Pregenerated sensors for NECAB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031837Ensembl transcript IDs: ENSMUST00000098363.10
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTaGCAGGTTGAGTCAGGTGTGGGGAATACCAGGGGATGGGCCGCC | + |
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Preference number: 1 (lower is better) Translates to: GRLAWEAIPTNLGLL*QVESGVGNTRGWAA Trigger: GGCGGCCCATCCCCTGGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR CCA 90 bp | CCATCCCTACTAACCTTGGCCTCCTCTGCCAGGTTGAGTCAGGTGTaGGGAATACCAGGGGATGGGCCGCCTCTGTGCCACACAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: PSLLTLASSARLSQV*GIPGDGPPLCHTAG Trigger: CCCTGCTGTGTGGCACAGAGGCGGCCCATCCCCTGGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTTAGTAGGGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGCCTAGCGTGATGCTGGGGACCTGGGCTCTCCCCAAGCCTAGGTTGGGTAGGTTGAGTCAGGTGTaGGGAATACCAGGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: CGPSVMLGTWALPKPRLGRLSQV*GIPGDG Trigger: CCCATCCCCTGGTATTCCCCACACCTGACTCAACCT...ACCCAACCTAGGCTTGGGGAGAGCCCAGGTCCCCAGCATCACGCTAGGCCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR CAA 90 bp | AAGCTGTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTaGGCCTCCTCTGCCAGGTTGAGTCAGGTGTGGGGAATACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: KLWMEGWPGKPSLLT*ASSARLSQVWGIPG Trigger: CCCTGGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCACAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR CAA 90 bp | ATGGGCCGCCTCTGTGCCACACAGCAGGGGGAAGTTACCAGTCCTTaGATTAGTATATTGAAAAGACAGCAGTTTACCAAAGTCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: MGRLCATQQGEVTSP*ISILKRQQFTKVSR Trigger: TCTAGAGACTTTGGTAAACTGCTGTCTTTTCAATATACTAATCAAAGGACTGGTAACTTCCCCCTGCTGTGTGGCACAGAGGCGGCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGCCTAGCGTGATGCTGGGGACCTGGGCTCTCCCCAAGCCTAGGTTGGGTGCTGTGGATGGAAGGTaGGCCTGGGAAGCCATCCCT | + |
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Preference number: 3 (lower is better) Translates to: CGPSVMLGTWALPKPRLGAVDGR*AWEAIP Trigger: AGGGATGGCTTCCCAGGCCAACCTTCCATCCACAGC...ACCCAACCTAGGCTTGGGGAGAGCCCAGGTCCCCAGCATCACGCTAGGCCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGCCTAGCGTGATGCTGGGGACCTGGGCTCTCCCCAAGCCTAGGTTGGGTCCATCCCTACTAACCTaGGCCTCCTCTGCCAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: CGPSVMLGTWALPKPRLGPSLLT*ASSARL Trigger: CAACCTGGCAGAGGAGGCCAAGGTTAGTAGGGATGG...ACCCAACCTAGGCTTGGGGAGAGCCCAGGTCCCCAGCATCACGCTAGGCCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR CCA 72 bp | CTAACCTTGGCCTCCTCTGCCAGGTTGAGTCAGGTGTaGGGAATACCAGGGGATGGGCCGCCTCTGTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LTLASSARLSQV*GIPGDGPPLCH Trigger: GTGGCACAGAGGCGGCCCATCCCCTGGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR CCA 72 bp | TTTGGTGGCTGTGGGCCTAGCGTGATGCTGGGGACCTaGGCTCTCCCCAAGCCTAGGTTGGGTACTACAGGG | + |
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Preference number: 3 (lower is better) Translates to: FGGCGPSVMLGT*ALPKPRLGTTG Trigger: CCCTGTAGTACCCAACCTAGGCTTGGGGAGAGCCCAGGTCCCCAGCATCACGCTAGGCCCACAGCCACCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR TCA 72 bp | CTAGCCAGACTTTATTTGGTGGCTGTGGGCCTAGCGTaGTGCTGGGGACCTGGGCTCTCCCCAAGCCTAGGT | + |
