RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NEB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026950

Ensembl transcript IDs: ENSMUST00000028320.14, ENSMUST00000036934.12, ENSMUST00000075301.10, ENSMUST00000135200.2, ENSMUST00000139672.2, ENSMUST00000148356.3, ENSMUST00000209712.2, ENSMUST00000210179.2, ENSMUST00000238288.2, ENSMUST00000238749.2

Found 2382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TACATGGAGAGTAACCATGGTTTCTATAGAAGAGATTGTAACACATaGAATGATATTGCTACAGGTGAAAACATGAGAGAGCTTGAAAGC +
Preference number: 1 (lower is better)
Translates to: YMESNHGFYRRDCNT*NDIATGENMRELES
Trigger: GCTTTCAAGCTCTCTCATGTTTTCACCTGTAGCAATATCATTTCATGTGTTACAATCTCTTCTATAGAAACCATGGTTACTCTCCATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTACAGGTGAAAACATaGGAGAGCTTGAAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: LSQHLILTVHSYRNETQALQVKT*ESLKAL
Trigger: CAGGGCTTTCAAGCTCTCTCATGTTTTCACCTGTAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTACAGGTGAAAACATaGGAGAGCTTGAAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILQVKT*ESLKAL
Trigger: CAGGGCTTTCAAGCTCTCTCATGTTTTCACCTGTAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGAGTTGCAGATACTaGAGACTGATGGAGGTCTTG +
Preference number: 2 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQSCRY*RLMEVL
Trigger: CAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTTGCCTGCAGAGTTaGAGATACTGCAGACTGATG +
Preference number: 2 (lower is better)
Translates to: LSQHLILTVHSYRNETQACCLQS*RYCRLM
Trigger: CATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTCCACTGAAATGTTaGCTGCAGAGTTGCAGATAC +
Preference number: 2 (lower is better)
Translates to: LSQHLILTVHSYRNETQASPLKC*LQSCRY
Trigger: GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCTCCACTGAAATGTTaGCTGCAGAGTTGCAGATAC +
Preference number: 2 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISPLKC*LQSCRY
Trigger: GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATAATTGGGAAGGACTaGTTTGGTTACATAACACTA +
Preference number: 2 (lower is better)
Translates to: LSQHLILTVHSYRNETQAIIGKD*FGYITL
Trigger: TAGTGTTATGTAACCAAACCAGTCCTTCCCAATTAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR GCA 72 bp GAAAGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTaGCTGCAGAGTTGCAGATACTGCAGACTGATGGAG +
Preference number: 3 (lower is better)
Translates to: ESPGVLKSPLKC*LQSCRYCRLME
Trigger: CTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR GCA 72 bp GTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTaGAGATACTGCAGACTGATGGAGGTCTTGAAGTGC +
Preference number: 3 (lower is better)
Translates to: VLKSPLKCCLQS*RYCRLMEVLKC
Trigger: GCACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTCTCCACTGAAATGTaGCCTGCAGAGTTGCAGATA +
Preference number: 3 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVSTEM*PAELQI
Trigger: TATCTGCAACTCTGCAGGCAACATTTCAGTGGAGAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCACTGGCAGATCTTaGCTGGTCCCGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCTGRS*LVPAPA
Trigger: CGCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGCACTGGCAGATCTTaGCTGGTCCCGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCTGRS*LVPAPA
Trigger: CGCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATCCGGGCAGCCTCCTaGGCAGTGTGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIRAAS*AVCSSG
Trigger: CCCACTGCTGCACACTGCCCAGGAGGCTGCCCGGAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATCCGGGCAGCCTCCTaGGCAGTGTGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIRAAS*AVCSSG
Trigger: CCCACTGCTGCACACTGCCCAGGAGGCTGCCCGGAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCTCCTCGCCCCCACTaGTACTCAGTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSPRPH*YSVHWQ
Trigger: CTGCCAGTGCACTGAGTATCAGTGGGGGCGAGGAGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTCATCTTGCAGGCTaGGGAAACCCACGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGHLAG*GNPRGG
Trigger: GCCACCACGTGGGTTTCCGCAGCCTGCAAGATGACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGCCATAGGCCTTGGTaGCCTCCCAGGCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSHRPW*PPRLPC
Trigger: ACAAGGGAGCCTGGGAGGGCACCAAGGCCTATGGCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTCCAGCGAGCCGATaGGGATCCACCCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLPASR*GSTQCP
Trigger: AGGGCATTGGGTGGATCCCCATCGGCTCGCTGGAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTAGCCATAGGCCTTaGTGCCCTCCCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCSHRP*CPPRLP
Trigger: AGGGAGCCTGGGAGGGCACCAAGGCCTATGGCTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGATGACTTGGCCGCCTaGATGAAGTCTGGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDDLAA*MKSGRS
Trigger: CGACCGCCCAGACTTCATCCAGGCGGCCAAGTCATC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCGTCCTGGAGGCTTCTaGAGCCAACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRPGGF*SQRAFP
Trigger: AGGGAAAGCACGTTGGCTTCAGAAGCCTCCAGGACG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACATCCTTGGCTGCTGTaGCGCTCAGCATGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGHPWLL*RSACRQ
Trigger: CTGCCGACATGCTGAGCGTCACAGCAGCCAAGGATG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCATCCTTGGCTGCTGTaGCGCTCAGCATGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHPWLL*RSACRQ
Trigger: CTGCCGACATGCTGAGCGTCACAGCAGCCAAGGATG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTTCTGGGTCTCCTTaGCGCGTTTCACTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYASGSP*RVSLRA
Trigger: TGCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTCCTCGCCCCCACTaGTACTCAGTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSPRPH*YSVHWQ
Trigger: CTGCCAGTGCACTGAGTATCAGTGGGGGCGAGGAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTCCTCGCCCCCACTaGTACTCAGTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSPRPH*YSVHWQ
Trigger: CTGCCAGTGCACTGAGTATCAGTGGGGGCGAGGAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTCGACGATGCTGGTaGATTTGTAGGCCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCRRCW*ICRPRA
Trigger: GGCCCGAGGCCTACAAATTCACCAGCATCGTCGACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCTCCATCTCTGGAGTaGCAGGTAAGGGGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSPSLE*QVRGSP
Trigger: AGGGGACCCCCTTACCTGTCACTCCAGAGATGGAGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTCGTCTTCCAGGCTaGGGAAGCCAATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGRLPG*GSQCAS
Trigger: GGAAGCACATTGGCTTCCGCAGCCTGGAAGACGACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCATCTTGCAGGCTaGGGAAACCCACGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGHLAG*GNPRGG
Trigger: GCCACCACGTGGGTTTCCGCAGCCTGCAAGATGACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTCATCTTGCAGGCTaGGGAAACCCACGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGHLAG*GNPRGG
Trigger: GCCACCACGTGGGTTTCCGCAGCCTGCAAGATGACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGCCATAGGCCTTGGTaGCCTCCCAGGCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSHRPW*PPRLPC
Trigger: ACAAGGGAGCCTGGGAGGGCACCAAGGCCTATGGCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCCACTTCCATGGCGTaGTTCACCTCTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYATSMA*FTSGGS
Trigger: AGAGCCTCCAGAGGTGAAGCACGCCATGGAAGTGGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTGGGCGGCCAAGCATaGTTAACCCATGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLGGQA*LTHGCL
Trigger: AAGGCAGCCATGGGTTAAGCATGCTTGGCCGCCCAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGTGCTTTCTGGGCCTaGGCTACCCTTCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSAFWA*ATLLSS
Trigger: GGAGCTGAGAAGGGTAGCCCAGGCCCAGAAAGCACT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTTCCAGCGAGCCGATaGGGATCCACCCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLPASR*GSTQCP
Trigger: AGGGCATTGGGTGGATCCCCATCGGCTCGCTGGAAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCGAGCCCCAATGTGGTaGCCGAGTTGCTTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRAPMW*PSCFRK
Trigger: CTTCCGAAAGCAACTCGGCCACCACATTGGGGCTCG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCATCCAAAGAGCCAATaGGCACCCAGCCGATGCCTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHPKSQ*APSRCL
Trigger: GAGGCATCGGCTGGGTGCCCATTGGCTCTTTGGATG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTCCGAGCACCAATGTaGTGGCCCAGCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFRAPM*WPSCLR
Trigger: CCGCAAACAGCTGGGCCACCACATTGGTGCTCGGAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGCACAGCATCGGGTaGCAGAATGTAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWHSIG*QNVACG
Trigger: GCCACAGGCTACATTCTGCCACCCGATGCTGTGCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTAGCCATAGGCCTTaGTGCCCTCCCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCSHRP*CPPRLP
Trigger: AGGGAGCCTGGGAGGGCACCAAGGCCTATGGCTACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGATGACTTGGCCGCCTaGATGAAGTCTGGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDDLAA*MKSGRS
Trigger: CGACCGCCCAGACTTCATCCAGGCGGCCAAGTCATC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGCCTTCTTGATGTCTaGCCGGTCAGCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGLLDV*PVSHCG
Trigger: ACCACAGTGGCTGACCGGCCAGACATCAAGAAGGCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCTCACTGGCCTGTTTaGCTGCCTGGGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPHWPV*LPGWPS
Trigger: AGAAGGCCACCCAGGCAGCCAAACAGGCCAGTGAGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTACTCCACCTCACTaGCCTGTTTGGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCTPPH*PVWLPG
Trigger: CCCAGGCAGCCAAACAGGCCAGTGAGGTGGAGTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTATGTGGAAAGGCGCTaGTCCGCAGCTTCGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYVERR*SAASEC
Trigger: GCACTCCGAAGCTGCGGACCAGCGCCTTTCCACATA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGGCCAGGTCCACATTaGTGCTGTCAGGAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGWPGPH*CCQEGS
Trigger: GCTACCCTCCTGACAGCATCAATGTGGACCTGGCCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGCCAGGTCCACATTaGTGCTGTCAGGAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWPGPH*CCQEGS
Trigger: GCTACCCTCCTGACAGCATCAATGTGGACCTGGCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGTCCTGGAGGCTTCTaGAGCCAACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRPGGF*SQRAFP
Trigger: AGGGAAAGCACGTTGGCTTCAGAAGCCTCCAGGACG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGTCCTGGAGGCTTCTaGAGCCAACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRPGGF*SQRAFP
Trigger: AGGGAAAGCACGTTGGCTTCAGAAGCCTCCAGGACG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCCTGCCGAGCGTGGATaGCATCATTCTGATCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYPAERG*HHSDQA
Trigger: TGCCTGATCAGAATGATGTCATCCACGCTCGGCAGG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCCTGCCGAGCGTGGATaGCATCATTCTGGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYPAERG*HHSGQV
Trigger: TACCTGACCAGAATGATGTCATCCACGCTCGGCAGG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGGGGTGTCTGGCATaGCATGGATGGAGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQGCLA*HGWRLC
Trigger: ACAAAGCCTCCATCCATGTCATGCCAGACACCCCTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTGCTTCCCACTCTTaGCTGCCTGAACGTAAACCG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAASHS*LPERKP
Trigger: CGGTTTACGTTCAGGCAGTCAAGAGTGGGAAGCAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTCTGCTTCTTGCCTaGGGCTCTGTACACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLLLLA*GSVHQL
Trigger: GAGCTGGTGTACAGAGCCTCAGGCAAGAAGCAGAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTTGGTCACTGCCTTaGCGTGAACTGTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAWSLP*RELYPW
Trigger: CCAGGGATACAGTTCACGTCAAGGCAGTGACCAAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCTTCTGGGTCTCCTTaGCGCGTTTCACTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRASGSP*RVSLRA
Trigger: TGCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGCAGTAGACGGGTGTaGTGGGATAGAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGSRRV*WDRGQC
Trigger: ACACTGTCCTCTATCCCATCACACCCGTCTACTGCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTCCATCTCTGGAGTaGCAGGTAAGGGGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSPSLE*QVRGSP
Trigger: AGGGGACCCCCTTACCTGTCACTCCAGAGATGGAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTCCATCTCTGGAGTaGTGGGGATCGGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAPSLE*WGSESL
Trigger: AAGGGATTCCGATCCCCATCACTCCAGAGATGGAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTGTTGAGCTGGGCTTaGAACAGCACGGGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVLSWA*NSTGVS
Trigger: CGACACTCCCGTGCTGTTGCAAGCCCAGCTCAACAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTCCGAGGCGCGCTTTaGCTTTTCCATCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFRGAL*LFHLQG
Trigger: TCCCTGGAGATGGAAAAGGCAAAGCGCGCCTCGGAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTCCTGGGCCATCCTTaGAGCAGTGATGCTGACCAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVLGHP*SSDADH
Trigger: ATGGTCAGCATCACTGCTGCAAGGATGGCCCAGGAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTCGTCTTCCAGGCTaGGGAAGCCAATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGRLPG*GSQCAS
Trigger: GGAAGCACATTGGCTTCCGCAGCCTGGAAGACGACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCCACCTGCATGAAGTaGACCAGCTTGGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRATCMK*TSLGSS
Trigger: AGACGACCCCAAGCTGGTGCACTTCATGCAGGTGGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCACTGACAAGGTTCTaGCCTTCCTTGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLTRF*PSLAAT
Trigger: TGTGGCCGCCAAGGAAGGGCAGAACCTTGTCAGTGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAACGCACTCCGCATCTaGTGGAAATCCAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYNALRI*WKSRQW
Trigger: CCACTGCCTGGATTTCCAGCAGATGCGGAGTGCGTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGAGTTTCCTTAGGTaGCGGGAGCGGACCATGTCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQSFLR*RERTMS
Trigger: TGACATGGTCCGCTCCCGGCACCTAAGGAAACTCTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCTGATCTGGTCGCCTaGGGTCTTAGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGADLVA*GLSQQM
Trigger: CATCTGCTGGCTAAGACCGCAGGCGACCAGATCAGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCTGATCTGGTCGCCTaGGGTCTTAGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRADLVA*GLSQQM
Trigger: CATCTGCTGGCTAAGACCGCAGGCGACCAGATCAGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTGTGGTGCGCAGGTaGTCTGGGGTGTCCACAACC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFVVRR*SGVSTT
Trigger: GGTTGTGGACACCCCAGAGCACCTGCGCACCACAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTGTGGTGCGCAGGTaGTCTGGGGTGTCCACAACC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFVVRR*SGVSTT
Trigger: GGTTGTGGACACCCCAGAGCACCTGCGCACCACAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCCACTTCCATGGCGTaGTTCACCTCTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGATSMA*FTSGGS
Trigger: AGAGCCTCCAGAGGTGAAGCACGCCATGGAAGTGGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACTGGCCTGTTTGGCTaGCTGGGTGGCCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTGLFG*LGGLLD
Trigger: ATCAAGAAGGCCACCCAGGCAGCCAAACAGGCCAGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGGGCGGCCAAGCATaGTTAACCCATGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLGGQA*LTHGCL
Trigger: AAGGCAGCCATGGGTTAAGCATGCTTGGCCGCCCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATAGTCCACGTTGCTTaGCAGCGCCTGGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRIVHVA*QRLALL
Trigger: AAGGAGGGCCAGGCGCTGGCAAGCAACGTGGACTAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGTGCTTTCTGGGCCTaGGCTACCCTTCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSAFWA*ATLLSS
Trigger: GGAGCTGAGAAGGGTAGCCCAGGCCCAGAAAGCACT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGTGCTTTCTGGGCCTaGGCTACCCTTCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSAFWA*ATLLSS
Trigger: GGAGCTGAGAAGGGTAGCCCAGGCCCAGAAAGCACT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTGCGGCAGGTCTGCTaGCAGGTTGTACTTATGCAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLRQVC*QVVLMQ
Trigger: CTGCATAAGTACAACCTGCCAGCAGACCTGCCGCAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAACTTGGGGTCGTCCTaGAGGCTTCTGAAGCCAACG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYNLGSS*RLLKPT
Trigger: CGTTGGCTTCAGAAGCCTCCAGGACGACCCCAAGTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATATCCAGGGGTGTGTaGTACCGGGTCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRISRGV*YRVLLA
Trigger: GGCCAGCAAGACCCGGTACCACACACCCCTGGATAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATATCCAGGGGTGTGTaGTACCGGGTCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVISRGV*YRVLLA
Trigger: GGCCAGCAAGACCCGGTACCACACACCCCTGGATAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTGGTGGCCACTTCCTaGGACTTCTTGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLVATS*DFLAAT
Trigger: GGTGGCAGCCAAGAAGTCCCAGGAAGTGGCCACCAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGAGCCCCAATGTGGTaGCCGAGTTGCTTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRAPMW*PSCFRK
Trigger: CTTCCGAAAGCAACTCGGCCACCACATTGGGGCTCG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGAGCCCCAATGTGGTaGCCGAGTTGCTTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRAPMW*PSCFRK
Trigger: CTTCCGAAAGCAACTCGGCCACCACATTGGGGCTCG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATCCAAAGAGCCAATaGGCACCCAGCCGATGCCTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHPKSQ*APSRCL
Trigger: GAGGCATCGGCTGGGTGCCCATTGGCTCTTTGGATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCTTCTTCCATGGCCTaGCGGTACAGGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVASSMA*RYRLSL
Trigger: CAGTGAGAGCCTGTACCGCCAGGCCATGGAAGAAGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCCGAGCACCAATGTaGTGGCCCAGCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFRAPM*WPSCLR
Trigger: CCGCAAACAGCTGGGCCACCACATTGGTGCTCGGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCCGAGCACCAATGTaGTGGCCCAGCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFRAPM*WPSCLR
Trigger: CCGCAAACAGCTGGGCCACCACATTGGTGCTCGGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCATCTTCCACACTCTaGGCTCCGATGTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSSSTL*APMWWP
Trigger: AGGCCACCACATCGGAGCCCAGAGTGTGGAAGATGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCGGGGCTCTGGAACTTaGTCTTCCATTTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRGSGT*SSIWPT
Trigger: AGTGGGCCAAATGGAAGACCAAGTTCCAGAGCCCCG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGCACAGCATCGGGTaGCAGAATGTAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWHSIG*QNVACG
Trigger: GCCACAGGCTACATTCTGCCACCCGATGCTGTGCCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTGATCTGGCTGATCTaGTCGCCTGCGGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLIWLI*SPAVLA
Trigger: GGCTAAGACCGCAGGCGACCAGATCAGCCAGATCAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGCGTGCTTCACCTCTaGAGGCTCTTGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGVLHL*RLLHDG
Trigger: TCCATCATGCAAGAGCCTCCAGAGGTGAAGCACGCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCCTTCTTGATGTCTaGCCGGTCAGCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGLLDV*PVSHCG
Trigger: ACCACAGTGGCTGACCGGCCAGACATCAAGAAGGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCCTGTTTGGCTGCCTaGGTGGCCTTCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYACLAA*VAFLMS
Trigger: AGACATCAAGAAGGCCACCCAGGCAGCCAAACAGGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTACTCCACCTCACTaGCCTGTTTGGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCTPPH*PVWLPG
Trigger: CCCAGGCAGCCAAACAGGCCAGTGAGGTGGAGTACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTACTCCACCTCACTaGCCTGTTTGGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCTPPH*PVWLPG
Trigger: CCCAGGCAGCCAAACAGGCCAGTGAGGTGGAGTACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCCTGGCTGCTCAGCTTaGCTGCCTTCTTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYPGCSA*LPSWPF
Trigger: AAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCGCGGTATTTAACCTaGCTGCTCAGCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSRYLT*LLSLAA
Trigger: GGCAGCCAAGCTGAGCAGCCAGGTTAAATACCGCGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATATGTGGAAAGGCGCTaGTCCGCAGCTTCGGAGTGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYVERR*SAASEC
Trigger: GCACTCCGAAGCTGCGGACCAGCGCCTTTCCACATA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATATGTGGAAAGGCGCTaGTCCGCAGCTTCGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYVERR*SAASEC
Trigger: GCACTCCGAAGCTGCGGACCAGCGCCTTTCCACATA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCCGTCACTGTATGTaGAAAGGCGCTGGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLRHCM*KGAGPQ
Trigger: CTGCGGACCAGCGCCTTTCCACATACAGTGACGGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTCCGTCACTGTATGTaGAAAGGCGCTGGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLRHCM*KGAGPQ
Trigger: CTGCGGACCAGCGCCTTTCCACATACAGTGACGGAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCCTCTGGCTGATCTaGTCGCCTGCGGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFLWLI*SPAVLA
Trigger: GGCTAAGACCGCAGGCGACCAGATCAGCCAGAGGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCGCTGGCAATCGCCTaGGATTTCTTAGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLAIA*DFLAWV
Trigger: CACCCAAGCTAAGAAATCTCAGGCGATTGCCAGCGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTATTCCCGGTCTGACTaGATCTTGGCCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYSRSD*ILATCM
Trigger: CATGCAGGTGGCCAAGATTCAGTCAGACCGGGAATA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACTAGCAATGTCCCTTaGTGTCTTGGCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTSNVP*CLGQLD
Trigger: GTCCAGCTGGCCAAGACATCAAGGGACATTGCTAGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTAGTCAGCATCACTaGCCAAGGCCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCSQHH*PRPGTS
Trigger: AGAAGTGCCAGGCCTTGGTCAGTGATGCTGACTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCTGCCGAGCGTGGATaGCATCATTCTGATCAGGCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPAERG*HHSDQA
Trigger: TGCCTGATCAGAATGATGTCATCCACGCTCGGCAGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACCTGCCGAGCGTGGATaGCATCATTCTGATCAGGCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGPAERG*HHSDQA
Trigger: TGCCTGATCAGAATGATGTCATCCACGCTCGGCAGG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCTGCCGAGCGTGGATaGCATCATTCTGATCAGGCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPAERG*HHSDQA
Trigger: TGCCTGATCAGAATGATGTCATCCACGCTCGGCAGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCTGCCGAGCGTGGATaGCATCATTCTGGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPAERG*HHSGQV
Trigger: TACCTGACCAGAATGATGTCATCCACGCTCGGCAGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACAGGGGTGTCTGGCATaGCATGGATGGAGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGQGCLA*HGWRLC
Trigger: ACAAAGCCTCCATCCATGTCATGCCAGACACCCCTG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAGGGGTGTCTGGCATaGCATGGATGGAGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQGCLA*HGWRLC
Trigger: ACAAAGCCTCCATCCATGTCATGCCAGACACCCCTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAATACTTGTGTACTTaGGCTTCACCACGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQYLCT*ASPRGS
Trigger: GGACCCCCGTGGTGAAGCTCAAGTACACAAGTATTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTACTCCAGGTCACTaGGGATATACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGTPGH*GYTGTS
Trigger: AGAGGTGCCAGTATATCCTCAGTGACCTGGAGTACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCGCTGACTTTCTTCTaGGAGTCCTTGGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLTFF*ESLAVT
Trigger: GGTGACTGCCAAGGACTCTCAGAAGAAAGTCAGCGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCTGCTTCCCACTCTTaGCTGCCTGAACGTAAACCG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGAASHS*LPERKP
Trigger: CGGTTTACGTTCAGGCAGTCAAGAGTGGGAAGCAGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGGCCACTTTGCCTCTaGCACTGTGCACGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGPLCL*HCARSH
Trigger: ATGACTACGTGCACAGTGTCAGAGGCAAAGTGGCCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGGCCACTTTGCCTCTaGCACTGTGCACGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGPLCL*HCARSH
Trigger: ATGACTACGTGCACAGTGTCAGAGGCAAAGTGGCCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGGCCACTTTGCCTCTaGCACTGTGCACGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGPLCL*HCARSH
Trigger: ATGACTACGTGCACAGTGTCAGAGGCAAAGTGGCCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTTCTGCTTCTTGCCTaGGGCTCTGTACACCAGCTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLLLLA*GSVHQL
Trigger: GAGCTGGTGTACAGAGCCTCAGGCAAGAAGCAGAAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGACACCAGATTGCTaGCAGTCTTCGCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQTPDC*QSSPRG
Trigger: TCCTCTTGGCGAAGACTGTCAGCAATCTGGTGTCTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCTTGGTCACTGCCTTaGCGTGAACTGTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVAWSLP*RELYPW
Trigger: CCAGGGATACAGTTCACGTCAAGGCAGTGACCAAGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCTTGGTCACTGCCTTaGCGTGAACTGTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRAWSLP*RELYPW
Trigger: CCAGGGATACAGTTCACGTCAAGGCAGTGACCAAGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCCACTCTGCATCTGCTaGGACTCTTTGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYPLCIC*DSLAVM
Trigger: CATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTCAATCTCTGGAGTaGCAGTGGTCGGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSQSLE*QWSGCL
Trigger: CAGGCATCCCGACCACTGTCACTCCAGAGATTGAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTCAATCTCTGGAGTaGCAGTGGTCGGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSQSLE*QWSGCL
Trigger: CAGGCATCCCGACCACTGTCACTCCAGAGATTGAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCAGTAGACGGGTGTaGTGGGATAGAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGSRRV*WDRGQC
Trigger: ACACTGTCCTCTATCCCATCACACCCGTCTACTGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGCAGTAGACGGGTGTaGTGGGATAGAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGSRRV*WDRGQC
Trigger: ACACTGTCCTCTATCCCATCACACCCGTCTACTGCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAATTGACCTGGGCTTaGACCAGGACAGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYELTWA*TRTGES
Trigger: AGACTCTCCTGTCCTGGTGCAAGCCCAGGTCAATTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCGGTCTTCAGGGAGTaGAGCATCTTGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRAVFRE*SILGSS
Trigger: TGATGACCCCAAGATGCTGCACTCCCTGAAGACCGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCCGAGGCGCGCTTTaGCTTTTCCATCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFRGAL*LFHLQG
Trigger: TCCCTGGAGATGGAAAAGGCAAAGCGCGCCTCGGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTCCTGGGCCATCCTTaGAGCAGTGATGCTGACCAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVLGHP*SSDADH
Trigger: ATGGTCAGCATCACTGCTGCAAGGATGGCCCAGGAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTCCTGGGCCATCCTTaGAGCAGTGATGCTGACCAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVLGHP*SSDADH
Trigger: ATGGTCAGCATCACTGCTGCAAGGATGGCCCAGGAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTCCTGGGCCATCCTTaGAGCAGTGATGCTGACCAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVLGHP*SSDADH
Trigger: ATGGTCAGCATCACTGCTGCAAGGATGGCCCAGGAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCTGAGCCAAAACCATaGCCATGGAGTCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGAEPKP*PWSLAH
Trigger: GTGTGCCAGACTCCATGGGCATGGTTTTGGCTCAGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCGTTTTGGTCAGGCATaGACGTCCACTCGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRFGQA*TSTRVG
Trigger: ACCTACACGAGTGGACGTGCATGCCTGACCAAAACG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCACTGACAAGGTTCTaGCCTTCCTTGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSLTRF*PSLAAT
Trigger: TGTGGCCGCCAAGGAAGGGCAGAACCTTGTCAGTGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCACTGACAAGGTTCTaGCCTTCCTTGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSLTRF*PSLAAT
Trigger: TGTGGCCGCCAAGGAAGGGCAGAACCTTGTCAGTGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAACGCACTCCGCATCTaGTGGAAATCCAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGNALRI*WKSRQW
Trigger: CCACTGCCTGGATTTCCAGCAGATGCGGAGTGCGTT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAACGCACTCCGCATCTaGTGGAAATCCAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRNALRI*WKSRQW
Trigger: CCACTGCCTGGATTTCCAGCAGATGCGGAGTGCGTT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACTCTGAAGCTTGTATaGATGGAGGGCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTLKLV*MEGPVQ
Trigger: CTGGACCGGGCCCTCCATGCATACAAGCTTCAGAGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACTCTGAAGCTTGTATaGATGGAGGGCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTLKLV*MEGPVQ
Trigger: CTGGACCGGGCCCTCCATGCATACAAGCTTCAGAGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACAGAGTTTCCTTAGGTaGCGGGAGCGGACCATGTCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGQSFLR*RERTMS
Trigger: TGACATGGTCCGCTCCCGGCACCTAAGGAAACTCTG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAGAGTTTCCTTAGGTaGCGGGAGCGGACCATGTCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQSFLR*RERTMS
Trigger: TGACATGGTCCGCTCCCGGCACCTAAGGAAACTCTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAGCCTTGGGCCAGGTaGTTCTTGACATGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVEPWAR*FLTWSL
Trigger: CAAGGACCATGTCAAGAAGCACCTGGCCCAAGGCTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAGCCTTGGGCCAGGTaGTTCTTGACATGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGEPWAR*FLTWSL
Trigger: CAAGGACCATGTCAAGAAGCACCTGGCCCAAGGCTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACTGGCCTGTTTGGCTaGCTGGGTGGCCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTGLFG*LGGLLD
Trigger: ATCAAGAAGGCCACCCAGGCAGCCAAACAGGCCAGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGCCTTCCTTGCGATaGTTGGCTCTGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLPSLR*LALYST
