Pregenerated sensors for NECAB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040536Ensembl transcript IDs: ENSMUST00000041606.14, ENSMUST00000108273.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAAGTCTCAGCAGCCATCAGATAACTCCAGTGATGTCTTGTCTTaGACACCTGTGACAGAAGAGCTGCGGCAAGCTCTGCTTCATACT | + |
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Preference number: 1 (lower is better) Translates to: RKSQQPSDNSSDVLS*TPVTEELRQALLHT Trigger: AGTATGAAGCAGAGCTTGCCGCAGCTCTTCTGTCACAGGTGTGCAAGACAAGACATCACTGGAGTTATCTGATGGCTGCTGAGACTTCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR GCA 90 bp | TCTCTTCCTGAATGTGAAGTTCTAAACCCAGTGCCTCTTGCTTGCTaGTGTGGGGATGCTTGCCCAGATCCTAACATTCAGTCCACAGTC | + |
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Preference number: 1 (lower is better) Translates to: SLPECEVLNPVPLAC*CGDACPDPNIQSTV Trigger: GACTGTGGACTGAATGTTAGGATCTGGGCAAGCATCCCCACAGCAGCAAGCAAGAGGCACTGGGTTTAGAACTTCACATTCAGGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR GCA 90 bp | TCGTCTCTTCCTGAATGTGAAGTTCTAAACCCAGTGCCTCTTGCTTaGTGCTGTGGGGATGCTTGCCCAGATCCTAACATTCAGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: SSLPECEVLNPVPLA*CCGDACPDPNIQST Trigger: TGTGGACTGAATGTTAGGATCTGGGCAAGCATCCCCACAGCAGCAAGCAAGAGGCACTGGGTTTAGAACTTCACATTCAGGAAGAGACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR TCA 90 bp | CCTCATTGTGAAAGCATTTATCCCAGGATTTTCCAGAAGCATGTGTaGTTACAGCCTCCTGCGCTTCAGAGCTTATCACAGAGACCACAG | + |
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Preference number: 1 (lower is better) Translates to: PHCESIYPRIFQKHV*LQPPALQSLSQRPQ Trigger: CTGTGGTCTCTGTGATAAGCTCTGAAGCGCAGGAGGCTGTAATCACACATGCTTCTGGAAAATCCTGGGATAAATGCTTTCACAATGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR TCA 90 bp | TTAAAGAGTGTGCCAACACACAGTGAACAAAGGTATGCAGCTGATTaGCGACCACAGAGAACTTCCCAGTTTACGTTTCAGATAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: LKSVPTHSEQRYAAD*RPQRTSQFTFQIRT Trigger: TGTTCTTATCTGAAACGTAAACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTGTTGGCACACTCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| 3UTR GCA 90 bp | CAGAGATTTATAAGCATTTGTATGAGAGCATCACGTGATAGTAGTTaGATGTGTATTTTTGTAGCAGAGTCTATAAGCAGAACCTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: QRFISICMRASRDSS*MCIFVAESISRTSR Trigger: CCTAGAGGTTCTGCTTATAGACTCTGCTACAAAAATACACATGCAACTACTATCACGTGATGCTCTCATACAAATGCTTATAAATCTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR GCA 90 bp | CAGAGACCACAGTACGTCCCCTGTGCTGTAGGAGAGCTCTGCTGTCCCCTTCCCTACTGCTTGCCCCCTTaGAATCTGAATGCAGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: QRPQYVPCAVGELCCPLPYCLPP*NLNAVH Trigger: ATGCACTGCATTCAGATTGCAAGGGGGCAAGCAGTA...GGGAAGGGGACAGCAGAGCTCTCCTACAGCACAGGGGACGTACTGTGGTCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR CAA 90 bp | ATGGACAGGAAGTCTCAGCAGCCATCAGATAACTCCAGTGATGTCTaGTCTTGCACACCTGTGACAGAAGAGCTGCGGCAAGCTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: MDRKSQQPSDNSSDV*SCTPVTEELRQALL Trigger: AAGCAGAGCTTGCCGCAGCTCTTCTGTCACAGGTGTGCAAGACAAGACATCACTGGAGTTATCTGATGGCTGCTGAGACTTCCTGTCCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR TCA 90 bp | TGTGATTGTGTGTGCTGCTCCTACTATTTTCATTTTAGTCATAGGATCCAGTATTTCCAGAAGCATGTGTaGTTACAGCCTCCTGCGCTT | + |
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Preference number: 2 (lower is better) Translates to: CDCVCCSYYFHFSHRIQYFQKHV*LQPPAL Trigger: AAGCGCAGGAGGCTGTAATCACACATGCTTCTGGAA...ATACTGGATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR CCA 90 bp | TGTGATTGTGTGTGCTGCTCCTACTATTTTCATTTTAGTCATAGGATCCAGTATTCCAAACTCTGTTTCTaGGAAGAGCGCCCTTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: CDCVCCSYYFHFSHRIQYSKLCF*EERPFQ Trigger: CTGAAAAGGGCGCTCTTCCCAGAAACAGAGTTTGGA...ATACTGGATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR GCA 90 bp | GTAAATATAAGCTCACTACTTTTATTCATTTGTGTCTTGGGATCACGAGAAGGTGTGATTACAGCCTCCTaGGCTTCAGAGCTTATCACA | + |
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Preference number: 2 (lower is better) Translates to: VNISSLLLFICVLGSREGVITAS*ASELIT Trigger: TGTGATAAGCTCTGAAGCGCAGGAGGCTGTAATCAC...ACCTTCTCGTGATCCCAAGACACAAATGAATAAAAGTAGTGAGCTTATATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR TCA 90 bp | AACAACATTTATAAAACTAGGCACCACAGGAATAGAACACAGACTTGGAATACATGGGGATGTTGTTGGTaGAGTGGGAAGACTGTATTA | + |
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Preference number: 2 (lower is better) Translates to: NNIYKTRHHRNRTQTWNTWGCCW*SGKTVL Trigger: TAATACAGTCTTCCCACTTCACCAACAACATCCCCA...TGTATTCCAAGTCTGTGTTCTATTCCTGTGGTGCCTAGTTTTATAAATGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR TCA 90 bp | AACAACATTTATAAAACTAGGCACCACAGGAATAGAACACAGACTTGGAATACATTGCAGTCCTCATTGTaGAAGCATTTATCCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: NNIYKTRHHRNRTQTWNTLQSSL*KHLSQD Trigger: ATCCTGGGATAAATGCTTTCACAATGAGGACTGCAA...TGTATTCCAAGTCTGTGTTCTATTCCTGTGGTGCCTAGTTTTATAAATGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR TCA 90 bp | AACAACATTTATAAAACTAGGCACCACAGGAATAGAACACAGACTTGGAATACATACCACTTTACAACATaGGAGATAGACAGAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: NNIYKTRHHRNRTQTWNTYHFTT*EIDRAS Trigger: AGAAGCTCTGTCTATCTCTCATGTTGTAAAGTGGTA...TGTATTCCAAGTCTGTGTTCTATTCCTGTGGTGCCTAGTTTTATAAATGTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR CAA 90 bp | AATAGGGAGAAATACCCCTTCATTAGGCATAAGTTTATTGTTTGTTaGAAAATGAGACATTCTATAGGGCTATTGTGTGATTGTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: NREKYPFIRHKFIVC*KMRHSIGLLCDCVC Trigger: GCACACACAATCACACAATAGCCCTATAGAATGTCTCATTTTCAAACAAACAATAAACTTATGCCTAATGAAGGGGTATTTCTCCCTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR TCA 90 bp | AACAACATTTATAAAACTAGGCACCACAGGAATAGAACACAGACTTGGAATACAAGGTGGAAAGTAGCTTaGTGTTCTTCATCAGATTAT | + |
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Preference number: 2 (lower is better) Translates to: NNIYKTRHHRNRTQTWNTRWKVA*CSSSDY Trigger: ATAATCTGATGAAGAACATCAAGCTACTTTCCACCT...TGTATTCCAAGTCTGTGTTCTATTCCTGTGGTGCCTAGTTTTATAAATGTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR GCA 90 bp | GTAAATATAAGCTCACTACTTTTATTCATTTGTGTCTTGGGATCACGAGAAGGTTGTGATTGTGTGTGCTaGTCCTACTATTTTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: VNISSLLLFICVLGSREGCDCVC*SYYFHF Trigger: AAAATGAAAATAGTAGGAGCAGCACACACAATCACA...ACCTTCTCGTGATCCCAAGACACAAATGAATAAAAGTAGTGAGCTTATATTTAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR CCA 90 bp | GTAAATATAAGCTCACTACTTTTATTCATTTGTGTCTTGGGATCACGAGAAGGTTCTCAGAGAAAGGGTTaGTTTTTAATAGGGAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: VNISSLLLFICVLGSREGSQRKG*FLIGRN Trigger: ATTTCTCCCTATTAAAAACCAACCCTTTCTCTGAGA...ACCTTCTCGTGATCCCAAGACACAAATGAATAAAAGTAGTGAGCTTATATTTAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR GCA 72 bp | AGACCACAGTACGTCCCCTGTGCTGTAGGAGAGCTCTaGTGTCCCCTTCCCTTTCCCACGATGGACAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RPQYVPCAVGEL*CPLPFPTMDRK Trigger: CTTCCTGTCCATCGTGGGAAAGGGAAGGGGACAGCAGAGCTCTCCTACAGCACAGGGGACGTACTGTGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR GCA 72 bp | TGTGACAGAAGAGCTGCGGCAAGCTCTGCTTCATACTaGTTGCCCCCTTGCAATCTGAATGCAGTGCATGTG | + |