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Preference number: 3 (lower is better) Translates to: LARLYLVAVGLA*CWGPGLSPSLG Trigger: ACCTAGGCTTGGGGAGAGCCCAGGTCCCCAGCATCACGCTAGGCCCACAGCCACCAAATAAAGTCTGGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR GCA 72 bp | GCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTaGCAGGTTGAGTCAGGTGTGGGGAATACCAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: AWEAIPTNLGLL*QVESGVGNTRG Trigger: TCCCCTGGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | TGTGGGCCTAGCGTGATGCTGGGGACCTGGGCTCTCCCCAAGCCTAGGTTGGGTTCCCGGAGCAGCCTGTaGGCGCCGGCCCTGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: CGPSVMLGTWALPKPRLGSRSSL*APALHR Trigger: CCTGTGCAGGGCCGGCGCGCACAGGCTGCTCCGGGA...ACCCAACCTAGGCTTGGGGAGAGCCCAGGTCCCCAGCATCACGCTAGGCCCACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | AACCTTGGCCTCCTCTGCCAGGTTGAGTCAGGTGTGGGGAATACCAGGGGATGGGGGGTTCCCCCATCCTaGCGCCCACCCAGCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGLLCQVESGVGNTRGWGVPPS*RPPSAA Trigger: TGCTGCGCTGGGTGGGCGCCAGGATGGGGGAACCCC...CCATCCCCTGGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTT 64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | GTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCAGTCTCGGCCAGAGGTaGACCAGGCAGCTGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: VDGRLAWEAIPTNLGLLCSLGQR*TRQLAR Trigger: CCGTGCCAGCTGCCTGGTGCACCTCTGGCCGAGACT...GCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | GTTGAGTCAGGTGTGGGGAATACCAGGGGATGGGCCGCCTCTGTGCCACACAGCCCTTTGGCTCCCCTGTaGCCACAGGCAGGCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VESGVGNTRGWAASVPHSPLAPL*PQAGSS Trigger: TGAAGAGCCTGCCTGTGGCCACAGGGGAGCCAAAGG...GCTGTGTGGCACAGAGGCGGCCCATCCCCTGGTATTCCCCACACCTGACTCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | GGGGATGGGCCGCCTCTGTGCCACACAGCAGGGGGAAGTTACCAGTCCTTTGATCAGCCCATCCTCCTTTaGCTCCCCTGTGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDGPPLCHTAGGSYQSFDQPILL*LPCGHR Trigger: CCTGTGGCCACAGGGGAGCCAAAGGAGGATGGGCTG...ATCAAAGGACTGGTAACTTCCCCCTGCTGTGTGGCACAGAGGCGGCCCATCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR TCA 90 bp | TGTGGGCCTAGCGTGATGCTGGGGACCTGGGCTCTCCCCAAGCCTAGGTTGGGTCATGGCCTTCAGGACTaGGTGGTTCAAAGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: CGPSVMLGTWALPKPRLGHGLQD*VVQSLQ Trigger: CTGGAGACTTTGAACCACTCAGTCCTGAAGGCCATG...ACCCAACCTAGGCTTGGGGAGAGCCCAGGTCCCCAGCATCACGCTAGGCCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | CTGTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTCACACGGCCATTTCCTaGCGGACCAGCTGCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWMEGWPGKPSLLTLASSHTAIS*RTSCRC Trigger: GCACCTGCAGCTGGTCCGGCAGGAAATGGCCGTGTG...AGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | CTGTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCCAACCGGCTTATCTaGCCCTCCAGCCCATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LWMEGWPGKPSLLTLASSANRLI*PSSPSS Trigger: GGAGGATGGGCTGGAGGGCCAGATAAGCCGGTTGGC...AGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR CAA 72 bp | AAGCCATCCCTACTAACCTTGGCCTCCTCTGCCAGGTaGAGTCAGGTGTGGGGAATACCAGGGGATGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KPSLLTLASSAR*SQVWGIPGDGP Trigger: CGGCCCATCCCCTGGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTTAGTAGGGATGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | GTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCACAGGGCTCTGCAGGTaGCTCTTCCACTCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VDGRLAWEAIPTNLGLLCTGLCR*LFHSSS Trigger: AGAGGAGGAGTGGAAGAGGCACCTGCAGAGCCCTGT...GCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | GTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCTTGCACACAGGGCTCTaGAGGTGCCTCTTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VDGRLAWEAIPTNLGLLCLHTGL*RCLFHS Trigger: GGAGTGGAAGAGGCACCTGCAGAGCCCTGTGTGCAA...GCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | CTGTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTCGTGTCGGAAGGCCTTaGACACAGGGCTCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LWMEGWPGKPSLLTLASSRVGRP*TQGSAG Trigger: ACCTGCAGAGCCCTGTGTGCAAGGCCTTCCGACACG...AGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR TCA 90 bp | GGGGATGGGCCGCCTCTGTGCCACACAGCAGGGGGAAGTTACCAGTCCTTTGATCACTTTCCACAGAGCTaGGCAGCGACTGGATCTGAT | + |
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Preference number: 4 (lower is better) Translates to: GDGPPLCHTAGGSYQSFDHFPQS*AATGSD Trigger: ATCAGATCCAGTCGCTGCTCAGCTCTGTGGAAAGTG...ATCAAAGGACTGGTAACTTCCCCCTGCTGTGTGGCACAGAGGCGGCCCATCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | GTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCTCTCCCAATCAGCTCTaGCAACCGGCTTATCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VDGRLAWEAIPTNLGLLCSPNQL*QPAYLA Trigger: GGCCAGATAAGCCGGTTGGCAGAGCTGATTGGGAGA...GCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | AACCTTGGCCTCCTCTGCCAGGTTGAGTCAGGTGTGGGGAATACCAGGGGATGGGCAGGTGCATGTTGGTaGCTTCTTCATCCGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: NLGLLCQVESGVGNTRGWAGACW*LLHPRG Trigger: GCCTCTCGGATGAAGAAGGCACCAACATGCACCTGC...CCATCCCCTGGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | ATCCCTACTAACCTTGGCCTCCTCTGCCAGGTTGAGTCAGGTGTGGGGAATACCTCCTGCCGGACCAGCTaGAGGTGCATGTTGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: IPTNLGLLCQVESGVGNTSCRTS*RCMLVP Trigger: AGGCACCAACATGCACCTGCAGCTGGTCCGGCAGGA...GGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTTAGTAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | ATCCCTACTAACCTTGGCCTCCTCTGCCAGGTTGAGTCAGGTGTGGGGAATACCGCTGGCACGGAGATCTaGGAGAGTGCTTCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IPTNLGLLCQVESGVGNTAGTEI*ESASGW Trigger: CCAGCCTGAAGCACTCTCCCAGATCTCCGTGCCAGC...GGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTTAGTAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR TCA 90 bp | GCTGTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCAGCAGCGACTGGATCTaGTTGGCTGTCTCCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: AVDGRLAWEAIPTNLGLLSSDWI*LAVSFR Trigger: TCTGAAGGAGACAGCCAATCAGATCCAGTCGCTGCT...GAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | GCTGTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCAAGAACTCACTCAGCTaGTCAGGGCACACGGCCATT | + |
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Preference number: 4 (lower is better) Translates to: AVDGRLAWEAIPTNLGLLKNSLS*SGHTAI Trigger: AATGGCCGTGTGCCCTGAGCAGCTGAGTGAGTTCTT...GAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | GGGGATGGGCCGCCTCTGTGCCACACAGCAGGGGGAAGTTACCAGTCCTTTGATTGGTGTCCACGTGGTTaGTGTTGTCTGAATCGATGG | + |
