCAGTCCTGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PRIFQRSLVQPLMVEILGGEGSP*ASVLVL Trigger: CAGAACCAGGACTGATGCTCAGGGACTCCCCTCTCC...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATCTAGCTCCTGATCCCTaGGCTGAGAGACCCTCTACC | + |
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Preference number: 2 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDLAPDP*AERPST Trigger: GGTAGAGGGTCTCTCAGCCCAGGGATCAGGAGCTAG...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTGAGGGATCTGCCTaGGTCACACAGCAAGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDGEGSA*VTQQGR Trigger: TCTACCTTGCTGTGTGACCCAGGCAGATCCCTCACC...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATCCTGAGCATCAGTCCTaGTTCTGCCACTGGTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDPEHQS*FCHWLR Trigger: CCTCAACCAGTGGCAGAACCAGGACTGATGCTCAGG...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGTCCTGGTTCTGCCACTaGTTGAGGAAGAACAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PRIFQRSLVQPLMVEILGSWFCH*LRKNRN Trigger: GTTTCTGTTCTTCCTCAACCAGTGGCAGAACCAGGA...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CAA 90 bp | CCACAGGTGACTACCAGCTTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTTGGTTCTGCCACTGGTaGAGGAAGAACAGAAACTTA | + |
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Preference number: 3 (lower is better) Translates to: PQVTTSFIASVLKAQAGVWFCHW*RKNRNL Trigger: TAAGTTTCTGTTCTTCCTCAACCAGTGGCAGAACCA...AACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAAGCTGGTAGTCACCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CAA 90 bp | CTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAAATCAGAAGCCCAGGTGCTaGGAAGCTACAAACAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: LLGASLSTLRMGGIRHANQKPRC*EATNSK Trigger: TTTACTGTTTGTAGCTTCCAAGCACCTGGGCTTCTG...ATTTGCATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CAA 90 bp | AATGATAGGCAAATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTCAGAAGCCCAGGTGCTaGGAAGCTACAAACAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: NDRQMTCKPTQDLPEVSGQKPRC*EATNSK Trigger: TTTACTGTTTGTAGCTTCCAAGCACCTGGGCTTCTG...ACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCATTTGCCTATCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| 3UTR-3UTR CAA 90 bp | CTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAAATTGGTTCTGCCACTGGTaGAGGAAGAACAGAAACTTA | + |
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Preference number: 3 (lower is better) Translates to: LLGASLSTLRMGGIRHANWFCHW*RKNRNL Trigger: TAAGTTTCTGTTCTTCCTCAACCAGTGGCAGAACCA...ATTTGCATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | GGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGGTAACAGGCAGGCTGCTGGGGCGCAGGTaGCCCGAGCAGGCACACAGT | + |
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Preference number: 4 (lower is better) Translates to: GLRDPLPDDQAFSLVTGRLLGRR*PEQAHS Trigger: ACTGTGTGCCTGCTCGGGCCACCTGCGCCCCAGCAG...CCTGCCTGTTACCAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | GGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGGTAACAGGCAGGTCCAACCGCTGGCCATaGGCCTGCGCCTCCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLRDPLPDDQAFSLVTGRSNRWP*ACASRV Trigger: CACCCTGGAGGCGCAGGCCCATGGCCAGCGGTTGGA...CCTGCCTGTTACCAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | CCACAGGTGACTACCAGCTTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTCTGCTGGGGCGCAGGTaGCCCGAGCAGGCACACAGT | + |
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Preference number: 4 (lower is better) Translates to: PQVTTSFIASVLKAQAGVLLGRR*PEQAHS Trigger: ACTGTGTGCCTGCTCGGGCCACCTGCGCCCCAGCAG...AACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAAGCTGGTAGTCACCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | CCAGAATCCGGGTTTCCTGAATCAGGCAGAAGCCCAGGTGCTTGGAAGCTACAAGAGTGTCGCGGCTGCTaGGGCGCAGGTGGCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: PESGFPESGRSPGAWKLQECRGC*GAGGPS Trigger: GCTCGGGCCACCTGCGCCCCAGCAGCCGCGACACTC...TTGTAGCTTCCAAGCACCTGGGCTTCTGCCTGATTCAGGAAACCCGGATTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | CCACAGGTGACTACCAGCTTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTCGCTGGCCATGGGCCTaGGCCTCCAGGGTGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PQVTTSFIASVLKAQAGVRWPWA*ASRVSD Trigger: ATCAGACACCCTGGAGGCGCAGGCCCATGGCCAGCG...AACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAAGCTGGTAGTCACCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | GGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGGTAACAGGCAGGTCTTCATCCAACCGCTaGCCATGGGCCTGCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GLRDPLPDDQAFSLVTGRSSSNR*PWACAS Trigger: GGAGGCGCAGGCCCATGGCCAGCGGTTGGATGAAGA...CCTGCCTGTTACCAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR TCA 90 bp | GACCAGAATCCGGGTTTCCTGAATCAGGCAGAAGCCCAGGTGCTTGGAAGCTACGCTCCTGGAGGCGGTTaGCCTGTAGCCGCCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: DQNPGFLNQAEAQVLGSYAPGGG*PVAATA Trigger: AGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGC...GTAGCTTCCAAGCACCTGGGCTTCTGCCTGATTCAGGAAACCCGGATTCTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR TCA 90 bp | CTCCTGATCCCTGGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGGGAAGAACACAGTGGTaGGAGTGTCCGGGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LLIPGLRDPLPDDQAFSLGRTQW*ECPGPA Trigger: TGCAGGCCCCGGACACTCTCACCACTGTGTTCTTCC...CAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCCAGGGATCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | CCACAGGTGACTACCAGCTTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTGCTGGAAGGCCTTGCTaGAGGGTGACTGCTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PQVTTSFIASVLKAQAGVAGRPC*RVTAGA Trigger: GGCACCAGCAGTCACCCTGCAGCAAGGCCTTCCAGC...AACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAAGCTGGTAGTCACCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | GGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGGTAACAGGCAGGCTGCAGGGTGACTGCTaGTGCCTTCTCCAGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GLRDPLPDDQAFSLVTGRLQGDC*CLLQEA Trigger: AGCCTCCTGGAGAAGGCACCAGCAGTCACCCTGCAG...CCTGCCTGTTACCAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | TTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTCAGAGATCTCTTGATGGAGTCCTGCCCTCCGGCTaGCACAGGGCCTACTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: FIASVLKAQAGVQRSLDGVLPSG*HRAYSA Trigger: CGCAGAGTAGGCCCTGTGGCAGCCGGAGGGCAGGAC...TCCATCAAGAGATCTCTGAACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGGAGTGTCGCGGCTGCTaGGGCGCAGGTGGCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: PRIFQRSLVQPLMVEILGECRGC*GAGGPS Trigger: GCTCGGGCCACCTGCGCCCCAGCAGCCGCGACACTC...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR TCA 90 bp | CCAGAATCCGGGTTTCCTGAATCAGGCAGAAGCCCAGGTGCTTGGAAGCTACAAGGCCTTGCTGCAGGGTaGCTGCTGGTGCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PESGFPESGRSPGAWKLQGLAAG*LLVPSP Trigger: TGGAGAAGGCACCAGCAGTCACCCTGCAGCAAGGCC...TTGTAGCTTCCAAGCACCTGGGCTTCTGCCTGATTCAGGAAACCCGGATTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | TTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTCAGAGATCTCTTGATGGATGCTCCTTAGGGCTCTaGGTCCTGCCCTCCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FIASVLKAQAGVQRSLDGCSLGL*VLPSGC Trigger: GCAGCCGGAGGGCAGGACGCAGAGCCCTAAGGAGCA...TCCATCAAGAGATCTCTGAACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | CCACAGGTGACTACCAGCTTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTCTGCAGGGCATCCTCTaGCACCTGCACTTGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PQVTTSFIASVLKAQAGVLQGIL*HLHLPL Trigger: AAGAGGCAAGTGCAGGTGGCAGAGGATGCCCTGCAG...AACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAAGCTGGTAGTCACCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109716.9 |
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| CDS-3UTR TCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGCTCCTGGAGGCGGTTaGCCTGTAGCCGCCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDAPGGG*PVAATA Trigger: AGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGC...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGGTCCTGCCCTCCGGCTaGCACAGGGCCTACTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: PRIFQRSLVQPLMVEILGVLPSG*HRAYSA Trigger: CGCAGAGTAGGCCCTGTGGCAGCCGGAGGGCAGGAC...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | GGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGGTAACAGGCAGGTTCTGGGCAGACACATaGAGACAATGGCTTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLRDPLPDDQAFSLVTGRFWADT*RQWLWA Trigger: GGCCCAAAGCCATTGTCTGCATGTGTCTGCCCAGAA...CCTGCCTGTTACCAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | GCATCAGTCCTGGTTCTGCCACTGGTTGAGGAAGAACAGAAACTTAACCCCAAATCCAACCGCTGGCCATaGGCCTGCGCCTCCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ASVLVLPLVEEEQKLNPKSNRWP*ACASRV Trigger: CACCCTGGAGGCGCAGGCCCATGGCCAGCGGTTGGA...TTTGGGGTTAAGTTTCTGTTCTTCCTCAACCAGTGGCAGAACCAGGACTGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | CTCCTGATCCCTGGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGAATCCACCAGGAGGCTaGGAAGAACACAGTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLIPGLRDPLPDDQAFSLNPPGG*EEHSGE Trigger: CTCACCACTGTGTTCTTCCCAGCCTCCTGGTGGATT...CAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCCAGGGATCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR TCA 90 bp | CAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGGCCTTGCTGCAGGGTaGCTGCTGGTGCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QGLLGASLSTLRMGGIRHGLAAG*LLVPSP Trigger: TGGAGAAGGCACCAGCAGTCACCCTGCAGCAAGGCC...ATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR TCA 90 bp | CTGCAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGAGGAAGAACACAGTGGTaGGAGTGTCCGGGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LQGLLGASLSTLRMGGIRGRTQW*ECPGPA Trigger: TGCAGGCCCCGGACACTCTCACCACTGTGTTCTTCC...TCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | AATGATAGGCAAATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTCGCTGGCCATGGGCCTaGGCCTCCAGGGTGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: NDRQMTCKPTQDLPEVSGRWPWA*ASRVSD Trigger: ATCAGACACCCTGGAGGCGCAGGCCCATGGCCAGCG...ACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCATTTGCCTATCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | CTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAAATTGCTCCTTAGGGCTCTaGGTCCTGCCCTCCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLGASLSTLRMGGIRHANCSLGL*VLPSGC Trigger: GCAGCCGGAGGGCAGGACGCAGAGCCCTAAGGAGCA...ATTTGCATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | CTGCAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGAGCATCCTCTGCCACCTaGACTTGCCTCTGCGCCACA | + |
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Preference number: 4 (lower is better) Translates to: LQGLLGASLSTLRMGGIRASSAT*TCLCAT Trigger: TGTGGCGCAGAGGCAAGTGCAGGTGGCAGAGGATGC...TCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
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| CDS-3UTR GCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGCTGGAAGGCCTTGCTaGAGGGTGACTGCTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDAGRPC*RVTAGA Trigger: GGCACCAGCAGTCACCCTGCAGCAAGGCCTTCCAGC...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | GACCAGAATCCGGGTTTCCTGAATCAGGCAGAAGCCCAGGTGCTTGGAAGCTACGCATCCTCTGCCACCTaGACTTGCCTCTTGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: DQNPGFLNQAEAQVLGSYASSAT*TCLLHS Trigger: TGAGTGCAAGAGGCAAGTGCAGGTGGCAGAGGATGC...GTAGCTTCCAAGCACCTGGGCTTCTGCCTGATTCAGGAAACCCGGATTCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | CCACAGGTGACTACCAGCTTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTAATCCACCAGGAGGCTaGGAAGAACACAGTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PQVTTSFIASVLKAQAGVNPPGG*EEHSGE Trigger: CTCACCACTGTGTTCTTCCCAGCCTCCTGGTGGATT...AACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAAGCTGGTAGTCACCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR TCA 90 bp | CTGCAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGATGCAGGGCTTGTAGCTaGTTGACAGTCTCCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LQGLLGASLSTLRMGGIRCRACS*LTVSRS Trigger: GCTGCGGGAGACTGTCAATCAGCTACAAGCCCTGCA...TCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR TCA 90 bp | GCATCAGTCCTGGTTCTGCCACTGGTTGAGGAAGAACAGAAACTTAACCCCAAACCTGCAGGTGATCGATaGGGGTGCGCTGGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ASVLVLPLVEEEQKLNPKPAGDR*GCAGRP Trigger: AGGCCTTCCAGCGCACCCTCATCGATCACCTGCAGG...TTTGGGGTTAAGTTTCTGTTCTTCCTCAACCAGTGGCAGAACCAGGACTGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR TCA 90 bp | AATGATAGGCAAATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTCCTGCAGGTGATCGATaGGGGTGCGCTGGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NDRQMTCKPTQDLPEVSGPAGDR*GCAGRP Trigger: AGGCCTTCCAGCGCACCCTCATCGATCACCTGCAGG...ACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCATTTGCCTATCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR GCA 90 bp | CAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATTGTAGCCGCCACTGCTaGTCAGCCTCTGAACTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLLGASLSTLRMGGIRHCSRHC*SASELR Trigger: GCGGAGTTCAGAGGCTGAGCAGCAGTGGCGGCTACA...ATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTCAGAGATCTCTTGATGGACAGGGTGACTGCTGGTaGCTTCTCCAGGAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FIASVLKAQAGVQRSLDGQGDCW*LLQEAS Trigger: TGAAGCCTCCTGGAGAAGGCACCAGCAGTCACCCTG...TCCATCAAGAGATCTCTGAACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATCTGCAGGGTGACTGCTaGTGCCTTCTCCAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGLLGASLSTLRMGGIRHLQGDC*CLLQEA Trigger: AGCCTCCTGGAGAAGGCACCAGCAGTCACCCTGCAG...ATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATTCGATGAGGGTGCGCTaGAAGGCCTTGCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDSMRVR*KALLQG Trigger: ACCCTGCAGCAAGGCCTTCCAGCGCACCCTCATCGA...