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Preference number: 3 (lower is better) Translates to: CDRRAAASSASY*LPPCNLNAVHV Trigger: CACATGCACTGCATTCAGATTGCAAGGGGGCAAGCAGTATGAAGCAGAGCTTGCCGCAGCTCTTCTGTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR GCA 72 bp | CAGCAGCCATCAGATAACTCCAGTGATGTCTTGTCTTaGACACCTGTGACAGAAGAGCTGCGGCAAGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: QQPSDNSSDVLS*TPVTEELRQAL Trigger: CAGAGCTTGCCGCAGCTCTTCTGTCACAGGTGTGCAAGACAAGACATCACTGGAGTTATCTGATGGCTGCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR TCA 72 bp | CAGATAACTCCAGTGATGTCTTGTCTTGCACACCTGTaGCAGAAGAGCTGCGGCAAGCTCTGCTTCATACTG | + |
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Preference number: 3 (lower is better) Translates to: QITPVMSCLAHL*QKSCGKLCFIL Trigger: CAGTATGAAGCAGAGCTTGCCGCAGCTCTTCTGTCACAGGTGTGCAAGACAAGACATCACTGGAGTTATCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR GCA 72 bp | GAATGTGAAGTTCTAAACCCAGTGCCTCTTGCTTGCTaGTGTGGGGATGCTTGCCCAGATCCTAACATTCAG | + |
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Preference number: 3 (lower is better) Translates to: ECEVLNPVPLAC*CGDACPDPNIQ Trigger: CTGAATGTTAGGATCTGGGCAAGCATCCCCACAGCAGCAAGCAAGAGGCACTGGGTTTAGAACTTCACATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR GCA 72 bp | CCTGAATGTGAAGTTCTAAACCCAGTGCCTCTTGCTTaGTGCTGTGGGGATGCTTGCCCAGATCCTAACATT | + |
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Preference number: 3 (lower is better) Translates to: PECEVLNPVPLA*CCGDACPDPNI Trigger: AATGTTAGGATCTGGGCAAGCATCCCCACAGCAGCAAGCAAGAGGCACTGGGTTTAGAACTTCACATTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR GCA 72 bp | CAGGATTTTCCAGAAGCATGTGTGATTACAGCCTCCTaGGCTTCAGAGCTTATCACAGAGACCACAGTACGT | + |
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Preference number: 3 (lower is better) Translates to: QDFPEACVITAS*ASELITETTVR Trigger: ACGTACTGTGGTCTCTGTGATAAGCTCTGAAGCGCAGGAGGCTGTAATCACACATGCTTCTGGAAAATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR TCA 72 bp | GTGCCAACACACAGTGAACAAAGGTATGCAGCTGATTaGCGACCACAGAGAACTTCCCAGTTTACGTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: VPTHSEQRYAAD*RPQRTSQFTFQ Trigger: CTGAAACGTAAACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTGTTGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| 3UTR GCA 72 bp | CTCTGCTTCATACTGCTTGCCCCCTTGCAATCTGAATaGAGTGCATGTGTGCGTGTAAAAATTGCTAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: LCFILLAPLQSE*SACVRVKIASV Trigger: GACACTAGCAATTTTTACACGCACACATGCACTGCATTCAGATTGCAAGGGGGCAAGCAGTATGAAGCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR TCA 72 bp | GAAAGCATTTATCCCAGGATTTTCCAGAAGCATGTGTaGTTACAGCCTCCTGCGCTTCAGAGCTTATCACAG | + |
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Preference number: 3 (lower is better) Translates to: ESIYPRIFQKHV*LQPPALQSLSQ Trigger: CTGTGATAAGCTCTGAAGCGCAGGAGGCTGTAATCACACATGCTTCTGGAAAATCCTGGGATAAATGCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR CCA 72 bp | GATCCTAACATTCAGTCCACAGTCGATGTCCCAGCTTaGCCTTTCAGTAGACTCTTGTTCATTACGTGGATT | + |
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Preference number: 3 (lower is better) Translates to: DPNIQSTVDVPA*PFSRLLFITWI Trigger: AATCCACGTAATGAACAAGAGTCTACTGAAAGGCCAAGCTGGGACATCGACTGTGGACTGAATGTTAGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR TCA 72 bp | TTAGGACAGCATTGCGATTGGTTGCAGTCCTCATTGTaGAAGCATTTATCCCAGGATTTTCCAGAAGCATGT | + |
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Preference number: 3 (lower is better) Translates to: LGQHCDWLQSSL*KHLSQDFPEAC Trigger: ACATGCTTCTGGAAAATCCTGGGATAAATGCTTTCACAATGAGGACTGCAACCAATCGCAATGCTGTCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR CAA 90 bp | TTTAGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTTGGGGGTAGCATATATTTTATGGTTGGGGTaGTCACAATATGAGGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: FRAVGFNVWVATSLGVAYILWLG*SQYEES Trigger: ACTTTCCTCATATTGTGACAACCCCAACCATAAAAT...ATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| 3UTR GCA 72 bp | ATGAGACATTCTATAGGGCTATTGTGTGATTGTGTGTaGTGCTCCTACTATTTTCATTTTAGTCATAGGATC | + |
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Preference number: 3 (lower is better) Translates to: MRHSIGLLCDCV*CSYYFHFSHRI Trigger: GATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACACAATAGCCCTATAGAATGTCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR CAA 90 bp | TGTGATTGTGTGTGCTGCTCCTACTATTTTCATTTTAGTCATAGGATCCAGTATATTTTATGGTTGGGGTaGTCACAATATGAGGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: CDCVCCSYYFHFSHRIQYILWLG*SQYEES Trigger: ACTTTCCTCATATTGTGACAACCCCAACCATAAAAT...ATACTGGATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR-3UTR CAA 90 bp | TGTGATTGTGTGTGCTGCTCCTACTATTTTCATTTTAGTCATAGGATCCAGTATAGACTAACTCCTACTTaGAAAAACTACCTAGTGTAC | + |
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Preference number: 3 (lower is better) Translates to: CDCVCCSYYFHFSHRIQYRLTPT*KNYLVY Trigger: GTACACTAGGTAGTTTTTCAAAGTAGGAGTTAGTCT...ATACTGGATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR GCA 72 bp | ATAAGCATTTGTATGAGAGCATCACGTGATAGTAGTTaGATGTGTATTTTTGTAGCAGAGTCTATAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: ISICMRASRDSS*MCIFVAESISR Trigger: TCTGCTTATAGACTCTGCTACAAAAATACACATGCAACTACTATCACGTGATGCTCTCATACAAATGCTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR TCA 72 bp | ATAGATTGTTCACTTGTAAAATACCACTTTACAACATaGGAGATAGACAGAGCTTCTATAGGCTATAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: IDCSLVKYHFTT*EIDRASIGYSL Trigger: TAGGCTATAGCCTATAGAAGCTCTGTCTATCTCTCATGTTGTAAAGTGGTATTTTACAAGTGAACAATCTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| 3UTR GCA 72 bp | GAAGTGGGAAGACTGTATTATAATTTGCATGCTACTTaGAATTCTTGTTTCTCACCACTTGTAATAATGGAA | + |
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Preference number: 3 (lower is better) Translates to: EVGRLYYNLHAT*NSCFSPLVIME Trigger: TTCCATTATTACAAGTGGTGAGAAACAAGAATTGCAAGTAGCATGCAAATTATAATACAGTCTTCCCACTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR CCA 90 bp | CAGAGACCACAGTACGTCCCCTGTGCTGTAGGAGAGCTCTGCTGTCCCCTTCCCTCTGTCACAGACATCTaGCGCTGCACAAGCATGATG | + |