Trigger: GGTGGAGTACAGAGCCAAGCATCGCAAGGAAGGCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTGCCTTCCTTGCGATaGTTGGCTCTGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLPSLR*LALYST
Trigger: GGTGGAGTACAGAGCCAAGCATCGCAAGGAAGGCAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCATGGCTGCCTTCCTTaGGATGCTTGGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHGCLP*DAWLCT
Trigger: AGTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTCCTGCCAGTTCTCTaGACAGTGCCATACATCCAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVLPVL*TVPYIQ
Trigger: CTGGATGTATGGCACTGTGCAGAGAACTGGCAGGAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTGCCAGCGCTGGTGTaGCAGTTTCTGATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVPALV*QFLIGH
Trigger: ATGGCCAATCAGAAACTGCCACACCAGCGCTGGCAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCCTGGGTAATGGTCTaGGGGAAGAAGCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSWVMV*GKKPLP
Trigger: AGGCAAAGGCTTCTTCCCCCAGACCATTACCCAGGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCGTTCACTCTGTGCTaGATAAAGGCAGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAFTLC*IKAGAS
Trigger: GGATGCTCCTGCCTTTATCCAGCACAGAGTGAACGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTTGGCTGCCAGCAGTaGGATGGCATCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFGCQQ*DGIHLD
Trigger: ATCAAGGTGGATGCCATCCCACTGCTGGCAGCCAAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGCGGCAGGTCTGCTaGCAGGTTGTACTTATGCAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLRQVC*QVVLMQ
Trigger: CTGCATAAGTACAACCTGCCAGCAGACCTGCCGCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTGCGGCAGGTCTGCTaGCAGGTTGTACTTATGCAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLRQVC*QVVLMQ
Trigger: CTGCATAAGTACAACCTGCCAGCAGACCTGCCGCAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAACTTGGGGTCGTCCTaGAGGCTTCTGAAGCCAACG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVNLGSS*RLLKPT
Trigger: CGTTGGCTTCAGAAGCCTCCAGGACGACCCCAAGTT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCTCCAAGGAGTCTATaGGGACCCAGCCGATACCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPPRSL*GPSRYL
Trigger: AAGGTATCGGCTGGGTCCCCATAGACTCCTTGGAGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGCTTCTCGGGGTGCTaGCGATACTTTCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSFSGC*RYFLSL
Trigger: GAGTGAGAGAAAGTATCGCCAGCACCCCGAGAAGCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCATAGCCTTGCCTCCTaGCCTCCTCCAGAGACACTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHSLAS*PPPETL
Trigger: AAGTGTCTCTGGAGGAGGCCAGGAGGCAAGGCTATG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATAGCCTTGCCTCCTaGCCTCCTCCAGAGACACTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHSLAS*PPPETL
Trigger: AAGTGTCTCTGGAGGAGGCCAGGAGGCAAGGCTATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGCTGGTCTGCAGGCTaGCGATACTTCCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSWSAG*RYFLSL
Trigger: GAGTGACAGGAAGTATCGCCAGCCTGCAGACCAGCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGCTGGTCTGCAGGCTaGCGATACTTCCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSWSAG*RYFLSL
Trigger: GAGTGACAGGAAGTATCGCCAGCCTGCAGACCAGCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGCTGGTCTGCAGGCTaGCGATACTTCCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSWSAG*RYFLSL
Trigger: GAGTGACAGGAAGTATCGCCAGCCTGCAGACCAGCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGCAGAATTGCTCTTaGCCAGCAGGATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWQNCS*PAGFQG
Trigger: CCCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGGCGCCCTTCACTCTaGTCATTTCTATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGRPSL*SFLWSL
Trigger: AAGGCTCCATAGAAATGACCAGAGTGAAGGGCGCCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGGGGCTCTGGAACTTaGTCTTCCATTTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRGSGT*SSIWPT
Trigger: AGTGGGCCAAATGGAAGACCAAGTTCCAGAGCCCCG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGGGGCTCTGGAACTTaGTCTTCCATTTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRGSGT*SSIWPT
Trigger: AGTGGGCCAAATGGAAGACCAAGTTCCAGAGCCCCG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGGGCATGAACGAATaGCACAGCATCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMGMNE*HSIGWQ
Trigger: CTGCCACCCGATGCTGTGCCATTCGTTCATGCCCAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGGGCATGAACGAATaGCACAGCATCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMGMNE*HSIGWQ
Trigger: CTGCCACCCGATGCTGTGCCATTCGTTCATGCCCAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCACTGAGGATATACTaGCACCTCTTCGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLRIY*HLFAST
Trigger: CGTGCTGGCGAAGAGGTGCCAGTATATCCTCAGTGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGCAGGGAGATCATGTaGCCCTGCATCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGREIM*PCILKK
Trigger: CTTCTTCAAGATGCAGGGCCACATGATCTCCCTGCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTGATCTGGCTGATCTaGTCGCCTGCGGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLIWLI*SPAVLA
Trigger: GGCTAAGACCGCAGGCGACCAGATCAGCCAGATCAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTGTGTCATGGATGGTaGTGTAGCCTCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVCHGW*CSLLVW
Trigger: CCAGACCAAGAGGCTACACCACCATCCATGACACAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGGTGTGTCATGGATaGTGGTGTAGCCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWVCHG*WCSLLV
Trigger: GACCAAGAGGCTACACCACCATCCATGACACACCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGACATGCAGCAGCATaGGTGTGTCATGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGHAAA*VCHGWW
Trigger: CCACCATCCATGACACACCCATGCTGCTGCATGTCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGACATGCAGCAGCATaGGTGTGTCATGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGHAAA*VCHGWW
Trigger: CCACCATCCATGACACACCCATGCTGCTGCATGTCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCGTGCTTCACCTCTaGAGGCTCTTGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGVLHL*RLLHDG
Trigger: TCCATCATGCAAGAGCCTCCAGAGGTGAAGCACGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGCGTGCTTCACCTCTaGAGGCTCTTGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGVLHL*RLLHDG
Trigger: TCCATCATGCAAGAGCCTCCAGAGGTGAAGCACGCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCGTGCTTCACCTCTaGAGGCTCTTGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGVLHL*RLLHDG
Trigger: TCCATCATGCAAGAGCCTCCAGAGGTGAAGCACGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCCTGTTTGGCTGCCTaGGTGGCCTTCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRACLAA*VAFLMS
Trigger: AGACATCAAGAAGGCCACCCAGGCAGCCAAACAGGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTCCTTGCGATGCTTaGCTCTGTACTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLPCDA*LCTPPH
Trigger: GTGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGCATGCTTAACCCATaGCTGCCTTCCTTGCGATGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSMLNP*LPSLRC
Trigger: GCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTTGGCTGCCTTCTTaGCCATTTCAATGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAWLPS*PFQCLG
Trigger: GCCCAGACATTGAAATGGCCAAGAAGGCAGCCAAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCTGGCTGCTCAGCTTaGCTGCCTTCTTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPGCSA*LPSWPF
Trigger: AAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCGCGGTATTTAACCTaGCTGCTCAGCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSRYLT*LLSLAA
Trigger: GGCAGCCAAGCTGAGCAGCCAGGTTAAATACCGCGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAATCTGGAGTCTCGTTaGCCATGGCATTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYNLESR*PWHSGL
Trigger: GAGGCCTGAATGCCATGGCCAACGAGACTCCAGATT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGCCCGCATAAAATCTaGAGTCTCGTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGPHKI*SLVGHG
Trigger: GCCATGGCCAACGAGACTCCAGATTTTATGCGGGCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCCCGCATAAAATCTaGAGTCTCGTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGPHKI*SLVGHG
Trigger: GCCATGGCCAACGAGACTCCAGATTTTATGCGGGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGAGTGACAGGGGTTaGGGTGGCTTTCCCCACATT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWSDRG*GGFPHI
Trigger: AATGTGGGGAAAGCCACCCCAACCCCTGTCACTCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGGAGTGACAGGGGTTaGGGTGGCTTTCCCCACATT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGWSDRG*GGFPHI
Trigger: AATGTGGGGAAAGCCACCCCAACCCCTGTCACTCCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCTCTCTCCATGTCTaGAGTGACAGGCGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGSLHV*SDRRWC
Trigger: ACACCAACGCCTGTCACTCCAGACATGGAGAGAGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCTCTCTCCATGTCTaGAGTGACAGGCGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGSLHV*SDRRWC
Trigger: ACACCAACGCCTGTCACTCCAGACATGGAGAGAGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGCTCTCTCCATGTCTaGAGTGACAGGCGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGSLHV*SDRRWC
Trigger: ACACCAACGCCTGTCACTCCAGACATGGAGAGAGCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTTGAGATGTGCCGTTaGGTTTCCCTAACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVEMCR*VSLTRL
Trigger: GAGGCGGGTTAGGGAAACCCAACGGCACATCTCAAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTTGAGATGTGCCGTTaGGTTTCCCTAACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVEMCR*VSLTRL
Trigger: GAGGCGGGTTAGGGAAACCCAACGGCACATCTCAAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTTGAGATGTGCCGTTaGGTTTCCCTAACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVEMCR*VSLTRL
Trigger: GAGGCGGGTTAGGGAAACCCAACGGCACATCTCAAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTGGAGTATCACTTGTaGTGGCGTATGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLEYHL*WRMAVP
Trigger: AGGGACAGCCATACGCCATCACAAGTGATACTCCAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGGAGTATCACTTGTaGTGGCGTATGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLEYHL*WRMAVP
Trigger: AGGGACAGCCATACGCCATCACAAGTGATACTCCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTGGAGTATCACTTGTaGTGGCGTATGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLEYHL*WRMAVP
Trigger: AGGGACAGCCATACGCCATCACAAGTGATACTCCAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACATGGCTGTGTTCTTaGCGGCTTGGACAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTWLCS*RLGQVQ
Trigger: CTGAACTTGTCCAAGCCGTCAAGAACACAGCCATGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCAGCTGTTTGGAATTaGCCTGGGCTTGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSAVWN*PGLAPG
Trigger: TCCTGGTGCAAGCCCAGGTCAATTCCAAACAGCTGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCAGCTGTTTGGAATTaGCCTGGGCTTGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSAVWN*PGLAPG
Trigger: TCCTGGTGCAAGCCCAGGTCAATTCCAAACAGCTGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGAAGGGTGTCAAGTTaGTACTTGGGGGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRRVSS*YLGVSQ
Trigger: CTGTGAGACCCCCAAGTATCAACTTGACACCCTTCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCGCTGGCAATCGCCTaGGATTTCTTAGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSLAIA*DFLAWV
Trigger: CACCCAAGCTAAGAAATCTCAGGCGATTGCCAGCGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTGGAGTGTCAGGCATaGCATGAATGCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLECQA*HECWSC
Trigger: ACAAGACCAGCATTCATGTCATGCCTGACACTCCAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCGATGGCATCAGGCTTaGGATCATAGCCTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRWHQA*DHSLSS
Trigger: AGACGAAAGGCTATGATCTCAAGCCTGATGCCATCG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTATTCCCGGTCTGACTaGATCTTGGCCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYSRSD*ILATCM
Trigger: CATGCAGGTGGCCAAGATTCAGTCAGACCGGGAATA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTTGTATTCCCGGTCTaGCTGAATCTTGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLVFPV*LNLGHL
Trigger: CAGGTGGCCAAGATTCAGTCAGACCGGGAATACAAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATCCAATGCCCTTCATaGAGTCGGCATAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIQCPS*SRHSLP
Trigger: AGGCAGACTATGCCGACTTCATGAAGGGCATTGGAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTAGTTGGTGTTGGTaGTGTTGGCTTGCGCATCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCSWCW*CWLAHP
Trigger: AGGATGCGCAAGCCAACATCACCAACACCAACTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGCTGCCGGTACTTCTaGTCGCTGGCATATTCCGTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCCRYF*SLAYSV
Trigger: AACGGAATATGCCAGCGATCAGAAGTACCGGCAGCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGCTGCCGGTACTTCTaGTCGCTGGCATATTCCGTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCCRYF*SLAYSV
Trigger: AACGGAATATGCCAGCGATCAGAAGTACCGGCAGCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACTAGCAATGTCCCTTaGTGTCTTGGCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTSNVP*CLGQLD
Trigger: GTCCAGCTGGCCAAGACATCAAGGGACATTGCTAGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTAGTCAGCATCACTaGCCAAGGCCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCSQHH*PRPGTS
Trigger: AGAAGTGCCAGGCCTTGGTCAGTGATGCTGACTACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTAGTCAGCATCACTaGCCAAGGCCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCSQHH*PRPGTS
Trigger: AGAAGTGCCAGGCCTTGGTCAGTGATGCTGACTACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACAGCTCTCTTACACTTaGCCACATCCAGAGACCCGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGQLSYT*PHPETR
Trigger: TCGGGTCTCTGGATGTGGTCAAGTGTAAGAGAGCTG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAGCTCTCTTACACTTaGCCACATCCAGAGACCCGA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQLSYT*PHPETR
Trigger: TCGGGTCTCTGGATGTGGTCAAGTGTAAGAGAGCTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGCCCTCTTGGCTTTaGCAACTTCCAAGGAACCAA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWPSWL*QLPRNQ
Trigger: TTGGTTCCTTGGAAGTTGTCAAAGCCAAGAGGGCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAATACTTGTGTACTTaGGCTTCACCACGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQYLCT*ASPRGS
Trigger: GGACCCCCGTGGTGAAGCTCAAGTACACAAGTATTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAATACTTGTGTACTTaGGCTTCACCACGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQYLCT*ASPRGS
Trigger: GGACCCCCGTGGTGAAGCTCAAGTACACAAGTATTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATCACAGCTCATCTTaGCTTCATCCCACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHHSSS*LHPTPH
Trigger: GTGAGGGGTGGGATGAAGTCAAGATGAGCTGTGATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTAATCGATGTCACTaGCAAGGTTCTGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGNRCH*QGSALP
Trigger: AGGAAGGGCAGAACCTTGTCAGTGACATCGATTACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTACTCCAGGTCACTaGGGATATACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGTPGH*GYTGTS
Trigger: AGAGGTGCCAGTATATCCTCAGTGACCTGGAGTACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCGCTGACTTTCTTCTaGGAGTCCTTGGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSLTFF*ESLAVT
Trigger: GGTGACTGCCAAGGACTCTCAGAAGAAAGTCAGCGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCGCTGACTTTCTTCTaGGAGTCCTTGGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSLTFF*ESLAVT
Trigger: GGTGACTGCCAAGGACTCTCAGAAGAAAGTCAGCGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTAGTCGATCTCGCTaGCTTTCTTCTGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGSRSR*LSSESP
Trigger: AGGACTCTCAGAAGAAAGTCAGCGAGATCGACTACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCTGTGACTTTGCGATaGTACACAATGTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSVTLR*YTMSRA
Trigger: CGCCCTGGACATTGTGTATCATCGCAAAGTCACAGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACAGACACCAGATTGCTaGCAGTCTTCGCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGQTPDC*QSSPRG
Trigger: TCCTCTTGGCGAAGACTGTCAGCAATCTGGTGTCTG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTGGAGGCTCTTGCATaGTGGAGTAGTTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLEALA*WSSWTC
Trigger: GCAAGTCCAACTACTCCATCATGCAAGAGCCTCCAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTGGAGGCTCTTGCATaGTGGAGTAGTTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLEALA*WSSWTC
Trigger: GCAAGTCCAACTACTCCATCATGCAAGAGCCTCCAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCACTCTGCATCTGCTaGGACTCTTTGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPLCIC*DSLAVM
Trigger: CATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCACTCTGCATCTGCTaGGACTCTTTGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPLCIC*DSLAVM
Trigger: CATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCGTTTGCTTCACTCTaGGCATCTCAGGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVAFASL*ASQASF
Trigger: GAAAGACGCCTGAGATGCTCAGAGTGAAGCAAACGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCGTTTGCTTCACTCTaGGCATCTCAGGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGAFASL*ASQASF
Trigger: GAAAGACGCCTGAGATGCTCAGAGTGAAGCAAACGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTCCATCTCAGGAGTaGAGGGTGTGGGGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFPSQE*RVWGLL
Trigger: AAGCAACCCCCACACCCTTCACTCCTGAGATGGAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTCCATGTCTGGAGTaGCAGGCGTTGGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSPCLE*QALVLL
Trigger: AAGCAACACCAACGCCTGTCACTCCAGACATGGAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTCCATGTCTGGAGTaGCAGGCGTTGGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSPCLE*QALVLL
Trigger: AAGCAACACCAACGCCTGTCACTCCAGACATGGAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTTCGGGATTaGATGTTGTCTTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCRLRD*MLSSAG
Trigger: TCCGGCAGAAGACAACATTCAATCCCGAAGTCTGCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCAATATCACTCAGTaGTTTCTGGGCCTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGNITQ*FLGLGY
Trigger: GTAGCCCAGGCCCAGAAAGCACTGAGTGATATTGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCAATATCACTCAGTaGTTTCTGGGCCTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGNITQ*FLGLGY
Trigger: GTAGCCCAGGCCCAGAAAGCACTGAGTGATATTGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGGGGAAGAAGCCTTTaGCTCTGTCCTCTTCATACT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGGRSL*LCPLHT
Trigger: AGTATGAAGAGGACAGAGGCAAAGGCTTCTTCCCCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAATTGACCTGGGCTTaGACCAGGACAGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGELTWA*TRTGES
Trigger: AGACTCTCCTGTCCTGGTGCAAGCCCAGGTCAATTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAACTGCGGCAGGTCTaGTGGCAGGTTGTACTTATG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVELRQV*WQVVLM
Trigger: CATAAGTACAACCTGCCAGCAGACCTGCCGCAGTTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGAACTGCGGCAGGTCTaGTGGCAGGTTGTACTTATG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRELRQV*WQVVLM
Trigger: CATAAGTACAACCTGCCAGCAGACCTGCCGCAGTTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCTGATCACATCCTGTaGCTTCTTAGCCGCCACAAC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVADHIL*LLSRHN
Trigger: GTTGTGGCGGCTAAGAAGGCACAGGATGTGATCAGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCTGATCACATCCTGTaGCTTCTTAGCCGCCACAAC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRADHIL*LLSRHN
Trigger: GTTGTGGCGGCTAAGAAGGCACAGGATGTGATCAGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATATCACTGGCTTGCTaGGTGTTCTGCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYISLAC*VFCFAC
Trigger: GCAGGCAAAGCAGAACACGCAGCAAGCCAGTGATAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATCTCTGGAGGCCTTTaGAGCCTTTATTGCGATGGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYISGGL*SLYCDG
Trigger: GCCATCGCAATAAAGGCTGCAAAGGCCTCCAGAGAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTGGTGATGTTGGCTTaGGCATCCTTGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLVMLA*ASLAAV
Trigger: CACAGCAGCCAAGGATGCGCAAGCCAACATCACCAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGCTCGATGTTCATTaGGTCTGGGAGGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQLDVH*VWEEDV
Trigger: TACATCCTCCTCCCAGACGCAATGAACATCGAGCTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTGGCATATTCCGTTaGTTTCTTGGCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAGIFR*FLGLLH
Trigger: GTGGAGAAGGCCAAGAAAGCAACGGAATATGCCAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCCGGGATGCTTTTGCTaGTTTGATTGGAATGGCGTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYPGCFC*FDWNGV
Trigger: GACGCCATTCCAATCAAAGCAGCAAAAGCATCCCGG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTCCCGGGATGCTTTTaGTGCTTTGATTGGAATGGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLPGCF*CFDWNG
Trigger: GCCATTCCAATCAAAGCAGCAAAAGCATCCCGGGAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGCAATCTCCCGGGATaGTTTTGCTGCTTTGATTGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGNLPG*FCCFDW
Trigger: CCAATCAAAGCAGCAAAAGCATCCCGGGAGATTGCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTGGCCCAGCTGCTTaGGGTAGCCATCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGGPAA*GSHLCI
Trigger: AATACAAAGATGGCTACCGCAAGCAGCTGGGCCACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTGGCCCAGCTGCTTaGGGTAGCCATCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGGPAA*GSHLCI
Trigger: AATACAAAGATGGCTACCGCAAGCAGCTGGGCCACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTCGCTCAGGATCTCTaGAGCTCTCTTACACTTGAC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVAQDL*SSLTLD
Trigger: GTCAAGTGTAAGAGAGCTGCAGAGATCCTGAGCGAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTACTCACGGTCACTCTaGACTTTGGCAATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYSRSL*TLAMWR
Trigger: CCTCCACATTGCCAAAGTGCAGAGTGACCGTGAGTA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTCCATTTGGCCCACTaGAGCCTGTACTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFHLAH*SLYSLS
Trigger: TGAAAGGGAGTACAGGCTGCAGTGGGCCAAATGGAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGTTTTGGTCAGGCATaGACGTCCACTCGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRFGQA*TSTRVG
Trigger: ACCTACACGAGTGGACGTGCATGCCTGACCAAAACG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGTTTTGGTCAGGCATaGACGTCCACTCGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRFGQA*TSTRVG
Trigger: ACCTACACGAGTGGACGTGCATGCCTGACCAAAACG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGTTTTGGTCAGGCATaGACGTCCACTCGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRFGQA*TSTRVG
Trigger: ACCTACACGAGTGGACGTGCATGCCTGACCAAAACG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATATGGCTGGCCAGGTaGTTCTGGTTCTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIWLAR*FWFLAC
Trigger: ACATGCCAAGAACCAGAAGCACCTGGCCAGCCATAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACAGCATCACTCAGCTaGTTCCCACTCTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTASLS*FPLLTA
Trigger: GGCAGTCAAGAGTGGGAAGCAGCTGAGTGATGCTGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTCATCCTTCACTTTaGGGACATGCAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLHPSL*GHAAAW
Trigger: CCATGCTGCTGCATGTCCGCAAAGTGAAGGATGAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGACGTGCTTGGTCACTaGCTTGACGTGAACTGTATC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDVLGH*LDVNCI
Trigger: GATACAGTTCACGTCAAGGCAGTGACCAAGCACGTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCATGGCTGCCTTCCTTaGGATGCTTGGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHGCLP*DAWLCT
Trigger: AGTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATGGCTGCCTTCCTTaGGATGCTTGGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHGCLP*DAWLCT
Trigger: AGTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGACCTCTGCCTCGGATaGTTTCTTCCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDLCLG*FLPGLS
Trigger: GGAAAGACCTGGAAGAAAGCATCCGAGGCAGAGGTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGACCTCTGCCTCGGATaGTTTCTTCCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDLCLG*FLPGLS
Trigger: GGAAAGACCTGGAAGAAAGCATCCGAGGCAGAGGTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAAGGGTGTGGGGGTTaGTTTCCCCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYEGCGG*FPHVLF
Trigger: AAAGAGAACATGGGGAAAGCAACCCCCACACCCTTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTCCTGCCAGTTCTCTaGACAGTGCCATACATCCAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVLPVL*TVPYIQ
Trigger: CTGGATGTATGGCACTGTGCAGAGAACTGGCAGGAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCGTTCACTCTGTGCTaGATAAAGGCAGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRAFTLC*IKAGAS
Trigger: GGATGCTCCTGCCTTTATCCAGCACAGAGTGAACGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTGGCTGCCAGCAGTaGGATGGCATCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFGCQQ*DGIHLD
Trigger: ATCAAGGTGGATGCCATCCCACTGCTGGCAGCCAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTTTGGTGTTGAGCTaGGCTTGCAACAGCACGGGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCLVLS*ACNSTG
Trigger: TCCCGTGCTGTTGCAAGCCCAGCTCAACACCAAACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTTTGGTGTTGAGCTaGGCTTGCAACAGCACGGGA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCLVLS*ACNSTG
Trigger: TCCCGTGCTGTTGCAAGCCCAGCTCAACACCAAACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTTTGGTGTTGAGCTaGGCTTGCAACAGCACGGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCLVLS*ACNSTG
Trigger: TCCCGTGCTGTTGCAAGCCCAGCTCAACACCAAACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTCCGGTGCATCTGCTaGCACGCTGCACTTGAATTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFRCIC*HAALEF
Trigger: AAATTCAAGTGCAGCGTGCCAGCAGATGCACCGGAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGCCTGGAGAAACTGTaGGAGATCAGGATTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGLEKL*EIRIQS
Trigger: ACTCTGAATCCTGATCTCCCACAGTTTCTCCAGGCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGCAACGATGGGAATaGCATCTGGTCTCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQQRWE*HLVSSR
Trigger: ACGACTTGAGACCAGATGCCATTCCCATCGTTGCTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGCTTCTCGGGGTGCTaGCGATACTTTCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSFSGC*RYFLSL
Trigger: GAGTGAGAGAAAGTATCGCCAGCACCCCGAGAAGCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTCACTCTGCACTTTaGCAATGTGGAGGGACCACA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGHSAL*QCGGTT
Trigger: TGTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACATGTGAACTTCAGCTaGTCTGCAGGCTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGHVNFS*SAGWRY
Trigger: GTATCGCCAGCCTGCAGACCAGCTGAAGTTCACATG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATGTGAACTTCAGCTaGTCTGCAGGCTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHVNFS*SAGWRY
Trigger: GTATCGCCAGCCTGCAGACCAGCTGAAGTTCACATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGCAGAATTGCTCTTaGCCAGCAGGATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWQNCS*PAGFQG
Trigger: CCCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGCAGAATTGCTCTTaGCCAGCAGGATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWQNCS*PAGFQG
Trigger: CCCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTCTGGTCATTTCTATaGAGCCTTCCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLWSFL*SLPASS
Trigger: GCTGGATGCCGGAAGGCTCCATAGAAATGACCAGAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCTGGTCATTTCTATaGAGCCTTCCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLWSFL*SLPASS
Trigger: GCTGGATGCCGGAAGGCTCCATAGAAATGACCAGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGGCGCCCTTCACTCTaGTCATTTCTATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGRPSL*SFLWSL
Trigger: AAGGCTCCATAGAAATGACCAGAGTGAAGGGCGCCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACTTGGTCTTCCATTTaGCCCACTGCAGCCTGTACT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTWSSI*PTAACT
Trigger: AGTACAGGCTGCAGTGGGCCAAATGGAAGACCAAGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGCAGTGTGCAGCAGTaGGGTTTCTGTAAGGGTATA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGSVQQ*GFCKGI
Trigger: TATACCCTTACAGAAACCCCACTGCTGCACACTGCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCAGAATGTAGCCTGTaGCTTTCTGTTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAECSL*LSVSPS
Trigger: GCTGGGAGAAACAGAAAGCCACAGGCTACATTCTGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTCTTCGCCAGCACGTaGTTCATCATGTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLFAST*FIMSLG
Trigger: TCCCAATGACATGATGAACCACGTGCTGGCGAAGAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCACTGAGGATATACTaGCACCTCTTCGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSLRIY*HLFAST
Trigger: CGTGCTGGCGAAGAGGTGCCAGTATATCCTCAGTGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCACTGAGGATATACTaGCACCTCTTCGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSLRIY*HLFAST
Trigger: CGTGCTGGCGAAGAGGTGCCAGTATATCCTCAGTGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCAGGTTATAGCTGGTaGCTTTCACCTTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAGYSW*LSPYPR
Trigger: CCTGGGATAAGGTGAAAGCCACCAGCTATAACCTGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTGCTTCTGGTTCTTaGCATGTGTCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGASGS*HVSGTR
Trigger: CCTTGTCCCTGACACATGCCAAGAACCAGAAGCACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTGCTTCTGGTTCTTaGCATGTGTCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGASGS*HVSGTR
Trigger: CCTTGTCCCTGACACATGCCAAGAACCAGAAGCACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCTCGGTATTTGATATaGCTGGCCAGGTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSRYLI*LARCFW
Trigger: CCAGAAGCACCTGGCCAGCCATATCAAATACCGAGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCTTCTGAGAGTCCTTaGCAGTCACCATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSSESP*QSPSPP
Trigger: TGGTGGAGATGGTGACTGCCAAGGACTCTCAGAAGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCACCGTTTTTGTAGTTaGGGCCACTTTGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHRFCS*GHFASD
Trigger: GTCAGAGGCAAAGTGGCCCCAACTACAAAAACGGTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAAACGGGACATCCTTaGGTCCAAGTGTGTACCCAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQTGHP*VQVCTH
Trigger: ATGGGTACACACTTGGACCCAAGGATGTCCCGTTTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTGACTCTCCGGACATaGACAAACGGGACATCCTTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLTLRT*TNGTSL