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Preference number: 4 (lower is better) Translates to: GDGPPLCHTAGGSYQSFDWCPRG*CCLNRW Trigger: CCATCGATTCAGACAACACCAACCACGTGGACACCA...ATCAAAGGACTGGTAACTTCCCCCTGCTGTGTGGCACAGAGGCGGCCCATCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | GTTGAGTCAGGTGTGGGGAATACCAGGGGATGGGCCGCCTCTGTGCCACACAGCCTCACTGCGGCAACATaGAAGCAGTTCCTTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VESGVGNTRGWAASVPHSLTAAT*KQFLSS Trigger: TGAAGAAAGGAACTGCTTCCATGTTGCCGCAGTGAG...GCTGTGTGGCACAGAGGCGGCCCATCCCCTGGTATTCCCCACACCTGACTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | CTGTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCCTTCAGGACTGAGTaGTTCAAAGTCTCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LWMEGWPGKPSLLTLASSAFRTE*FKVSRE Trigger: CTCCCTGGAGACTTTGAACCACTCAGTCCTGAAGGC...AGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | CCTAGGTTGGGTACTACAGGGTCACAGCTCCTACTAGGTAGCGGGCCATCACAGTGGTCCTGTCGGATCTaGCTGGTCTGTTCTTCGATG | + |
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Preference number: 4 (lower is better) Translates to: PRLGTTGSQLLLGSGPSQWSCRI*LVCSSM Trigger: CATCGAAGAACAGACCAGCCAGATCCGACAGGACCA...CTGTGATGGCCCGCTACCTAGTAGGAGCTGTGACCCTGTAGTACCCAACCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | GTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCCAAACTGGTCCACATTaGTCCCACCTTCATACACCT | + |
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Preference number: 4 (lower is better) Translates to: VDGRLAWEAIPTNLGLLCQTGPH*SHLHTP Trigger: AGGTGTATGAAGGTGGGAGCAATGTGGACCAGTTTG...GCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | ATCCCTACTAACCTTGGCCTCCTCTGCCAGGTTGAGTCAGGTGTGGGGAATACCATCTGCCATCCTCACTaGGGCAACATGGAAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: IPTNLGLLCQVESGVGNTICHPH*GNMEAV Trigger: AACTGCTTCCATGTTGCCGCAGTGAGGATGGCAGAT...GGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTTAGTAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | AACCTTGGCCTCCTCTGCCAGGTTGAGTCAGGTGTGGGGAATACCAGGGGATGGTGGTCTGTTCTTCGATaGCTTCTACAGCACTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NLGLLCQVESGVGNTRGWWSVLR*LLQHFP Trigger: TGGAAAGTGCTGTAGAAGCCATCGAAGAACAGACCA...CCATCCCCTGGTATTCCCCACACCTGACTCAACCTGGCAGAGGAGGCCAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR GCA 90 bp | CTGTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTATTAAGGACGCCATCTaGGAAGAAGAGTTGAAACTC | + |
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Preference number: 4 (lower is better) Translates to: LWMEGWPGKPSLLTLASSIKDAI*EEELKL Trigger: GAGTTTCAACTCTTCTTCGCAGATGGCGTCCTTAAT...AGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR CAA 72 bp | CTCTGTGCCACACAGCAGGGGGAAGTTACCAGTCCTTaGATTAGTATATTGAAAAGACAGCAGTTTACCAAA | + |
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Preference number: 4 (lower is better) Translates to: LCATQQGEVTSP*ISILKRQQFTK Trigger: TTTGGTAAACTGCTGTCTTTTCAATATACTAATCAAAGGACTGGTAACTTCCCCCTGCTGTGTGGCACAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CCA 90 bp | GAAGTTACCAGTCCTTTGATTAGTATATTGAAAAGACAGCAGTTTACCAAAGTCAAGCGTGTCACAAACTaGTCCACATTGCTCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: EVTSPLISILKRQQFTKVKRVTN*STLLPP Trigger: AGGTGGGAGCAATGTGGACCAGTTTGTGACACGCTT...GACTTTGGTAAACTGCTGTCTTTTCAATATACTAATCAAAGGACTGGTAACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| 3UTR CAA 72 bp | CAGCAGGGGGAAGTTACCAGTCCTTTGATTAGTATATaGAAAAGACAGCAGTTTACCAAAGTCTCTAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: QQGEVTSPLISI*KRQQFTKVSRK Trigger: TTTTCTAGAGACTTTGGTAAACTGCTGTCTTTTCAATATACTAATCAAAGGACTGGTAACTTCCCCCTGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CCA 90 bp | ACCGGCTTATCTGGCCCTCCAGCCCATCCTCCTTTGGCTCCCCTGTaGCCACAGGCAGGCTCTTCATCGGCTCCGGGGCCACAAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: TGLSGPPAHPPLAPL*PQAGSSSAPGPQAC Trigger: ACAAGCTTGTGGCCCCGGAGCCGATGAAGAGCCTGCCTGTGGCCACAGGGGAGCCAAAGGAGGATGGGCTGGAGGGCCAGATAAGCCGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CCA 90 bp | GTCTTGCTCTCCAGTCTCCCAATCAGCTCTGCCAACCGGCTTATCTaGCCCTCCAGCCCATCCTCCTTTGGCTCCCCTGTGGCCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: VLLSSLPISSANRLI*PSSPSSFGSPVATG Trigger: GCCTGTGGCCACAGGGGAGCCAAAGGAGGATGGGCTGGAGGGCCAGATAAGCCGGTTGGCAGAGCTGATTGGGAGACTGGAGAGCAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CAA 90 bp | GTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCCCAGCCCATCCTCCTTaGGCTCCCCTGTGGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: VDGRLAWEAIPTNLGLLCPAHPP*APLWPQ Trigger: CTGTGGCCACAGGGGAGCCAAAGGAGGATGGGCTGG...GCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS TCA 90 bp | CGGAGATCTGGGAGAGTGCTTCAGGCTGGCTCAGCGTGTCAACCTTaGCGTGTCGGAAGGCCTTGCACACAGGGCTCTGCAGGTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: RRSGRVLQAGSACQP*RVGRPCTQGSAGAS Trigger: AGAGGCACCTGCAGAGCCCTGTGTGCAAGGCCTTCCGACACGTCAAGGTTGACACGCTGAGCCAGCCTGAAGCACTCTCCCAGATCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 90 bp | GGCACACGGCCATTTCCTGCCGGACCAGCTGCAGGTGCATGTTGGTaGCTTCTTCATCCGAGAGGCGCTGTTGCAGGTCAAACGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GTRPFPAGPAAGACW*LLHPRGAVAGQTRG Trigger: CCCTCTCGTTTGACCTGCAACAGCGCCTCTCGGATGAAGAAGGCACCAACATGCACCTGCAGCTGGTCCGGCAGGAAATGGCCGTGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 90 bp | GTGCTCCGGAGGTACTGTCTCAGGGAATCCAAGAACTCACTCAGCTaGTCAGGGCACACGGCCATTTCCTGCCGGACCAGCTGCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: VLRRYCLRESKNSLS*SGHTAISCRTSCRC Trigger: GCACCTGCAGCTGGTCCGGCAGGAAATGGCCGTGTGCCCTGAGCAGCTGAGTGAGTTCTTGGATTCCCTGAGACAGTACCTCCGGAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CAA 90 bp | GTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCACGTGTCGGAAGGCCTaGCACACAGGGCTCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: VDGRLAWEAIPTNLGLLCTCRKA*HTGLCR Trigger: CCTGCAGAGCCCTGTGTGCAAGGCCTTCCGACACGT...GCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CCA 90 bp | CAGGGCACACGGCCATTTCCTGCCGGACCAGCTGCAGGTGCATGTTaGTGCCTTCTTCATCCGAGAGGCGCTGTTGCAGGTCAAACGAGA | + |
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Preference number: 5 (lower is better) Translates to: QGTRPFPAGPAAGAC*CLLHPRGAVAGQTR Trigger: TCTCGTTTGACCTGCAACAGCGCCTCTCGGATGAAGAAGGCACCAACATGCACCTGCAGCTGGTCCGGCAGGAAATGGCCGTGTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 90 bp | CAGGTCAAACGAGAGGGTCTTGCTCTCCAGTCTCCCAATCAGCTCTaGCAACCGGCTTATCTGGCCCTCCAGCCCATCCTCCTTTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: QVKREGLALQSPNQL*QPAYLALQPILLWL Trigger: GAGCCAAAGGAGGATGGGCTGGAGGGCCAGATAAGCCGGTTGGCAGAGCTGATTGGGAGACTGGAGAGCAAGACCCTCTCGTTTGACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 90 bp | GAATCCAAGAACTCACTCAGCTGCTCAGGGCACACGGCCATTTCCTaGCGGACCAGCTGCAGGTGCATGTTGGTGCCTTCTTCATCCGAG | + |
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Preference number: 5 (lower is better) Translates to: ESKNSLSCSGHTAIS*RTSCRCMLVPSSSE Trigger: CTCGGATGAAGAAGGCACCAACATGCACCTGCAGCTGGTCCGGCAGGAAATGGCCGTGTGCCCTGAGCAGCTGAGTGAGTTCTTGGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CAA 90 bp | GTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTGCAGCTGCAGGTGCATGTaGGTGCCTTCTTCATCCGAG | + |