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Preference number: 4 (lower is better) Translates to: QRPQYVPCAVGELCCPLPSVTDI*RCTSMM Trigger: CATCATGCTTGTGCAGCGCCAGATGTCTGTGACAGA...GGGAAGGGGACAGCAGAGCTCTCCTACAGCACAGGGGACGTACTGTGGTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR TCA 90 bp | CAGAGACCACAGTACGTCCCCTGTGCTGTAGGAGAGCTCTGCTGTCCCCTTCCCTGGAGAGACTGCAACTaGTTCAAGGTCTCCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: QRPQYVPCAVGELCCPLPWRDCN*FKVSFN Trigger: GTTGAAGGAGACCTTGAATCAGTTGCAGTCTCTCCA...GGGAAGGGGACAGCAGAGCTCTCCTACAGCACAGGGGACGTACTGTGGTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR TCA 90 bp | GTCTTGCACACCTGTGACAGAAGAGCTGCGGCAAGCTCTGCTTCATACTGCTTGCGCTTTCCAGGCCATTaGATGGACAGGACTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VLHTCDRRAAASSASYCLRFPGH*MDRTSG Trigger: GCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCG...CAAGCAGTATGAAGCAGAGCTTGCCGCAGCTCTTCTGTCACAGGTGTGCAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR TCA 90 bp | GCGGCAAGCTCTGCTTCATACTGCTTGCCCCCTTGCAATCTGAATGCAGTGCATCGCAGGCATCCACTTTaGGCTGAAGCACTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: AASSASYCLPPCNLNAVHRRHPL*AEALST Trigger: TGTGGAGAGTGCTTCAGCTCAAAGTGGATGCCTGCG...ATGCACTGCATTCAGATTGCAAGGGGGCAAGCAGTATGAAGCAGAGCTTGCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR GCA 90 bp | CAGAGACCACAGTACGTCCCCTGTGCTGTAGGAGAGCTCTGCTGTCCCCTTCCCCCAAGAAATCCACGTTaGTTCTTTGGAACGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: QRPQYVPCAVGELCCPLPPRNPR*FFGTSC Trigger: GCAAGACGTTCCAAAGAAGCAACGTGGATTTCTTGG...GGGAAGGGGACAGCAGAGCTCTCCTACAGCACAGGGGACGTACTGTGGTCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR CCA 90 bp | CCCTGTGCTGTAGGAGAGCTCTGCTGTCCCCTTCCCTTTCCCACGATGGACAGGCCATTGCCTTCAGGATaGAGAGATTCAGGTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: PCAVGELCCPLPFPTMDRPLPSG*RDSGLQ Trigger: TTGAAGACCTGAATCTCTCCATCCTGAAGGCAATGG...CCTGTCCATCGTGGGAAAGGGAAGGGGACAGCAGAGCTCTCCTACAGCACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR CCA 90 bp | CAGAGACCACAGTACGTCCCCTGTGCTGTAGGAGAGCTCTGCTGTCCCCTTCCCGGTAGATGTGAGCTCTaGAGTTTCCAAGAAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: QRPQYVPCAVGELCCPLPGRCEL*SFQEIH Trigger: GTGGATTTCTTGGAAACTCCAGAGCTCACATCTACC...GGGAAGGGGACAGCAGAGCTCTCCTACAGCACAGGGGACGTACTGTGGTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| 3UTR CAA 72 bp | GACAGAAGAGCTGCGGCAAGCTCTGCTTCATACTGCTaGCCCCCTTGCAATCTGAATGCAGTGCATGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: DRRAAASSASYC*PPCNLNAVHVC Trigger: GCACACATGCACTGCATTCAGATTGCAAGGGGGCAAGCAGTATGAAGCAGAGCTTGCCGCAGCTCTTCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR TCA 90 bp | CCCTGTGCTGTAGGAGAGCTCTGCTGTCCCCTTCCCTTTCCCACGATGGACAGGGTAGTTCTTCTCCACTaGGAACTCCATCTGCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: PCAVGELCCPLPFPTMDRVVLLH*ELHLQN Trigger: ATTTTGCAGATGGAGTTCTCAGTGGAGAAGAACTAC...CCTGTCCATCGTGGGAAAGGGAAGGGGACAGCAGAGCTCTCCTACAGCACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR TCA 90 bp | GCGGCAAGCTCTGCTTCATACTGCTTGCCCCCTTGCAATCTGAATGCAGTGCATGCATCCACTTTGAGCTaGAGCACTCTCCACATAGTG | + |
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Preference number: 4 (lower is better) Translates to: AASSASYCLPPCNLNAVHASTLS*STLHIV Trigger: CACTATGTGGAGAGTGCTTCAGCTCAAAGTGGATGC...ATGCACTGCATTCAGATTGCAAGGGGGCAAGCAGTATGAAGCAGAGCTTGCCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
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| CDS-3UTR CCA 90 bp | TGTACATCAGCACCTGACCAGGACTATGATGTCTGCAGAGCCCAGAATGATTCTTCTGGACTCGGCGGCTaGATCGCTTTCCAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CTSAPDQDYDVCRAQNDSSGLGG*IAFQAI Trigger: AATGGCCTGGAAAGCGATCCAGCCGCCGAGTCCAGA...AGAATCATTCTGGGCTCTGCAGACATCATAGTCCTGGTCAGGTGCTGATGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR TCA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTCGCTTTCCAGGCCATTaGATGGACAGGACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTVNKGMQLIDDHRELPSRFPGH*MDRTSG Trigger: GCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCG...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR GCA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTCTGCTGACATTGAACTaGGGGCTGTTGGGGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTVNKGMQLIDDHRELPSLLTLN*GLLGEK Trigger: TTTCTCCCCCAACAGCCCGCAGTTCAATGTCAGCAG...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | TGTACATCAGCACCTGACCAGGACTATGATGTCTGCAGAGCCCAGAATGATTCTAAACTATTGTGTCTCTaGACTCGGCGGCTGGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: CTSAPDQDYDVCRAQNDSKLLCL*TRRLDR Trigger: GCGATCCAGCCGCCGAGTCCAGAGACACAATAGTTT...AGAATCATTCTGGGCTCTGCAGACATCATAGTCCTGGTCAGGTGCTGATGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGCTTATCACAGAGACCACAGTACGTCCCCTGTGCTGTAGGAGAGCTCTGGAGTCTGTTTATCTaGGTCATCCACTGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSLSQRPQYVPCAVGELWSLFI*VIHWLS Trigger: AGACAACCAGTGGATGACCCAGATAAACAGACTCCA...GAGCTCTCCTACAGCACAGGGGACGTACTGTGGTCTCTGTGATAAGCTCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| 3UTR CAA 72 bp | AAGTCTCAGCAGCCATCAGATAACTCCAGTGATGTCTaGTCTTGCACACCTGTGACAGAAGAGCTGCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSQQPSDNSSDV*SCTPVTEELRQ Trigger: TTGCCGCAGCTCTTCTGTCACAGGTGTGCAAGACAAGACATCACTGGAGTTATCTGATGGCTGCTGAGACTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CCA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTGACTTCTGGCTTGGATaGTCCTTGCCTTTCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: HTVNKGMQLIDDHRELPSDFWLG*SLPFLT Trigger: CGTCAAGAAAGGCAAGGACCATCCAAGCCAGAAGTC...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTTGGGGGTAGCATATATGCCCTTGGACAGTTaGAGGGTAGAGCTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRAVGFNVWVATSLGVAYMPLDS*RVELSS Trigger: AGAGCTCAGCTCTACCCTGCAACTGTCCAAGGGCAT...ATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTATGCCCTTGGACAGTTaGAGGGTAGAGCTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRKVLKGRSNQKVENTASMPLDS*RVELSS Trigger: AGAGCTCAGCTCTACCCTGCAACTGTCCAAGGGCAT...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTTGGGGGTAGCATATCTGCTGACATTGAACTaGGGGCTGTTGGGGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRAVGFNVWVATSLGVAYLLTLN*GLLGEK Trigger: TTTCTCCCCCAACAGCCCGCAGTTCAATGTCAGCAG...ATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTGAATGTCGAGGAAGATaGACATGCCCTTGGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTVNKGMQLIDDHRELPSECRGR*TCPWTV Trigger: AACTGTCCAAGGGCATGTCCATCTTCCTCGACATTC...