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR TCA 90 bp | CTCCTGATCCCTGGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGTCTCTAAATTGTCAGTaGGATGATCATCGATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLIPGLRDPLPDDQAFSLSLNCQ*DDHRCR Trigger: GCGGCATCGATGATCATCTCACTGACAATTTAGAGA...CAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCCAGGGATCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR GCA 90 bp | GCATCAGTCCTGGTTCTGCCACTGGTTGAGGAAGAACAGAAACTTAACCCCAAATGTAGCCGCCACTGCTaGTCAGCCTCTGAACTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASVLVLPLVEEEQKLNPKCSRHC*SASELR Trigger: GCGGAGTTCAGAGGCTGAGCAGCAGTGGCGGCTACA...TTTGGGGTTAAGTTTCTGTTCTTCCTCAACCAGTGGCAGAACCAGGACTGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATCAGGGTGACTGCTGGTaGCTTCTCCAGGAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGLLGASLSTLRMGGIRHQGDCW*LLQEAS Trigger: TGAAGCCTCCTGGAGAAGGCACCAGCAGTCACCCTG...ATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR GCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATTTGCTGCAGGGTGACTaGTGGTGCCTTCTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDLLQGD*WCLLQE Trigger: CTCCTGGAGAAGGCACCAGCAGTCACCCTGCAGCAA...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CCA 90 bp | CTGCAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGATGGTCTATGAGCTCCTaGAGGCGGTTGACCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQGLLGASLSTLRMGGIRWSMSS*RRLTCS Trigger: GCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCA...TCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTCAGAGATCTCTTGATGGAGCCTTGCACTCAAGCTaGTCTATGAGCTCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIASVLKAQAGVQRSLDGALHSS*SMSSWR Trigger: CCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGGC...TCCATCAAGAGATCTCTGAACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
||
| CDS-3UTR CCA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGTCGATGAGGGTGCGCTaGAAGGCCTTGCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRIFQRSLVQPLMVEILGSMRVR*KALLQG Trigger: ACCCTGCAGCAAGGCCTTCCAGCGCACCCTCATCGA...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR TCA 90 bp | GCATCAGTCCTGGTTCTGCCACTGGTTGAGGAAGAACAGAAACTTAACCCCAAATGCAGGGCTTGTAGCTaGTTGACAGTCTCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASVLVLPLVEEEQKLNPKCRACS*LTVSRS Trigger: GCTGCGGGAGACTGTCAATCAGCTACAAGCCCTGCA...TTTGGGGTTAAGTTTCTGTTCTTCCTCAACCAGTGGCAGAACCAGGACTGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGACCTGCACTTGCCTCTaGGCCACAAGGATGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRIFQRSLVQPLMVEILGTCTCL*ATRMCE Trigger: CTCGCACATCCTTGTGGCGCAGAGGCAAGTGCAGGT...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAAATTTGCTGCAGGGTGACTaGTGGTGCCTTCTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGASLSTLRMGGIRHANLLQGD*WCLLQE Trigger: CTCCTGGAGAAGGCACCAGCAGTCACCCTGCAGCAA...ATTTGCATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAGCAGAAATCGTGTaGCAAACTGGTCCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLLGASLSTLRMGGIRHAAEIV*QTGPPW Trigger: CCAAGGTGGACCAGTTTGTCACACGATTTCTGCTGC...ATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR TCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGCAGCAGAAATCGTGTaGCAAACTGGTCCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDAAEIV*QTGPPW Trigger: CCAAGGTGGACCAGTTTGTCACACGATTTCTGCTGC...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGGGGCTTGTAGCTGATTaGCAGTCTCCCGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRIFQRSLVQPLMVEILGGLVAD*QSPAAE Trigger: TTCTGCTGCGGGAGACTGTCAATCAGCTACAAGCCC...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGGTAACAGGCAGGATCATCATTTTTGTCTaGTCTTCGGAAAACGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLRDPLPDDQAFSLVTGRIIIFV*SSENVL Trigger: CAGGACGTTTTCCGAAGAGCAGACAAAAATGATGAT...CCTGCCTGTTACCAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAAATTGCGCCACAAGGATGTaGGAGTCAAACCCCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGASLSTLRMGGIRHANCATRM*ESNPLV Trigger: CACCAAGGGGTTTGACTCGCACATCCTTGTGGCGCA...ATTTGCATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
||
| CDS-3UTR GCA 90 bp | CAAGGTCTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATTTCTGGGCAGACACATaGAGACAATGGCTTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGLLGASLSTLRMGGIRHFWADT*RQWLWA Trigger: GGCCCAAAGCCATTGTCTGCATGTGTCTGCCCAGAA...ATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAGACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAAATTGGTCTATGAGCTCCTaGAGGCGGTTGACCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGASLSTLRMGGIRHANWSMSS*RRLTCS Trigger: GCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCA...ATTTGCATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGGACACATGCAGACAATaGCTTTGGGCCCCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRIFQRSLVQPLMVEILGDTCRQ*LWAPVK Trigger: CTTCACAGGGGCCCAAAGCCATTGTCTGCATGTGTC...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAAATCTCTTGCACTCAAGCTaGTCTATGAGCTCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGASLSTLRMGGIRHANLLHSS*SMSSWR Trigger: CCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGAG...ATTTGCATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109716.9 |