Trigger: CAAGGATGTCCCGTTTGTCCATGTCCGGAGAGTCAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGCAGGGAGATCATGTaGCCCTGCATCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGREIM*PCILKK
Trigger: CTTCTTCAAGATGCAGGGCCACATGATCTCCCTGCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCAGGGAGATCATGTaGCCCTGCATCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGREIM*PCILKK
Trigger: CTTCTTCAAGATGCAGGGCCACATGATCTCCCTGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTCCTGTATTTGATCTaGCTGATCTGGTCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFLYLI*LIWSPA
Trigger: CGCAGGCGACCAGATCAGCCAGATCAAATACAGGAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTGTGTCATGGATGGTaGTGTAGCCTCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVCHGW*CSLLVW
Trigger: CCAGACCAAGAGGCTACACCACCATCCATGACACAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGGTGTGTCATGGATaGTGGTGTAGCCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWVCHG*WCSLLV
Trigger: GACCAAGAGGCTACACCACCATCCATGACACACCCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGGTGTGTCATGGATaGTGGTGTAGCCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWVCHG*WCSLLV
Trigger: GACCAAGAGGCTACACCACCATCCATGACACACCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGTGAACTGTATCCCTaGTCTCTGGCAGGGTCGTAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRELYP*SLAGSY
Trigger: ATACGACCCTGCCAGAGACCAGGGATACAGTTCACG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGTGAACTGTATCCCTaGTCTCTGGCAGGGTCGTAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRELYP*SLAGSY
Trigger: ATACGACCCTGCCAGAGACCAGGGATACAGTTCACG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCCGGTCAGCCACTGTaGTGTAATGCAGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAGQPL*CNADSL
Trigger: AAGAGAATCTGCATTACACCACAGTGGCTGACCGGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTTCCTTGCGATGCTTaGCTCTGTACTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLPCDA*LCTPPH
Trigger: GTGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTTCCTTGCGATGCTTaGCTCTGTACTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLPCDA*LCTPPH
Trigger: GTGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGCATGCTTAACCCATaGCTGCCTTCCTTGCGATGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSMLNP*LPSLRC
Trigger: GCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGCATGCTTAACCCATaGCTGCCTTCCTTGCGATGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSMLNP*LPSLRC
Trigger: GCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCTTGGCTGCCTTCTTaGCCATTTCAATGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGAWLPS*PFQCLG
Trigger: GCCCAGACATTGAAATGGCCAAGAAGGCAGCCAAGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCTGTGGCTTCTCTGTaGTGTAGCTGTTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSVASL*CSCSRL
Trigger: CAACCTGGAACAGCTACACCACAGAGAAGCCACAGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCTGAGTGGCATTCTTaGCTCTCAGCATGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSEWHS*LSACQE
Trigger: CTCCTGACATGCTGAGAGCCAAGAATGCCACTCAGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAATCTGGAGTCTCGTTaGCCATGGCATTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVNLESR*PWHSGL
Trigger: GAGGCCTGAATGCCATGGCCAACGAGACTCCAGATT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAATCTGGAGTCTCGTTaGCCATGGCATTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGNLESR*PWHSGL
Trigger: GAGGCCTGAATGCCATGGCCAACGAGACTCCAGATT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGGCTGAAGTTCTTCTaGTTCTCGCGGACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRLKFF*FSRTLC
Trigger: GCAAAGAGTCCGCGAGAACCAGAAGAACTTCAGCCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAGCTAATGTGCTTCTaGGTCTCCTTGACGCGTTTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYELMCF*VSLTRF
Trigger: GAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGGGTCTGTCACCACTaGTGTAAAGCAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRVCHH*CKAAFV
Trigger: CACAAAGGCTGCTTTACACCAGTGGTGACAGACCCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTGTTGTCTGCTGGGTaGCAACTGAAGATGACCGTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVLSAG*QLKMTV
Trigger: AACGGTCATCTTCAGTTGCCACCCAGCAGACAACAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTCAGCCTTGTAGATaGCATCACTCTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGQPCR*HHSVGR
Trigger: ACGACCTACAGAGTGATGCCATCTACAAGGCTGACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGATCCTGGACTTTCTTaGTTCTGCGAAGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDPGLS*FCEVLE
Trigger: CTCCAGAACTTCGCAGAATCAAGAAAGTCCAGGATC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACATGGCTGTGTTCTTaGCGGCTTGGACAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTWLCS*RLGQVQ
Trigger: CTGAACTTGTCCAAGCCGTCAAGAACACAGCCATGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACATGGCTGTGTTCTTaGCGGCTTGGACAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTWLCS*RLGQVQ
Trigger: CTGAACTTGTCCAAGCCGTCAAGAACACAGCCATGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAGCAGTGGGTTCTCTaGAGCAGGGAGTACATTATA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYEQWVL*SREYII
Trigger: TATAATGTACTCCCTGCTTCAGAGAACCCACTGCTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGAAGGGTGTCAAGTTaGTACTTGGGGGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRRVSS*YLGVSQ
Trigger: CTGTGAGACCCCCAAGTATCAACTTGACACCCTTCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGCTTTGTGTTCTGCTaGGCCAAAACCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCFVFC*AKTMPM
Trigger: CATGGGCATGGTTTTGGCTCAGCAGAACACAAAGCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGCTTTGTGTTCTGCTaGGCCAAAACCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCFVFC*AKTMPM
Trigger: CATGGGCATGGTTTTGGCTCAGCAGAACACAAAGCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTGCAGCAGTCACACTaGACATATCCAGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLQQSH*TYPGVC
Trigger: ACACACCCCTGGATATGTTCAGTGTGACTGCTGCAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTGCAGCAGTCACACTaGACATATCCAGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLQQSH*TYPGVC
Trigger: ACACACCCCTGGATATGTTCAGTGTGACTGCTGCAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGGAGTGTCAGGCATaGCATGAATGCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLECQA*HECWSC
Trigger: ACAAGACCAGCATTCATGTCATGCCTGACACTCCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGATGGCATCAGGCTTaGGATCATAGCCTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRWHQA*DHSLSS
Trigger: AGACGAAAGGCTATGATCTCAAGCCTGATGCCATCG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATCCAATGCCCTTCATaGAGTCGGCATAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIQCPS*SRHSLP
Trigger: AGGCAGACTATGCCGACTTCATGAAGGGCATTGGAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTAGTTGGTGTTGGTaGTGTTGGCTTGCGCATCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCSWCW*CWLAHP
Trigger: AGGATGCGCAAGCCAACATCACCAACACCAACTACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGATGTACTTGTGAATaGGGCGCTTGTAGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGCTCE*GACSWC
Trigger: ACACCAACTACAAGCGCCTCATTCACAAGTACATCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGTCAGGGATGCTGGTaGACTTATTTCTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRQGCW*TYFCLE
Trigger: CTCCAGACAGAAATAAGTTCACCAGCATCCCTGACG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGTCAGGGATGCTGGTaGACTTATTTCTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRQGCW*TYFCLE
Trigger: CTCCAGACAGAAATAAGTTCACCAGCATCCCTGACG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCATGATGTGGATCTaGGTCTTGTCCTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGMMWI*VLSLSQ
Trigger: TTGGGACAAGGACAAGACTCAGATCCACATCATGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCATGATGTGGATCTaGGTCTTGTCCTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGMMWI*VLSLSQ
Trigger: TTGGGACAAGGACAAGACTCAGATCCACATCATGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGCATGATGTGGATCTaGGTCTTGTCCTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGMMWI*VLSLSQ
Trigger: TTGGGACAAGGACAAGACTCAGATCCACATCATGCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGCCTTTCAGCCACTaGAGATCAGCCTTGTACACA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMPFSH*RSALYT
Trigger: TGTGTACAAGGCTGATCTTCAGTGGCTGAAAGGCAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGTCACTCAGGATCTaGGTGGCTCGTTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWSLRI*VARLFF
Trigger: GAAAAACAAACGAGCCACTCAGATCCTGAGTGACCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGACTCTCGCTGTAGTTaGTTCTGTTCTGCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDSRCS*FCSALP
Trigger: TGGCAAGGCAGAACAGAATCAACTACAGCGAGAGTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGCCCTCTTGGCTTTaGCAACTTCCAAGGAACCAA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWPSWL*QLPRNQ
Trigger: TTGGTTCCTTGGAAGTTGTCAAAGCCAAGAGGGCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGGCCCTCTTGGCTTTaGCAACTTCCAAGGAACCAA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGWPSWL*QLPRNQ
Trigger: TTGGTTCCTTGGAAGTTGTCAAAGCCAAGAGGGCCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTACTCCCTTTCATTCTaGATCTTGCCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYSLSF*ILPAMR
Trigger: CCTCATCGCTGGCAAGATTCAGAATGAAAGGGAGTA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTAATCGATGTCACTaGCAAGGTTCTGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGNRCH*QGSALP
Trigger: AGGAAGGGCAGAACCTTGTCAGTGACATCGATTACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTAATCGATGTCACTaGCAAGGTTCTGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGNRCH*QGSALP
Trigger: AGGAAGGGCAGAACCTTGTCAGTGACATCGATTACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGCTGTACAGACTCTTaGGGTGCTTGGTTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCCTDS*GAWFCR
Trigger: ACGACAGAACCAAGCACCTCAAGAGTCTGTACAGCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGCTGTACAGACTCTTaGGGTGCTTGGTTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCCTDS*GAWFCR
Trigger: ACGACAGAACCAAGCACCTCAAGAGTCTGTACAGCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTAGTCGATCTCGCTaGCTTTCTTCTGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGSRSR*LSSESP
Trigger: AGGACTCTCAGAAGAAAGTCAGCGAGATCGACTACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCCTTTCAGCCAGGTaGGGTCATCCTTGTATACAA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCLSAR*GHPCIQ
Trigger: TTGTATACAAGGATGACCTCACCTGGCTGAAAGGCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTCTTGTGTCTTCTTaGCTTGGCGGATTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLLVSS*LGGFQV
Trigger: CACCTGAAATCCGCCAAGTCAAGAAGACACAAGAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCTGTGACTTTGCGATaGTACACAATGTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSVTLR*YTMSRA
Trigger: CGCCCTGGACATTGTGTATCATCGCAAAGTCACAGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTCTTTATCGTCAGTaGCAGAAAGCTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCLYRQ*QKACSP
Trigger: AGGGCTGCAAGCTTTCTGTCACTGACGATAAAGACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGCAGACTTCGGGATTaGATGTTGTCTTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCRLRD*MLSSAG
Trigger: TCCGGCAGAAGACAACATTCAATCCCGAAGTCTGCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGTTGCTGTGGGAGCTaGGTGGTTTTCACATGTTTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRCCGS*VVFTCL
Trigger: CAAACATGTGAAAACCACTCAGCTCCCACAGCAACG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGTTGCTGTGGGAGCTaGGTGGTTTTCACATGTTTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRCCGS*VVFTCL
Trigger: CAAACATGTGAAAACCACTCAGCTCCCACAGCAACG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGTTGCTGTGGGAGCTaGGTGGTTTTCACATGTTTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRCCGS*VVFTCL
Trigger: CAAACATGTGAAAACCACTCAGCTCCCACAGCAACG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGGGGAAGAAGCCTTTaGCTCTGTCCTCTTCATACT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGGRSL*LCPLHT
Trigger: AGTATGAAGAGGACAGAGGCAAAGGCTTCTTCCCCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGGGGAAGAAGCCTTTaGCTCTGTCCTCTTCATACT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGGRSL*LCPLHT
Trigger: AGTATGAAGAGGACAGAGGCAAAGGCTTCTTCCCCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGGGTCTTCAAAGCTaGCTACGTAGTGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMGLQS*LRSGPT
Trigger: TGTTGGGCCACTACGTAGGCAGCTTTGAAGACCCAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGGGTCTTCAAAGCTaGCTACGTAGTGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMGLQS*LRSGPT
Trigger: TGTTGGGCCACTACGTAGGCAGCTTTGAAGACCCAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATATCACTGGCTTGCTaGGTGTTCTGCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRISLAC*VFCFAC
Trigger: GCAGGCAAAGCAGAACACGCAGCAAGCCAGTGATAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCCCCAGCTTTCTTTaGCTTCTCTACCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLPSFL*LLYLQG
Trigger: TCCTTGGAGGTAGAGAAGGCAAAGAAAGCTGGGGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTCCCCAGCTTTCTTTaGCTTCTCTACCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLPSFL*LLYLQG
Trigger: TCCTTGGAGGTAGAGAAGGCAAAGAAAGCTGGGGAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCAGCTTCTCGGGGTaGTGGCGATACTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFSFSG*WRYFLS
Trigger: TGAGAGAAAGTATCGCCAGCACCCCGAGAAGCTGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCAGCTTCTCGGGGTaGTGGCGATACTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFSFSG*WRYFLS
Trigger: TGAGAGAAAGTATCGCCAGCACCCCGAGAAGCTGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTTGCAGCCTTTATTaGGATGGCATCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLCSLY*DGIRLE
Trigger: CTCAAGCCTGATGCCATCGCAATAAAGGCTGCAAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATCTCTGGAGGCCTTTaGAGCCTTTATTGCGATGGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRISGGL*SLYCDG
Trigger: GCCATCGCAATAAAGGCTGCAAAGGCCTCCAGAGAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAGCTCGATGTTCATTaGGTCTGGGAGGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQLDVH*VWEEDV
Trigger: TACATCCTCCTCCCAGACGCAATGAACATCGAGCTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCTGGCATATTCCGTTaGTTTCTTGGCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRAGIFR*FLGLLH
Trigger: GTGGAGAAGGCCAAGAAAGCAACGGAATATGCCAGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCTGGCATATTCCGTTaGTTTCTTGGCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVAGIFR*FLGLLH
Trigger: GTGGAGAAGGCCAAGAAAGCAACGGAATATGCCAGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCGGGATGCTTTTGCTaGTTTGATTGGAATGGCGTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPGCFC*FDWNGV
Trigger: GACGCCATTCCAATCAAAGCAGCAAAAGCATCCCGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACCGGGATGCTTTTGCTaGTTTGATTGGAATGGCGTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGPGCFC*FDWNGV
Trigger: GACGCCATTCCAATCAAAGCAGCAAAAGCATCCCGG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCCCGGGATGCTTTTaGTGCTTTGATTGGAATGGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLPGCF*CFDWNG
Trigger: GCCATTCCAATCAAAGCAGCAAAAGCATCCCGGGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCAATCTCCCGGGATaGTTTTGCTGCTTTGATTGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGNLPG*FCCFDW
Trigger: CCAATCAAAGCAGCAAAAGCATCCCGGGAGATTGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTCGCTCAGGATCTCTaGAGCTCTCTTACACTTGAC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVAQDL*SSLTLD
Trigger: GTCAAGTGTAAGAGAGCTGCAGAGATCCTGAGCGAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGATTCTGTTCTGCCTTaGCAGCATAATCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDSVLP*QHNLRC
Trigger: ACACCGGAGATTATGCTGGCAAGGCAGAACAGAATC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTACTCACGGTCACTCTaGACTTTGGCAATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYSRSL*TLAMWR
Trigger: CCTCCACATTGCCAAAGTGCAGAGTGACCGTGAGTA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCTTTGCCAGCACCTaGTCCAGCGAGTCGGTTATA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFFAST*SSESVI
Trigger: TATAACCGACTCGCTGGAGCAGGTGCTGGCAAAGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGATTGCATTATTCTTTaGCAGCACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDCIIL*QHLLQR
Trigger: TCGCTGGAGCAGGTGCTGGCAAAGAATAATGCAATC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACTCAGGATTTCACCTaGTCTCTTCACCTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTQDFT*SLHLLD
Trigger: GTCGAGAAGGTGAAGAGAGCAGGTGAAATCCTGAGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACTGTAAATCTTCCCTaGGTGCATGGCGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTVNLP*VHGAKD
Trigger: ATCCTTTGCGCCATGCACGCAGGGAAGATTTACAGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCCATTTGGCCCACTaGAGCCTGTACTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFHLAH*SLYSLS
Trigger: TGAAAGGGAGTACAGGCTGCAGTGGGCCAAATGGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCCATTTGGCCCACTaGAGCCTGTACTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFHLAH*SLYSLS
Trigger: TGAAAGGGAGTACAGGCTGCAGTGGGCCAAATGGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTTCTGAATCTGGCCTaGGTGCTCAAACCAAACCAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVLNLA*VLKPNQ
Trigger: CTGGTTTGGTTTGAGCACGCAGGCCAGATTCAGAAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATATGGCTGGCCAGGTaGTTCTGGTTCTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIWLAR*FWFLAC
Trigger: ACATGCCAAGAACCAGAAGCACCTGGCCAGCCATAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACCAGCTCACTCAGATaGGTCTTCAGTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTSSLR*VFSSCT
Trigger: AGTGCAGGAACTGAAGACGCATCTGAGTGAGCTGGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACCAGCTCACTCAGATaGGTCTTCAGTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTSSLR*VFSSCT
Trigger: AGTGCAGGAACTGAAGACGCATCTGAGTGAGCTGGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGACTTCTGCTTCTTaGCTGAGGCTCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWTSAS*LRLCTP
Trigger: TGGTGTACAGAGCCTCAGGCAAGAAGCAGAAGTCCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGACTTCTGCTTCTTaGCTGAGGCTCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWTSAS*LRLCTP
Trigger: TGGTGTACAGAGCCTCAGGCAAGAAGCAGAAGTCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCACTTTGCGGACATaGAGCAGCATGGGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFTLRT*SSMGVS
Trigger: TGACACACCCATGCTGCTGCATGTCCGCAAAGTGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTTCATCCTTCACTTTaGGGACATGCAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLHPSL*GHAAAW
Trigger: CCATGCTGCTGCATGTCCGCAAAGTGAAGGATGAAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGACGTGCTTGGTCACTaGCTTGACGTGAACTGTATC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRDVLGH*LDVNCI
Trigger: GATACAGTTCACGTCAAGGCAGTGACCAAGCACGTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGACGTGCTTGGTCACTaGCTTGACGTGAACTGTATC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDVLGH*LDVNCI
Trigger: GATACAGTTCACGTCAAGGCAGTGACCAAGCACGTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGACGTGCTTGGTCACTaGCTTGACGTGAACTGTATC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDVLGH*LDVNCI
Trigger: GATACAGTTCACGTCAAGGCAGTGACCAAGCACGTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGTGGTCCTGCGTTTaGTTCACTCTGAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMWSCV*FTLSIS
Trigger: TGAGATGCTCAGAGTGAAGCAAACGCAGGACCACAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGAGCTAATGTGGTCCTaGGTTTGCTTCACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRELMWS*VCFTLS
Trigger: GCTCAGAGTGAAGCAAACGCAGGACCACATTAGCTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAAGGGTGTGGGGGTTaGTTTCCCCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGEGCGG*FPHVLF
Trigger: AAAGAGAACATGGGGAAAGCAACCCCCACACCCTTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAGGACAGTGTTGTCTaGTGGGTGGCAACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVEDSVV*WVATED
Trigger: ATCTTCAGTTGCCACCCAGCAGACAACACTGTCCTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGAGGACAGTGTTGTCTaGTGGGTGGCAACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCREDSVV*WVATED
Trigger: ATCTTCAGTTGCCACCCAGCAGACAACACTGTCCTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAGGACAGTGTTGTCTaGTGGGTGGCAACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGEDSVV*WVATED
Trigger: ATCTTCAGTTGCCACCCAGCAGACAACACTGTCCTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTAAGGGGGTCCCCTTaGTCAGGTTCTCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVRGSP*SGSLCT
Trigger: TGTACAAAGAGAACCTGAGCAAGGGGACCCCCTTAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTGTTCTTGACGGCTTaGACAAGTTCAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVFLTA*TSSGAS
Trigger: TGATGCCCCTGAACTTGTCCAAGCCGTCAAGAACAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTGTTCTTGACGGCTTaGACAAGTTCAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVFLTA*TSSGAS
Trigger: TGATGCCCCTGAACTTGTCCAAGCCGTCAAGAACAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTTTGGAATTGACCTaGGCTTGCACCAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCLELT*ACTRTG
Trigger: TCCTGTCCTGGTGCAAGCCCAGGTCAATTCCAAACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCCGGTGCATCTGCTaGCACGCTGCACTTGAATTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFRCIC*HAALEF
Trigger: AAATTCAAGTGCAGCGTGCCAGCAGATGCACCGGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTAGCTTGGGTGACTTaGATCATGTCAAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLAWVT*IMSRGA
Trigger: AGCCCCTCTTGACATGATCCAAGTCACCCAAGCTAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCGCTCCTCTGGGCCTaGTTAATTTTAGACTGCACT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLLWA*LILDCT
Trigger: AGTGCAGTCTAAAATTAACCAGGCCCAGAGGAGCGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCCTGGAGAAACTGTaGGAGATCAGGATTCAGAGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGLEKL*EIRIQS
Trigger: ACTCTGAATCCTGATCTCCCACAGTTTCTCCAGGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCCTGGAGAAACTGTaGGAGATCAGGATTCAGAGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGLEKL*EIRIQS
Trigger: ACTCTGAATCCTGATCTCCCACAGTTTCTCCAGGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCATTGCACTTGGCCTaGAGAAACTGTGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRALHLA*RNCGRS
Trigger: TGATCTCCCACAGTTTCTCCAGGCCAAGTGCAATGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTAAGCATTGCACTTaGCCTGGAGAAACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCKHCT*PGETVG
Trigger: TCCCACAGTTTCTCCAGGCCAAGTGCAATGCTTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTATAATGGACCAACTTaGGGTCGTCCTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYNGPT*GRPGGF
Trigger: GAAGCCTCCAGGACGACCCCAAGTTGGTCCATTATA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACAGCAACGATGGGAATaGCATCTGGTCTCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGQQRWE*HLVSSR
Trigger: ACGACTTGAGACCAGATGCCATTCCCATCGTTGCTG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAGCAACGATGGGAATaGCATCTGGTCTCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQQRWE*HLVSSR
Trigger: ACGACTTGAGACCAGATGCCATTCCCATCGTTGCTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTACCGGGTCTTGCTaGCCTCATATCCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGTGSC*PHIPSY
Trigger: ATAAGAAGGGATATGAGGCCAGCAAGACCCGGTACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCACTCTGGATTTGCATaGCATTCCTGGAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHSGFA*HSWSVP
Trigger: TGGAACACTCCAGGAATGCCATGCAAATCCAGAGTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGAGAGCAAGATGTCTaGAGTGTCAGGCATGACATG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGEQDV*SVRHDM
Trigger: CATGTCATGCCTGACACTCCAGACATCTTGCTCTCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGTCCACCGGGGTGTaGAAAGATGTCTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMSTGV*KDVLDF
Trigger: GAAATCCAAGACATCTTTCCACACCCCGGTGGACAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGATGTTCATTGCGTCTaGGAGGAGGATGTACTTGTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDVHCV*EEDVLV
Trigger: CACAAGTACATCCTCCTCCCAGACGCAATGAACATC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGGACCACATCATCTTaGGATCATCATGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGTTSS*DHHVSL
Trigger: GAGCGATACATGATGATCCCAAGATGATGTGGTCCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCACTTTGGCAATGTaGAGGGACCACATCATCTTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCTLAM*RDHIIL
Trigger: CAAGATGATGTGGTCCCTCCACATTGCCAAAGTGCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTGTCTGGCATGACATaGATGGAGGCTTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVSGMT*MEALSA
Trigger: TGCTGACAAAGCCTCCATCCATGTCATGCCAGACAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTGTCTGGCATGACATaGATGGAGGCTTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVSGMT*MEALSA
Trigger: TGCTGACAAAGCCTCCATCCATGTCATGCCAGACAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACTTGGTCTTCCATTTaGCCCACTGCAGCCTGTACT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTWSSI*PTAACT
Trigger: AGTACAGGCTGCAGTGGGCCAAATGGAAGACCAAGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACTTGGTCTTCCATTTaGCCCACTGCAGCCTGTACT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTWSSI*PTAACT
Trigger: AGTACAGGCTGCAGTGGGCCAAATGGAAGACCAAGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCAGTGTGCAGCAGTaGGGTTTCTGTAAGGGTATA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGSVQQ*GFCKGI
Trigger: TATACCCTTACAGAAACCCCACTGCTGCACACTGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGCAGTGTGCAGCAGTaGGGTTTCTGTAAGGGTATA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGSVQQ*GFCKGI
Trigger: TATACCCTTACAGAAACCCCACTGCTGCACACTGCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCAGAATGTAGCCTGTaGCTTTCTGTTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRAECSL*LSVSPS
Trigger: GCTGGGAGAAACAGAAAGCCACAGGCTACATTCTGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTTTCCCCATGTCTTTaGAGTGGGAGATGTATGGTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVSPCL*SGRCMV
Trigger: CACCATACATCTCCCACTCCAAAGACATGGGGAAAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGAAATCCAGGCAGTaGACCACACCAGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWKSRQ*TTPGNS
Trigger: TGAGTTTCCTGGTGTGGTCCACTGCCTGGATTTCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTCTTCGCCAGCACGTaGTTCATCATGTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLFAST*FIMSLG
Trigger: TCCCAATGACATGATGAACCACGTGCTGGCGAAGAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCTTCGCCAGCACGTaGTTCATCATGTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLFAST*FIMSLG
Trigger: TCCCAATGACATGATGAACCACGTGCTGGCGAAGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTCTTCGCCAGCACGTaGTTCATCATGTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLFAST*FIMSLG
Trigger: TCCCAATGACATGATGAACCACGTGCTGGCGAAGAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCAGGTTATAGCTGGTaGCTTTCACCTTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVAGYSW*LSPYPR
Trigger: CCTGGGATAAGGTGAAAGCCACCAGCTATAACCTGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCAGGTTATAGCTGGTaGCTTTCACCTTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGAGYSW*LSPYPR
Trigger: CCTGGGATAAGGTGAAAGCCACCAGCTATAACCTGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTCGGTATTTGATATaGCTGGCCAGGTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSRYLI*LARCFW
Trigger: CCAGAAGCACCTGGCCAGCCATATCAAATACCGAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCTCGGTATTTGATATaGCTGGCCAGGTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSRYLI*LARCFW
Trigger: CCAGAAGCACCTGGCCAGCCATATCAAATACCGAGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACACCGCGCTGTGTTTaGATCGTCGTCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTPRCV*IVVNTF
Trigger: AAAAGTGTTGACGACGATCCAAACACAGCGCGGTGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTTCTGAGAGTCCTTaGCAGTCACCATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSSESP*QSPSPP
Trigger: TGGTGGAGATGGTGACTGCCAAGGACTCTCAGAAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTTCTGAGAGTCCTTaGCAGTCACCATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSSESP*QSPSPP
Trigger: TGGTGGAGATGGTGACTGCCAAGGACTCTCAGAAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACACCGTTTTTGTAGTTaGGGCCACTTTGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGHRFCS*GHFASD
Trigger: GTCAGAGGCAAAGTGGCCCCAACTACAAAAACGGTG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAAACGGGACATCCTTaGGTCCAAGTGTGTACCCAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQTGHP*VQVCTH
Trigger: ATGGGTACACACTTGGACCCAAGGATGTCCCGTTTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACAAACGGGACATCCTTaGGTCCAAGTGTGTACCCAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGQTGHP*VQVCTH
Trigger: ATGGGTACACACTTGGACCCAAGGATGTCCCGTTTG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTGACTCTCCGGACATaGACAAACGGGACATCCTTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLTLRT*TNGTSL
Trigger: CAAGGATGTCCCGTTTGTCCATGTCCGGAGAGTCAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTGACTCTCCGGACATaGACAAACGGGACATCCTTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLTLRT*TNGTSL
Trigger: CAAGGATGTCCCGTTTGTCCATGTCCGGAGAGTCAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCCTGTATTTGATCTaGCTGATCTGGTCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFLYLI*LIWSPA
Trigger: CGCAGGCGACCAGATCAGCCAGATCAAATACAGGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCCTGTATTTGATCTaGCTGATCTGGTCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFLYLI*LIWSPA
Trigger: CGCAGGCGACCAGATCAGCCAGATCAAATACAGGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCCGGTCAGCCACTGTaGTGTAATGCAGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRAGQPL*CNADSL
Trigger: AAGAGAATCTGCATTACACCACAGTGGCTGACCGGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCCGGTCAGCCACTGTaGTGTAATGCAGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGAGQPL*CNADSL
Trigger: AAGAGAATCTGCATTACACCACAGTGGCTGACCGGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCAGTCACAGGTTTGTaGAGTTTCTTCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSVTGL*SFFRSA