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGCTTATCACAGAGACCACAGTACGTCCCCTGTGCTGTAGGAGAGCTCTATTGTGTGTGTCAATaGTGTGGAAGAGCTCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LQSLSQRPQYVPCAVGELYCVCQ*CGRAHV Trigger: TACATGAGCTCTTCCACACCATTGACACACACAATA...GAGCTCTCCTACAGCACAGGGGACGTACTGTGGTCTCTGTGATAAGCTCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CCA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTAAACTATTGTGTCTCTaGACTCGGCGGCTGGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: MRKVLKGRSNQKVENTASKLLCL*TRRLDR Trigger: GCGATCCAGCCGCCGAGTCCAGAGACACAATAGTTT...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTTGGGGGTAGCATATGCATCCACTTTGAGCTaGAGCACTCTCCACATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRAVGFNVWVATSLGVAYASTLS*STLHIV Trigger: CACTATGTGGAGAGTGCTTCAGCTCAAAGTGGATGC...ATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR GCA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTCCAAGAAATCCACGTTaGTTCTTTGGAACGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTVNKGMQLIDDHRELPSPRNPR*FFGTSC Trigger: GCAAGACGTTCCAAAGAAGCAACGTGGATTTCTTGG...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTTGGGGGTAGCATATAATGGACAGGACTTCTaGCTTGGATGGTCCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FRAVGFNVWVATSLGVAYNGQDF*LGWSLP Trigger: AGGCAAGGACCATCCAAGCCAGAAGTCCTGTCCATT...ATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTTCTGTCACAGACATCTaGCGCTGCACAAGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: MRKVLKGRSNQKVENTASSVTDI*RCTSMM Trigger: CATCATGCTTGTGCAGCGCCAGATGTCTGTGACAGA...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTTGCTTCAGAGCAAGCTaGAATTCTTCCAGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTVNKGMQLIDDHRELPSCFRAS*NSSRSS Trigger: AGAGGATCTGGAAGAATTCCAGCTTGCTCTGAAGCA...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR TCA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTGTAGTTCTTCTCCACTaGGAACTCCATCTGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTVNKGMQLIDDHRELPSVVLLH*ELHLQN Trigger: ATTTTGCAGATGGAGTTCTCAGTGGAGAAGAACTAC...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR TCA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTTGCACAAGCATGATGTaGGGTTTAGTGTTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTVNKGMQLIDDHRELPSCTSMM*GLVFSS Trigger: TGAAGAGAACACTAAACCTCACATCATGCTTGTGCA...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR TCA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTGTAGCGAGATTCGTTTaGGAGCTTCTGTATAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HTVNKGMQLIDDHRELPSVARFV*ELLYRD Trigger: ATCTCTATACAGAAGCTCTCAAACGAATCTCGCTAC...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGTCTGGACTCGGCGGCTaGATCGCTTTCCAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQSGLGG*IAFQAI Trigger: AATGGCCTGGAAAGCGATCCAGCCGCCGAGTCCAGA...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR TCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGCGCAGGCATCCACTTTaGGCTGAAGCACTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQRRHPL*AEALST Trigger: TGTGGAGAGTGCTTCAGCTCAAAGTGGATGCCTGCG...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR TCA 90 bp | TGTACATCAGCACCTGACCAGGACTATGATGTCTGCAGAGCCCAGAATGATTCTTATTCACCCAAGTGCTaGGAAAAATATTCGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CTSAPDQDYDVCRAQNDSYSPKC*EKYSHS Trigger: ACTATGCGAATATTTTTCTCAGCACTTGGGTGAATA...AGAATCATTCTGGGCTCTGCAGACATCATAGTCCTGGTCAGGTGCTGATGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR TCA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTTGCACAAGCATGATGTaGGGTTTAGTGTTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MRKVLKGRSNQKVENTASCTSMM*GLVFSS Trigger: TGAAGAGAACACTAAACCTCACATCATGCTTGTGCA...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGGGCGGTTCCACACACTaGTGTTCTCCCAGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQGGSTH*CSPRTH Trigger: ATGAGTTCTGGGAGAACAGCAGTGTGTGGAACCGCC...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| 3UTR CAA 72 bp | AGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTaGGGGGTAGCATATCAGATATTCTGCATATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RAVGFNVWVATS*GVAYQIFCISD Trigger: ATCTGATATGCAGAATATCTGATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| 3UTR CAA 72 bp | AATCAGTTTCAGCTTTGCAGGCAGTTCCTGCAAAAATaGGGAAATAACACTCGAAAGTGGGGATGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQFQLCRQFLQK*GNNTRKWGCCW Trigger: CCAACAACATCCCCACTTTCGAGTGTTATTTCCCAATTTTTGCAGGAACTGCCTGCAAAGCTGAAACTGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR GCA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTATCATCATTTTTGTCTaGTCTCCTCAGAATGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MRKVLKGRSNQKVENTASIIIFV*SPQNVE Trigger: CTCGACATTCTGAGGAGAGCAGACAAAAATGATGAT...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | TGTGATTGTGTGTGCTGCTCCTACTATTTTCATTTTAGTCATAGGATCCAGTATTTCCAGGCCATTGAATaGACAGGACTTCTGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CDCVCCSYYFHFSHRIQYFQAIE*TGLLAW Trigger: CCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAA...ATACTGGATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGTTCCAGGCCATTGAATaGACAGGACTTCTGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQFQAIE*TGLLAW Trigger: CCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAA...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTATCTGGGTCATCCACTaGTTGTCTTCTTCTAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: MRKVLKGRSNQKVENTASIWVIH*LSSSNN Trigger: ATTGTTAGAAGAAGACAACCAGTGGATGACCCAGAT...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGGAATGTCGAGGAAGATaGACATGCCCTTGGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQECRGR*TCPWTV Trigger: AACTGTCCAAGGGCATGTCCATCTTCCTCGACATTC...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | GTAAATATAAGCTCACTACTTTTATTCATTTGTGTCTTGGGATCACGAGAAGGTAATGGACAGGACTTCTaGCTTGGATGGTCCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VNISSLLLFICVLGSREGNGQDF*LGWSLP Trigger: AGGCAAGGACCATCCAAGCCAGAAGTCCTGTCCATT...ACCTTCTCGTGATCCCAAGACACAAATGAATAAAAGTAGTGAGCTTATATTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGCCATTGCCTTCAGGATaGAGAGATTCAGGTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQPLPSG*RDSGLQ Trigger: TTGAAGACCTGAATCTCTCCATCCTGAAGGCAATGG...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGTGGAGTCTGTTTATCTaGGTCATCCACTGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQWSLFI*VIHWLS Trigger: AGACAACCAGTGGATGACCCAGATAAACAGACTCCA...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGGGTAGATGTGAGCTCTaGAGTTTCCAAGAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQGRCEL*SFQEIH Trigger: GTGGATTTCTTGGAAACTCCAGAGCTCACATCTACC...