||
| CDS-3UTR GCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATCCACAGGGCCTACTCTaGGCTTTGATAGTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDPQGLL*ALIVSS Trigger: TGAAGAAACTATCAAAGCGCAGAGTAGGCCCTGTGG...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATAGACACCCAGGTGTGTaGAGAAGTAGTCACACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDRHPGV*RSSHTV Trigger: AACTGTGTGACTACTTCTCCACACACCTGGGTGTCT...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR TCA 90 bp | GCATCAGTCCTGGTTCTGCCACTGGTTGAGGAAGAACAGAAACTTAACCCCAAATCTCTAAATTGTCAGTaGGATGATCATCGATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASVLVLPLVEEEQKLNPKSLNCQ*DDHRCR Trigger: GCGGCATCGATGATCATCTCACTGACAATTTAGAGA...TTTGGGGTTAAGTTTCTGTTCTTCCTCAACCAGTGGCAGAACCAGGACTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CCA 90 bp | GCATCAGTCCTGGTTCTGCCACTGGTTGAGGAAGAACAGAAACTTAACCCCAAATTGTCTAGCATCTTCTaGGCAGACACATGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ASVLVLPLVEEEQKLNPKLSSIF*ADTCRQ Trigger: TTGTCTGCATGTGTCTGCCCAGAAGATGCTAGACAA...TTTGGGGTTAAGTTTCTGTTCTTCCTCAACCAGTGGCAGAACCAGGACTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CCA 90 bp | AATGATAGGCAAATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTTTGTCTAGCATCTTCTaGGCAGACACATGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: NDRQMTCKPTQDLPEVSGLSSIF*ADTCRQ Trigger: TTGTCTGCATGTGTCTGCCCAGAAGATGCTAGACAA...ACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCATTTGCCTATCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAAATATCATCATTTTTGTCTaGTCTTCGGAAAACGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGASLSTLRMGGIRHANIIIFV*SSENVL Trigger: CAGGACGTTTTCCGAAGAGCAGACAAAAATGATGAT...ATTTGCATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS GCA 90 bp | TCCTGGAAAAGCGCGTGTCCCGCGGCAGGCGCAGAGTGTCGCGGCTaGTGGGGCGCAGGTGGCCCGAGCAGGCACACAGTAAGCAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SWKSACPAAGAECRG*WGAGGPSRHTVSSP Trigger: CGGGCTGCTTACTGTGTGCCTGCTCGGGCCACCTGCGCCCCAGCAGCCGCGACACTCTGCGCCTGCCGCGGGACACGCGCTTTTCCAGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 ENSMUST00000125793.2 |
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| CDS TCA 90 bp | GAGGCTGGGAAGAACACAGTGGTGAGAGTGTCCGGGGCCTGCAGGTaGTCGATGAGGGTGCGCTGGAAGGCCTTGCTGCAGGGTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAGKNTVVRVSGACR*SMRVRWKALLQGDC Trigger: GCAGTCACCCTGCAGCAAGGCCTTCCAGCGCACCCTCATCGATCACCTGCAGGCCCCGGACACTCTCACCACTGTGTTCTTCCCAGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS CCA 90 bp | GGTTCCAGCCGGGGTGCCTTGCACTCAAGCTGGTCTATGAGCTCCTaGAGGCGGTTGACCTGTAGCCGCCACTGCTGCTCAGCCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSSRGALHSSWSMSS*RRLTCSRHCCSASE Trigger: TTCAGAGGCTGAGCAGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGGCACCCCGGCTGGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
||
| CDS CCA 90 bp | TCCTCCTCATGTGTGGGTTCCAGCCGGGGTGCCTTGCACTCAAGCTaGTCTATGAGCTCCTGGAGGCGGTTGACCTGTAGCCGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSCVGSSRGALHSS*SMSSWRRLTCSRHC Trigger: GCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGGCACCCCGGCTGGAACCCACACATGAGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
||
| CDS TCA 90 bp | GCACTTGCCTCTGCGCCACAAGGATGTGCGAGTCAAACCCCTTGGTaGGGTCCTCCTCATGTGTGGGTTCCAGCCGGGGTGCCTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ALASAPQGCASQTPW*GPPHVWVPAGVPCT Trigger: AGTGCAAGGCACCCCGGCTGGAACCCACACATGAGGAGGACCTCACCAAGGGGTTTGACTCGCACATCCTTGTGGCGCAGAGGCAAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
||
| CDS GCA 90 bp | CTCTGCGCTTTGATAGTTTCTTCATCCAACCGCTGGCCATGGGCCTaGGCCTCCAGGGTGTCTGATGCTCCCTCCAGGGAGGTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCALIVSSSNRWPWA*ASRVSDAPSREVCR Trigger: CCTGCAGACCTCCCTGGAGGGAGCATCAGACACCCTGGAGGCGCAGGCCCATGGCCAGCGGTTGGATGAAGAAACTATCAAAGCGCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 ENSMUST00000125793.2 |
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| CDS CCA 90 bp | GGCCTACTCTGCGCTTTGATAGTTTCTTCATCCAACCGCTGGCCATaGGCCTGCGCCTCCAGGGTGTCTGATGCTCCCTCCAGGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLLCALIVSSSNRWP*ACASRVSDAPSREV Trigger: GACCTCCCTGGAGGGAGCATCAGACACCCTGGAGGCGCAGGCCCATGGCCAGCGGTTGGATGAAGAAACTATCAAAGCGCAGAGTAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 ENSMUST00000125793.