Trigger: GGCTGACCTGAAGAAACTCCACAAACCTGTGACTGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATACTCTGCAGCTCTGTaGCTTCTCTGTGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYSAAL*LLCGVA
Trigger: AGCTACACCACAGAGAAGCCACAGAGCTGCAGAGTA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTACTCTGCAGCTCTGTaGCTTCTCTGTGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYSAAL*LLCGVA
Trigger: AGCTACACCACAGAGAAGCCACAGAGCTGCAGAGTA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTGAGTGGCATTCTTaGCTCTCAGCATGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSEWHS*LSACQE
Trigger: CTCCTGACATGCTGAGAGCCAAGAATGCCACTCAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGGCTGAAGTTCTTCTaGTTCTCGCGGACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRLKFF*FSRTLC
Trigger: GCAAAGAGTCCGCGAGAACCAGAAGAACTTCAGCCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAGCTAATGTGCTTCTaGGTCTCCTTGACGCGTTTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGELMCF*VSLTRF
Trigger: GAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGGGTCTGTCACCACTaGTGTAAAGCAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRVCHH*CKAAFV
Trigger: CACAAAGGCTGCTTTACACCAGTGGTGACAGACCCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTGTTGTCTGCTGGGTaGCAACTGAAGATGACCGTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVLSAG*QLKMTV
Trigger: AACGGTCATCTTCAGTTGCCACCCAGCAGACAACAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTCAGCCTTGTAGATaGCATCACTCTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGQPCR*HHSVGR
Trigger: ACGACCTACAGAGTGATGCCATCTACAAGGCTGACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTCAGCCTTGTAGATaGCATCACTCTGCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGQPCR*HHSAVR
Trigger: ACGAACTGCAGAGTGATGCCATCTACAAGGCTGACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075301.10
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGATTTATATTTCCTCTaGCTGATCTGGTCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDLYFL*LIWSPA
Trigger: CGCAGGCGACCAGATCAGCCAGAGGAAATATAAATC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTGTTTCGGTCTGCATaGAGTAGATCTGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVFRSA*SRSGLS
Trigger: TGAAAGACCAGATCTACTTCATGCAGACCGAAACAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAGCAGTGGGTTCTCTaGAGCAGGGAGTACATTATA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVEQWVL*SREYII
Trigger: TATAATGTACTCCCTGCTTCAGAGAACCCACTGCTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGGTCTCACAGTAATTaGTGCTCCTTGCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGSHSN*CSLLWS
Trigger: AGACCAAAGCAAGGAGCATCAATTACTGTGAGACCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGGTCTCACAGTAATTaGTGCTCCTTGCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGSHSN*CSLLWS
Trigger: AGACCAAAGCAAGGAGCATCAATTACTGTGAGACCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGGAGCATCTTCAATTaGGGTAAACTTGAGCGTATC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGSIFN*GKLERI
Trigger: GATACGCTCAAGTTTACCTCAATTGAAGATGCTCCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGCTTAGGGTCATCCTaGAGACTGAGAAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLGSS*RLRKPI
Trigger: AATTGGCTTTCTCAGTCTTCAGGATGACCCTAAGCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTGGTCGCAACTTCCTaGGATTTCTTTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLVATS*DFFAAV
Trigger: GACTGCTGCAAAGAAATCTCAGGAAGTTGCGACCAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTGGTCGCAACTTCCTaGGATTTCTTTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLVATS*DFFAAV
Trigger: GACTGCTGCAAAGAAATCTCAGGAAGTTGCGACCAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTGTCAGGCATGACATaGATGCTGGTCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVSGMT*MLVLSL
Trigger: CAAAGACAAGACCAGCATTCATGTCATGCCTGACAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTGTCAGGCATGACATaGATGCTGGTCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVSGMT*MLVLSL
Trigger: CAAAGACAAGACCAGCATTCATGTCATGCCTGACAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAATTGCATCCGTTCTaGGGTCATAGCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYELHPF*GHSLSF
Trigger: GAAAGAAAGGCTATGACCTCAGAACGGATGCAATTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGATGTACTTGTGAATaGGGCGCTTGTAGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGCTCE*GACSWC
Trigger: ACACCAACTACAAGCGCCTCATTCACAAGTACATCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCATCTTGCACACTaGGGAATCCAATATGGTGTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGHLAH*GIQYGV
Trigger: GACACCATATTGGATTCCTCAGTGTGCAAGATGACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTCATCTTGCACACTaGGGAATCCAATATGGTGTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGHLAH*GIQYGV
Trigger: GACACCATATTGGATTCCTCAGTGTGCAAGATGACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGCTTTTGCTGCTTTaGTTGGAATGGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMLLLL*LEWRPQ
Trigger: CTGTGGACGCCATTCCAATCAAAGCAGCAAAAGCAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGCTTTTGCTGCTTTaGTTGGAATGGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMLLLL*LEWRPQ
Trigger: CTGTGGACGCCATTCCAATCAAAGCAGCAAAAGCAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGCTTTTGCTGCTTTaGTTGGAATGGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMLLLL*LEWRPQ
Trigger: CTGTGGACGCCATTCCAATCAAAGCAGCAAAAGCAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGCCTTTCAGCCACTaGAGATCAGCCTTGTACACA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMPFSH*RSALYT
Trigger: TGTGTACAAGGCTGATCTTCAGTGGCTGAAAGGCAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCATTCGCGCCAACATaGTTTCTGGTGTATCTGGCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSFAPT*FLVYLA
Trigger: TGCCAGATACACCAGAAATCATGTTGGCGCGAATGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGTCGGTTATACTGGTaGATTTCAGTGTGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSRLYW*ISVCRD
Trigger: GTCCCGACACACTGAAATTCACCAGTATAACCGACT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGTCGGTTATACTGGTaGATTTCAGTGTGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSRLYW*ISVCRD
Trigger: GTCCCGACACACTGAAATTCACCAGTATAACCGACT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTTCTTGTGTCTTCTTaGCTTGGCGGATTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLLVSS*LGGFQV
Trigger: CACCTGAAATCCGCCAAGTCAAGAAGACACAAGAAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTCTTTATCGTCAGTaGCAGAAAGCTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCLYRQ*QKACSP
Trigger: AGGGCTGCAAGCTTTCTGTCACTGACGATAAAGACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTCTTTATCGTCAGTaGCAGAAAGCTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCLYRQ*QKACSP
Trigger: AGGGCTGCAAGCTTTCTGTCACTGACGATAAAGACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTATTAAGGAATTCCTaGGGGCCAGCACCATGTCTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLLRNS*GPAPCL
Trigger: AAGACATGGTGCTGGCCCTCAGGAATTCCTTAATAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTATTAAGGAATTCCTaGGGGCCAGCACCATGTCTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLLRNS*GPAPCL
Trigger: AAGACATGGTGCTGGCCCTCAGGAATTCCTTAATAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCAGCCTTATATTTaGCCTCGCTTGCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGQPYI*PRLQGC
Trigger: ACAACCTTGCAAGCGAGGTCAAATATAAGGCTGACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTCAGCCTTATATTTaGCCTCGCTTGCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGQPYI*PRLQGC
Trigger: ACAACCTTGCAAGCGAGGTCAAATATAAGGCTGACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAGACTCTTTGGCAGTaGTGTATGTTGGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYETLWQ*CMLESQ
Trigger: TTGAGACTCCAACATACATCACTGCCAAAGAGTCTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCTCATTGAGGATCTaGGTGGCATTCTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFSLRI*VAFLAL
Trigger: GAGAGCCAAGAATGCCACTCAGATCCTCAATGAGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCTCATTGAGGATCTaGGTGGCATTCTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFSLRI*VAFLAL
Trigger: GAGAGCCAAGAATGCCACTCAGATCCTCAATGAGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGCACTGGCAGATCTTaGCTGGTCCCGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACTGRS*LVPAPA
Trigger: CGCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGCACTGGCAGATCTTaGCTGGTCCCGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICTGRS*LVPAPA
Trigger: CGCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGGCACCGATCATCTTaGCTTTGCTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGHRSS*LCSSHS
Trigger: ACTATGAGAAGAGCAAAGGCAAGATGATCGGTGCCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTTCTGAAGCCAACGTaGTTTCCCTTTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLLKPT*FPFAFS
Trigger: TGAGAAGGCAAAGGGAAAGCACGTTGGCTTCAGAAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAAAGCCAATTTGCTTaGCTCTGGCTTTCTCATAGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYESQFA*LWLSHR
Trigger: CCTATGAGAAAGCCAGAGGCAAGCAAATTGGCTTTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTGCGGAAGCCAATGTaGTTCCCTTTGGATTGTTCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLRKPM*FPLDCS
Trigger: TGAACAATCCAAAGGGAAGCACATTGGCTTCCGCAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGCGGAAGCCAATGTaGTTCCCTTTGGATTGTTCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLRKPM*FPLDCS
Trigger: TGAACAATCCAAAGGGAAGCACATTGGCTTCCGCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAAGGTATCCAGCCAATaGCTTTCAGCCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYKVSSQ*LSATED
Trigger: ATCTTCAGTGGCTGAAAGGCATTGGCTGGATACCTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTACTTGAAGTCACTTaGAATGTCCCTGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVLEVT*NVPGGL
Trigger: AAGGCCTCCAGGGACATTGCAAGTGACTTCAAGTAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTACTTGAAGTCACTTaGAATGTCCCTGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVLEVT*NVPGGL
Trigger: AAGGCCTCCAGGGACATTGCAAGTGACTTCAAGTAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTACTTGAAGTCACTTaGAATGTCCCTGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVLEVT*NVPGGL
Trigger: AAGGCCTCCAGGGACATTGCAAGTGACTTCAAGTAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATTCTGTTCTGCCTTaGCAGCATAATCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDSVLP*QHNLRC
Trigger: ACACCGGAGATTATGCTGGCAAGGCAGAACAGAATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCATGTCCACAGGGCTaGTGTATCTTGTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYACPQG*CILSCI
Trigger: AATACAAGACAAGATACAGCAGCCCTGTGGACATGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGATTGCATTATTCTTTaGCAGCACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRDCIIL*QHLLQR
Trigger: TCGCTGGAGCAGGTGCTGGCAAAGAATAATGCAATC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATTGCATTATTCTTTaGCAGCACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDCIIL*QHLLQR
Trigger: TCGCTGGAGCAGGTGCTGGCAAAGAATAATGCAATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACTCAGGATTTCACCTaGTCTCTTCACCTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTQDFT*SLHLLD
Trigger: GTCGAGAAGGTGAAGAGAGCAGGTGAAATCCTGAGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACTGTAAATCTTCCCTaGGTGCATGGCGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTVNLP*VHGAKD
Trigger: ATCCTTTGCGCCATGCACGCAGGGAAGATTTACAGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACTGTAAATCTTCCCTaGGTGCATGGCGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTVNLP*VHGAKD
Trigger: ATCCTTTGCGCCATGCACGCAGGGAAGATTTACAGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGCACTTCTTCGAATaGAGGATAGAAAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWHFFE*RIESMS
Trigger: GGACATGCTTTCTATCCTGCATTCGAAGAAGTGCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCTCGCTGCTTAACGTaGTCAGCTTTGTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPRCLT*SALYFS
Trigger: GCTGAAATACAAAGCTGAGCACGTTAAGCAGCGAGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCACCAGGTCAGCATaGTTGGCTCCAACAATTGGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFTRSA*LAPTIG
Trigger: TCCAATTGTTGGAGCCAAGCATGCTGACCTGGTGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCACCAGGTCAGCATaGTTGGCTCCAACAATTGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFTRSA*LAPTIG
Trigger: TCCAATTGTTGGAGCCAAGCATGCTGACCTGGTGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTATTCAAAGTCACTCTaGTGGAGAGATGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYSKSL*WRDDLA
Trigger: GGCCAAGTCATCTCTCCAGCAGAGTGACTTTGAATA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGTGGTCCTGCGTTTaGTTCACTCTGAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMWSCV*FTLSIS
Trigger: TGAGATGCTCAGAGTGAAGCAAACGCAGGACCACAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGTGGTCCTGCGTTTaGTTCACTCTGAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMWSCV*FTLSIS
Trigger: TGAGATGCTCAGAGTGAAGCAAACGCAGGACCACAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAACTTTGTCTTATCTaGGTGGACTTTGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYELCLI*VDFVGV
Trigger: CACGCCTACAAAGTCCACCCAGATAAGACAAAGTTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCATTGACTCTGTGCTaGATGAATTCCGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGALTLC*MNSGAS
Trigger: AGATGCACCGGAATTCATCCAGCACAGAGTCAATGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCATTGACTCTGTGCTaGATGAATTCCGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRALTLC*MNSGAS
Trigger: AGATGCACCGGAATTCATCCAGCACAGAGTCAATGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTAGCTTGGGTGACTTaGATCATGTCAAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLAWVT*IMSRGA
Trigger: AGCCCCTCTTGACATGATCCAAGTCACCCAAGCTAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATATAGTCCACGTCGCTaGCAATCGCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYSPRR*QSPEIS
Trigger: AGAAATCTCAGGCGATTGCCAGCGACGTGGACTATA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTATAGTCCACGTCGCTaGCAATCGCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYSPRR*QSPEIS
Trigger: AGAAATCTCAGGCGATTGCCAGCGACGTGGACTATA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCGCTCCTCTGGGCCTaGTTAATTTTAGACTGCACT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSLLWA*LILDCT
Trigger: AGTGCAGTCTAAAATTAACCAGGCCCAGAGGAGCGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGTTTAGGATCGTCTTaGAGACTTTGGAATCCGACC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLGSS*RLWNPT
Trigger: GGTCGGATTCCAAAGTCTCCAAGACGATCCTAAACT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTAAGCATTGCACTTaGCCTGGAGAAACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCKHCT*PGETVG
Trigger: TCCCACAGTTTCTCCAGGCCAAGTGCAATGCTTACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACATGCCCATGGAGTCTaGCACACTTGTGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGHAHGV*HTCELD
Trigger: ATCAAGTTCACAAGTGTGCCAGACTCCATGGGCATG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATGCCCATGGAGTCTaGCACACTTGTGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHAHGV*HTCELD
Trigger: ATCAAGTTCACAAGTGTGCCAGACTCCATGGGCATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCAAGTCGTAACCCTTaGCCAGCGTTTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSSRNP*PAFSSS
Trigger: ACTGGAAGAAAACGCTGGCCAAGGGTTACGACTTGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCAAGTCGTAACCCTTaGCCAGCGTTTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSSRNP*PAFSSS
Trigger: ACTGGAAGAAAACGCTGGCCAAGGGTTACGACTTGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATGGGAATGGCATCTaGTCTCAAGTCGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDGNGI*SQVVTL
Trigger: AAGGGTTACGACTTGAGACCAGATGCCATTCCCATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGATGGGAATGGCATCTaGTCTCAAGTCGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDGNGI*SQVVTL
Trigger: AAGGGTTACGACTTGAGACCAGATGCCATTCCCATC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTTCCTTGAACTTTTaGCAGCAACGATGGGAATGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCSLNF*QQRWEW
Trigger: CCATTCCCATCGTTGCTGCCAAAAGTTCAAGGAACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTTGCATGGCATTCCTaGAGTGTTCCACATTCAAGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFAWHS*SVPHSR
Trigger: CCTTGAATGTGGAACACTCCAGGAATGCCATGCAAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGTCCACCGGGGTGTaGAAAGATGTCTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMSTGV*KDVLDF
Trigger: GAAATCCAAGACATCTTTCCACACCCCGGTGGACAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGTCCACCGGGGTGTaGAAAGATGTCTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMSTGV*KDVLDF
Trigger: GAAATCCAAGACATCTTTCCACACCCCGGTGGACAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGAATGGACTAATTTaGGATCATCCTCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWNGLI*DHPPDC
Trigger: GCAGTCTGGAGGATGATCCCAAATTAGTCCATTCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGGAGTATGGTAGCTaGTCTTCGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQEYGS*SSSSHS
Trigger: ACTATGAGAAGACGAAGACCAGCTACCATACTCCTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATGTTCATTGCGTCTaGGAGGAGGATGTACTTGTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDVHCV*EEDVLV
Trigger: CACAAGTACATCCTCCTCCCAGACGCAATGAACATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTCAACTTTTTAAACTaGAAGGTGCTGGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVNFLN*KVLGCC
Trigger: GCAGCATCCCAGCACCTTCCAGTTTAAAAAGTTGAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGAGGAATCCAATATaGTGTCCCAGTTGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLRNPI*CPSCFR
Trigger: CCGGAAACAACTGGGACACCATATTGGATTCCTCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTTCTGTCTGGAGGTTaGCGGTATTTCTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFLSGG*RYFFSL
Trigger: CAGTGAGAAGAAATACCGCCAACCTCCAGACAGAAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTTTGCTGCTTTGATTaGAATGGCGTCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFCCFD*NGVHRK
Trigger: CTTCCTGTGGACGCCATTCCAATCAAAGCAGCAAAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAACTTCAGGGGTATCTaGCATAATGTGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYNFRGI*HNVDSG
Trigger: ACCACTGTCCACATTATGCCAGATACCCCTGAAGTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGCCTCTCATCCACTaGAGGTCAGACTTGTACATA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMPLIH*RSDLYI
Trigger: TATGTACAAGTCTGACCTCCAGTGGATGAGAGGCAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGGACCACATCATCTTaGGATCATCATGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGTTSS*DHHVSL
Trigger: GAGCGATACATGATGATCCCAAGATGATGTGGTCCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGGACCACATCATCTTaGGATCATCATGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGTTSS*DHHVSL
Trigger: GAGCGATACATGATGATCCCAAGATGATGTGGTCCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGCACTTTGGCAATGTaGAGGGACCACATCATCTTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCTLAM*RDHIIL
Trigger: CAAGATGATGTGGTCCCTCCACATTGCCAAAGTGCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGCACTTTGGCAATGTaGAGGGACCACATCATCTTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCTLAM*RDHIIL
Trigger: CAAGATGATGTGGTCCCTCCACATTGCCAAAGTGCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTCTGGGCTCCGATGTaGTGGCCTTTTTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLWAPM*WPFCFS
Trigger: TGAAAAACAAAAAGGCCACCACATCGGAGCCCAGAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCTGGGCTCCGATGTaGTGGCCTTTTTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLWAPM*WPFCFS
Trigger: TGAAAAACAAAAAGGCCACCACATCGGAGCCCAGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCCAGGACAACTTCTaGAGTATCAACAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCQDNF*SINNGG
Trigger: ACCTCCATTGTTGATACTCCAGAAGTTGTCCTGGCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCACAGAGGATCTCCTaGGCATTTTTGACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSQRIS*AFLTLR
Trigger: CCTGAGAGTCAAAAATGCCCAGGAGATCCTCTGTGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCACAGAGGATCTCCTaGGCATTTTTGACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSQRIS*AFLTLR
Trigger: CCTGAGAGTCAAAAATGCCCAGGAGATCCTCTGTGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTATTTATAGTCACTaGCAATCTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCIYSH*QSPWRP
Trigger: AGGCCTCCAGGGAGATTGCCAGTGACTATAAATACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATCCGGGCAGCCTCCTaGGCAGTGTGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIRAAS*AVCSSG
Trigger: CCCACTGCTGCACACTGCCCAGGAGGCTGCCCGGAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTGTAACCCTCACATaGTCCACAGAATCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFVTLT*STESRG
Trigger: CCCTCTGGATTCTGTGGACCATGTGAGGGTTACAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTGTAACCCTCACATaGTCCACAGAATCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFVTLT*STESRG
Trigger: CCCTCTGGATTCTGTGGACCATGTGAGGGTTACAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCCATGTCTTTGGAGTaGGAGATGTATGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPMSLE*EMYGVS
Trigger: AGACACACCATACATCTCCCACTCCAAAGACATGGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTTTCCCCATGTCTTTaGAGTGGGAGATGTATGGTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVSPCL*SGRCMV
Trigger: CACCATACATCTCCCACTCCAAAGACATGGGGAAAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTCATATGATTTCTTaGCATGGAGAATCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGHMIS*HGESGV
Trigger: CACCCCAGATTCTCCATGCCAAGAAATCATATGACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACACCGCGCTGTGTTTaGATCGTCGTCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTPRCV*IVVNTF
Trigger: AAAAGTGTTGACGACGATCCAAACACAGCGCGGTGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACACCGCGCTGTGTTTaGATCGTCGTCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTPRCV*IVVNTF
Trigger: AAAAGTGTTGACGACGATCCAAACACAGCGCGGTGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACTTGTAAGTCAGGGTaGCAAATCCACTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTCKSG*QIHSWR
Trigger: CCTCCATGAGTGGATTTGCCACCCTGACTTACAAGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACTTGTAAGTCAGGGTaGCAAATCCACTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTCKSG*QIHSWR
Trigger: CCTCCATGAGTGGATTTGCCACCCTGACTTACAAGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACAATGTCGCTGATCTaGTCTGTCACTTTTCTGACG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTMSLI*SVTFLT
Trigger: CGTCAGAAAAGTGACAGACCAGATCAGCGACATTGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTGTCTTCTTGACTTaGCGGATTTCAGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCVFLT*RISGVS
Trigger: AGACACACCTGAAATCCGCCAAGTCAAGAAGACACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTAGCCTCTTGGTCTaGCCTTGTTGTATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCSLLV*PCCIPV
Trigger: AACTGGAATACAACAAGGCCAGACCAAGAGGCTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTTCGGGTTGTATTTaGGTGTTTTGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLSGCI*VFCPSP
Trigger: AGGAGAAGGGCAAAACACCCAAATACAACCCGAAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCAGTCACAGGTTTGTaGAGTTTCTTCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSVTGL*SFFRSA
Trigger: GGCTGACCTGAAGAAACTCCACAAACCTGTGACTGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCAGTCACAGGTTTGTaGAGTTTCTTCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSVTGL*SFFRSA
Trigger: GGCTGACCTGAAGAAACTCCACAAACCTGTGACTGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCTCAAAGTCCAGCATaGGCTTGCCTCGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSQSPA*ACLVLF
Trigger: AAAAAGAACGAGGCAAGCCCATGCTGGACTTTGAGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGAGTGACAGGCGTTaGTGTTGCTTTTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWSDRR*CCFSHV
Trigger: AACATGAGAAAAGCAACACCAACGCCTGTCACTCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTCTTGGTTGCGTTTaGCTCTCTCCATGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFLGCV*LSPCLE
Trigger: CTCCAGACATGGAGAGAGCCAAACGCAACCAAGAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTTCTTGGTTGCGTTTaGCTCTCTCCATGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFLGCV*LSPCLE
Trigger: CTCCAGACATGGAGAGAGCCAAACGCAACCAAGAAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGATGGCATTCAGTTTaGACTGCAACATCACAGGTA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGWHSV*TATSQV
Trigger: TACCTGTGATGTTGCAGTCCAAACTGAATGCCATCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTACAGGTAGTCACTaGCAATATCCCGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCTGSH*QYPEKP
Trigger: AGGCTTCTCGGGATATTGCCAGTGACTACCTGTACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTACAGGTAGTCACTaGCAATATCCCGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCTGSH*QYPEKP
Trigger: AGGCTTCTCGGGATATTGCCAGTGACTACCTGTACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTATAAAACCTTGCTaGCTTGCTGCGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCIKPC*LAATLS
Trigger: AGAAAGTGTCGCAGCAAGTCAGCAAGGTTTTATACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTCCTGATACTTCCTTaGGCTGAGATTGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFLILP*AEIVSI
Trigger: AATGCTGACAATCTCAGCTCAAGGAAGTATCAGGAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTGTTTCGGTCTGCATaGAGTAGATCTGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVFRSA*SRSGLS
Trigger: TGAAAGACCAGATCTACTTCATGCAGACCGAAACAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTGTTTCGGTCTGCATaGAGTAGATCTGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVFRSA*SRSGLS
Trigger: TGAAAGACCAGATCTACTTCATGCAGACCGAAACAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTATAGTTTATCACTaGGGACGTTTCCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCIVYH*GRFQLS
Trigger: AGACAGCTGGAAACGTCCTCAGTGATAAACTATACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGAGAGTCTGTGACTTaGGTGAACTTTGTCTTATCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGESVT*VNFVLS
Trigger: AGATAAGACAAAGTTCACTCAAGTCACAGACTCTCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGGAGCATCTTCAATTaGGGTAAACTTGAGCGTATC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGSIFN*GKLERI
Trigger: GATACGCTCAAGTTTACCTCAATTGAAGATGCTCCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTAGTTGGTATTGCTaGTCACATCCTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCSWYC*SHPVPS
Trigger: AGAAGGCACAGGATGTGATCAGCAATACCAACTACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTAGTTGGTATTGCTaGTCACATCCTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCSWYC*SHPVPS
Trigger: AGAAGGCACAGGATGTGATCAGCAATACCAACTACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGCTTAGGGTCATCCTaGAGACTGAGAAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSLGSS*RLRKPI
Trigger: AATTGGCTTTCTCAGTCTTCAGGATGACCCTAAGCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGGGGATATCAGGCATaGTGTGGATTTTTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRGYQA*CGFLSC
Trigger: ACAAGACAAAAATCCACATCATGCCTGATATCCCCG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAATTGCATCCGTTCTaGGGTCATAGCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGELHPF*GHSLSF
Trigger: GAAAGAAAGGCTATGACCTCAGAACGGATGCAATTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTCACTGATGATTTCTaGAGCCCGCTTGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLTDDF*SPLVLF
Trigger: GAAAAGAACAAGCGGGCTTCAGAAATCATCAGTGAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCACTGATGATTTCTaGAGCCCGCTTGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLTDDF*SPLVLF
Trigger: GAAAAGAACAAGCGGGCTTCAGAAATCATCAGTGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCATCCACTGGAGATCTaGCTTGTACACATTATCACT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHPLEI*LVHIIT
Trigger: AGTGATAATGTGTACAAGTCAGATCTCCAGTGGATG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATAGTCCTTCATCTTTaGTTCATCCCATCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIVLHL*FIPSLG
Trigger: ACCAAGGGATGGGATGAATCAAAGATGAAGGACTAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTATTCCAGGCTTCCTaGTACAGCCTCTCACTCATT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLFQAS*YSLSLI
Trigger: AATGAGTGAGAGGCTGTATCAGGAAGCCTGGAATAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCATGTTTGGCATGATTaGCAGAGACAGAATCATTCG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHVWHD*QRQNHS
Trigger: CGAATGATTCTGTCTCTGTCAATCATGCCAAACATG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCAGCATGTTTGGCATaGTTGACAGAGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVAACLA*LTETES
Trigger: TGATTCTGTCTCTGTCAATCATGCCAAACATGCTGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCAGCATGTTTGGCATaGTTGACAGAGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGAACLA*LTETES
Trigger: TGATTCTGTCTCTGTCAATCATGCCAAACATGCTGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTCACTTTTCTGACGTaGCTGTTGACTTGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVTFLT*LLTCKS
Trigger: TGACTTACAAGTCAACAGTCACGTCAGAAAAGTGAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTACAAATTCTCACTCTaGAGCTTGTATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYKFSL*SLYAWR
Trigger: CCTCCATGCATACAAGCTTCAGAGTGAGAATTTGTA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTACCCATTTGCCTTaGTGTGTTCATAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCTHLP*CVHRLL
Trigger: AAGAAGCCTATGAACACATCAAGGCAAATGGGTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTAGATCAACTCACTaGCAGCTTCTTGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCRSTH*QLLVSS
Trigger: AGAAGACACAAGAAGCTGTCAGTGAGTTGATCTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTGGCCCTGCATCTTaGAGAAGTCTGATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCGPAS*RSLICR
Trigger: TCTACAAATCAGACTTCTTCAAGATGCAGGGCCACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTGGCCCTGCATCTTaGAGAAGTCTGATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCGPAS*RSLICR
Trigger: TCTACAAATCAGACTTCTTCAAGATGCAGGGCCACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTGGCCCTGCATCTTaGAGAAGTCTGATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCGPAS*RSLICR
Trigger: TCTACAAATCAGACTTCTTCAAGATGCAGGGCCACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCGCTGCTTTGATATaGACAGCATCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFAALI*TASGLM