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR GCA 90 bp | TGTGATTGTGTGTGCTGCTCCTACTATTTTCATTTTAGTCATAGGATCCAGTATATTCAGGTCTTCAAGTaGGGCCAGTACATTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: CDCVCCSYYFHFSHRIQYIQVFK*GQYILI Trigger: TATGAGAATGTACTGGCCGCACTTGAAGACCTGAAT...ATACTGGATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGTGTGTGTCAATGGTGTaGAAGAGCTCATGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQCVSMV*KSSCSS Trigger: AGAACTACATGAGCTCTTCCACACCATTGACACACA...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| 3UTR CAA 72 bp | GTAAATATAAGCTCACTACTTTTATTCATTTGTGTCTaGGGATCACGAGAAGGTCATTCAAGGCCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VNISSLLLFICV*GSREGHSRPQF Trigger: GAACTGTGGCCTTGAATGACCTTCTCGTGATCCCAAGACACAAATGAATAAAAGTAGTGAGCTTATATTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR TCA 90 bp | AACAACATTTATAAAACTAGGCACCACAGGAATAGAACACAGACTTGGAATACAGTAGCGAGATTCGTTTaGGAGCTTCTGTATAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NNIYKTRHHRNRTQTWNTVARFV*ELLYRD Trigger: ATCTCTATACAGAAGCTCTCAAACGAATCTCGCTAC...TGTATTCCAAGTCTGTGTTCTATTCCTGTGGTGCCTAGTTTTATAAATGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR GCA 90 bp | TGTGATTGTGTGTGCTGCTCCTACTATTTTCATTTTAGTCATAGGATCCAGTATATCATCATTTTTGTCTaGTCTCCTCAGAATGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CDCVCCSYYFHFSHRIQYIIIFV*SPQNVE Trigger: CTCGACATTCTGAGGAGAGCAGACAAAAATGATGAT...ATACTGGATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CCA 90 bp | AACAACATTTATAAAACTAGGCACCACAGGAATAGAACACAGACTTGGAATACATGTGTGTCAATGGTGTaGAAGAGCTCATGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NNIYKTRHHRNRTQTWNTCVSMV*KSSCSS Trigger: AGAACTACATGAGCTCTTCCACACCATTGACACACA...TGTATTCCAAGTCTGTGTTCTATTCCTGTGGTGCCTAGTTTTATAAATGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CCA 90 bp | TGTGATTGTGTGTGCTGCTCCTACTATTTTCATTTTAGTCATAGGATCCAGTATATCTGGGTCATCCACTaGTTGTCTTCTTCTAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CDCVCCSYYFHFSHRIQYIWVIH*LSSSNN Trigger: ATTGTTAGAAGAAGACAACCAGTGGATGACCCAGAT...ATACTGGATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| 3UTR CAA 72 bp | AAGGTAAGTAAATATAAGCTCACTACTTTTATTCATTaGTGTCTTGGGATCACGAGAAGGTCATTCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVSKYKLTTFIH*CLGITRRSFKA Trigger: GGCCTTGAATGACCTTCTCGTGATCCCAAGACACAAATGAATAAAAGTAGTGAGCTTATATTTACTTACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR TCA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGTATTCACCCAAGTGCTaGGAAAAATATTCGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: YQEQQFCRIHFKECANTQYSPKC*EKYSHS Trigger: ACTATGCGAATATTTTTCTCAGCACTTGGGTGAATA...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGACCACAGTACGTCCCCTGTGCTGTAGGAGAGCTCTGCTGTCCCCTTCCCTTGGGGGAGAAACTATaGTGTCTCTGGACTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QRPQYVPCAVGELCCPLPLGEKL*CLWTRR Trigger: CCGCCGAGTCCAGAGACACAATAGTTTCTCCCCCAA...GGGAAGGGGACAGCAGAGCTCTCCTACAGCACAGGGGACGTACTGTGGTCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS CCA 90 bp | GCGGGCTGTTGGGGGAGAAACTATTGTGTCTCTGGACTCGGCGGCTaGATCGCTTTCCAGGCCATTGAATGGACAGGACTTCTGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGCWGRNYCVSGLGG*IAFQAIEWTGLLAW Trigger: CCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCGATCCAGCCGCCGAGTCCAGAGACACAATAGTTTCTCCCCCAACAGCCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS CCA 90 bp | TGTGTCTCTGGACTCGGCGGCTGGATCGCTTTCCAGGCCATTGAATaGACAGGACTTCTGGCTTGGATGGTCCTTGCCTTTCTTGACGCG | + |
|
Preference number: 5 (lower is better) Translates to: CVSGLGGWIAFQAIE*TGLLAWMVLAFLDA Trigger: CGCGTCAAGAAAGGCAAGGACCATCCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCGATCCAGCCGCCGAGTCCAGAGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS GCA 90 bp | GCTCTCCTCAGAATGTCGAGGAAGATGGACATGCCCTTGGACAGTTaGAGGGTAGAGCTGAGCTCTTCCGAGGAGTTGTTGGAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLRMSRKMDMPLDS*RVELSSSEELLEEG Trigger: GCCTTCCTCCAACAACTCCTCGGAAGAGCTCAGCTCTACCCTGCAACTGTCCAAGGGCATGTCCATCTTCCTCGACATTCTGAGGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTGCACACCTGTGACAGAAGAGCTGCGGCAAGCTCTGCTTCATACTGCTTGTCGCTTTCCAGGCCATaGAATGGACAGGACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLHTCDRRAAASSASYCLSLSRP*NGQDFW Trigger: CCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCGA...CAAGCAGTATGAAGCAGAGCTTGCCGCAGCTCTTCTGTCACAGGTGTGCAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CAA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTCATGCCCTTGGACAGTaGCAGGGTAGAGCTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTVNKGMQLIDDHRELPSHALGQ*QGRAEL Trigger: GAGCTCAGCTCTACCCTGCAACTGTCCAAGGGCATG...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS GCA 90 bp | GCTCTGGAGTTTCCAAGAAATCCACGTTGCTTCTTTGGAACGTCTTaGTGTAATTCGTCTGGAGGTGGCGGTTCCACACACTGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALEFPRNPRCFFGTS*CNSSGGGGSTHCCS Trigger: AGAACAGCAGTGTGTGGAACCGCCACCTCCAGACGAATTACAGCAAGACGTTCCAAAGAAGCAACGTGGATTTCTTGGAAACTCCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS GCA 90 bp | GGAACGTCTTGCTGTAATTCGTCTGGAGGTGGCGGTTCCACACACTaGTGTTCTCCCAGAACTCATAAATCATGTAGCGAGATTCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTSCCNSSGGGGSTH*CSPRTHKSCSEIRL Trigger: CAAACGAATCTCGCTACATGATTTATGAGTTCTGGGAGAACAGCAGTGTGTGGAACCGCCACCTCCAGACGAATTACAGCAAGACGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTTGGGGGTAGCATATTCTTCCGAGGAGTTGTaGGAGGAAGGCGAAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FRAVGFNVWVATSLGVAYSSEEL*EEGEVS Trigger: GGAGACTTCGCCTTCCTCCAACAACTCCTCGGAAGA...ATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTTTGGGGGAGAAACTATaGTGTCTCTGGACTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: MRKVLKGRSNQKVENTASLGEKL*CLWTRR Trigger: CCGCCGAGTCCAGAGACACAATAGTTTCTCCCCCAA...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTTCTTTGTCTTGCCCATaGCCTTCAGGATGGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HTVNKGMQLIDDHRELPSSLSCP*PSGWRD Trigger: ATCTCTCCATCCTGAAGGCAATGGGCAAGACAAAGA...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TGTACATCAGCACCTGACCAGGACTATGATGTCTGCAGAGCCCAGAATGATTCTTCGAGATTGTTGGTATaGTGTGTGTCAATGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CTSAPDQDYDVCRAQNDSSRLLV*CVSMVW Trigger: CCACACCATTGACACACACAATACCAACAATCTCGA...AGAATCATTCTGGGCTCTGCAGACATCATAGTCCTGGTCAGGTGCTGATGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CAA 90 bp | TGTACATCAGCACCTGACCAGGACTATGATGTCTGCAGAGCCCAGAATGATTCTCCTTTCTTGACGCGTTaGCTCTTCAGTAGTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CTSAPDQDYDVCRAQNDSPFLTR*LFSSFH Trigger: ATGGAAACTACTGAAGAGCAAACGCGTCAAGAAAGG...AGAATCATTCTGGGCTCTGCAGACATCATAGTCCTGGTCAGGTGCTGATGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CAA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTCCTTTCTTGACGCGTTaGCTCTTCAGTAGTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HTVNKGMQLIDDHRELPSPFLTR*LFSSFH Trigger: ATGGAAACTACTGAAGAGCAAACGCGTCAAGAAAGG...