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Preference number: 5 (lower is better) Translates to: VDGRLAWEAIPTNLGLLCSCRCM*VPSSSE Trigger: CTCGGATGAAGAAGGCACCAACATGCACCTGCAGCT...GCAGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS TCA 90 bp | GCAGGTGCCTCTTCCACTCCTCCTCTGTCTCCCAGAACTCGTAGATaGCGAAGGTTAGGCCATCTGCCATCCTCACTGCGGCAACATGGA | + |
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Preference number: 5 (lower is better) Translates to: AGASSTPPLSPRTRR*RRLGHLPSSLRQHG Trigger: TCCATGTTGCCGCAGTGAGGATGGCAGATGGCCTAACCTTCGTCATCTACGAGTTCTGGGAGACAGAGGAGGAGTGGAAGAGGCACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 90 bp | CTTCTTCATCCGAGAGGCGCTGTTGCAGGTCAAACGAGAGGGTCTTaGTCTCCAGTCTCCCAATCAGCTCTGCCAACCGGCTTATCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LLHPRGAVAGQTRGS*SPVSQSALPTGLSG Trigger: GCCAGATAAGCCGGTTGGCAGAGCTGATTGGGAGACTGGAGAGCAAGACCCTCTCGTTTGACCTGCAACAGCGCCTCTCGGATGAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 90 bp | AGCTGCAGGTGCATGTTGGTGCCTTCTTCATCCGAGAGGCGCTGTTaGAGGTCAAACGAGAGGGTCTTGCTCTCCAGTCTCCCAATCAGC | + |
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Preference number: 5 (lower is better) Translates to: SCRCMLVPSSSERRC*RSNERVLLSSLPIS Trigger: GCTGATTGGGAGACTGGAGAGCAAGACCCTCTCGTTTGACCTGCAACAGCGCCTCTCGGATGAAGAAGGCACCAACATGCACCTGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 90 bp | CCATCCTCACTGCGGCAACATGGAAGCAGTTCCTTTCTTCAGCCGTaGTCCGGAGGTACTGTCTCAGGGAATCCAAGAACTCACTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PSSLRQHGSSSFLQP*SGGTVSGNPRTHSA Trigger: AGCTGAGTGAGTTCTTGGATTCCCTGAGACAGTACCTCCGGAGCACGGCTGAAGAAAGGAACTGCTTCCATGTTGCCGCAGTGAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS-3UTR CAA 90 bp | CTGTGGATGGAAGGTTGGCCTGGGAAGCCATCCCTACTAACCTTGGCCTCCTCTATCTGCGAAGAAGAGTaGAAACTCCTCCAGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: LWMEGWPGKPSLLTLASSICEEE*KLLQGQ Trigger: CTGTCCCTGGAGGAGTTTCAACTCTTCTTCGCAGAT...AGAGGAGGCCAAGGTTAGTAGGGATGGCTTCCCAGGCCAACCTTCCATCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS TCA 90 bp | CCCACCTTCATACACCTTCTTAGTGTAGCCCATGGCCTTCAGGACTaGGTGGTTCAAAGTCTCCAGGGAGGCCAGGACATCTTCATAGTC | + |
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Preference number: 5 (lower is better) Translates to: PTFIHLLSVAHGLQD*VVQSLQGGQDIFIV Trigger: GACTATGAAGATGTCCTGGCCTCCCTGGAGACTTTGAACCACTCAGTCCTGAAGGCCATGGGCTACACTAAGAAGGTGTATGAAGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CCA 90 bp | TGTGCTCCACAAAGTAGTCACACAGTTCCTTGGTGTCCACGTGGTTaGTGTTGTCTGAATCGATGGTATGGAAGAGGCCCTCCAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: CAPQSSHTVPWCPRG*CCLNRWYGRGPPAP Trigger: AGGAGCTGGAGGGCCTCTTCCATACCATCGATTCAGACAACACCAACCACGTGGACACCAAGGAACTGTGTGACTACTTTGTGGAGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CCA 90 bp | CTTCATAGTCTCCCATGTGCTCCACAAAGTAGTCACACAGTTCCTTaGTGTCCACGTGGTTGGTGTTGTCTGAATCGATGGTATGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LHSLPCAPQSSHTVP*CPRGWCCLNRWYGR Trigger: TCTTCCATACCATCGATTCAGACAACACCAACCACGTGGACACCAAGGAACTGTGTGACTACTTTGTGGAGCACATGGGAGACTATGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CCA 72 bp | TCTGGCCCTCCAGCCCATCCTCCTTTGGCTCCCCTGTaGCCACAGGCAGGCTCTTCATCGGCTCCGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SGPPAHPPLAPL*PQAGSSSAPGP Trigger: TGGCCCCGGAGCCGATGAAGAGCCTGCCTGTGGCCACAGGGGAGCCAAAGGAGGATGGGCTGGAGGGCCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CAA 90 bp | GCTTCAGGCTGGCTCAGCGTGTCAACCTTGACGTGTCGGAAGGCCTaGCACACAGGGCTCTGCAGGTGCCTCTTCCACTCCTCCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ASGWLSVSTLTCRKA*HTGLCRCLFHSSSV Trigger: GACAGAGGAGGAGTGGAAGAGGCACCTGCAGAGCCCTGTGTGCAAGGCCTTCCGACACGTCAAGGTTGACACGCTGAGCCAGCCTGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CAA 90 bp | ACGGAGATCTGGGAGAGTGCTTCAGGCTGGCTCAGCGTGTCAACCTaGACGTGTCGGAAGGCCTTGCACACAGGGCTCTGCAGGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TEIWESASGWLSVST*TCRKALHTGLCRCL Trigger: GAGGCACCTGCAGAGCCCTGTGTGCAAGGCCTTCCGACACGTCAAGGTTGACACGCTGAGCCAGCCTGAAGCACTCTCCCAGATCTCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS TCA 72 bp | GGGAGAGTGCTTCAGGCTGGCTCAGCGTGTCAACCTTaGCGTGTCGGAAGGCCTTGCACACAGGGCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GRVLQAGSACQP*RVGRPCTQGSA Trigger: TGCAGAGCCCTGTGTGCAAGGCCTTCCGACACGTCAAGGTTGACACGCTGAGCCAGCCTGAAGCACTCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 72 bp | CGAGAGGGTCTTGCTCTCCAGTCTCCCAATCAGCTCTaGCAACCGGCTTATCTGGCCCTCCAGCCCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: REGLALQSPNQL*QPAYLALQPIL Trigger: GAGGATGGGCTGGAGGGCCAGATAAGCCGGTTGGCAGAGCTGATTGGGAGACTGGAGAGCAAGACCCTCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 72 bp | CCGAGAGGCGCTGTTGCAGGTCAAACGAGAGGGTCTTaGTCTCCAGTCTCCCAATCAGCTCTGCCAACCGGC | + |
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Preference number: 6 (lower is better) Translates to: PRGAVAGQTRGS*SPVSQSALPTG Trigger: GCCGGTTGGCAGAGCTGATTGGGAGACTGGAGAGCAAGACCCTCTCGTTTGACCTGCAACAGCGCCTCTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CCA 72 bp | CGGCCATTTCCTGCCGGACCAGCTGCAGGTGCATGTTaGTGCCTTCTTCATCCGAGAGGCGCTGTTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RPFPAGPAAGAC*CLLHPRGAVAG Trigger: ACCTGCAACAGCGCCTCTCGGATGAAGAAGGCACCAACATGCACCTGCAGCTGGTCCGGCAGGAAATGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CAA 72 bp | TGGGAGAGTGCTTCAGGCTGGCTCAGCGTGTCAACCTaGACGTGTCGGAAGGCCTTGCACACAGGGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: WESASGWLSVST*TCRKALHTGLC Trigger: GCAGAGCCCTGTGTGCAAGGCCTTCCGACACGTCAAGGTTGACACGCTGAGCCAGCCTGAAGCACTCTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CAA 90 bp | TCAGGGCACACGGCCATTTCCTGCCGGACCAGCTGCAGGTGCATGTaGGTGCCTTCTTCATCCGAGAGGCGCTGTTGCAGGTCAAACGAG | + |
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Preference number: 6 (lower is better) Translates to: SGHTAISCRTSCRCM*VPSSSERRCCRSNE Trigger: CTCGTTTGACCTGCAACAGCGCCTCTCGGATGAAGAAGGCACCAACATGCACCTGCAGCTGGTCCGGCAGGAAATGGCCGTGTGCCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CAA 72 bp | TCCGAGAGGCGCTGTTGCAGGTCAAACGAGAGGGTCTaGCTCTCCAGTCTCCCAATCAGCTCTGCCAACCGG | + |
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Preference number: 6 (lower is better) Translates to: SERRCCRSNERV*LSSLPISSANR Trigger: CCGGTTGGCAGAGCTGATTGGGAGACTGGAGAGCAAGACCCTCTCGTTTGACCTGCAACAGCGCCTCTCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 72 bp | CCATTTCCTGCCGGACCAGCTGCAGGTGCATGTTGGTaGCTTCTTCATCCGAGAGGCGCTGTTGCAGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: PFPAGPAAGACW*LLHPRGAVAGQ Trigger: TTGACCTGCAACAGCGCCTCTCGGATGAAGAAGGCACCAACATGCACCTGCAGCTGGTCCGGCAGGAAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 72 bp | AGGTACTGTCTCAGGGAATCCAAGAACTCACTCAGCTaGTCAGGGCACACGGCCATTTCCTGCCGGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: RYCLRESKNSLS*SGHTAISCRTS Trigger: GCTGGTCCGGCAGGAAATGGCCGTGTGCCCTGAGCAGCTGAGTGAGTTCTTGGATTCCCTGAGACAGTACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CAA 90 bp | CCTTCTTCATCCGAGAGGCGCTGTTGCAGGTCAAACGAGAGGGTCTaGCTCTCCAGTCTCCCAATCAGCTCTGCCAACCGGCTTATCTGG | + |