Trigger: CATCAAGCCAGATGCTGTTCATATCAAAGCAGCGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCGCTGCTTTGATATaGACAGCATCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFAALI*TASGLM
Trigger: CATCAAGCCAGATGCTGTTCATATCAAAGCAGCGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCGCTGCTTTGATATaGACAGCATCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFAALI*TASGLM
Trigger: CATCAAGCCAGATGCTGTTCATATCAAAGCAGCGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGTCCAGATTTGTGTTaGCTTTGTAGGCATCTTTCG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSPDLC*LCRHLS
Trigger: CGAAAGATGCCTACAAAGTCAACACAAATCTGGACT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGAGACTCTTTGGCAGTaGTGTATGTTGGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRETLWQ*CMLESQ
Trigger: TTGAGACTCCAACATACATCACTGCCAAAGAGTCTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAGACTCTTTGGCAGTaGTGTATGTTGGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGETLWQ*CMLESQ
Trigger: TTGAGACTCCAACATACATCACTGCCAAAGAGTCTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAGACTCTTTGGCAGTaGTGTATGTTGGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVETLWQ*CMLESQ
Trigger: TTGAGACTCCAACATACATCACTGCCAAAGAGTCTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGGTTCTTCACTTGCTaGGCATGGATAATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRFFTC*AWIISG
Trigger: CCCAGAAATTATCCATGCTCAGCAAGTGAAGAACCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGATATTTCACTGTTaGGATGTGCCGTTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMIFHC*DVPLGF
Trigger: GAAACCCAACGGCACATCTCAACAGTGAAATATCAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACCTGTAATGGTATCTTaGTCCTGGTCATTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGPVMVS*SWSFRF
Trigger: AAAGCGGAATGACCAGGATCAAGATACCATTACAGG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCTGTAATGGTATCTTaGTCCTGGTCATTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPVMVS*SWSFRF
Trigger: AAAGCGGAATGACCAGGATCAAGATACCATTACAGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCTGTAATGGTATCTTaGTCCTGGTCATTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPVMVS*SWSFRF
Trigger: AAAGCGGAATGACCAGGATCAAGATACCATTACAGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACCTTGCTGACTTGCTaGGACACTTTCTTAGCATGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTLLTC*DTFLAC
Trigger: ACATGCTAAGAAAGTGTCGCAGCAAGTCAGCAAGGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAAAACCTTGCTGACTTaGTGCGACACTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYKTLLT*CDTFLA
Trigger: TGCTAAGAAAGTGTCGCAGCAAGTCAGCAAGGTTTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAAACAATGCCTTGTCTaGTTCCCAGTCTTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYKQCLV*FPVFSV
Trigger: TACACTGAAGACTGGGAAGCAGACAAGGCATTGTTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAGCAGAAACCTTCATaGAGTGTGTATGGTATGGGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVEQKPS*SVYGMG
Trigger: ACCCATACCATACACACTGCATGAAGGTTTCTGCTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAGCAGAAACCTTCATaGAGTGTGTATGGTATGGGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGEQKPS*SVYGMG
Trigger: ACCCATACCATACACACTGCATGAAGGTTTCTGCTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCGGAATCCAGCCAATaGCCTTCATCCAGGTATTAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSESSQ*PSSRYY
Trigger: ATAATACCTGGATGAAGGGCATTGGCTGGATTCCGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCGGAATCCAGCCAATaGCCTTCATCCAGGTATTAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSESSQ*PSSRYY
Trigger: ATAATACCTGGATGAAGGGCATTGGCTGGATTCCGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACTCAGGGCATCCCCTaGCTTTTTAACTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTQGIP*LFNFLL
Trigger: CAAGAGAAAGTTAAAAAGGCAGGGGATGCCCTGAGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACTCAGGGCATCCCCTaGCTTTTTAACTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTQGIP*LFNFLL
Trigger: CAAGAGAAAGTTAAAAAGGCAGGGGATGCCCTGAGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTACTCTCGATCAGACTaGATCTTAGCCACTTGCATG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYSRSD*ILATCM
Trigger: CATGCAAGTGGCTAAGATGCAGTCTGATCGAGAGTA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATACTCTCGATCAGACTaGATCTTAGCCACTTGCATG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYSRSD*ILATCM
Trigger: CATGCAAGTGGCTAAGATGCAGTCTGATCGAGAGTA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGCTTTGGGTCATCTTaGACACTGAGGAATCCAATA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSFGSS*TLRNPI
Trigger: TATTGGATTCCTCAGTGTGCAAGATGACCCAAAGCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAAGGTATCCAGCCAATaGCTTTCAGCCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRKVSSQ*LSATED
Trigger: ATCTTCAGTGGCTGAAAGGCATTGGCTGGATACCTT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCATGTCCACAGGGCTaGTGTATCTTGTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRACPQG*CILSCI
Trigger: AATACAAGACAAGATACAGCAGCCCTGTGGACATGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCATGTCCACAGGGCTaGTGTATCTTGTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGACPQG*CILSCI
Trigger: AATACAAGACAAGATACAGCAGCCCTGTGGACATGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGATGGCATTACTCTTTaGCAGGACAATTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDGITL*QDNFWG
Trigger: ACCCCAGAAATTGTCCTGGCAAAGAGTAATGCCATC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGATTTCAATGGCATCTaGTCGCAAGTCGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDFNGI*SQVVAF
Trigger: AAAGGCTACGACTTGCGAGCAGATGCCATTGAAATC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGATTTCAATGGCATCTaGTCGCAAGTCGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRDFNGI*SQVVAF
Trigger: AAAGGCTACGACTTGCGAGCAGATGCCATTGAAATC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTAGGCATCTTTCGCTaGTTTGATATGAACAGCATC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVGIFR*FDMNSI
Trigger: GATGCTGTTCATATCAAAGCAGCGAAAGATGCCTAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGTCCACTTCCAGTATaGTTTATTGGCTTCGTACTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRPLPV*FIGFVL
Trigger: CAGTACGAAGCCAATAAAGCATACTGGAAGTGGACG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGTCCACTTCCAGTATaGTTTATTGGCTTCGTACTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRPLPV*FIGFVL
Trigger: CAGTACGAAGCCAATAAAGCATACTGGAAGTGGACG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGTCCACTTCCAGTATaGTTTATTGGCTTCGTACTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRPLPV*FIGFVL
Trigger: CAGTACGAAGCCAATAAAGCATACTGGAAGTGGACG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTATTCAAAGTCACTCTaGTGGAGAGATGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYSKSL*WRDDLA
Trigger: GGCCAAGTCATCTCTCCAGCAGAGTGACTTTGAATA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATATTCAAAGTCACTCTaGTGGAGAGATGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYSKSL*WRDDLA
Trigger: GGCCAAGTCATCTCTCCAGCAGAGTGACTTTGAATA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTATTTAGGACGTGGTaGATTATCAGAGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVFRTW*IIRDSF
Trigger: GAAGGAGTCTCTGATAATGCACCACGTCCTAAATAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATATTTCACGATACTCTaGAGCTCTGTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYFTIL*SSVASL
Trigger: CAGAGAAGCCACAGAGCTGCAGAGTATCGTGAAATA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATATTTCACGATACTCTaGAGCTCTGTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYFTIL*SSVASL
Trigger: CAGAGAAGCCACAGAGCTGCAGAGTATCGTGAAATA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGTCCAGCATGGGCTTaGCTCGTTCTTTTTCATATT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSPAWA*LVLFHI
Trigger: AATATGAAAAAGAACGAGGCAAGCCCATGCTGGACT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCCATTTCTGCCGATTaGTTGTACTTAATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSISAD*LYLIWL
Trigger: CAGCCAGATTAAGTACAAGCAATCGGCAGAAATGGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGACAGGCGTTGGTGTTaGTTTTCTCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDRRWC*FSHVLF
Trigger: AAAGAGAACATGAGAAAAGCAACACCAACGCCTGTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTAATTGTCTCTCCTaGCACCTCTTCGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCNCLS*HLFVNC
Trigger: ACAGTTTACGAAGAGGTGCCAGGAGAGACAATTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATTCTGCGAAGTTCTaGAGTATCACTTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDSAKF*SITCDG
Trigger: GCCATCACAAGTGATACTCCAGAACTTCGCAGAATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTTGGTTACTTTCTTaGCAAATTCGACCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGWLLS*QIRPQE
Trigger: CTCCTGAGGTCGAATTTGCCAAGAAAGTAACCAACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAACTTTGTCTTATCTaGGTGGACTTTGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVELCLI*VDFVGV
Trigger: CACGCCTACAAAGTCCACCCAGATAAGACAAAGTTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCAATATCGCTCCTCTaGGCCTGGTTAATTTTAGAC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVAISLL*AWLILD
Trigger: GTCTAAAATTAACCAGGCCCAGAGGAGCGATATTGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAATTTCCTCCCCCTTaGCTTTGTAAGCAATATCGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGEFPPP*LCKQYR
Trigger: GCGATATTGCTTACAAAGCCAAGGGGGAGGAAATTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGAATTTCCTCCCCCTTaGCTTTGTAAGCAATATCGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCREFPPP*LCKQYR
Trigger: GCGATATTGCTTACAAAGCCAAGGGGGAGGAAATTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCGTCTTGGAGACTTTaGAATCCGACCATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSSWRL*NPTIFP
Trigger: AGGGAAAATGGTCGGATTCCAAAGTCTCCAAGACGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCGTCTTGGAGACTTTaGAATCCGACCATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSSWRL*NPTIFP
Trigger: AGGGAAAATGGTCGGATTCCAAAGTCTCCAAGACGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGTTTAGGATCGTCTTaGAGACTTTGGAATCCGACC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSLGSS*RLWNPT
Trigger: GGTCGGATTCCAAAGTCTCCAAGACGATCCTAAACT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGACATTGTTGCCTTTaGCTATTAAGTCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGHCCL*LLSHAS
Trigger: ACTGGCATGACTTAATAGCCAAAGGCAACAATGTCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTTCCTTGAACTTTTaGCAGCAACGATGGGAATGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCSLNF*QQRWEW
Trigger: CCATTCCCATCGTTGCTGCCAAAAGTTCAAGGAACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTTCCTTGAACTTTTaGCAGCAACGATGGGAATGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCSLNF*QQRWEW
Trigger: CCATTCCCATCGTTGCTGCCAAAAGTTCAAGGAACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTGCATGGCATTCCTaGAGTGTTCCACATTCAAGG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFAWHS*SVPHSR
Trigger: CCTTGAATGTGGAACACTCCAGGAATGCCATGCAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTACTTGTAATCACTaGCAATATCTCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCTCNH*QYLWRP
Trigger: AGGCCTCCAGAGATATTGCCAGTGATTACAAGTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAATGTGCTTCCCTTTaGATTGTTCATAGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQCASL*IVHRLA
Trigger: AGCAAGCCTATGAACAATCCAAAGGGAAGCACATTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGGAATGGACTAATTTaGGATCATCCTCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGWNGLI*DHPPDC
Trigger: GCAGTCTGGAGGATGATCCCAAATTAGTCCATTCCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGAATGGACTAATTTaGGATCATCCTCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWNGLI*DHPPDC
Trigger: GCAGTCTGGAGGATGATCCCAAATTAGTCCATTCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAGGAGTATGGTAGCTaGTCTTCGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQEYGS*SSSSHS
Trigger: ACTATGAGAAGACGAAGACCAGCTACCATACTCCTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTCAACTTTTTAAACTaGAAGGTGCTGGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVNFLN*KVLGCC
Trigger: GCAGCATCCCAGCACCTTCCAGTTTAAAAAGTTGAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTCAACTTTTTAAACTaGAAGGTGCTGGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVNFLN*KVLGCC
Trigger: GCAGCATCCCAGCACCTTCCAGTTTAAAAAGTTGAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCTTGCAAAATATCTaGTGTATCCGGCATCACATG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGLQNI*CIRHHM
Trigger: CATGTGATGCCGGATACACCAGATATTTTGCAAGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTCTGTCTGGAGGTTaGCGGTATTTCTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFLSGG*RYFFSL
Trigger: CAGTGAGAAGAAATACCGCCAACCTCCAGACAGAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTTGCTGCTTTGATTaGAATGGCGTCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFCCFD*NGVHRK
Trigger: CTTCCTGTGGACGCCATTCCAATCAAAGCAGCAAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTTGCTGCTTTGATTaGAATGGCGTCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFCCFD*NGVHRK
Trigger: CTTCCTGTGGACGCCATTCCAATCAAAGCAGCAAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTATTTGTATTCACTaGCAATCTCCCGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCICIH*QSPGML
Trigger: AAGCATCCCGGGAGATTGCCAGTGAATACAAATACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTTTGCCAAGACCATTaGCATGGAGTCCATAAGGCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFCQDH*HGVHKA
Trigger: AGCCTTATGGACTCCATGCCAATGGTCTTGGCAAAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAACTTCAGGGGTATCTaGCATAATGTGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVNFRGI*HNVDSG
Trigger: ACCACTGTCCACATTATGCCAGATACCCCTGAAGTT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGACCACATCATCTTaGGGTCATCATGTATACCAC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWTTSS*GHHVYH
Trigger: GTGGTATACATGATGACCCCAAGATGATGTGGTCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGGACCACATCATCTTaGGGTCATCATGTATACCAC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGWTTSS*GHHVYH
Trigger: GTGGTATACATGATGACCCCAAGATGATGTGGTCCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGCCTCTCATCCACTaGAGGTCAGACTTGTACATA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMPLIH*RSDLYI
Trigger: TATGTACAAGTCTGACCTCCAGTGGATGAGAGGCAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGCCTCTCATCCACTaGAGGTCAGACTTGTACATA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMPLIH*RSDLYI
Trigger: TATGTACAAGTCTGACCTCCAGTGGATGAGAGGCAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAGCCACAATGGGAATaGCATCACTTCTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQPQWE*HHFSSH
Trigger: ATGACTTGAGAAGTGATGCCATTCCCATTGTGGCTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAGCCACAATGGGAATaGCATCACTTCTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQPQWE*HHFSSH
Trigger: ATGACTTGAGAAGTGATGCCATTCCCATTGTGGCTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTGTCTGGCATGACATaGATCGTTTTCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVSGMT*IVFLSL
Trigger: CAATGACAAGAAAACGATCCATGTCATGCCAGACAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTATATTTGTAATCACTaGCAATGTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYICNH*QCPWRP
Trigger: AGGCCTCCAGGGACATTGCCAGTGATTACAAATATA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTATTTATAGTCACTaGCAATCTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCIYSH*QSPWRP
Trigger: AGGCCTCCAGGGAGATTGCCAGTGACTATAAATACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTATTTATAGTCACTaGCAATCTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCIYSH*QSPWRP
Trigger: AGGCCTCCAGGGAGATTGCCAGTGACTATAAATACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGAGTGGGAGATGTATaGTGTGTCTGGAGAAAATAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGVGDV*CVWRKY
Trigger: ATATTTTCTCCAGACACACCATACATCTCCCACTCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTTGGCTCCAACAATTaGAATATAGCGCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLGSNN*NIALIQ
Trigger: CTGGATGAGCGCTATATTCCAATTGTTGGAGCCAAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTTGGCTCCAACAATTaGAATATAGCGCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLGSNN*NIALIQ
Trigger: CTGGATGAGCGCTATATTCCAATTGTTGGAGCCAAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACCAGGTCAGCATGCTTaGCTCCAACAATTGGAATAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGPGQHA*LQQLEY
Trigger: ATATTCCAATTGTTGGAGCCAAGCATGCTGACCTGG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCAGGTCAGCATGCTTaGCTCCAACAATTGGAATAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPGQHA*LQQLEY
Trigger: ATATTCCAATTGTTGGAGCCAAGCATGCTGACCTGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATATGATTTCTTGGCATaGAGAATCTGGGGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYDFLA*RIWGVS
Trigger: GGACACACCCCAGATTCTCCATGCCAAGAAATCATA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTCATATGATTTCTTaGCATGGAGAATCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGHMIS*HGESGV
Trigger: CACCCCAGATTCTCCATGCCAAGAAATCATATGACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCATATGATTTCTTaGCATGGAGAATCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGHMIS*HGESGV
Trigger: CACCCCAGATTCTCCATGCCAAGAAATCATATGACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTCATATGATTTCTTaGCATGGAGAATCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGHMIS*HGESGV
Trigger: CACCCCAGATTCTCCATGCCAAGAAATCATATGACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACAATGTCGCTGATCTaGTCTGTCACTTTTCTGACG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTMSLI*SVTFLT
Trigger: CGTCAGAAAAGTGACAGACCAGATCAGCGACATTGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACAATGTCGCTGATCTaGTCTGTCACTTTTCTGACG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTMSLI*SVTFLT
Trigger: CGTCAGAAAAGTGACAGACCAGATCAGCGACATTGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACAATGTCGCTGATCTaGTCTGTCACTTTTCTGACG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTMSLI*SVTFLT
Trigger: CGTCAGAAAAGTGACAGACCAGATCAGCGACATTGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTGTCTTCTTGACTTaGCGGATTTCAGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCVFLT*RISGVS
Trigger: AGACACACCTGAAATCCGCCAAGTCAAGAAGACACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTGTCTTCTTGACTTaGCGGATTTCAGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCVFLT*RISGVS
Trigger: AGACACACCTGAAATCCGCCAAGTCAAGAAGACACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTAGCCTCTTGGTCTaGCCTTGTTGTATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCSLLV*PCCIPV
Trigger: AACTGGAATACAACAAGGCCAGACCAAGAGGCTACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGATATGAACAGCATCTaGCTTGATGGTGCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDMNSI*LDGAVR
Trigger: TCTAACTGCACCATCAAGCCAGATGCTGTTCATATC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTTTCGGGTTGTATTTaGGTGTTTTGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLSGCI*VFCPSP
Trigger: AGGAGAAGGGCAAAACACCCAAATACAACCCGAAAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTTTCGGGTTGTATTTaGGTGTTTTGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLSGCI*VFCPSP
Trigger: AGGAGAAGGGCAAAACACCCAAATACAACCCGAAAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTCAAAGTCCAGCATaGGCTTGCCTCGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSQSPA*ACLVLF
Trigger: AAAAAGAACGAGGCAAGCCCATGCTGGACTTTGAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTCAAAGTCCAGCATaGGCTTGCCTCGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSQSPA*ACLVLF
Trigger: AAAAAGAACGAGGCAAGCCCATGCTGGACTTTGAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCAGTGATGTATGTTaGAGTCTCAAAGTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGSDVC*SLKVQH
Trigger: ATGCTGGACTTTGAGACTCCAACATACATCACTGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGCAGTGATGTATGTTaGAGTCTCAAAGTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGSDVC*SLKVQH
Trigger: ATGCTGGACTTTGAGACTCCAACATACATCACTGCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGGAGTGACAGGCGTTaGTGTTGCTTTTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGWSDRR*CCFSHV
Trigger: AACATGAGAAAAGCAACACCAACGCCTGTCACTCCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGATGGCATTCAGTTTaGACTGCAACATCACAGGTA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGWHSV*TATSQV
Trigger: TACCTGTGATGTTGCAGTCCAAACTGAATGCCATCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
3UTR CAA 72 bp TGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTaGCAGATACTGCAGACTGATGGAGGTCTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: CTEVSTEMLPAE*QILQTDGGLEV
Trigger: CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTATAAAACCTTGCTaGCTTGCTGCGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCIKPC*LAATLS
Trigger: AGAAAGTGTCGCAGCAAGTCAGCAAGGTTTTATACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTATAAAACCTTGCTaGCTTGCTGCGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCIKPC*LAATLS
Trigger: AGAAAGTGTCGCAGCAAGTCAGCAAGGTTTTATACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTATAAAACCTTGCTaGCTTGCTGCGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCIKPC*LAATLS
Trigger: AGAAAGTGTCGCAGCAAGTCAGCAAGGTTTTATACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCCTGATACTTCCTTaGGCTGAGATTGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFLILP*AEIVSI
Trigger: AATGCTGACAATCTCAGCTCAAGGAAGTATCAGGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCCTGATACTTCCTTaGGCTGAGATTGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFLILP*AEIVSI
Trigger: AATGCTGACAATCTCAGCTCAAGGAAGTATCAGGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCTCAAAGTCTTCCTaGTACTTCCTTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFSKSS*YFLELR
Trigger: TCTCAGCTCAAGGAAGTATCAGGAAGACTTTGAGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTATAGTTTATCACTaGGGACGTTTCCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCIVYH*GRFQLS
Trigger: AGACAGCTGGAAACGTCCTCAGTGATAAACTATACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTATAGTTTATCACTaGGGACGTTTCCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCIVYH*GRFQLS
Trigger: AGACAGCTGGAAACGTCCTCAGTGATAAACTATACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTATAGTTTATCACTaGGGACGTTTCCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCIVYH*GRFQLS
Trigger: AGACAGCTGGAAACGTCCTCAGTGATAAACTATACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGAGAGTCTGTGACTTaGGTGAACTTTGTCTTATCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGESVT*VNFVLS
Trigger: AGATAAGACAAAGTTCACTCAAGTCACAGACTCTCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGAGAGTCTGTGACTTaGGTGAACTTTGTCTTATCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGESVT*VNFVLS
Trigger: AGATAAGACAAAGTTCACTCAAGTCACAGACTCTCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTCTTATCACTGTTTTaGGCAGAAACCTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLLSLF*AETFMQ
Trigger: CTGCATGAAGGTTTCTGCTCAAAACAGTGATAAGAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACTTGCAATATCTCTTaGTGCTTTGGCAGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTCNIS*CFGSFD
Trigger: ATCAAAGCTGCCAAAGCATCAAGAGATATTGCAAGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATCCTTGGCTGCTGTaGCGCTCAGCATGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHPWLL*RSACRQ
Trigger: CTGCCGACATGCTGAGCGTCACAGCAGCCAAGGATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTATCCGGCATCACATaGATCTTGGTTTTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVSGIT*ILVLSL
Trigger: TAAAGACAAAACCAAGATTCATGTGATGCCGGATAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCATCCACTGGAGATCTaGCTTGTACACATTATCACT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHPLEI*LVHIIT
Trigger: AGTGATAATGTGTACAAGTCAGATCTCCAGTGGATG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTCGCTTGTTCATGGTaGTTGCATTATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVACSW*LHYSLP
Trigger: TGGCAAAGAATAATGCAATCACCATGAACAAGCGAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTCGCTTGTTCATGGTaGTTGCATTATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVACSW*LHYSLP
Trigger: TGGCAAAGAATAATGCAATCACCATGAACAAGCGAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATAGTCCTTCATCTTTaGTTCATCCCATCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIVLHL*FIPSLG
Trigger: ACCAAGGGATGGGATGAATCAAAGATGAAGGACTAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATGTTTGGCATGATTaGCAGAGACAGAATCATTCG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHVWHD*QRQNHS
Trigger: CGAATGATTCTGTCTCTGTCAATCATGCCAAACATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATTGATTTTGGCCTTTaGCTTATGGTAGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIDFGL*LMVALL
Trigger: AAGGAGAGCTACCATAAGTCAAAGGCCAAAATCAAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACTCTGGAGGTCATATaGTTTCTTGGCATGGAGAAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTLEVI*FLGMEN
Trigger: ATTCTCCATGCCAAGAAATCATATGACCTCCAGAGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACTCTGGAGGTCATATaGTTTCTTGGCATGGAGAAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTLEVI*FLGMEN
Trigger: ATTCTCCATGCCAAGAAATCATATGACCTCCAGAGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTCGGGCACGATGTTaGTTTTCATCTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCRARC*FSSCSS
Trigger: AGAAGAACAAGATGAAAATCAACATCGTGCCCGACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTCGGGCACGATGTTaGTTTTCATCTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCRARC*FSSCSS
Trigger: AGAAGAACAAGATGAAAATCAACATCGTGCCCGACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTCACTTTTCTGACGTaGCTGTTGACTTGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVTFLT*LLTCKS
Trigger: TGACTTACAAGTCAACAGTCACGTCAGAAAAGTGAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTCACTTTTCTGACGTaGCTGTTGACTTGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVTFLT*LLTCKS
Trigger: TGACTTACAAGTCAACAGTCACGTCAGAAAAGTGAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTATACAATGTCGCTaGTCTGGTCTGTCACTTTTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCIQCR*SGLSLF
Trigger: GAAAAGTGACAGACCAGATCAGCGACATTGTATACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTATACAATGTCGCTaGTCTGGTCTGTCACTTTTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCIQCR*SGLSLF
Trigger: GAAAAGTGACAGACCAGATCAGCGACATTGTATACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTGTCTTCTGCACGTaGGCTTTATACTTGATATCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLVFCT*ALYLIS
Trigger: TGATATCAAGTATAAAGCTCACGTGCAGAAGACAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATACAAATTCTCACTCTaGAGCTTGTATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYKFSL*SLYAWR
Trigger: CCTCCATGCATACAAGCTTCAGAGTGAGAATTTGTA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTACCCATTTGCCTTaGTGTGTTCATAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCTHLP*CVHRLL
Trigger: AAGAAGCCTATGAACACATCAAGGCAAATGGGTACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTAGATCAACTCACTaGCAGCTTCTTGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCRSTH*QLLVSS
Trigger: AGAAGACACAAGAAGCTGTCAGTGAGTTGATCTACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTAGATCAACTCACTaGCAGCTTCTTGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCRSTH*QLLVSS
Trigger: AGAAGACACAAGAAGCTGTCAGTGAGTTGATCTACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATATCAGGAACTGAAGTaGAGATGGACTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYQELK*RWTSAS
Trigger: AGAAGCAGAAGTCCATCTTCACTTCAGTTCCTGATA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTATCAGGAACTGAAGTaGAGATGGACTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYQELK*RWTSAS
Trigger: AGAAGCAGAAGTCCATCTTCACTTCAGTTCCTGATA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATATCAGGAACTGAAGTaGAGATGGACTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYQELK*RWTSAS
Trigger: AGAAGCAGAAGTCCATCTTCACTTCAGTTCCTGATA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGTCCAGATTTGTGTTaGCTTTGTAGGCATCTTTCG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSPDLC*LCRHLS
Trigger: CGAAAGATGCCTACAAAGTCAACACAAATCTGGACT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGTCCAGATTTGTGTTaGCTTTGTAGGCATCTTTCG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSPDLC*LCRHLS
Trigger: CGAAAGATGCCTACAAAGTCAACACAAATCTGGACT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGACAGTCTCATAATATaGCATGGACTTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDSLII*HGLLCI
Trigger: GATGCAGAGAAGTCCATGTCATATTATGAGACTGTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGACAGTCTCATAATATaGCATGGACTTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDSLII*HGLLCI
Trigger: GATGCAGAGAAGTCCATGTCATATTATGAGACTGTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATTTCTGGCGTGTCTTaGACAACTGTAATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYISGVS*TTVIFP
Trigger: AGGGAAAATTACAGTTGTTCAAGACACGCCAGAAAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGATATTTCACTGTTaGGATGTGCCGTTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMIFHC*DVPLGF
Trigger: GAAACCCAACGGCACATCTCAACAGTGAAATATCAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATCATAGTCAAAAACTaGACCAGGGTTAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIIVKN*TRVSTP
Trigger: TGGCGTACTAACCCTGGTTCAGTTTTTGACTATGAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATCATAGTCAAAAACTaGACCAGGGTTAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIIVKN*TRVSTP
Trigger: TGGCGTACTAACCCTGGTTCAGTTTTTGACTATGAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTCCTCGCCCCCACTaGTACTCAGTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASPRPH*YSVHWQ
Trigger: CTGCCAGTGCACTGAGTATCAGTGGGGGCGAGGAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCTCCTCGCCCCCACTaGTACTCAGTGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISPRPH*YSVHWQ
Trigger: CTGCCAGTGCACTGAGTATCAGTGGGGGCGAGGAGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGTTTGTAAGCTGTTaGAGTTGCAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMFVSC*SCREEG
Trigger: GCCTTCTTCTCTGCAACTTCAACAGCTTACAAACAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGTTTGTAAGCTGTTaGAGTTGCAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMFVSC*SCREEG
Trigger: GCCTTCTTCTCTGCAACTTCAACAGCTTACAAACAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAAAACCTTGCTGACTTaGTGCGACACTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGKTLLT*CDTFLA