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TGTACATCAGCACCTGACCAGGACTATGATGTCTGCAGAGCCCAGAATGATTCTTCCAAGAAATCCACGTaGCTTCTTTGGAACGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTSAPDQDYDVCRAQNDSSKKST*LLWNVL Trigger: CAAGACGTTCCAAAGAAGCAACGTGGATTTCTTGGA...AGAATCATTCTGGGCTCTGCAGACATCATAGTCCTGGTCAGGTGCTGATGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS GCA 90 bp | TGTCTTGCCCATTGCCTTCAGGATGGAGAGATTCAGGTCTTCAAGTaGGGCCAGTACATTCTCATATTCACCCAAGTGCTGAGAAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: CLAHCLQDGEIQVFK*GQYILIFTQVLRKI Trigger: TATTTTTCTCAGCACTTGGGTGAATATGAGAATGTACTGGCCGCACTTGAAGACCTGAATCTCTCCATCCTGAAGGCAATGGGCAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTTCTTTGTCTTGCCCATaGCCTTCAGGATGGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: MRKVLKGRSNQKVENTASSLSCP*PSGWRD Trigger: ATCTCTCCATCCTGAAGGCAATGGGCAAGACAAAGA...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS CCA 90 bp | AGTTCTTCTGTGTCGAGATTGTTGGTATTGTGTGTGTCAATGGTGTaGAAGAGCTCATGTAGTTCTTCTCCACTGAGAACTCCATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSVSRLLVLCVSMV*KSSCSSSPLRTPSA Trigger: TGCAGATGGAGTTCTCAGTGGAGAAGAACTACATGAGCTCTTCCACACCATTGACACACACAATACCAACAATCTCGACACAGAAGAACT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS CCA 90 bp | AAGCTTCTTGGTAGTCTTTCTTTGTCTTGCCCATTGCCTTCAGGATaGAGAGATTCAGGTCTTCAAGTGCGGCCAGTACATTCTCATATT | + |
|
Preference number: 5 (lower is better) Translates to: KLLGSLSLSCPLPSG*RDSGLQVRPVHSHI Trigger: AATATGAGAATGTACTGGCCGCACTTGAAGACCTGAATCTCTCCATCCTGAAGGCAATGGGCAAGACAAAGAAAGACTACCAAGAAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TGTGATTGTGTGTGCTGCTCCTACTATTTTCATTTTAGTCATAGGATCCAGTATTCTTCCGAGGAGTTGTaGGAGGAAGGCGAAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CDCVCCSYYFHFSHRIQYSSEEL*EEGEVS Trigger: GGAGACTTCGCCTTCCTCCAACAACTCCTCGGAAGA...ATACTGGATCCTATGACTAAAATGAAAATAGTAGGAGCAGCACACACAATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CAA 90 bp | AACAACATTTATAAAACTAGGCACCACAGGAATAGAACACAGACTTGGAATACACATGCCCTTGGACAGTaGCAGGGTAGAGCTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NNIYKTRHHRNRTQTWNTHALGQ*QGRAEL Trigger: GAGCTCAGCTCTACCCTGCAACTGTCCAAGGGCATG...TGTATTCCAAGTCTGTGTTCTATTCCTGTGGTGCCTAGTTTTATAAATGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CAA 90 bp | CACACAGTGAACAAAGGTATGCAGCTGATTGACGACCACAGAGAACTTCCCAGTTTTCCATCATCATTTTaGTCTGCTCTCCTCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: HTVNKGMQLIDDHRELPSFPSSF*SALLRM Trigger: CATTCTGAGGAGAGCAGACAAAAATGATGATGGAAA...ACTGGGAAGTTCTCTGTGGTCGTCAATCAGCTGCATACCTTTGTTCACTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTTGGGGGTAGCATATTCGAGATTGTTGGTATaGTGTGTGTCAATGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FRAVGFNVWVATSLGVAYSRLLV*CVSMVW Trigger: CCACACCATTGACACACACAATACCAACAATCTCGA...ATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTTGGGTCATCCACTGGTaGTCTTCTTCTAACAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: MRKVLKGRSNQKVENTASWVIHW*SSSNNA Trigger: AGCATTGTTAGAAGAAGACAACCAGTGGATGACCCA...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTTGGGGGTAGCATATTCCAAGAAATCCACGTaGCTTCTTTGGAACGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FRAVGFNVWVATSLGVAYSKKST*LLWNVL Trigger: CAAGACGTTCCAAAGAAGCAACGTGGATTTCTTGGA...ATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS TCA 90 bp | GTAGTTTCCATGGCACATTCCAGAGAGTTCTGGAGAGACTGCAACTaGTTCAAGGTCTCCTTCAACAAAAATCGAGTGACAAATTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVSMAHSREFWRDCN*FKVSFNKNRVTNCS Trigger: GGAACAATTTGTCACTCGATTTTTGTTGAAGGAGACCTTGAATCAGTTGCAGTCTCTCCAGAACTCTCTGGAATGTGCCATGGAAACTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGGAAAGTATTAAAGGGTCGCAGCAATCAGAAGGTTGAGAACACTGCCAGTTCTTCTGTGTCGAGATaGTTGGTATTGTGTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MRKVLKGRSNQKVENTASSSVSR*LVLCVS Trigger: TGACACACACAATACCAACAATCTCGACACAGAAGA...ACTGGCAGTGTTCTCAACCTTCTGATTGCTGCGACCCTTTAATACTTTCCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGTCGCTTTCCAGGCCATaGAATGGACAGGACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YQEQQFCRIHFKECANTQSLSRP*NGQDFW Trigger: CCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCGA...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS TCA 90 bp | AGGTCTTCAAGTGCGGCCAGTACATTCTCATATTCACCCAAGTGCTaGGAAAAATATTCGCATAGTTCTTCTGTGTCGAGATTGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RSSSAASTFSYSPKC*EKYSHSSSVSRLLV Trigger: TACCAACAATCTCGACACAGAAGAACTATGCGAATATTTTTCTCAGCACTTGGGTGAATATGAGAATGTACTGGCCGCACTTGAAGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS CCA 90 bp | AGTCTATCAATTAATTTCTGGAGTCTGTTTATCTGGGTCATCCACTaGTTGTCTTCTTCTAACAATGCTGGACTGCTGACATTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSINFWSLFIWVIH*LSSSNNAGLLTLNC Trigger: GCAGTTCAATGTCAGCAGTCCAGCATTGTTAGAAGAAGACAACCAGTGGATGACCCAGATAAACAGACTCCAGAAATTAATTGATAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS CCA 90 bp | TCCTTCTTTTCCAGTCTATCAATTAATTTCTGGAGTCTGTTTATCTaGGTCATCCACTGGTTGTCTTCTTCTAACAATGCTGGACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFFSSLSINFWSLFI*VIHWLSSSNNAGLL Trigger: CAGCAGTCCAGCATTGTTAGAAGAAGACAACCAGTGGATGACCCAGATAAACAGACTCCAGAAATTAATTGATAGACTGGAAAAGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGAGCAGTGGGTTTCAATGTGTGGGTTGCAACTTCTTTGGGGGTAGCATATAAATCGAGTGACAAATaGTTCCAAATTGGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRAVGFNVWVATSLGVAYKSSDK*FQIGSF Trigger: GAAGCTTCCAATTTGGAACAATTTGTCACTCGATTT...ATATGCTACCCCCAAAGAAGTTGCAACCCACACATTGAAACCCACTGCTCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS TCA 90 bp | GGAGAGACTGCAACTGATTCAAGGTCTCCTTCAACAAAAATCGAGTaGCAAATTGTTCCAAATTGGAAGCTTCTTGGTAGTCTTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GETATDSRSPSTKIE*QIVPNWKLLGSLSL Trigger: CAAAGAAAGACTACCAAGAAGCTTCCAATTTGGAACAATTTGTCACTCGATTTTTGTTGAAGGAGACCTTGAATCAGTTGCAGTCTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGCTTGGTAGTCTTTCTTaGTCTTGCCCATTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YQEQQFCRIHFKECANTQLGSLS*SCPLPS Trigger: TGAAGGCAATGGGCAAGACAAAGAAAGACTACCAAG...