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Preference number: 6 (lower is better) Translates to: PSSSERRCCRSNERV*LSSLPISSANRLIW Trigger: CCAGATAAGCCGGTTGGCAGAGCTGATTGGGAGACTGGAGAGCAAGACCCTCTCGTTTGACCTGCAACAGCGCCTCTCGGATGAAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CAA 90 bp | CAGCTGCAGGTGCATGTTGGTGCCTTCTTCATCCGAGAGGCGCTGTaGCAGGTCAAACGAGAGGGTCTTGCTCTCCAGTCTCCCAATCAG | + |
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Preference number: 6 (lower is better) Translates to: QLQVHVGAFFIREAL*QVKREGLALQSPNQ Trigger: CTGATTGGGAGACTGGAGAGCAAGACCCTCTCGTTTGACCTGCAACAGCGCCTCTCGGATGAAGAAGGCACCAACATGCACCTGCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS GCA 72 bp | TGCATGTTGGTGCCTTCTTCATCCGAGAGGCGCTGTTaGAGGTCAAACGAGAGGGTCTTGCTCTCCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CMLVPSSSERRC*RSNERVLLSSL Trigger: GAGACTGGAGAGCAAGACCCTCTCGTTTGACCTGCAACAGCGCCTCTCGGATGAAGAAGGCACCAACATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CAA 72 bp | GTGCATGTTGGTGCCTTCTTCATCCGAGAGGCGCTGTaGCAGGTCAAACGAGAGGGTCTTGCTCTCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: VHVGAFFIREAL*QVKREGLALQS Trigger: AGACTGGAGAGCAAGACCCTCTCGTTTGACCTGCAACAGCGCCTCTCGGATGAAGAAGGCACCAACATGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS TCA 72 bp | ACACAGTTCCTTGGTGTCCACGTGGTTGGTGTTGTCTaGATCGATGGTATGGAAGAGGCCCTCCAGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: TQFLGVHVVGVV*IDGMEEALQLL Trigger: AAGGAGCTGGAGGGCCTCTTCCATACCATCGATTCAGACAACACCAACCACGTGGACACCAAGGAACTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS TCA 72 bp | ACAGCACTTTCCACAGAGCTGAGCAGCGACTGGATCTaGTTGGCTGTCTCCTTCAGAAGGAAGCGTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: TALSTELSSDWI*LAVSFRRKRVT Trigger: TGTGACACGCTTCCTTCTGAAGGAGACAGCCAATCAGATCCAGTCGCTGCTCAGCTCTGTGGAAAGTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS TCA 72 bp | GTTCTTCGATGGCTTCTACAGCACTTTCCACAGAGCTaGGCAGCGACTGGATCTGATTGGCTGTCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VLRWLLQHFPQS*AATGSDWLSPS Trigger: TGAAGGAGACAGCCAATCAGATCCAGTCGCTGCTCAGCTCTGTGGAAAGTGCTGTAGAAGCCATCGAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CCA 72 bp | CAAAGTAGTCACACAGTTCCTTGGTGTCCACGTGGTTaGTGTTGTCTGAATCGATGGTATGGAAGAGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: QSSHTVPWCPRG*CCLNRWYGRGP Trigger: AGGGCCTCTTCCATACCATCGATTCAGACAACACCAACCACGTGGACACCAAGGAACTGTGTGACTACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CCA 72 bp | TTGGCTGTCTCCTTCAGAAGGAAGCGTGTCACAAACTaGTCCACATTGCTCCCACCTTCATACACCTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LAVSFRRKRVTN*STLLPPSYTFL Trigger: TAAGAAGGTGTATGAAGGTGGGAGCAATGTGGACCAGTTTGTGACACGCTTCCTTCTGAAGGAGACAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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| CDS CAA 72 bp | CTCCTTCTCATTAAGGACGCCATCTGCGAAGAAGAGTaGAAACTCCTCCAGGGACAGCTTCCCATCATCATT | + |
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Preference number: 6 (lower is better) Translates to: LLLIKDAICEEE*KLLQGQLPIII Trigger: AATGATGATGGGAAGCTGTCCCTGGAGGAGTTTCAACTCTTCTTCGCAGATGGCGTCCTTAATGAGAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098363.10 |
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