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGGTGACTACCAGCTTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTAGCTCCTGGAGGCGGTaGACCTGTAGCCGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQVTTSFIASVLKAQAGVSSWRR*TCSRHC Trigger: GCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCT...AACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAAGCTGGTAGTCACCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CAA 90 bp | CCACAGGTGACTACCAGCTTTATTGCCTCTGTGCTCAAGGCCCAGGCTGGGGTTGTGCGCTGGAAGGCCTaGCTGCAGGGTGACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQVTTSFIASVLKAQAGVVRWKA*LQGDCW Trigger: CCAGCAGTCACCCTGCAGCAAGGCCTTCCAGCGCAC...AACCCCAGCCTGGGCCTTGAGCACAGAGGCAATAAAGCTGGTAGTCACCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS GCA 90 bp | TGGTCTATGAGCTCCTGGAGGCGGTTGACCTGTAGCCGCCACTGCTaGTCAGCCTCTGAACTCCGCCCTGTATCAGAGGATCCAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WSMSSWRRLTCSRHC*SASELRPVSEDPGD Trigger: GTCTCCTGGATCCTCTGATACAGGGCGGAGTTCAGAGGCTGAGCAGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS GCA 90 bp | AGCTGGTCTATGAGCTCCTGGAGGCGGTTGACCTGTAGCCGCCACTaGTGCTCAGCCTCTGAACTCCGCCCTGTATCAGAGGATCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SWSMSSWRRLTCSRH*CSASELRPVSEDPG Trigger: TCCTGGATCCTCTGATACAGGGCGGAGTTCAGAGGCTGAGCAGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS CCA 90 bp | GCCACCTGCACTTGCCTCTTGCACTCAAGCTGGTCTATGAGCTCCTaGAGGCGGTTGACCTGTAGCCGCCACTGCTGCTCAGCCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ATCTCLLHSSWSMSS*RRLTCSRHCCSASE Trigger: TTCAGAGGCTGAGCAGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGAGGCAAGTGCAGGTGGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109716.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTGATCCCTGGGCTGAGAGACCCTCTACCAGATGACCAGGCCTTTAGCCTGACAAACTGGTCCACCTaGGAGGCCTGTTCATACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLIPGLRDPLPDDQAFSLTNWST*EACSYS Trigger: GGAGTATGAACAGGCCTCCAAGGTGGACCAGTTTGT...CAGGCTAAAGGCCTGGTCATCTGGTAGAGGGTCTCTCAGCCCAGGGATCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS CCA 90 bp | GAGACTCCAGCGCAGCCAGCACGGGCCGGTAGACACCCAGGTGTGTaGAGAAGTAGTCACACAGTTTCTCTGTCTCTAAATTGCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ETPAQPARAGRHPGV*RSSHTVSLSLNCTH Trigger: GTGAGTGCAATTTAGAGACAGAGAAACTGTGTGACTACTTCTCCACACACCTGGGTGTCTACCGGCCCGTGCTGGCTGCGCTGGAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125793.2 |
||
| CDS-3UTR CAA 90 bp | AATGATAGGCAAATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTAGCTCCTGGAGGCGGTaGACCTGTAGCCGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NDRQMTCKPTQDLPEVSGSSWRR*TCSRHC Trigger: GCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCT...ACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCATTTGCCTATCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
||
| CDS-3UTR CAA 90 bp | CTTCTTGGGGCTTCCCTTAGTACCCTGAGAATGGGTGGGATAAGACATGCAAATGTGCGCTGGAAGGCCTaGCTGCAGGGTGACTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLGASLSTLRMGGIRHANVRWKA*LQGDCW Trigger: CCAGCAGTCACCCTGCAGCAAGGCCTTCCAGCGCAC...ATTTGCATGTCTTATCCCACCCATTCTCAGGGTACTAAGGGAAGCCCCAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS GCA 90 bp | TTGCTGCAGGGTGACTGCTGGTGCCTTCTCCAGGAGGCTTCATCCTaGCAGAACTCATACAGGGTGAAAGCAGCATTGTCTAGCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: LLQGDCWCLLQEASS*QNSYRVKAALSSIF Trigger: GAAGATGCTAGACAATGCTGCTTTCACCCTGTATGAGTTCTGGCAGGATGAAGCCTCCTGGAGAAGGCACCAGCAGTCACCCTGCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CAA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGCTCTGCCACCTGCACTaGCCTCTGCGCCACAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: PRIFQRSLVQPLMVEILGLCHLH*PLRHKD Trigger: ATCCTTGTGGCGCAGAGGCAAGTGCAGGTGGCAGAG...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
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| CDS TCA 90 bp | GCATCTTCTGGGCAGACACATGCAGACAATGGCTTTGGGCCCCTGTaGAGTTCATGTAGCAGCACAAAGCACGATGAAAATCCTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: ASSGQTHADNGFGPL*SSCSSTKHDENPAG Trigger: CCCTGCAGGATTTTCATCGTGCTTTGTGCTGCTACATGAACTTCACAGGGGCCCAAAGCCATTGTCTGCATGTGTCTGCCCAGAAGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CAA 90 bp | GCATCAGTCCTGGTTCTGCCACTGGTTGAGGAAGAACAGAAACTTAACCCCAAAACAAACTGGTCCACCTaGGAGGCCTGTTCATACTCC | + |
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Preference number: 5 (lower is better) Translates to: ASVLVLPLVEEEQKLNPKTNWST*EACSYS Trigger: GGAGTATGAACAGGCCTCCAAGGTGGACCAGTTTGT...TTTGGGGTTAAGTTTCTGTTCTTCCTCAACCAGTGGCAGAACCAGGACTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CAA 90 bp | ATGACATGCAAACCGACCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATAGGGTGAAAGCAGCATaGTCTAGCATCTTCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: MTCKPTQDLPEVSGTTTDRVKAA*SSIFWA Trigger: TGCCCAGAAGATGCTAGACAATGCTGCTTTCACCCT...ATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGGTCGGTTTGCATGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS-3UTR CAA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGACCTGCACTTGCCTCTaGCACTCAAGCTGGTCTATG | + |