Trigger: TGCTAAGAAAGTGTCGCAGCAAGTCAGCAAGGTTTT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTGTCTTCCCAGTTCTaGTTGTATAAAACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVSSQF*LYKTLL
Trigger: CAGCAAGGTTTTATACAAGCAGAACTGGGAAGACAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTGTCTTCCCAGTTCTaGTTGTATAAAACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVSSQF*LYKTLL
Trigger: CAGCAAGGTTTTATACAAGCAGAACTGGGAAGACAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATAGGGATAAAACAATaGCTTGTCTGCTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIGIKQ*LVCFPV
Trigger: GACTGGGAAGCAGACAAGGCATTGTTTTATCCCTAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATAGGGATAAAACAATaGCTTGTCTGCTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIGIKQ*LVCFPV
Trigger: GACTGGGAAGCAGACAAGGCATTGTTTTATCCCTAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGTGTGTCCGGATGTTaGCTGTATTTCTTTTCACTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSVSGC*LYFFSL
Trigger: GAGTGAAAAGAAATACAGGCAACATCCGGACACACT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAGCCAGGACATTGTTaGCTTTGGCTATTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQPGHC*LWLLSH
Trigger: ATGACTTAATAGCCAAAGGCAACAATGTCCTGGCTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAACGTGCTTTCCCTTTaGCTTCTCATAAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGNVLSL*LLISLF
Trigger: AAAGAGGCTTATGAGAAGGCAAAGGGAAAGCACGTT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAACGTGCTTTCCCTTTaGCTTCTCATAAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRNVLSL*LLISLF
Trigger: AAAGAGGCTTATGAGAAGGCAAAGGGAAAGCACGTT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAACGTGCTTTCCCTTTaGCTTCTCATAAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVNVLSL*LLISLF
Trigger: AAAGAGGCTTATGAGAAGGCAAAGGGAAAGCACGTT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTATCACTCTGGATTTaGATGGCATTCCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLSLWI*MAFLEC
Trigger: ACACTCCAGGAATGCCATGCAAATCCAGAGTGATAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTATCACTCTGGATTTaGATGGCATTCCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLSLWI*MAFLEC
Trigger: ACACTCCAGGAATGCCATGCAAATCCAGAGTGATAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTTGCTTTTGTTAAGTaGCTGTTCCATGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVAFVK*LFHGVH
Trigger: ATGGACACCATGGAACAGGCACTTAACAAAAGCAAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTTGCTTTTGTTAAGTaGCTGTTCCATGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVAFVK*LFHGVH
Trigger: ATGGACACCATGGAACAGGCACTTAACAAAAGCAAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATCGCTCATGTTGATTaGATTTGCTTTGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIAHVD*ICFGQN
Trigger: GTTTTGGCCAAAGCAAATGCAATCAACATGAGCGAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGATCATCCTCCAGACTaGGAAAACCAACCATTTTTC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDHPPD*ENQPFF
Trigger: GAAAAATGGTTGGTTTTCGCAGTCTGGAGGATGATC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATCATCCTCCAGACTaGGAAAACCAACCATTTTTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDHPPD*ENQPFF
Trigger: GAAAAATGGTTGGTTTTCGCAGTCTGGAGGATGATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCATCTTAGCCACTTaGATGGAATGGACTAATTTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCILAT*MEWTNL
Trigger: CAAATTAGTCCATTCCATGCAAGTGGCTAAGATGCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGCTTTGGGTCATCTTaGACACTGAGGAATCCAATA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSFGSS*TLRNPI
Trigger: TATTGGATTCCTCAGTGTGCAAGATGACCCAAAGCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGCTTTGGGTCATCTTaGACACTGAGGAATCCAATA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSFGSS*TLRNPI
Trigger: TATTGGATTCCTCAGTGTGCAAGATGACCCAAAGCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTCAGTGGCCCGTTTaGATTTTTCCACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFQWPV*IFPHPK
Trigger: CTTTGGATGTGGAAAAATGCAAACGGGCCACTGAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCTTGGCCAATACTTaGTCCAGAGAATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFLANT*SRESVT
Trigger: TGTGACTGATTCTCTGGAGCAAGTATTGGCCAAGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCTTGGCCAATACTTaGTCCAGAGAATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFLANT*SRESVT
Trigger: TGTGACTGATTCTCTGGAGCAAGTATTGGCCAAGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTGTTCATGGTGATTaGATTATTCTTTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLVHGD*IILCQH
Trigger: GTGCTGGCAAAGAATAATGCAATCACCATGAACAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTTCTGTATACAAATaGTTGCTCATAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYASVYK*LLIVMA
Trigger: TGCCATCACTATGAGCAAGCATTTGTATACAGAAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGTTTATTGCTAATCTaGAAGGCATTGATTTGGGCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLLLI*KALIWA
Trigger: GGCCCAAATCAATGCCTTGCAGATTAGCAATAAACT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTCATCTTGCAGGCTaGGGAAACCCACGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGHLAG*GNPRGG
Trigger: GCCACCACGTGGGTTTCCGCAGCCTGCAAGATGACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTCACTGAAGATATCTaGAGCATGTTTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLTEDI*SMFGMI
Trigger: AATCATGCCAAACATGCTGCAGATATCTTCAGTGAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCACTGCTCTGTTTTaGTGTCACATAATCCACTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLTALF*CHIIHS
Trigger: AGAGTGGATTATGTGACAGCAAAACAGAGCAGTGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGCCATAGGCCTTGGTaGCCTCCCAGGCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISHRPW*PPRLPC
Trigger: ACAAGGGAGCCTGGGAGGGCACCAAGGCCTATGGCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTCATAAGCATGCTTTaGATGGAGAATTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVISML*MENFRS
Trigger: ACTCCTGAAATTCTCCATGCAAAGCATGCTTATGAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTAGGCATCTTTCGCTaGTTTGATATGAACAGCATC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVGIFR*FDMNSI
Trigger: GATGCTGTTCATATCAAAGCAGCGAAAGATGCCTAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTAGGCATCTTTCGCTaGTTTGATATGAACAGCATC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVGIFR*FDMNSI
Trigger: GATGCTGTTCATATCAAAGCAGCGAAAGATGCCTAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTATTTAGGACGTGGTaGATTATCAGAGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVFRTW*IIRDSF
Trigger: GAAGGAGTCTCTGATAATGCACCACGTCCTAAATAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTATTTAGGACGTGGTaGATTATCAGAGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVFRTW*IIRDSF
Trigger: GAAGGAGTCTCTGATAATGCACCACGTCCTAAATAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGTCCAGCATGGGCTTaGCTCGTTCTTTTTCATATT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSPAWA*LVLFHI
Trigger: AATATGAAAAAGAACGAGGCAAGCCCATGCTGGACT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCCATTTCTGCCGATTaGTTGTACTTAATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSISAD*LYLIWL
Trigger: CAGCCAGATTAAGTACAAGCAATCGGCAGAAATGGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCCATTTCTGCCGATTaGTTGTACTTAATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSISAD*LYLIWL
Trigger: CAGCCAGATTAAGTACAAGCAATCGGCAGAAATGGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCCATTTCTGCCGATTaGTTGTACTTAATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSISAD*LYLIWL
Trigger: CAGCCAGATTAAGTACAAGCAATCGGCAGAAATGGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGTTCCTTGTCCGATTaGTTCTTTATACTTGACCGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSSLSD*FFILDR
Trigger: TCGGTCAAGTATAAAGAAGCAATCGGACAAGGAACT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGACAGGCGTTGGTGTTaGTTTTCTCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDRRWC*FSHVLF
Trigger: AAAGAGAACATGAGAAAAGCAACACCAACGCCTGTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGACAGGCGTTGGTGTTaGTTTTCTCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDRRWC*FSHVLF
Trigger: AAAGAGAACATGAGAAAAGCAACACCAACGCCTGTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTAATTGTCTCTCCTaGCACCTCTTCGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCNCLS*HLFVNC
Trigger: ACAGTTTACGAAGAGGTGCCAGGAGAGACAATTACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAATTTCAAAGCATaGTGTCTCACTCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCNFKA*CLTPFS
Trigger: GGAAAATGGAGTGAGACACCATGCTTTGAAATTGCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTTCCAGCGAGCCGATaGGGATCCACCCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILPASR*GSTQCP
Trigger: AGGGCATTGGGTGGATCCCCATCGGCTCGCTGGAAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTTCCAGCGAGCCGATaGGGATCCACCCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALPASR*GSTQCP
Trigger: AGGGCATTGGGTGGATCCCCATCGGCTCGCTGGAAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATACCTTTCATCCAGTaGGTGAAGTCGGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIPFIQ*VKSDLY
Trigger: ATACAAATCCGACTTCACCCACTGGATGAAAGGTAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCACTCATTGTGATCTaGTTTACTCTGGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSLIVI*FTLESK
Trigger: CTTGCTCTCCAGAGTAAACCAGATCACAATGAGTGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCACTCATTGTGATCTaGTTTACTCTGGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSLIVI*FTLESK
Trigger: CTTGCTCTCCAGAGTAAACCAGATCACAATGAGTGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTACTTGTAATCACTaGCAATATCTCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCTCNH*QYLWRP
Trigger: AGGCCTCCAGAGATATTGCCAGTGATTACAAGTACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAATGTGCTTCCCTTTaGATTGTTCATAGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQCASL*IVHRLA
Trigger: AGCAAGCCTATGAACAATCCAAAGGGAAGCACATTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTGGAAAGATGTCTTaGATTTCTCATAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCGKMS*ISHSPS
Trigger: AGAAGGGCTATGAGAAATCCAAGACATCTTTCCACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTGATTCATGTTCCTaGTCAGCTCGATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCDSCS*SARCSL
Trigger: CAATGAACATCGAGCTGACCAGGAACATGAATCACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTGATTCATGTTCCTaGTCAGCTCGATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCDSCS*SARCSL
Trigger: CAATGAACATCGAGCTGACCAGGAACATGAATCACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTGTTTGATTCTGCTTaGCTTGCAAAATATCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVFDSA*LAKYLV
Trigger: CACCAGATATTTTGCAAGCCAAGCAGAATCAAACAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTATTTGTATTCACTaGCAATCTCCCGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCICIH*QSPGML
Trigger: AAGCATCCCGGGAGATTGCCAGTGAATACAAATACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTATTTGTATTCACTaGCAATCTCCCGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCICIH*QSPGML
Trigger: AAGCATCCCGGGAGATTGCCAGTGAATACAAATACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTATTTGTAGTCACTaGCAATATCTCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCICSH*QYLWRP
Trigger: AGGCCTCCAGAGATATTGCCAGTGACTACAAATACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTATTTGTAGTCACTaGCAATATCTCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCICSH*QYLWRP
Trigger: AGGCCTCCAGAGATATTGCCAGTGACTACAAATACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTACAGATTATCACTCTaGAGGTCATATGCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYRLSL*RSYAFR
Trigger: CCGGAAAGCATATGACCTCCAGAGTGATAATCTGTA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATACAGATTATCACTCTaGAGGTCATATGCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYRLSL*RSYAFR
Trigger: CCGGAAAGCATATGACCTCCAGAGTGATAATCTGTA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGCCAGGACAATTTCTaGGGTGTCTGTAATACATGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCQDNF*GVCNTC
Trigger: ACATGTATTACAGACACCCCAGAAATTGTCCTGGCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATATATTTGTAATCACTaGCAATGTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYICNH*QCPWRP
Trigger: AGGCCTCCAGGGACATTGCCAGTGATTACAAATATA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAATTTCAGGCGTGTCTaGCATTATGTGGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRNFRRV*HYVDGS
Trigger: ACTTCCATCCACATAATGCCAGACACGCCTGAAATT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAATTTCAGGCGTGTCTaGCATTATGTGGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGNFRRV*HYVDGS
Trigger: ACTTCCATCCACATAATGCCAGACACGCCTGAAATT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAATTTCAGGCGTGTCTaGCATTATGTGGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVNFRRV*HYVDGS
Trigger: ACTTCCATCCACATAATGCCAGACACGCCTGAAATT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGATGTATGGTGTGTCTaGAGAAAATATGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDVWCV*RKYVLA
Trigger: GGCAAGTACATATTTTCTCCAGACACACCATACATC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGAGTGGGAGATGTATaGTGTGTCTGGAGAAAATAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGVGDV*CVWRKY
Trigger: ATATTTTCTCCAGACACACCATACATCTCCCACTCC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGAGTGGGAGATGTATaGTGTGTCTGGAGAAAATAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGVGDV*CVWRKY
Trigger: ATATTTTCTCCAGACACACCATACATCTCCCACTCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGAGTGGGAGATGTATaGTGTGTCTGGAGAAAATAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGVGDV*CVWRKY
Trigger: ATATTTTCTCCAGACACACCATACATCTCCCACTCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTAGCCATAGGCCTTaGTGCCCTCCCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICSHRP*CPPRLP
Trigger: AGGGAGCCTGGGAGGGCACCAAGGCCTATGGCTACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTAGCCATAGGCCTTaGTGCCCTCCCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACSHRP*CPPRLP
Trigger: AGGGAGCCTGGGAGGGCACCAAGGCCTATGGCTACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGATATGAACAGCATCTaGCTTGATGGTGCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDMNSI*LDGAVR
Trigger: TCTAACTGCACCATCAAGCCAGATGCTGTTCATATC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATATGAACAGCATCTaGCTTGATGGTGCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDMNSI*LDGAVR
Trigger: TCTAACTGCACCATCAAGCCAGATGCTGTTCATATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGATGACTTGGCCGCCTaGATGAAGTCTGGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIDDLAA*MKSGRS
Trigger: CGACCGCCCAGACTTCATCCAGGCGGCCAAGTCATC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGATGACTTGGCCGCCTaGATGAAGTCTGGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADDLAA*MKSGRS
Trigger: CGACCGCCCAGACTTCATCCAGGCGGCCAAGTCATC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGGTGCTTCTTGACATaGTCCTTGTACTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRCFLT*SLYLFS
Trigger: TGAGAACAAGTACAAGGACCATGTCAAGAAGCACCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCCTCACTGGCCTGTTTaGCTGCCTGGGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIPHWPV*LPGWPS
Trigger: AGAAGGCCACCCAGGCAGCCAAACAGGCCAGTGAGG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCTCACTGGCCTGTTTaGCTGCCTGGGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPHWPV*LPGWPS
Trigger: AGAAGGCCACCCAGGCAGCCAAACAGGCCAGTGAGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAACACGCAGTATTTCTaGCGTGTCTTGAACAACTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGNTQYF*RVLNNC
Trigger: ACAGTTGTTCAAGACACGCCAGAAATACTGCGTGTT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAACACGCAGTATTTCTaGCGTGTCTTGAACAACTGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVNTQYF*RVLNNC
Trigger: ACAGTTGTTCAAGACACGCCAGAAATACTGCGTGTT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAACACGCAGTATTTCTaGCGTGTCTTGAACAACTGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRNTQYF*RVLNNC
Trigger: ACAGTTGTTCAAGACACGCCAGAAATACTGCGTGTT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTAACCTCACTGAGTTaGTCCTGGACTTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLTSLS*SWTFLI
Trigger: AATCAAGAAAGTCCAGGATCAACTCAGTGAGGTTAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTAACCTCACTGAGTTaGTCCTGGACTTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLTSLS*SWTFLI
Trigger: AATCAAGAAAGTCCAGGATCAACTCAGTGAGGTTAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTTTTTCATCCACATaGCAGATAGTTTTAGCAACA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAFSST*QIVLAT
Trigger: TGTTGCTAAAACTATCTGTCATGTGGATGAAAAAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTGTAGATCGTTTTTaGCTTTTCATAGTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCVDRF*LFIVLP
Trigger: CGGAAGGACTATGAAAAGTCAAAAACGATCTACACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTGTAGATCGTTTTTaGCTTTTCATAGTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCVDRF*LFIVLP
Trigger: CGGAAGGACTATGAAAAGTCAAAAACGATCTACACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGGCCAGGTCCACATTaGTGCTGTCAGGAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAWPGPH*CCQEGS
Trigger: GCTACCCTCCTGACAGCATCAATGTGGACCTGGCCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACGTCCTGGAGGCTTCTaGAGCCAACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQARPGGF*SQRAFP
Trigger: AGGGAAAGCACGTTGGCTTCAGAAGCCTCCAGGACG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCATTAACTTTGGCTTaGATGAACTGTGGTAATTCA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYALTLA*MNCGNS
Trigger: TGAATTACCACAGTTCATTCAAGCCAAAGTTAATGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTTTATCACTCATTGTaGTCTGGTTTACTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVYHSL*SGLLWR
Trigger: TCTCCAGAGTAAACCAGATCACAATGAGTGATAAAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTTTATCACTCATTGTaGTCTGGTTTACTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVYHSL*SGLLWR
Trigger: TCTCCAGAGTAAACCAGATCACAATGAGTGATAAAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACTTGCAATATCTCTTaGTGCTTTGGCAGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTCNIS*CFGSFD
Trigger: ATCAAAGCTGCCAAAGCATCAAGAGATATTGCAAGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACTTGCAATATCTCTTaGTGCTTTGGCAGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTCNIS*CFGSFD
Trigger: ATCAAAGCTGCCAAAGCATCAAGAGATATTGCAAGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTATCCGGCATCACATaGATCTTGGTTTTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVSGIT*ILVLSL
Trigger: TAAAGACAAAACCAAGATTCATGTGATGCCGGATAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTAAGGGTATACTTTaGCTTGATGGCATTCCAATC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCKGIL*LDGIPI
Trigger: GATTGGAATGCCATCAAGTCAAAGTATACCCTTACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTAAGGGTATACTTTaGCTTGATGGCATTCCAATC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCKGIL*LDGIPI
Trigger: GATTGGAATGCCATCAAGTCAAAGTATACCCTTACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATTGATTTTGGCCTTTaGCTTATGGTAGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIDFGL*LMVALL
Trigger: AAGGAGAGCTACCATAAGTCAAAGGCCAAAATCAAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATTGATTTTGGCCTTTaGCTTATGGTAGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRIDFGL*LMVALL
Trigger: AAGGAGAGCTACCATAAGTCAAAGGCCAAAATCAAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATTGATTTTGGCCTTTaGCTTATGGTAGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIDFGL*LMVALL
Trigger: AAGGAGAGCTACCATAAGTCAAAGGCCAAAATCAAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTCAGCAGGGATATTaGTTTTGGCCTTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCQQGY*FWPLTY
Trigger: ATAAGTCAAAGGCCAAAATCAATATCCCTGCTGACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTCAGCAGGGATATTaGTTTTGGCCTTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCQQGY*FWPLTY
Trigger: ATAAGTCAAAGGCCAAAATCAATATCCCTGCTGACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTTGTCTTCTGCACGTaGGCTTTATACTTGATATCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLVFCT*ALYLIS
Trigger: TGATATCAAGTATAAAGCTCACGTGCAGAAGACAAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTTGTCTTCTGCACGTaGGCTTTATACTTGATATCA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLVFCT*ALYLIS
Trigger: TGATATCAAGTATAAAGCTCACGTGCAGAAGACAAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTGAATTTGTCCTTTaGCTTCTCATACTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGEFVL*LLILFP
Trigger: AGGAAAAAGTATGAGAAGTCAAAGGACAAATTCACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTATATTTCAGATCGCTaGCTTCATCCTTCACTTTGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYISDR*LHPSLC
Trigger: GCAAAGTGAAGGATGAAGTCAGCGATCTGAAATATA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATTTCTGGCGTGTCTTaGACAACTGTAATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVISGVS*TTVIFP
Trigger: AGGGAAAATTACAGTTGTTCAAGACACGCCAGAAAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTTCTGGGTCTCCTTaGCGCGTTTCACTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAASGSP*RVSLRA
Trigger: TGCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTCGACGATGCTGGTaGATTTGTAGGCCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICRRCW*ICRPRA
Trigger: GGCCCGAGGCCTACAAATTCACCAGCATCGTCGACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTATGGCTGTCCCTTTaGTTTCTCATAGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVWLSL*FLIVLF
Trigger: AAAGAGAACTATGAGAAAGCAAAGGGACAGCCATAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTATGGCTGTCCCTTTaGTTTCTCATAGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVWLSL*FLIVLF
Trigger: AAAGAGAACTATGAGAAAGCAAAGGGACAGCCATAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTATGGCTGTCCCTTTaGTTTCTCATAGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVWLSL*FLIVLF
Trigger: AAAGAGAACTATGAGAAAGCAAAGGGACAGCCATAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATTCATTCTGGCTGTTaGAATTTCAAAGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIHSGC*NFKAWC
Trigger: ACACCATGCTTTGAAATTGCAACAGCCAGAATGAAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTCCAGTTTCTTGATTaGTTCATATTCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVQFLD*FIFLGN
Trigger: ATTACCCAGGAATATGAAGCAATCAAGAAACTGGAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGTTGAGCTGGGCTTaGAACAGCACGGGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVLSWA*NSTGVS
Trigger: CGACACTCCCGTGCTGTTGCAAGCCCAGCTCAACAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTGTTGAGCTGGGCTTaGAACAGCACGGGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVLSWA*NSTGVS
Trigger: CGACACTCCCGTGCTGTTGCAAGCCCAGCTCAACAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGTTAATTTTAGACTaGACTGTAATGGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWLILD*TVMGAS
Trigger: AGATGCTCCCATTACAGTGCAGTCTAAAATTAACCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTATCGCTCTGTATGTaGATCATGTTCTTGGATAGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLSLCM*IMFLDS
Trigger: GCTATCCAAGAACATGATGCACATACAGAGCGATAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTATGTTGTAAGCATTaGACTTGGCCTGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLCCKH*TWPGET
Trigger: AGTTTCTCCAGGCCAAGTGCAATGCTTACAACATAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCCTGAGATTTCTTTaGAGCAGTCACACTGAACAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFLRFL*SSHTEH
Trigger: ATGTTCAGTGTGACTGCTGCAAAGAAATCTCAGGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCCTGAGATTTCTTTaGAGCAGTCACACTGAACAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFLRFL*SSHTEH
Trigger: ATGTTCAGTGTGACTGCTGCAAAGAAATCTCAGGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTCGTCTTCCAGGCTaGGGAAGCCAATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGRLPG*GSQCAS
Trigger: GGAAGCACATTGGCTTCCGCAGCCTGGAAGACGACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCCACCTGCATGAAGTaGACCAGCTTGGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIATCMK*TSLGSS
Trigger: AGACGACCCCAAGCTGGTGCACTTCATGCAGGTGGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCCACCTGCATGAAGTaGACCAGCTTGGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAATCMK*TSLGSS
Trigger: AGACGACCCCAAGCTGGTGCACTTCATGCAGGTGGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTGTCAGCCTCCCATaGTTGTTTATAGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLVSLP*LFIEIF
Trigger: AAAAATCTCTATAAACAAGCATGGGAGGCTGACAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCATGTTGATTGCATTTaGTTTGGCCAAAACGATCTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHVDCI*FGQNDL
Trigger: GAGATCGTTTTGGCCAAAGCAAATGCAATCAACATG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATCGCTCATGTTGATTaGATTTGCTTTGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIAHVD*ICFGQN
Trigger: GTTTTGGCCAAAGCAAATGCAATCAACATGAGCGAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGCTTTGATAGGAATTaGATCCGTTCTGAGGTCATA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSFDRN*IRSEVI
Trigger: TATGACCTCAGAACGGATGCAATTCCTATCAAAGCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGCTTTGATAGGAATTaGATCCGTTCTGAGGTCATA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSFDRN*IRSEVI
Trigger: TATGACCTCAGAACGGATGCAATTCCTATCAAAGCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGCATCTTAGCCACTTaGATGGAATGGACTAATTTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCILAT*MEWTNL
Trigger: CAAATTAGTCCATTCCATGCAAGTGGCTAAGATGCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTTGTTCATGGTGATTaGATTATTCTTTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLVHGD*IILCQH
Trigger: GTGCTGGCAAAGAATAATGCAATCACCATGAACAAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCTTCTGTATACAAATaGTTGCTCATAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGASVYK*LLIVMA
Trigger: TGCCATCACTATGAGCAAGCATTTGTATACAGAAGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCGTAGGCCTTCTTTaGTTGAATAATGTCGTTCTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFVGLL*LNNVVL
Trigger: CAGAACGACATTATTCAAGCAAAGAAGGCCTACGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGTTTATTGCTAATCTaGAAGGCATTGATTTGGGCC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSLLLI*KALIWA
Trigger: GGCCCAAATCAATGCCTTGCAGATTAGCAATAAACT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACACATTAAGAGCGTTTaGTCGAGCGAGATTAATTTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHIKSV*SSEINF
Trigger: GAAATTAATCTCGCTCGAGCAAACGCTCTTAATGTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCACATTAAGAGCGTTTaGTCGAGCGAGATTAATTTC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHIKSV*SSEINF
Trigger: GAAATTAATCTCGCTCGAGCAAACGCTCTTAATGTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCACTGAAGATATCTaGAGCATGTTTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLTEDI*SMFGMI
Trigger: AATCATGCCAAACATGCTGCAGATATCTTCAGTGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTCACTGAAGATATCTaGAGCATGTTTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLTEDI*SMFGMI
Trigger: AATCATGCCAAACATGCTGCAGATATCTTCAGTGAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGTCATTGGGAATATaGACATTTGCTTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMSLGI*TFALVS
Trigger: AGACACCAAAGCAAATGTGCATATTCCCAATGACAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTGATCTGGTCGCCTaGGGTCTTAGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAADLVA*GLSQQM
Trigger: CATCTGCTGGCTAAGACCGCAGGCGACCAGATCAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTGTGGTGCGCAGGTaGTCTGGGGTGTCCACAACC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFVVRR*SGVSTT
Trigger: GGTTGTGGACACCCCAGAGCACCTGCGCACCACAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTTGTGGTGCGCAGGTaGTCTGGGGTGTCCACAACC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFVVRR*SGVSTT
Trigger: GGTTGTGGACACCCCAGAGCACCTGCGCACCACAAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCCACTTCCATGGCGTaGTTCACCTCTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAATSMA*FTSGGS
Trigger: AGAGCCTCCAGAGGTGAAGCACGCCATGGAAGTGGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCCACTTCCATGGCGTaGTTCACCTCTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIATSMA*FTSGGS
Trigger: AGAGCCTCCAGAGGTGAAGCACGCCATGGAAGTGGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTGGGCGGCCAAGCATaGTTAACCCATGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALGGQA*LTHGCL
Trigger: AAGGCAGCCATGGGTTAAGCATGCTTGGCCGCCCAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATACTCTTTCTCGCTTaGTATTTTGGTTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYILFLA*YFGCMS
Trigger: AGACATGCAACCAAAATAGCAAGCGAGAAAGAGTAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGCCTTTTCCATTTCTaGCGATTGCTTGTACTTAAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGLFHF*RLLVLN
Trigger: ATTAAGTACAAGCAATCGGCAGAAATGGAAAAGGCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGTTCCTTGTCCGATTaGTTCTTTATACTTGACCGA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSSLSD*FFILDR
Trigger: TCGGTCAAGTATAAAGAAGCAATCGGACAAGGAACT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGTTCCTTGTCCGATTaGTTCTTTATACTTGACCGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSSLSD*FFILDR
Trigger: TCGGTCAAGTATAAAGAAGCAATCGGACAAGGAACT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTGAATGTTGTCTTCTaGCGGATCATAGTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLNVVF*RIIVKN
Trigger: GTTTTTGACTATGATCCGGCAGAAGACAACATTCAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATAGTCCACGTTGCTTaGCAGCGCCTGGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIVHVA*QRLALL
Trigger: AAGGAGGGCCAGGCGCTGGCAAGCAACGTGGACTAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGCAATTTCAAAGCATaGTGTCTCACTCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCNFKA*CLTPFS
Trigger: GGAAAATGGAGTGAGACACCATGCTTTGAAATTGCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTCAAGTTGATACTTaGGGGTCTCACAGTAATTCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCQVDT*GSHSNS
Trigger: TGAATTACTGTGAGACCCCCAAGTATCAACTTGACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTCAAGTTGATACTTaGGGGTCTCACAGTAATTCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCQVDT*GSHSNS
Trigger: TGAATTACTGTGAGACCCCCAAGTATCAACTTGACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTCTGACTGTATCTTaGCCACATTCATGTAATGAA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCLTVS*PHSCNE