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS CCA 90 bp | GGTTCAAGTTTCAGATCCTTCTTTTCCAGTCTATCAATTAATTTCTaGAGTCTGTTTATCTGGGTCATCCACTGGTTGTCTTCTTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GSSFRSFFSSLSINF*SLFIWVIHWLSSSN Trigger: GTTAGAAGAAGACAACCAGTGGATGACCCAGATAAACAGACTCCAGAAATTAATTGATAGACTGGAAAAGAAGGATCTGAAACTTGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGTCTTCTGTGTCGAGATaGTTGGTATTGTGTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YQEQQFCRIHFKECANTQSSVSR*LVLCVS Trigger: TGACACACACAATACCAACAATCTCGACACAGAAGA...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | GTAAATATAAGCTCACTACTTTTATTCATTTGTGTCTTGGGATCACGAGAAGGTCTTGGTAGTCTTTCTTaGTCTTGCCCATTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VNISSLLLFICVLGSREGLGSLS*SCPLPS Trigger: TGAAGGCAATGGGCAAGACAAAGAAAGACTACCAAG...ACCTTCTCGTGATCCCAAGACACAAATGAATAAAAGTAGTGAGCTTATATTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CAA 90 bp | GTAAATATAAGCTCACTACTTTTATTCATTTGTGTCTTGGGATCACGAGAAGGTTGGGTCATCCACTGGTaGTCTTCTTCTAACAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VNISSLLLFICVLGSREGWVIHW*SSSNNA Trigger: AGCATTGTTAGAAGAAGACAACCAGTGGATGACCCA...ACCTTCTCGTGATCCCAAGACACAAATGAATAAAAGTAGTGAGCTTATATTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS-3UTR CAA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGCAAATTGGAAGCTTCTaGGTAGTCTTTCTTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YQEQQFCRIHFKECANTQQIGSF*VVFLCL Trigger: AAGACAAAGAAAGACTACCAAGAAGCTTCCAATTTG...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | TATCAAGAGCAACAATTTTGCAGAATACACTTTAAAGAGTGTGCCAACACACAGAAATCGAGTGACAAATaGTTCCAAATTGGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YQEQQFCRIHFKECANTQKSSDK*FQIGSF Trigger: GAAGCTTCCAATTTGGAACAATTTGTCACTCGATTT...CTGTGTGTTGGCACACTCTTTAAAGTGTATTCTGCAAAATTGTTGCTCTTGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS-3UTR CAA 90 bp | GTAAATATAAGCTCACTACTTTTATTCATTTGTGTCTTGGGATCACGAGAAGGTCAAATTGGAAGCTTCTaGGTAGTCTTTCTTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VNISSLLLFICVLGSREGQIGSF*VVFLCL Trigger: AAGACAAAGAAAGACTACCAAGAAGCTTCCAATTTG...ACCTTCTCGTGATCCCAAGACACAAATGAATAAAAGTAGTGAGCTTATATTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041606.14 |
||
| CDS TCA 72 bp | CTCTGGACTCGGCGGCTGGATCGCTTTCCAGGCCATTaGATGGACAGGACTTCTGGCTTGGATGGTCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LWTRRLDRFPGH*MDRTSGLDGPC Trigger: GCAAGGACCATCCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCGATCCAGCCGCCGAGTCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
||
| CDS CAA 72 bp | GACAGTTGCAGGGTAGAGCTGAGCTCTTCCGAGGAGTaGTTGGAGGAAGGCGAAGTCTCCCGGGAATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSCRVELSSSEE*LEEGEVSRESS Trigger: GGAGGATTCCCGGGAGACTTCGCCTTCCTCCAACAACTCCTCGGAAGAGCTCAGCTCTACCCTGCAACTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CCA 72 bp | GGACTCGGCGGCTGGATCGCTTTCCAGGCCATTGAATaGACAGGACTTCTGGCTTGGATGGTCCTTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GLGGWIAFQAIE*TGLLAWMVLAF Trigger: AAAGGCAAGGACCATCCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCGATCCAGCCGCCGAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | TCTCTGGACTCGGCGGCTGGATCGCTTTCCAGGCCATaGAATGGACAGGACTTCTGGCTTGGATGGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLDSAAGSLSRP*NGQDFWLGWSL Trigger: CAAGGACCATCCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCGATCCAGCCGCCGAGTCCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | GCTCTCCTCAGAATGTCGAGGAAGATGGACATGCCCTaGGACAGTTGCAGGGTAGAGCTGAGCTCTTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: ALLRMSRKMDMP*DSCRVELSSSE Trigger: CTCGGAAGAGCTCAGCTCTACCCTGCAACTGTCCAAGGGCATGTCCATCTTCCTCGACATTCTGAGGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | CTGACATTGAACTGCGGGCTGTTGGGGGAGAAACTATaGTGTCTCTGGACTCGGCGGCTGGATCGCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LTLNCGLLGEKL*CLWTRRLDRFP Trigger: TGGAAAGCGATCCAGCCGCCGAGTCCAGAGACACAATAGTTTCTCCCCCAACAGCCCGCAGTTCAATGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 90 bp | TGCTCTCCTCAGAATGTCGAGGAAGATGGACATGCCCTTGGACAGTaGCAGGGTAGAGCTGAGCTCTTCCGAGGAGTTGTTGGAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: CSPQNVEEDGHALGQ*QGRAELFRGVVGGR Trigger: CCTTCCTCCAACAACTCCTCGGAAGAGCTCAGCTCTACCCTGCAACTGTCCAAGGGCATGTCCATCTTCCTCGACATTCTGAGGAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CCA 72 bp | TGGGGGAGAAACTATTGTGTCTCTGGACTCGGCGGCTaGATCGCTTTCCAGGCCATTGAATGGACAGGACTT | + |
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Preference number: 6 (lower is better) Translates to: WGRNYCVSGLGG*IAFQAIEWTGL Trigger: AAGTCCTGTCCATTCAATGGCCTGGAAAGCGATCCAGCCGCCGAGTCCAGAGACACAATAGTTTCTCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | AACAATGCTGGACTGCTGACATTGAACTGCGGGCTGTaGGGGGAGAAACTATTGTGTCTCTGGACTCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: NNAGLLTLNCGL*GEKLLCLWTRR Trigger: CCGCCGAGTCCAGAGACACAATAGTTTCTCCCCCAACAGCCCGCAGTTCAATGTCAGCAGTCCAGCATTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 90 bp | ACTATTGTGTCTCTGGACTCGGCGGCTGGATCGCTTTCCAGGCCATaGAATGGACAGGACTTCTGGCTTGGATGGTCCTTGCCTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TIVSLDSAAGSLSRP*NGQDFWLGWSLPFL Trigger: CAAGAAAGGCAAGGACCATCCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCGATCCAGCCGCCGAGTCCAGAGACACAATAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 90 bp | TCTTCTTCTAACAATGCTGGACTGCTGACATTGAACTGCGGGCTGTaGGGGGAGAAACTATTGTGTCTCTGGACTCGGCGGCTGGATCGC | + |
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Preference number: 6 (lower is better) Translates to: SSSNNAGLLTLNCGL*GEKLLCLWTRRLDR Trigger: GCGATCCAGCCGCCGAGTCCAGAGACACAATAGTTTCTCCCCCAACAGCCCGCAGTTCAATGTCAGCAGTCCAGCATTGTTAGAAGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS GCA 72 bp | AGAATGTCGAGGAAGATGGACATGCCCTTGGACAGTTaGAGGGTAGAGCTGAGCTCTTCCGAGGAGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: RMSRKMDMPLDS*RVELSSSEELL Trigger: CAACAACTCCTCGGAAGAGCTCAGCTCTACCCTGCAACTGTCCAAGGGCATGTCCATCTTCCTCGACATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CCA 72 bp | GGATCGCTTTCCAGGCCATTGAATGGACAGGACTTCTaGCTTGGATGGTCCTTGCCTTTCTTGACGCGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GSLSRPLNGQDF*LGWSLPFLTRL Trigger: CAAACGCGTCAAGAAAGGCAAGGACCATCCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGCGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | CAGAATGTCGAGGAAGATGGACATGCCCTTGGACAGTaGCAGGGTAGAGCTGAGCTCTTCCGAGGAGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: QNVEEDGHALGQ*QGRAELFRGVV Trigger: AACAACTCCTCGGAAGAGCTCAGCTCTACCCTGCAACTGTCCAAGGGCATGTCCATCTTCCTCGACATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CCA 