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Preference number: 5 (lower is better) Translates to: PRIFQRSLVQPLMVEILGTCTCL*HSSWSM Trigger: CATAGACCAGCTTGAGTGCAAGAGGCAAGTGCAGGT...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109716.9 |
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| CDS-3UTR CAA 90 bp | CCCAGGATCTTCCAGAGGTCTCTGGTACAACCACTGATGGTAGAAATTTTAGGGAGGGTGAAAGCAGCATaGTCTAGCATCTTCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: PRIFQRSLVQPLMVEILGRVKAA*SSIFWA Trigger: TGCCCAGAAGATGCTAGACAATGCTGCTTTCACCCT...CCCTAAAATTTCTACCATCAGTGGTTGTACCAGAGACCTCTGGAAGATCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS GCA 90 bp | CCAGGTGTGTGGAGAAGTAGTCACACAGTTTCTCTGTCTCTAAATTaGACTCACCATTTTTGTCTGCTCTTCGGAAAACGTCCTGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: PGVWRSSHTVSLSLN*THHFCLLFGKRPGK Trigger: TTTTCCAGGACGTTTTCCGAAGAGCAGACAAAAATGGTGAGTGCAATTTAGAGACAGAGAAACTGTGTGACTACTTCTCCACACACCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125793.2 |
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| CDS CCA 72 bp | GGCAGGCGCAGAGTGTCGCGGCTGCTGGGGCGCAGGTaGCCCGAGCAGGCACACAGTAAGCAGCCCGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: GRRRVSRLLGRR*PEQAHSKQPGA Trigger: TGCGCCGGGCTGCTTACTGTGTGCCTGCTCGGGCCACCTGCGCCCCAGCAGCCGCGACACTCTGCGCCTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 ENSMUST00000125793.2 |
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| CDS CCA 72 bp | CGGGGTGCCTTGCACTCAAGCTGGTCTATGAGCTCCTaGAGGCGGTTGACCTGTAGCCGCCACTGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RGALHSSWSMSS*RRLTCSRHCCS Trigger: TGAGCAGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGGCACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
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| CDS CAA 72 bp | CCTGCCCTCCGGCTGCCACAGGGCCTACTCTGCGCTTaGATAGTTTCTTCATCCAACCGCTGGCCATGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PALRLPQGLLCA*IVSSSNRWPWA Trigger: GGCCCATGGCCAGCGGTTGGATGAAGAAACTATCAAAGCGCAGAGTAGGCCCTGTGGCAGCCGGAGGGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 ENSMUST00000125793.2 |
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| CDS CAA 90 bp | ACCTGCACTTGCCTCTGCGCCACAAGGATGTGCGAGTCAAACCCCTaGGTGAGGTCCTCCTCATGTGTGGGTTCCAGCCGGGGTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: TCTCLCATRMCESNP*VRSSSCVGSSRGAL Trigger: CAAGGCACCCCGGCTGGAACCCACACATGAGGAGGACCTCACCAAGGGGTTTGACTCGCACATCCTTGTGGCGCAGAGGCAAGTGCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
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| CDS TCA 72 bp | TCTGCGCCACAAGGATGTGCGAGTCAAACCCCTTGGTaGGGTCCTCCTCATGTGTGGGTTCCAGCCGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SAPQGCASQTPW*GPPHVWVPAGV Trigger: CACCCCGGCTGGAACCCACACATGAGGAGGACCTCACCAAGGGGTTTGACTCGCACATCCTTGTGGCGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
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| CDS TCA 72 bp | ATCGATGAGGGTGCGCTGGAAGGCCTTGCTGCAGGGTaGCTGCTGGTGCCTTCTCCAGGAGGCTTCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: IDEGALEGLAAG*LLVPSPGGFIL Trigger: CAGGATGAAGCCTCCTGGAGAAGGCACCAGCAGTCACCCTGCAGCAAGGCCTTCCAGCGCACCCTCATCGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS TCA 72 bp | AAGAACACAGTGGTGAGAGTGTCCGGGGCCTGCAGGTaGTCGATGAGGGTGCGCTGGAAGGCCTTGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: KNTVVRVSGACR*SMRVRWKALLQ Trigger: CTGCAGCAAGGCCTTCCAGCGCACCCTCATCGATCACCTGCAGGCCCCGGACACTCTCACCACTGTGTTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS GCA 72 bp | AGCTCCTGGAGGCGGTTGACCTGTAGCCGCCACTGCTaGTCAGCCTCTGAACTCCGCCCTGTATCAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SSWRRLTCSRHC*SASELRPVSED Trigger: ATCCTCTGATACAGGGCGGAGTTCAGAGGCTGAGCAGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS GCA 72 bp | ATGAGCTCCTGGAGGCGGTTGACCTGTAGCCGCCACTaGTGCTCAGCCTCTGAACTCCGCCCTGTATCAGAG | + |
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Preference number: 6 (lower is better) Translates to: MSSWRRLTCSRH*CSASELRPVSE Trigger: CTCTGATACAGGGCGGAGTTCAGAGGCTGAGCAGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS CCA 72 bp | TGTGTGGGTTCCAGCCGGGGTGCCTTGCACTCAAGCTaGTCTATGAGCTCCTGGAGGCGGTTGACCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: CVGSSRGALHSS*SMSSWRRLTCS Trigger: GCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGGCACCCCGGCTGGAACCCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
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| CDS CAA 72 bp | TGCCTCTGCGCCACAAGGATGTGCGAGTCAAACCCCTaGGTGAGGTCCTCCTCATGTGTGGGTTCCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: CLCATRMCESNP*VRSSSCVGSSR Trigger: CCGGCTGGAACCCACACATGAGGAGGACCTCACCAAGGGGTTTGACTCGCACATCCTTGTGGCGCAGAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