Trigger: TTCATTACATGAATGTGGCCAAGATACAGTCAGACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAGGTGTATTGTATTTaGTCTTCGTCTTTTCGTAGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYEVYCI*SSSFRS
Trigger: ACTACGAAAAGACGAAGACCAAATACAATACACCTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTTTTAACTTTCTCTTaGTCAAGGCTACCAATCGGA +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFLTFS*SRLPIG
Trigger: TCCGATTGGTAGCCTTGACCAAGAGAAAGTTAAAAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATATCCAGGGGTGTGTaGTACCGGGTCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISRGV*YRVLLA
Trigger: GGCCAGCAAGACCCGGTACCACACACCCCTGGATAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTATAGATTATCACTCTaGATTTGCATGGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYRLSL*ICMAFL
Trigger: CAGGAATGCCATGCAAATCCAGAGTGATAATCTATA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATACCTTTCATCCAGTaGGTGAAGTCGGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRIPFIQ*VKSDLY
Trigger: ATACAAATCCGACTTCACCCACTGGATGAAAGGTAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATACCTTTCATCCAGTaGGTGAAGTCGGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIPFIQ*VKSDLY
Trigger: ATACAAATCCGACTTCACCCACTGGATGAAAGGTAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATACCTTTCATCCAGTaGGTGAAGTCGGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIPFIQ*VKSDLY
Trigger: ATACAAATCCGACTTCACCCACTGGATGAAAGGTAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTGGAAAGATGTCTTaGATTTCTCATAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCGKMS*ISHSPS
Trigger: AGAAGGGCTATGAGAAATCCAAGACATCTTTCCACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTGGTGGCCACTTCCTaGGACTTCTTGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALVATS*DFLAAT
Trigger: GGTGGCAGCCAAGAAGTCCCAGGAAGTGGCCACCAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTGTTTGATTCTGCTTaGCTTGCAAAATATCTGGTG +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVFDSA*LAKYLV
Trigger: CACCAGATATTTTGCAAGCCAAGCAGAATCAAACAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTGTTTGATTCTGCTTaGCTTGCAAAATATCTGGTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVFDSA*LAKYLV
Trigger: CACCAGATATTTTGCAAGCCAAGCAGAATCAAACAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAACTTATTTCTGTCTaGAGGTTGGCGGTATTTCTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVELISV*RLAVFL
Trigger: AAGAAATACCGCCAACCTCCAGACAGAAATAAGTTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGAACTTATTTCTGTCTaGAGGTTGGCGGTATTTCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRELISV*RLAVFL
Trigger: AAGAAATACCGCCAACCTCCAGACAGAAATAAGTTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATCCAAAGAGCCAATaGGCACCCAGCCGATGCCTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHPKSQ*APSRCL
Trigger: GAGGCATCGGCTGGGTGCCCATTGGCTCTTTGGATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTTCTTCCATGGCCTaGCGGTACAGGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAASSMA*RYRLSL
Trigger: CAGTGAGAGCCTGTACCGCCAGGCCATGGAAGAAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCCGAGCACCAATGTaGTGGCCCAGCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFRAPM*WPSCLR
Trigger: CCGCAAACAGCTGGGCCACCACATTGGTGCTCGGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGGCACAGCATCGGGTaGCAGAATGTAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAWHSIG*QNVACG
Trigger: GCCACAGGCTACATTCTGCCACCCGATGCTGTGCCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGATGTATGGTGTGTCTaGAGAAAATATGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRDVWCV*RKYVLA
Trigger: GGCAAGTACATATTTTCTCCAGACACACCATACATC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATGTATGGTGTGTCTaGAGAAAATATGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDVWCV*RKYVLA
Trigger: GGCAAGTACATATTTTCTCCAGACACACCATACATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAAATGCCTGTTAATTaGACAGTCAGCAACATACTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYEMPVN*TVSNIL
Trigger: AAGTATGTTGCTGACTGTCCAATTAACAGGCATTTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGCCTTCTTGATGTCTaGCCGGTCAGCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGLLDV*PVSHCG
Trigger: ACCACAGTGGCTGACCGGCCAGACATCAAGAAGGCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGCATGGATAATTTCTaGGGTATCAACAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSMDNF*GINNRS
Trigger: ACTTCTGTTGTTGATACCCCAGAAATTATCCATGCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTACTTTTTCTGGCTaGAAAGGTTCTTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCTFSG*KGSSLA
Trigger: AGCAAGTGAAGAACCTTTCCAGCCAGAAAAAGTACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTACTTTTTCTGGCTaGAAAGGTTCTTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCTFSG*KGSSLA
Trigger: AGCAAGTGAAGAACCTTTCCAGCCAGAAAAAGTACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCTTTTTCATCCACATaGCAGATAGTTTTAGCAACA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRAFSST*QIVLAT
Trigger: TGTTGCTAAAACTATCTGTCATGTGGATGAAAAAGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCATTAACTTTGGCTTaGATGAACTGTGGTAATTCA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRALTLA*MNCGNS
Trigger: TGAATTACCACAGTTCATTCAAGCCAAAGTTAATGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCATTAACTTTGGCTTaGATGAACTGTGGTAATTCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGALTLA*MNCGNS
Trigger: TGAATTACCACAGTTCATTCAAGCCAAAGTTAATGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCTGCCGAGCGTGGATaGCATCATTCTGGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPAERG*HHSGQV
Trigger: TACCTGACCAGAATGATGTCATCCACGCTCGGCAGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAGGGGTGTCTGGCATaGCATGGATGGAGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQGCLA*HGWRLC
Trigger: ACAAAGCCTCCATCCATGTCATGCCAGACACCCCTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCTGCTTCCCACTCTTaGCTGCCTGAACGTAAACCG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAASHS*LPERKP
Trigger: CGGTTTACGTTCAGGCAGTCAAGAGTGGGAAGCAGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGGCCACTTTGCCTCTaGCACTGTGCACGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGPLCL*HCARSH
Trigger: ATGACTACGTGCACAGTGTCAGAGGCAAAGTGGCCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATCTTGAAGAAGTCTaGTTTGTAGATCAACTCACT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHLEEV*FVDQLT
Trigger: AGTGAGTTGATCTACAAATCAGACTTCTTCAAGATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACATCTTGAAGAAGTCTaGTTTGTAGATCAACTCACT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGHLEEV*FVDQLT
Trigger: AGTGAGTTGATCTACAAATCAGACTTCTTCAAGATG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTTCTGCTTCTTGCCTaGGGCTCTGTACACCAGCTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILLLLA*GSVHQL
Trigger: GAGCTGGTGTACAGAGCCTCAGGCAAGAAGCAGAAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTTCTGCTTCTTGCCTaGGGCTCTGTACACCAGCTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALLLLA*GSVHQL
Trigger: GAGCTGGTGTACAGAGCCTCAGGCAAGAAGCAGAAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCTCATTCATCAACTaGGTTGCATACTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFSFIN*VAYLKC
Trigger: GCATTTCAAGTATGCAACTCAGTTGATGAATGAGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCTCATTCATCAACTaGGTTGCATACTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFSFIN*VAYLKC
Trigger: GCATTTCAAGTATGCAACTCAGTTGATGAATGAGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCTCATTCATCAACTaGGTTGCATACTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFSFIN*VAYLKC
Trigger: GCATTTCAAGTATGCAACTCAGTTGATGAATGAGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTGAATTTGTCCTTTaGCTTCTCATACTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGEFVL*LLILFP
Trigger: AGGAAAAAGTATGAGAAGTCAAAGGACAAATTCACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTGAATTTGTCCTTTaGCTTCTCATACTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGEFVL*LLILFP
Trigger: AGGAAAAAGTATGAGAAGTCAAAGGACAAATTCACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGTGAATTTGTCCTTTaGCTTCTCATACTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGEFVL*LLILFP
Trigger: AGGAAAAAGTATGAGAAGTCAAAGGACAAATTCACC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCTTGGTCACTGCCTTaGCGTGAACTGTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAWSLP*RELYPW
Trigger: CCAGGGATACAGTTCACGTCAAGGCAGTGACCAAGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATATATTCTTTCTCATTaGGGATCTGAGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYILSH*GSEWHS
Trigger: AGAATGCCACTCAGATCCTCAATGAGAAAGAATATA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCTCAATCTCTGGAGTaGCAGTGGTCGGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISQSLE*QWSGCL
Trigger: CAGGCATCCCGACCACTGTCACTCCAGAGATTGAGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTCAATCTCTGGAGTaGCAGTGGTCGGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASQSLE*QWSGCL
Trigger: CAGGCATCCCGACCACTGTCACTCCAGAGATTGAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCAGTAGACGGGTGTaGTGGGATAGAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGSRRV*WDRGQC
Trigger: ACACTGTCCTCTATCCCATCACACCCGTCTACTGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATTCATTCTGGCTGTTaGAATTTCAAAGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRIHSGC*NFKAWC
Trigger: ACACCATGCTTTGAAATTGCAACAGCCAGAATGAAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTAATTGATGCTCCTTaGTTTGGTCTTTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVIDAP*FGLFIV
Trigger: AACTATGAAAAGACCAAAGCAAGGAGCATCAATTAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTCCAGTTTCTTGATTaGTTCATATTCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVQFLD*FIFLGN
Trigger: ATTACCCAGGAATATGAAGCAATCAAGAAACTGGAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTCCAGTTTCTTGATTaGTTCATATTCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVQFLD*FIFLGN
Trigger: ATTACCCAGGAATATGAAGCAATCAAGAAACTGGAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTCCAGTTTCTTGATTaGTTCATATTCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVQFLD*FIFLGN
Trigger: ATTACCCAGGAATATGAAGCAATCAAGAAACTGGAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCGGTCTTCAGGGAGTaGAGCATCTTGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAVFRE*SILGSS
Trigger: TGATGACCCCAAGATGCTGCACTCCCTGAAGACCGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCCGAGGCGCGCTTTaGCTTTTCCATCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFRGAL*LFHLQG
Trigger: TCCCTGGAGATGGAAAAGGCAAAGCGCGCCTCGGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCCGAGGCGCGCTTTaGCTTTTCCATCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFRGAL*LFHLQG
Trigger: TCCCTGGAGATGGAAAAGGCAAAGCGCGCCTCGGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGTTAATTTTAGACTaGACTGTAATGGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWLILD*TVMGAS
Trigger: AGATGCTCCCATTACAGTGCAGTCTAAAATTAACCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGTTAATTTTAGACTaGACTGTAATGGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWLILD*TVMGAS
Trigger: AGATGCTCCCATTACAGTGCAGTCTAAAATTAACCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCTGAGCCAAAACCATaGCCATGGAGTCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAEPKP*PWSLAH
Trigger: GTGTGCCAGACTCCATGGGCATGGTTTTGGCTCAGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTGAGCCAAAACCATaGCCATGGAGTCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAEPKP*PWSLAH
Trigger: GTGTGCCAGACTCCATGGGCATGGTTTTGGCTCAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCACTGACAAGGTTCTaGCCTTCCTTGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASLTRF*PSLAAT
Trigger: TGTGGCCGCCAAGGAAGGGCAGAACCTTGTCAGTGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAACGCACTCCGCATCTaGTGGAAATCCAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQANALRI*WKSRQW
Trigger: CCACTGCCTGGATTTCCAGCAGATGCGGAGTGCGTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAACGCACTCCGCATCTaGTGGAAATCCAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSINALRI*WKSRQW
Trigger: CCACTGCCTGGATTTCCAGCAGATGCGGAGTGCGTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGTCATTGGGAATATaGACATTTGCTTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMSLGI*TFALVS
Trigger: AGACACCAAAGCAAATGTGCATATTCCCAATGACAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGTCATTGGGAATATaGACATTTGCTTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMSLGI*TFALVS
Trigger: AGACACCAAAGCAAATGTGCATATTCCCAATGACAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTCTGAAGCTTGTATaGATGGAGGGCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITLKLV*MEGPVQ
Trigger: CTGGACCGGGCCCTCCATGCATACAAGCTTCAGAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGAGTTTCCTTAGGTaGCGGGAGCGGACCATGTCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQSFLR*RERTMS
Trigger: TGACATGGTCCGCTCCCGGCACCTAAGGAAACTCTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTTGCATACTTGAAATaGCTGTTAATTGGACAGTCA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVAYLK*LLIGQS
Trigger: TGACTGTCCAATTAACAGGCATTTCAAGTATGCAAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATTCATCAACTGAGTTaGATACTTGAAATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIHQLS*ILEMPV
Trigger: AACAGGCATTTCAAGTATGCAACTCAGTTGATGAAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGTATATCACTGATTTaGTTGTTGACTTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSISLI*LLTFVV
Trigger: CACCACAAAAGTCAACAAGCAAATCAGTGATATACT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAGCCTTGGGCCAGGTaGTTCTTGACATGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAEPWAR*FLTWSL
Trigger: CAAGGACCATGTCAAGAAGCACCTGGCCCAAGGCTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTGGCCTGTTTGGCTaGCTGGGTGGCCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITGLFG*LGGLLD
Trigger: ATCAAGAAGGCCACCCAGGCAGCCAAACAGGCCAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACTGGCCTGTTTGGCTaGCTGGGTGGCCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQATGLFG*LGGLLD
Trigger: ATCAAGAAGGCCACCCAGGCAGCCAAACAGGCCAGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTGCCTTCCTTGCGATaGTTGGCTCTGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILPSLR*LALYST
Trigger: GGTGGAGTACAGAGCCAAGCATCGCAAGGAAGGCAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTATTTGGGTGTTTTaGCCTTCTCCTTGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCIWVF*PSPCQN
Trigger: ATTTTGACAAGGAGAAGGGCAAAACACCCAAATACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTATTTGGGTGTTTTaGCCTTCTCCTTGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCIWVF*PSPCQN
Trigger: ATTTTGACAAGGAGAAGGGCAAAACACCCAAATACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTATTTGGGTGTTTTaGCCTTCTCCTTGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCIWVF*PSPCQN
Trigger: ATTTTGACAAGGAGAAGGGCAAAACACCCAAATACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATACTCTTTCTCGCTTaGTATTTTGGTTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVILFLA*YFGCMS
Trigger: AGACATGCAACCAAAATAGCAAGCGAGAAAGAGTAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTGAATGTTGTCTTCTaGCGGATCATAGTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLNVVF*RIIVKN
Trigger: GTTTTTGACTATGATCCGGCAGAAGACAACATTCAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTGAATGTTGTCTTCTaGCGGATCATAGTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLNVVF*RIIVKN
Trigger: GTTTTTGACTATGATCCGGCAGAAGACAACATTCAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGCCAGCGCTGGTGTaGCAGTTTCTGATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVPALV*QFLIGH
Trigger: ATGGCCAATCAGAAACTGCCACACCAGCGCTGGCAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGTAATTCATACTCTTaGCCTTTGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSNSYS*PLSSHS
Trigger: ACTATGAGAAGACAAAGGCCAAGAGTATGAATTACT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTGCGGCAGGTCTGCTaGCAGGTTGTACTTATGCAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALRQVC*QVVLMQ
Trigger: CTGCATAAGTACAACCTGCCAGCAGACCTGCCGCAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTCTGACTGTATCTTaGCCACATTCATGTAATGAA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCLTVS*PHSCNE
Trigger: TTCATTACATGAATGTGGCCAAGATACAGTCAGACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTCTGACTGTATCTTaGCCACATTCATGTAATGAA +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCLTVS*PHSCNE
Trigger: TTCATTACATGAATGTGGCCAAGATACAGTCAGACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAGGTGTATTGTATTTaGTCTTCGTCTTTTCGTAGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGEVYCI*SSSFRS
Trigger: ACTACGAAAAGACGAAGACCAAATACAATACACCTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAGGTGTATTGTATTTaGTCTTCGTCTTTTCGTAGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVEVYCI*SSSFRS
Trigger: ACTACGAAAAGACGAAGACCAAATACAATACACCTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTTTAACTTTCTCTTaGTCAAGGCTACCAATCGGA +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFLTFS*SRLPIG
Trigger: TCCGATTGGTAGCCTTGACCAAGAGAAAGTTAAAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATATAGATTATCACTCTaGATTTGCATGGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYRLSL*ICMAFL
Trigger: CAGGAATGCCATGCAAATCCAGAGTGATAATCTATA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCTCCAAGGAGTCTATaGGGACCCAGCCGATACCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPPRSL*GPSRYL
Trigger: AAGGTATCGGCTGGGTCCCCATAGACTCCTTGGAGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATAAATGCTTATTCATaGTGTGAGCATTCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGINAYS*CEHSAS
Trigger: CGAAGCAGAATGCTCACACCATGAATAAGCATTTAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATAAATGCTTATTCATaGTGTGAGCATTCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRINAYS*CEHSAS
Trigger: CGAAGCAGAATGCTCACACCATGAATAAGCATTTAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAAACTTGAATTTATTTaGGTGCTGACGGTAAACATG +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYKLEFI*VLTVNM
Trigger: CATGTTTACCGTCAGCACCCAAATAAATTCAAGTTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTATCTGGCATAATGTaGACAGTGGTTTTATCCTTA +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVSGIM*TVVLSL
Trigger: TAAGGATAAAACCACTGTCCACATTATGCCAGATAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATAGCCTTGCCTCCTaGCCTCCTCCAGAGACACTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHSLAS*PPPETL
Trigger: AAGTGTCTCTGGAGGAGGCCAGGAGGCAAGGCTATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCATCTTCCACACTCTaGGCTCCGATGTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASSSTL*APMWWP
Trigger: AGGCCACCACATCGGAGCCCAGAGTGTGGAAGATGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCATCTTCCACACTCTaGGCTCCGATGTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISSSTL*APMWWP
Trigger: AGGCCACCACATCGGAGCCCAGAGTGTGGAAGATGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTCAGCCTTGTAGATaGCATCGCTCTGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGQPCR*HRSAAR
Trigger: ACGAGCTGCAGAGCGATGCCATCTACAAGGCTGACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036934.12
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGGGGCTCTGGAACTTaGTCTTCCATTTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRGSGT*SSIWPT
Trigger: AGTGGGCCAAATGGAAGACCAAGTTCCAGAGCCCCG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACGGGGCTCTGGAACTTaGTCTTCCATTTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQARGSGT*SSIWPT
Trigger: AGTGGGCCAAATGGAAGACCAAGTTCCAGAGCCCCG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGGGCATGAACGAATaGCACAGCATCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMGMNE*HSIGWQ
Trigger: CTGCCACCCGATGCTGTGCCATTCGTTCATGCCCAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGGGCATGAACGAATaGCACAGCATCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMGMNE*HSIGWQ
Trigger: CTGCCACCCGATGCTGTGCCATTCGTTCATGCCCAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTATGCACATTTGCTTTaGTGTCTTCATAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYAHLL*CLHNLF
Trigger: GAAGAGATTATGAAGACACCAAAGCAAATGTGCATA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTTCATCATGTCATTaGGAATATGCACATTTGCTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGSSCH*EYAHLL
Trigger: AAGCAAATGTGCATATTCCCAATGACATGATGAACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTTCATCATGTCATTaGGAATATGCACATTTGCTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGSSCH*EYAHLL
Trigger: AAGCAAATGTGCATATTCCCAATGACATGATGAACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAAATGCCTGTTAATTaGACAGTCAGCAACATACTT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVEMPVN*TVSNIL
Trigger: AAGTATGTTGCTGACTGTCCAATTAACAGGCATTTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGAAATGCCTGTTAATTaGACAGTCAGCAACATACTT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCREMPVN*TVSNIL
Trigger: AAGTATGTTGCTGACTGTCCAATTAACAGGCATTTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTGATCTGGCTGATCTaGTCGCCTGCGGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILIWLI*SPAVLA
Trigger: GGCTAAGACCGCAGGCGACCAGATCAGCCAGATCAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGACATGCAGCAGCATaGGTGTGTCATGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGHAAA*VCHGWW
Trigger: CCACCATCCATGACACACCCATGCTGCTGCATGTCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGACATGCAGCAGCATaGGTGTGTCATGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGHAAA*VCHGWW
Trigger: CCACCATCCATGACACACCCATGCTGCTGCATGTCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCCAGTATGCTTTATTaGCTTCGTACTGTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSSMLY*LRTVSC
Trigger: ACAAGAAACAGTACGAAGCCAATAAAGCATACTGGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCCAGTATGCTTTATTaGCTTCGTACTGTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSSMLY*LRTVSC
Trigger: ACAAGAAACAGTACGAAGCCAATAAAGCATACTGGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCGTGCTTCACCTCTaGAGGCTCTTGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGVLHL*RLLHDG
Trigger: TCCATCATGCAAGAGCCTCCAGAGGTGAAGCACGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCCTGTTTGGCTGCCTaGGTGGCCTTCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAACLAA*VAFLMS
Trigger: AGACATCAAGAAGGCCACCCAGGCAGCCAAACAGGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCTGGCTGCTCAGCTTaGCTGCCTTCTTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPGCSA*LPSWPF
Trigger: AAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCGCGGTATTTAACCTaGCTGCTCAGCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASRYLT*LLSLAA
Trigger: GGCAGCCAAGCTGAGCAGCCAGGTTAAATACCGCGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCCCGCATAAAATCTaGAGTCTCGTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGPHKI*SLVGHG
Trigger: GCCATGGCCAACGAGACTCCAGATTTTATGCGGGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGCCCGCATAAAATCTaGAGTCTCGTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGPHKI*SLVGHG
Trigger: GCCATGGCCAACGAGACTCCAGATTTTATGCGGGCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGCATGGATAATTTCTaGGGTATCAACAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSMDNF*GINNRS
Trigger: ACTTCTGTTGTTGATACCCCAGAAATTATCCATGCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGCATGGATAATTTCTaGGGTATCAACAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSMDNF*GINNRS
Trigger: ACTTCTGTTGTTGATACCCCAGAAATTATCCATGCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGCATGGATAATTTCTaGGGTATCAACAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSMDNF*GINNRS
Trigger: ACTTCTGTTGTTGATACCCCAGAAATTATCCATGCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTCATAATATGACATaGACTTCTCTGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSHNMT*TSLHLP
Trigger: AGGAAGATGCAGAGAAGTCCATGTCATATTATGAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTCATAATATGACATaGACTTCTCTGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSHNMT*TSLHLP
Trigger: AGGAAGATGCAGAGAAGTCCATGTCATATTATGAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCTCATAATATGACATaGACTTCTCTGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSHNMT*TSLHLP
Trigger: AGGAAGATGCAGAGAAGTCCATGTCATATTATGAGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAGCTGAAATTCTTTTaGTTTTCTTTAACACGCAGT +
Preference number: 4 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYELKFF*FSLTRS
Trigger: ACTGCGTGTTAAAGAAAACCAAAAGAATTTCAGCTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCTCTCTCCATGTCTaGAGTGACAGGCGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGSLHV*SDRRWC
Trigger: ACACCAACGCCTGTCACTCCAGACATGGAGAGAGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTTGAGATGTGCCGTTaGGTTTCCCTAACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVEMCR*VSLTRL
Trigger: GAGGCGGGTTAGGGAAACCCAACGGCACATCTCAAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTGGAGTATCACTTGTaGTGGCGTATGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILEYHL*WRMAVP
Trigger: AGGGACAGCCATACGCCATCACAAGTGATACTCCAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCAGCTGTTTGGAATTaGCCTGGGCTTGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASAVWN*PGLAPG
Trigger: TCCTGGTGCAAGCCCAGGTCAATTCCAAACAGCTGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCAGCTGTTTGGAATTaGCCTGGGCTTGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISAVWN*PGLAPG
Trigger: TCCTGGTGCAAGCCCAGGTCAATTCCAAACAGCTGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATTCCCGGTCTGACTaGATCTTGGCCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYSRSD*ILATCM
Trigger: CATGCAGGTGGCCAAGATTCAGTCAGACCGGGAATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTATTCCCGGTCTGACTaGATCTTGGCCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYSRSD*ILATCM
Trigger: CATGCAGGTGGCCAAGATTCAGTCAGACCGGGAATA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTTGTATTCCCGGTCTaGCTGAATCTTGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALVFPV*LNLGHL
Trigger: CAGGTGGCCAAGATTCAGTCAGACCGGGAATACAAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGCTGCCGGTACTTCTaGTCGCTGGCATATTCCGTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACCRYF*SLAYSV
Trigger: AACGGAATATGCCAGCGATCAGAAGTACCGGCAGCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTAGCAATGTCCCTTaGTGTCTTGGCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITSNVP*CLGQLD
Trigger: GTCCAGCTGGCCAAGACATCAAGGGACATTGCTAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAGCTCTCTTACACTTaGCCACATCCAGAGACCCGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQLSYT*PHPETR
Trigger: TCGGGTCTCTGGATGTGGTCAAGTGTAAGAGAGCTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGCTCTCTTACACTTaGCCACATCCAGAGACCCGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQLSYT*PHPETR
Trigger: TCGGGTCTCTGGATGTGGTCAAGTGTAAGAGAGCTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAATACTTGTGTACTTaGGCTTCACCACGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQYLCT*ASPRGS
Trigger: GGACCCCCGTGGTGAAGCTCAAGTACACAAGTATTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATCACAGCTCATCTTaGCTTCATCCCACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHHSSS*LHPTPH
Trigger: GTGAGGGGTGGGATGAAGTCAAGATGAGCTGTGATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATCACAGCTCATCTTaGCTTCATCCCACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHHSSS*LHPTPH
Trigger: GTGAGGGGTGGGATGAAGTCAAGATGAGCTGTGATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTACTCCAGGTCACTaGGGATATACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGTPGH*GYTGTS
Trigger: AGAGGTGCCAGTATATCCTCAGTGACCTGGAGTACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTACTCCAGGTCACTaGGGATATACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGTPGH*GYTGTS
Trigger: AGAGGTGCCAGTATATCCTCAGTGACCTGGAGTACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCGCTGACTTTCTTCTaGGAGTCCTTGGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASLTFF*ESLAVT
Trigger: GGTGACTGCCAAGGACTCTCAGAAGAAAGTCAGCGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAGACACCAGATTGCTaGCAGTCTTCGCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQTPDC*QSSPRG
Trigger: TCCTCTTGGCGAAGACTGTCAGCAATCTGGTGTCTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGACACCAGATTGCTaGCAGTCTTCGCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQTPDC*QSSPRG
Trigger: TCCTCTTGGCGAAGACTGTCAGCAATCTGGTGTCTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTGGAGGCTCTTGCATaGTGGAGTAGTTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALEALA*WSSWTC
Trigger: GCAAGTCCAACTACTCCATCATGCAAGAGCCTCCAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCACTCTGCATCTGCTaGGACTCTTTGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPLCIC*DSLAVM
Trigger: CATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCCACTCTGCATCTGCTaGGACTCTTTGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIPLCIC*DSLAVM
Trigger: CATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCGTTTGCTTCACTCTaGGCATCTCAGGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAFASL*ASQASF
Trigger: GAAAGACGCCTGAGATGCTCAGAGTGAAGCAAACGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTTCCATCTCAGGAGTaGAGGGTGTGGGGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFPSQE*RVWGLL
Trigger: AAGCAACCCCCACACCCTTCACTCCTGAGATGGAAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTCCATCTCAGGAGTaGAGGGTGTGGGGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFPSQE*RVWGLL
Trigger: AAGCAACCCCCACACCCTTCACTCCTGAGATGGAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCTCCATGTCTGGAGTaGCAGGCGTTGGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISPCLE*QALVLL
Trigger: AAGCAACACCAACGCCTGTCACTCCAGACATGGAGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTCCATGTCTGGAGTaGCAGGCGTTGGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASPCLE*QALVLL
Trigger: AAGCAACACCAACGCCTGTCACTCCAGACATGGAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGCAATATCACTCAGTaGTTTCTGGGCCTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGNITQ*FLGLGY
Trigger: GTAGCCCAGGCCCAGAAAGCACTGAGTGATATTGCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTAATTGATGCTCCTTaGTTTGGTCTTTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVIDAP*FGLFIV
Trigger: AACTATGAAAAGACCAAAGCAAGGAGCATCAATTAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAATTGACCTGGGCTTaGACCAGGACAGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIELTWA*TRTGES