72 bp | GCTTTCCAGGCCATTGAATGGACAGGACTTCTGGCTTaGATGGTCCTTGCCTTTCTTGACGCGTTTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: AFQAIEWTGLLA*MVLAFLDAFAL Trigger: AAGAGCAAACGCGTCAAGAAAGGCAAGGACCATCCAAGCCAGAAGTCCTGTCCATTCAATGGCCTGGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 90 bp | GGTAGATGTGAGCTCTGGAGTTTCCAAGAAATCCACGTTGCTTCTTaGGAACGTCTTGCTGTAATTCGTCTGGAGGTGGCGGTTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: GRCELWSFQEIHVAS*ERLAVIRLEVAVPH Trigger: GTGTGGAACCGCCACCTCCAGACGAATTACAGCAAGACGTTCCAAAGAAGCAACGTGGATTTCTTGGAAACTCCAGAGCTCACATCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS GCA 72 bp | TGCTGTAATTCGTCTGGAGGTGGCGGTTCCACACACTaGTGTTCTCCCAGAACTCATAAATCATGTAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: CCNSSGGGGSTH*CSPRTHKSCSE Trigger: CTCGCTACATGATTTATGAGTTCTGGGAGAACAGCAGTGTGTGGAACCGCCACCTCCAGACGAATTACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | GAGCTCTGGAGTTTCCAAGAAATCCACGTTGCTTCTTaGGAACGTCTTGCTGTAATTCGTCTGGAGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: ELWSFQEIHVAS*ERLAVIRLEVA Trigger: CGCCACCTCCAGACGAATTACAGCAAGACGTTCCAAAGAAGCAACGTGGATTTCTTGGAAACTCCAGAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS TCA 72 bp | CTTCTGTATAGAGATACGCAGGCATCCACTTTGAGCTaGAGCACTCTCCACATAGTGCTTCAGAGCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLYRDTQASTLS*STLHIVLQSKL Trigger: CAGCTTGCTCTGAAGCACTATGTGGAGAGTGCTTCAGCTCAAAGTGGATGCCTGCGTATCTCTATACAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS GCA 72 bp | CATTGCCTTCAGGATGGAGAGATTCAGGTCTTCAAGTaGGGCCAGTACATTCTCATATTCACCCAAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HCLQDGEIQVFK*GQYILIFTQVL Trigger: CAGCACTTGGGTGAATATGAGAATGTACTGGCCGCACTTGAAGACCTGAATCTCTCCATCCTGAAGGCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS GCA 72 bp | TCTTCTTCTAACAATGCTGGACTGCTGACATTGAACTaGGGGCTGTTGGGGGAGAAACTATTGTGTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSNNAGLLTLN*GLLGEKLLCLW Trigger: CCAGAGACACAATAGTTTCTCCCCCAACAGCCCGCAGTTCAATGTCAGCAGTCCAGCATTGTTAGAAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS GCA 72 bp | TTTCCAAGAAATCCACGTTGCTTCTTTGGAACGTCTTaGTGTAATTCGTCTGGAGGTGGCGGTTCCACACAC | + |
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Preference number: 6 (lower is better) Translates to: FPRNPRCFFGTS*CNSSGGGGSTH Trigger: GTGTGTGGAACCGCCACCTCCAGACGAATTACAGCAAGACGTTCCAAAGAAGCAACGTGGATTTCTTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | TGGTTGTCTTCTTCTAACAATGCTGGACTGCTGACATaGAACTGCGGGCTGTTGGGGGAGAAACTATTGTGT | + |
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Preference number: 6 (lower is better) Translates to: WLSSSNNAGLLT*NCGLLGEKLLC Trigger: ACACAATAGTTTCTCCCCCAACAGCCCGCAGTTCAATGTCAGCAGTCCAGCATTGTTAGAAGAAGACAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS TCA 72 bp | ATGGCACATTCCAGAGAGTTCTGGAGAGACTGCAACTaGTTCAAGGTCTCCTTCAACAAAAATCGAGTGACA | + |
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Preference number: 6 (lower is better) Translates to: MAHSREFWRDCN*FKVSFNKNRVT Trigger: TGTCACTCGATTTTTGTTGAAGGAGACCTTGAATCAGTTGCAGTCTCTCCAGAACTCTCTGGAATGTGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS TCA 72 bp | CTCCCAGAACTCATAAATCATGTAGCGAGATTCGTTTaGGAGCTTCTGTATAGAGATACGCAGGCATCCACT | + |
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Preference number: 6 (lower is better) Translates to: LPELINHVARFV*ELLYRDTQAST Trigger: AGTGGATGCCTGCGTATCTCTATACAGAAGCTCTCAAACGAATCTCGCTACATGATTTATGAGTTCTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CCA 72 bp | GTGTCGAGATTGTTGGTATTGTGTGTGTCAATGGTGTaGAAGAGCTCATGTAGTTCTTCTCCACTGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: VSRLLVLCVSMV*KSSCSSSPLRT Trigger: AGTTCTCAGTGGAGAAGAACTACATGAGCTCTTCCACACCATTGACACACACAATACCAACAATCTCGACAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 90 bp | CTATCAATTAATTTCTGGAGTCTGTTTATCTGGGTCATCCACTGGTaGTCTTCTTCTAACAATGCTGGACTGCTGACATTGAACTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LSINFWSLFIWVIHW*SSSNNAGLLTLNCG Trigger: CCCGCAGTTCAATGTCAGCAGTCCAGCATTGTTAGAAGAAGACAACCAGTGGATGACCCAGATAAACAGACTCCAGAAATTAATTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS TCA 72 bp | AGTGCGGCCAGTACATTCTCATATTCACCCAAGTGCTaGGAAAAATATTCGCATAGTTCTTCTGTGTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: SAASTFSYSPKC*EKYSHSSSVSR Trigger: TCTCGACACAGAAGAACTATGCGAATATTTTTCTCAGCACTTGGGTGAATATGAGAATGTACTGGCCGCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | AATTTCTGGAGTCTGTTTATCTGGGTCATCCACTGGTaGTCTTCTTCTAACAATGCTGGACTGCTGACATTG | + |
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Preference number: 6 (lower is better) Translates to: NFWSLFIWVIHW*SSSNNAGLLTL Trigger: CAATGTCAGCAGTCCAGCATTGTTAGAAGAAGACAACCAGTGGATGACCCAGATAAACAGACTCCAGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CCA 72 bp | ATTAATTTCTGGAGTCTGTTTATCTGGGTCATCCACTaGTTGTCTTCTTCTAACAATGCTGGACTGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: INFWSLFIWVIH*LSSSNNAGLLT Trigger: TGTCAGCAGTCCAGCATTGTTAGAAGAAGACAACCAGTGGATGACCCAGATAAACAGACTCCAGAAATTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | TATTCGCATAGTTCTTCTGTGTCGAGATTGTTGGTATaGTGTGTGTCAATGGTGTGGAAGAGCTCATGTAGT | + |
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Preference number: 6 (lower is better) Translates to: YSHSSSVSRLLV*CVSMVWKSSCS Trigger: ACTACATGAGCTCTTCCACACCATTGACACACACAATACCAACAATCTCGACACAGAAGAACTATGCGAATA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 90 bp | CTGCAACTGATTCAAGGTCTCCTTCAACAAAAATCGAGTGACAAATaGTTCCAAATTGGAAGCTTCTTGGTAGTCTTTCTTTGTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LQLIQGLLQQKSSDK*FQIGSFLVVFLCLA Trigger: GGCAAGACAAAGAAAGACTACCAAGAAGCTTCCAATTTGGAACAATTTGTCACTCGATTTTTGTTGAAGGAGACCTTGAATCAGTTGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CCA 72 bp | TCCAGTCTATCAATTAATTTCTGGAGTCTGTTTATCTaGGTCATCCACTGGTTGTCTTCTTCTAACAATGCT | + |
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Preference number: 6 (lower is better) Translates to: SSLSINFWSLFI*VIHWLSSSNNA Trigger: AGCATTGTTAGAAGAAGACAACCAGTGGATGACCCAGATAAACAGACTCCAGAAATTAATTGATAGACTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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| CDS CAA 72 bp | ATTCAAGGTCTCCTTCAACAAAAATCGAGTGACAAATaGTTCCAAATTGGAAGCTTCTTGGTAGTCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: IQGLLQQKSSDK*FQIGSFLVVFL Trigger: AAGAAAGACTACCAAGAAGCTTCCAATTTGGAACAATTTGTCACTCGATTTTTGTTGAAGGAGACCTTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041606.14 ENSMUST00000108273.2 |
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