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| CDS TCA 72 bp | TATCAGAGGATCCAGGAGACCAGGATGGTGACCAACTaGTGCTCCTTAGGGCTCTGCGTCCTGCCCTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: YQRIQETRMVTN*CSLGLCVLPSG Trigger: GCCGGAGGGCAGGACGCAGAGCCCTAAGGAGCATCAGTTGGTCACCATCCTGGTCTCCTGGATCCTCTGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS GCA 72 bp | TCTGCCACCTGCACTTGCCTCTGCGCCACAAGGATGTaGGAGTCAAACCCCTTGGTGAGGTCCTCCTCATGT | + |
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Preference number: 6 (lower is better) Translates to: SATCTCLCATRM*ESNPLVRSSSC Trigger: ACATGAGGAGGACCTCACCAAGGGGTTTGACTCGCACATCCTTGTGGCGCAGAGGCAAGTGCAGGTGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
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| CDS CCA 72 bp | ACTTGCCTCTTGCACTCAAGCTGGTCTATGAGCTCCTaGAGGCGGTTGACCTGTAGCCGCCACTGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TCLLHSSWSMSS*RRLTCSRHCCS Trigger: TGAGCAGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGAGGCAAGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109716.9 |
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| CDS CCA 72 bp | TCCTCTGCCACCTGCACTTGCCTCTTGCACTCAAGCTaGTCTATGAGCTCCTGGAGGCGGTTGACCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SSATCTCLLHSS*SMSSWRRLTCS Trigger: GCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGAGGCAAGTGCAGGTGGCAGAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109716.9 |
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| CDS GCA 72 bp | GCACAAAGCACGATGAAAATCCTGCAGGGCATCCTCTaGCACCTGCACTTGCCTCTGCGCCACAAGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: AQSTMKILQGIL*HLHLPLRHKDV Trigger: CACATCCTTGTGGCGCAGAGGCAAGTGCAGGTGGCAGAGGATGCCCTGCAGGATTTTCATCGTGCTTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000895.13 |
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| CDS CCA 72 bp | CTACTCTGCGCTTTGATAGTTTCTTCATCCAACCGCTaGCCATGGGCCTGCGCCTCCAGGGTGTCTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: LLCALIVSSSNR*PWACASRVSDA Trigger: AGCATCAGACACCCTGGAGGCGCAGGCCCATGGCCAGCGGTTGGATGAAGAAACTATCAAAGCGCAGAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 ENSMUST00000125793.2 |
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| CDS CAA 72 bp | TCCCGCAGCAGAAATCGTGTGACAAACTGGTCCACCTaGGAGGCCTGTTCATACTCCAGCTTTGTAGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRSRNRVTNWST*EACSYSSFVVS Trigger: GGACACTACAAAGCTGGAGTATGAACAGGCCTCCAAGGTGGACCAGTTTGTCACACGATTTCTGCTGCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 ENSMUST00000125793.2 |
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| CDS CAA 90 bp | CAGGAGGCTTCATCCTGCCAGAACTCATACAGGGTGAAAGCAGCATaGTCTAGCATCTTCTGGGCAGACACATGCAGACAATGGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: QEASSCQNSYRVKAA*SSIFWADTCRQWLW Trigger: CCAAAGCCATTGTCTGCATGTGTCTGCCCAGAAGATGCTAGACAATGCTGCTTTCACCCTGTATGAGTTCTGGCAGGATGAAGCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS TCA 72 bp | TCCAGGAGGCTTCATCCTGCCAGAACTCATACAGGGTaGAAGCAGCATTGTCTAGCATCTTCTGGGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: SRRLHPARTHTG*KQHCLASSGQT Trigger: TGTCTGCCCAGAAGATGCTAGACAATGCTGCTTTCACCCTGTATGAGTTCTGGCAGGATGAAGCCTCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS CCA 72 bp | TTGACAGTCTCCCGCAGCAGAAATCGTGTGACAAACTaGTCCACCTTGGAGGCCTGTTCATACTCCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LTVSRSRNRVTN*STLEACSYSSF Trigger: AAAGCTGGAGTATGAACAGGCCTCCAAGGTGGACCAGTTTGTCACACGATTTCTGCTGCGGGAGACTGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 ENSMUST00000125793.2 |
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| CDS CCA 72 bp | TCATACAGGGTGAAAGCAGCATTGTCTAGCATCTTCTaGGCAGACACATGCAGACAATGGCTTTGGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SYRVKAALSSIF*ADTCRQWLWAP Trigger: AGGGGCCCAAAGCCATTGTCTGCATGTGTCTGCCCAGAAGATGCTAGACAATGCTGCTTTCACCCTGTATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS TCA 72 bp | GGGCAGACACATGCAGACAATGGCTTTGGGCCCCTGTaGAGTTCATGTAGCAGCACAAAGCACGATGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: GQTHADNGFGPL*SSCSSTKHDEN Trigger: ATTTTCATCGTGCTTTGTGCTGCTACATGAACTTCACAGGGGCCCAAAGCCATTGTCTGCATGTGTCTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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| CDS CAA 72 bp | TCATCCTGCCAGAACTCATACAGGGTGAAAGCAGCATaGTCTAGCATCTTCTGGGCAGACACATGCAGACAA | + |
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Preference number: 6 (lower is better) Translates to: SSCQNSYRVKAA*SSIFWADTCRQ Trigger: TTGTCTGCATGTGTCTGCCCAGAAGATGCTAGACAATGCTGCTTTCACCCTGTATGAGTTCTGGCAGGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000895.13 ENSMUST00000109716.9 |
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