Trigger: AGACTCTCCTGTCCTGGTGCAAGCCCAGGTCAATTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAACTGCGGCAGGTCTaGTGGCAGGTTGTACTTATG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAELRQV*WQVVLM
Trigger: CATAAGTACAACCTGCCAGCAGACCTGCCGCAGTTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTGGTGATGTTGGCTTaGGCATCCTTGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILVMLA*ASLAAV
Trigger: CACAGCAGCCAAGGATGCGCAAGCCAACATCACCAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTGGCCCAGCTGCTTaGGGTAGCCATCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGGPAA*GSHLCI
Trigger: AATACAAAGATGGCTACCGCAAGCAGCTGGGCCACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGTTTTGGTCAGGCATaGACGTCCACTCGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRFGQA*TSTRVG
Trigger: ACCTACACGAGTGGACGTGCATGCCTGACCAAAACG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACAGCATCACTCAGCTaGTTCCCACTCTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITASLS*FPLLTA
Trigger: GGCAGTCAAGAGTGGGAAGCAGCTGAGTGATGCTGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACAGCATCACTCAGCTaGTTCCCACTCTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQATASLS*FPLLTA
Trigger: GGCAGTCAAGAGTGGGAAGCAGCTGAGTGATGCTGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATTCATCAACTGAGTTaGATACTTGAAATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIHQLS*ILEMPV
Trigger: AACAGGCATTTCAAGTATGCAACTCAGTTGATGAAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGTATATCACTGATTTaGTTGTTGACTTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSISLI*LLTFVV
Trigger: CACCACAAAAGTCAACAAGCAAATCAGTGATATACT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGACCTCTGCCTCGGATaGTTTCTTCCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADLCLG*FLPGLS
Trigger: GGAAAGACCTGGAAGAAAGCATCCGAGGCAGAGGTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGACCTCTGCCTCGGATaGTTTCTTCCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIDLCLG*FLPGLS
Trigger: GGAAAGACCTGGAAGAAAGCATCCGAGGCAGAGGTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTCCTGCCAGTTCTCTaGACAGTGCCATACATCCAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVLPVL*TVPYIQ
Trigger: CTGGATGTATGGCACTGTGCAGAGAACTGGCAGGAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCCTGGGTAATGGTCTaGGGGAAGAAGCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISWVMV*GKKPLP
Trigger: AGGCAAAGGCTTCTTCCCCCAGACCATTACCCAGGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCGTTCACTCTGTGCTaGATAAAGGCAGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAFTLC*IKAGAS
Trigger: GGATGCTCCTGCCTTTATCCAGCACAGAGTGAACGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCGTTCACTCTGTGCTaGATAAAGGCAGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAFTLC*IKAGAS
Trigger: GGATGCTCCTGCCTTTATCCAGCACAGAGTGAACGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTTGGCTGCCAGCAGTaGGATGGCATCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFGCQQ*DGIHLD
Trigger: ATCAAGGTGGATGCCATCCCACTGCTGGCAGCCAAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTGGCTGCCAGCAGTaGGATGGCATCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFGCQQ*DGIHLD
Trigger: ATCAAGGTGGATGCCATCCCACTGCTGGCAGCCAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGTAATTCATACTCTTaGCCTTTGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSNSYS*PLSSHS
Trigger: ACTATGAGAAGACAAAGGCCAAGAGTATGAATTACT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTTTGGTGTTGAGCTaGGCTTGCAACAGCACGGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACLVLS*ACNSTG
Trigger: TCCCGTGCTGTTGCAAGCCCAGCTCAACACCAAACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGCTTCTCGGGGTGCTaGCGATACTTTCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISFSGC*RYFLSL
Trigger: GAGTGAGAGAAAGTATCGCCAGCACCCCGAGAAGCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTCACTCTGCACTTTaGCAATGTGGAGGGACCACA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGHSAL*QCGGTT
Trigger: TGTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATGTGAACTTCAGCTaGTCTGCAGGCTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHVNFS*SAGWRY
Trigger: GTATCGCCAGCCTGCAGACCAGCTGAAGTTCACATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGGCAGAATTGCTCTTaGCCAGCAGGATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAWQNCS*PAGFQG
Trigger: CCCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTCTGGTCATTTCTATaGAGCCTTCCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILWSFL*SLPASS
Trigger: GCTGGATGCCGGAAGGCTCCATAGAAATGACCAGAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGGCGCCCTTCACTCTaGTCATTTCTATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGRPSL*SFLWSL
Trigger: AAGGCTCCATAGAAATGACCAGAGTGAAGGGCGCCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATATGCACATTTGCTTTaGTGTCTTCATAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYAHLL*CLHNLF
Trigger: GAAGAGATTATGAAGACACCAAAGCAAATGTGCATA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCACTGAGGATATACTaGCACCTCTTCGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASLRIY*HLFAST
Trigger: CGTGCTGGCGAAGAGGTGCCAGTATATCCTCAGTGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTGCTTCTGGTTCTTaGCATGTGTCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGASGS*HVSGTR
Trigger: CCTTGTCCCTGACACATGCCAAGAACCAGAAGCACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTGCTTCTGGTTCTTaGCATGTGTCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGASGS*HVSGTR
Trigger: CCTTGTCCCTGACACATGCCAAGAACCAGAAGCACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCAGGGAGATCATGTaGCCCTGCATCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGREIM*PCILKK
Trigger: CTTCTTCAAGATGCAGGGCCACATGATCTCCCTGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTGTGTCATGGATGGTaGTGTAGCCTCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVCHGW*CSLLVW
Trigger: CCAGACCAAGAGGCTACACCACCATCCATGACACAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGTGTCATGGATGGTaGTGTAGCCTCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVCHGW*CSLLVW
Trigger: CCAGACCAAGAGGCTACACCACCATCCATGACACAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACGTGAACTGTATCCCTaGTCTCTGGCAGGGTCGTAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQARELYP*SLAGSY
Trigger: ATACGACCCTGCCAGAGACCAGGGATACAGTTCACG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTTCCTTGCGATGCTTaGCTCTGTACTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILPCDA*LCTPPH
Trigger: GTGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGCATGCTTAACCCATaGCTGCCTTCCTTGCGATGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISMLNP*LPSLRC
Trigger: GCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTTGGCTGCCTTCTTaGCCATTTCAATGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAWLPS*PFQCLG
Trigger: GCCCAGACATTGAAATGGCCAAGAAGGCAGCCAAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAATCTGGAGTCTCGTTaGCCATGGCATTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQANLESR*PWHSGL
Trigger: GAGGCCTGAATGCCATGGCCAACGAGACTCCAGATT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGAGCTGAAATTCTTTTaGTTTTCTTTAACACGCAGT +
Preference number: 4 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRELKFF*FSLTRS
Trigger: ACTGCGTGTTAAAGAAAACCAAAAGAATTTCAGCTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAGCTGAAATTCTTTTaGTTTTCTTTAACACGCAGT +
Preference number: 4 (lower is better)
Translates to: EVSTEMLPAELQILQTDGELKFF*FSLTRS
Trigger: ACTGCGTGTTAAAGAAAACCAAAAGAATTTCAGCTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGAAGGGTGTCAAGTTaGTACTTGGGGGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRRVSS*YLGVSQ
Trigger: CTGTGAGACCCCCAAGTATCAACTTGACACCCTTCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGCTTTGTGTTCTGCTaGGCCAAAACCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICFVFC*AKTMPM
Trigger: CATGGGCATGGTTTTGGCTCAGCAGAACACAAAGCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTGCAGCAGTCACACTaGACATATCCAGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILQQSH*TYPGVC
Trigger: ACACACCCCTGGATATGTTCAGTGTGACTGCTGCAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATCCAATGCCCTTCATaGAGTCGGCATAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAIQCPS*SRHSLP
Trigger: AGGCAGACTATGCCGACTTCATGAAGGGCATTGGAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATCCAATGCCCTTCATaGAGTCGGCATAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIQCPS*SRHSLP
Trigger: AGGCAGACTATGCCGACTTCATGAAGGGCATTGGAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTAGTTGGTGTTGGTaGTGTTGGCTTGCGCATCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICSWCW*CWLAHP
Trigger: AGGATGCGCAAGCCAACATCACCAACACCAACTACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACGTCAGGGATGCTGGTaGACTTATTTCTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQARQGCW*TYFCLE
Trigger: CTCCAGACAGAAATAAGTTCACCAGCATCCCTGACG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCATGATGTGGATCTaGGTCTTGTCCTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGMMWI*VLSLSQ
Trigger: TTGGGACAAGGACAAGACTCAGATCCACATCATGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGACTCTCGCTGTAGTTaGTTCTGTTCTGCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADSRCS*FCSALP
Trigger: TGGCAAGGCAGAACAGAATCAACTACAGCGAGAGTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGACTCTCGCTGTAGTTaGTTCTGTTCTGCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIDSRCS*FCSALP
Trigger: TGGCAAGGCAGAACAGAATCAACTACAGCGAGAGTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGGCCCTCTTGGCTTTaGCAACTTCCAAGGAACCAA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIWPSWL*QLPRNQ
Trigger: TTGGTTCCTTGGAAGTTGTCAAAGCCAAGAGGGCCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTAATCGATGTCACTaGCAAGGTTCTGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGNRCH*QGSALP
Trigger: AGGAAGGGCAGAACCTTGTCAGTGACATCGATTACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGCTGTACAGACTCTTaGGGTGCTTGGTTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACCTDS*GAWFCR
Trigger: ACGACAGAACCAAGCACCTCAAGAGTCTGTACAGCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTAGTCGATCTCGCTaGCTTTCTTCTGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGSRSR*LSSESP
Trigger: AGGACTCTCAGAAGAAAGTCAGCGAGATCGACTACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCTGTGACTTTGCGATaGTACACAATGTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISVTLR*YTMSRA
Trigger: CGCCCTGGACATTGTGTATCATCGCAAAGTCACAGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGCAGACTTCGGGATTaGATGTTGTCTTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACRLRD*MLSSAG
Trigger: TCCGGCAGAAGACAACATTCAATCCCGAAGTCTGCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGTTGCTGTGGGAGCTaGGTGGTTTTCACATGTTTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRCCGS*VVFTCL
Trigger: CAAACATGTGAAAACCACTCAGCTCCCACAGCAACG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGGGGAAGAAGCCTTTaGCTCTGTCCTCTTCATACT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGGRSL*LCPLHT
Trigger: AGTATGAAGAGGACAGAGGCAAAGGCTTCTTCCCCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATATCACTGGCTTGCTaGGTGTTCTGCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISLAC*VFCFAC
Trigger: GCAGGCAAAGCAGAACACGCAGCAAGCCAGTGATAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTCCCCAGCTTTCTTTaGCTTCTCTACCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALPSFL*LLYLQG
Trigger: TCCTTGGAGGTAGAGAAGGCAAAGAAAGCTGGGGAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCAGCTTCTCGGGGTaGTGGCGATACTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFSFSG*WRYFLS
Trigger: TGAGAGAAAGTATCGCCAGCACCCCGAGAAGCTGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATCTCTGGAGGCCTTTaGAGCCTTTATTGCGATGGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISGGL*SLYCDG
Trigger: GCCATCGCAATAAAGGCTGCAAAGGCCTCCAGAGAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAGCTCGATGTTCATTaGGTCTGGGAGGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQLDVH*VWEEDV
Trigger: TACATCCTCCTCCCAGACGCAATGAACATCGAGCTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGCTCGATGTTCATTaGGTCTGGGAGGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQLDVH*VWEEDV
Trigger: TACATCCTCCTCCCAGACGCAATGAACATCGAGCTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTCCCGGGATGCTTTTaGTGCTTTGATTGGAATGGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILPGCF*CFDWNG
Trigger: GCCATTCCAATCAAAGCAGCAAAAGCATCCCGGGAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCAATCTCCCGGGATaGTTTTGCTGCTTTGATTGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGNLPG*FCCFDW
Trigger: CCAATCAAAGCAGCAAAAGCATCCCGGGAGATTGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTCGCTCAGGATCTCTaGAGCTCTCTTACACTTGAC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVAQDL*SSLTLD
Trigger: GTCAAGTGTAAGAGAGCTGCAGAGATCCTGAGCGAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTCGCTCAGGATCTCTaGAGCTCTCTTACACTTGAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVAQDL*SSLTLD
Trigger: GTCAAGTGTAAGAGAGCTGCAGAGATCCTGAGCGAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTACTCACGGTCACTCTaGACTTTGGCAATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYSRSL*TLAMWR
Trigger: CCTCCACATTGCCAAAGTGCAGAGTGACCGTGAGTA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATACTCACGGTCACTCTaGACTTTGGCAATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYSRSL*TLAMWR
Trigger: CCTCCACATTGCCAAAGTGCAGAGTGACCGTGAGTA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCTTTGCCAGCACCTaGTCCAGCGAGTCGGTTATA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFFAST*SSESVI
Trigger: TATAACCGACTCGCTGGAGCAGGTGCTGGCAAAGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCTTTGCCAGCACCTaGTCCAGCGAGTCGGTTATA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFFAST*SSESVI
Trigger: TATAACCGACTCGCTGGAGCAGGTGCTGGCAAAGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCCATTTGGCCCACTaGAGCCTGTACTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFHLAH*SLYSLS
Trigger: TGAAAGGGAGTACAGGCTGCAGTGGGCCAAATGGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTTCTGAATCTGGCCTaGGTGCTCAAACCAAACCAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVLNLA*VLKPNQ
Trigger: CTGGTTTGGTTTGAGCACGCAGGCCAGATTCAGAAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTTCTGAATCTGGCCTaGGTGCTCAAACCAAACCAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVLNLA*VLKPNQ
Trigger: CTGGTTTGGTTTGAGCACGCAGGCCAGATTCAGAAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATATGGCTGGCCAGGTaGTTCTGGTTCTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIWLAR*FWFLAC
Trigger: ACATGCCAAGAACCAGAAGCACCTGGCCAGCCATAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATATGGCTGGCCAGGTaGTTCTGGTTCTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAIWLAR*FWFLAC
Trigger: ACATGCCAAGAACCAGAAGCACCTGGCCAGCCATAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGGACTTCTGCTTCTTaGCTGAGGCTCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAWTSAS*LRLCTP
Trigger: TGGTGTACAGAGCCTCAGGCAAGAAGCAGAAGTCCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGGACTTCTGCTTCTTaGCTGAGGCTCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIWTSAS*LRLCTP
Trigger: TGGTGTACAGAGCCTCAGGCAAGAAGCAGAAGTCCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCACTTTGCGGACATaGAGCAGCATGGGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFTLRT*SSMGVS
Trigger: TGACACACCCATGCTGCTGCATGTCCGCAAAGTGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCACTTTGCGGACATaGAGCAGCATGGGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFTLRT*SSMGVS
Trigger: TGACACACCCATGCTGCTGCATGTCCGCAAAGTGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTTCATCCTTCACTTTaGGGACATGCAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILHPSL*GHAAAW
Trigger: CCATGCTGCTGCATGTCCGCAAAGTGAAGGATGAAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGACGTGCTTGGTCACTaGCTTGACGTGAACTGTATC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADVLGH*LDVNCI
Trigger: GATACAGTTCACGTCAAGGCAGTGACCAAGCACGTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAGCTAATGTGGTCCTaGGTTTGCTTCACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIELMWS*VCFTLS
Trigger: GCTCAGAGTGAAGCAAACGCAGGACCACATTAGCTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAGCTAATGTGGTCCTaGGTTTGCTTCACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAELMWS*VCFTLS
Trigger: GCTCAGAGTGAAGCAAACGCAGGACCACATTAGCTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAAGGGTGTGGGGGTTaGTTTCCCCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIEGCGG*FPHVLF
Trigger: AAAGAGAACATGGGGAAAGCAACCCCCACACCCTTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAAGGGTGTGGGGGTTaGTTTCCCCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAEGCGG*FPHVLF
Trigger: AAAGAGAACATGGGGAAAGCAACCCCCACACCCTTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAGGACAGTGTTGTCTaGTGGGTGGCAACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIEDSVV*WVATED
Trigger: ATCTTCAGTTGCCACCCAGCAGACAACACTGTCCTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTAAGGGGGTCCCCTTaGTCAGGTTCTCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVRGSP*SGSLCT
Trigger: TGTACAAAGAGAACCTGAGCAAGGGGACCCCCTTAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTAAGGGGGTCCCCTTaGTCAGGTTCTCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVRGSP*SGSLCT
Trigger: TGTACAAAGAGAACCTGAGCAAGGGGACCCCCTTAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGTTCTTGACGGCTTaGACAAGTTCAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVFLTA*TSSGAS
Trigger: TGATGCCCCTGAACTTGTCCAAGCCGTCAAGAACAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTTTGGAATTGACCTaGGCTTGCACCAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICLELT*ACTRTG
Trigger: TCCTGTCCTGGTGCAAGCCCAGGTCAATTCCAAACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTTTGGAATTGACCTaGGCTTGCACCAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACLELT*ACTRTG
Trigger: TCCTGTCCTGGTGCAAGCCCAGGTCAATTCCAAACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTATAATGGACCAACTTaGGGTCGTCCTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYNGPT*GRPGGF
Trigger: GAAGCCTCCAGGACGACCCCAAGTTGGTCCATTATA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATAATGGACCAACTTaGGGTCGTCCTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYNGPT*GRPGGF
Trigger: GAAGCCTCCAGGACGACCCCAAGTTGGTCCATTATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTACCGGGTCTTGCTaGCCTCATATCCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGTGSC*PHIPSY
Trigger: ATAAGAAGGGATATGAGGCCAGCAAGACCCGGTACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGAGAGCAAGATGTCTaGAGTGTCAGGCATGACATG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGEQDV*SVRHDM
Trigger: CATGTCATGCCTGACACTCCAGACATCTTGCTCTCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGAGAGCAAGATGTCTaGAGTGTCAGGCATGACATG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGEQDV*SVRHDM
Trigger: CATGTCATGCCTGACACTCCAGACATCTTGCTCTCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGTCTGGCATGACATaGATGGAGGCTTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVSGMT*MEALSA
Trigger: TGCTGACAAAGCCTCCATCCATGTCATGCCAGACAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTGTCTGGCATGACATaGATGGAGGCTTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVSGMT*MEALSA
Trigger: TGCTGACAAAGCCTCCATCCATGTCATGCCAGACAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTTGGTCTTCCATTTaGCCCACTGCAGCCTGTACT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITWSSI*PTAACT
Trigger: AGTACAGGCTGCAGTGGGCCAAATGGAAGACCAAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCAGTGTGCAGCAGTaGGGTTTCTGTAAGGGTATA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGSVQQ*GFCKGI
Trigger: TATACCCTTACAGAAACCCCACTGCTGCACACTGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCAGAATGTAGCCTGTaGCTTTCTGTTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAECSL*LSVSPS
Trigger: GCTGGGAGAAACAGAAAGCCACAGGCTACATTCTGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCAGAATGTAGCCTGTaGCTTTCTGTTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAECSL*LSVSPS
Trigger: GCTGGGAGAAACAGAAAGCCACAGGCTACATTCTGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGGAAATCCAGGCAGTaGACCACACCAGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAWKSRQ*TTPGNS
Trigger: TGAGTTTCCTGGTGTGGTCCACTGCCTGGATTTCCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGGAAATCCAGGCAGTaGACCACACCAGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIWKSRQ*TTPGNS
Trigger: TGAGTTTCCTGGTGTGGTCCACTGCCTGGATTTCCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTCTTCGCCAGCACGTaGTTCATCATGTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALFAST*FIMSLG
Trigger: TCCCAATGACATGATGAACCACGTGCTGGCGAAGAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCAGGTTATAGCTGGTaGCTTTCACCTTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAGYSW*LSPYPR
Trigger: CCTGGGATAAGGTGAAAGCCACCAGCTATAACCTGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCAGGTTATAGCTGGTaGCTTTCACCTTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAGYSW*LSPYPR
Trigger: CCTGGGATAAGGTGAAAGCCACCAGCTATAACCTGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCACCGTTTTTGTAGTTaGGGCCACTTTGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHRFCS*GHFASD
Trigger: GTCAGAGGCAAAGTGGCCCCAACTACAAAAACGGTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTGACTCTCCGGACATaGACAAACGGGACATCCTTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALTLRT*TNGTSL
Trigger: CAAGGATGTCCCGTTTGTCCATGTCCGGAGAGTCAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCCGGTCAGCCACTGTaGTGTAATGCAGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAGQPL*CNADSL
Trigger: AAGAGAATCTGCATTACACCACAGTGGCTGACCGGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTGTGGCTTCTCTGTaGTGTAGCTGTTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASVASL*CSCSRL
Trigger: CAACCTGGAACAGCTACACCACAGAGAAGCCACAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATACTCTGCAGCTCTGTaGCTTCTCTGTGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYSAAL*LLCGVA
Trigger: AGCTACACCACAGAGAAGCCACAGAGCTGCAGAGTA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCTGAGTGGCATTCTTaGCTCTCAGCATGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISEWHS*LSACQE
Trigger: CTCCTGACATGCTGAGAGCCAAGAATGCCACTCAGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGGCTGAAGTTCTTCTaGTTCTCGCGGACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQARLKFF*FSRTLC
Trigger: GCAAAGAGTCCGCGAGAACCAGAAGAACTTCAGCCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGGCTGAAGTTCTTCTaGTTCTCGCGGACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRLKFF*FSRTLC
Trigger: GCAAAGAGTCCGCGAGAACCAGAAGAACTTCAGCCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAGCTAATGTGCTTCTaGGTCTCCTTGACGCGTTTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIELMCF*VSLTRF
Trigger: GAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAGCTAATGTGCTTCTaGGTCTCCTTGACGCGTTTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAELMCF*VSLTRF
Trigger: GAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGGGTCTGTCACCACTaGTGTAAAGCAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQARVCHH*CKAAFV
Trigger: CACAAAGGCTGCTTTACACCAGTGGTGACAGACCCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGGGTCTGTCACCACTaGTGTAAAGCAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRVCHH*CKAAFV
Trigger: CACAAAGGCTGCTTTACACCAGTGGTGACAGACCCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTGTTGTCTGCTGGGTaGCAACTGAAGATGACCGTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVLSAG*QLKMTV
Trigger: AACGGTCATCTTCAGTTGCCACCCAGCAGACAACAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTCAGCCTTGTAGATaGCATCACTCTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGQPCR*HHSVGR
Trigger: ACGACCTACAGAGTGATGCCATCTACAAGGCTGACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAGCAGTGGGTTCTCTaGAGCAGGGAGTACATTATA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIEQWVL*SREYII
Trigger: TATAATGTACTCCCTGCTTCAGAGAACCCACTGCTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAGCAGTGGGTTCTCTaGAGCAGGGAGTACATTATA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAEQWVL*SREYII
Trigger: TATAATGTACTCCCTGCTTCAGAGAACCCACTGCTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGGTCTCACAGTAATTaGTGCTCCTTGCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGSHSN*CSLLWS
Trigger: AGACCAAAGCAAGGAGCATCAATTACTGTGAGACCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTGGTCGCAACTTCCTaGGATTTCTTTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALVATS*DFFAAV
Trigger: GACTGCTGCAAAGAAATCTCAGGAAGTTGCGACCAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTCCATGGAATATGTaGACTTCAGCTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACPWNM*TSASRG
Trigger: ACCCCGAGAAGCTGAAGTTCACATATTCCATGGACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTCCATGGAATATGTaGACTTCAGCTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICPWNM*TSASRG
Trigger: ACCCCGAGAAGCTGAAGTTCACATATTCCATGGACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGTCAGGCATGACATaGATGCTGGTCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVSGMT*MLVLSL
Trigger: CAAAGACAAGACCAGCATTCATGTCATGCCTGACAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTGTCAGGCATGACATaGATGCTGGTCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVSGMT*MLVLSL
Trigger: CAAAGACAAGACCAGCATTCATGTCATGCCTGACAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGATGTACTTGTGAATaGGGCGCTTGTAGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGCTCE*GACSWC
Trigger: ACACCAACTACAAGCGCCTCATTCACAAGTACATCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTCATCTTGCACACTaGGGAATCCAATATGGTGTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGHLAH*GIQYGV
Trigger: GACACCATATTGGATTCCTCAGTGTGCAAGATGACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGCTTTTGCTGCTTTaGTTGGAATGGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMLLLL*LEWRPQ
Trigger: CTGTGGACGCCATTCCAATCAAAGCAGCAAAAGCAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGCCTTTCAGCCACTaGAGATCAGCCTTGTACACA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMPFSH*RSALYT
Trigger: TGTGTACAAGGCTGATCTTCAGTGGCTGAAAGGCAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGGTCACTCAGGATCTaGGTGGCTCGTTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIWSLRI*VARLFF
Trigger: GAAAAACAAACGAGCCACTCAGATCCTGAGTGACCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCATTCGCGCCAACATaGTTTCTGGTGTATCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASFAPT*FLVYLA
Trigger: TGCCAGATACACCAGAAATCATGTTGGCGCGAATGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGTCGGTTATACTGGTaGATTTCAGTGTGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISRLYW*ISVCRD
Trigger: GTCCCGACACACTGAAATTCACCAGTATAACCGACT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTACTCCCTTTCATTCTaGATCTTGCCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYSLSF*ILPAMR
Trigger: CCTCATCGCTGGCAAGATTCAGAATGAAAGGGAGTA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATACTCCCTTTCATTCTaGATCTTGCCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYSLSF*ILPAMR
Trigger: CCTCATCGCTGGCAAGATTCAGAATGAAAGGGAGTA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGCCTTTCAGCCAGGTaGGGTCATCCTTGTATACAA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACLSAR*GHPCIQ
Trigger: TTGTATACAAGGATGACCTCACCTGGCTGAAAGGCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTTCTTGTGTCTTCTTaGCTTGGCGGATTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALLVSS*LGGFQV
Trigger: CACCTGAAATCCGCCAAGTCAAGAAGACACAAGAAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTATTAAGGAATTCCTaGGGGCCAGCACCATGTCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALLRNS*GPAPCL
Trigger: AAGACATGGTGCTGGCCCTCAGGAATTCCTTAATAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTATTAAGGAATTCCTaGGGGCCAGCACCATGTCTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILLRNS*GPAPCL
Trigger: AAGACATGGTGCTGGCCCTCAGGAATTCCTTAATAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTCAGCCTTATATTTaGCCTCGCTTGCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGQPYI*PRLQGC
Trigger: ACAACCTTGCAAGCGAGGTCAAATATAAGGCTGACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTCAGCCTTATATTTaGCCTCGCTTGCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGQPYI*PRLQGC
Trigger: ACAACCTTGCAAGCGAGGTCAAATATAAGGCTGACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCTCATTGAGGATCTaGGTGGCATTCTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFSLRI*VAFLAL
Trigger: GAGAGCCAAGAATGCCACTCAGATCCTCAATGAGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCTCATTGAGGATCTaGGTGGCATTCTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFSLRI*VAFLAL
Trigger: GAGAGCCAAGAATGCCACTCAGATCCTCAATGAGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGGCACCGATCATCTTaGCTTTGCTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGHRSS*LCSSHS
Trigger: ACTATGAGAAGAGCAAAGGCAAGATGATCGGTGCCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGGCACCGATCATCTTaGCTTTGCTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGHRSS*LCSSHS
Trigger: ACTATGAGAAGAGCAAAGGCAAGATGATCGGTGCCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTTTGCAGCCTTTATTaGGATGGCATCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALCSLY*DGIRLE
Trigger: CTCAAGCCTGATGCCATCGCAATAAAGGCTGCAAAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTTTGCAGCCTTTATTaGGATGGCATCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILCSLY*DGIRLE
Trigger: CTCAAGCCTGATGCCATCGCAATAAAGGCTGCAAAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTGCGGAAGCCAATGTaGTTCCCTTTGGATTGTTCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILRKPM*FPLDCS
Trigger: TGAACAATCCAAAGGGAAGCACATTGGCTTCCGCAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGATTCTGTTCTGCCTTaGCAGCATAATCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADSVLP*QHNLRC
Trigger: ACACCGGAGATTATGCTGGCAAGGCAGAACAGAATC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTCAGGATTTCACCTaGTCTCTTCACCTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITQDFT*SLHLLD
Trigger: GTCGAGAAGGTGAAGAGAGCAGGTGAAATCCTGAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACTGTAAATCTTCCCTaGGTGCATGGCGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQATVNLP*VHGAKD
Trigger: ATCCTTTGCGCCATGCACGCAGGGAAGATTTACAGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCCTCGCTGCTTAACGTaGTCAGCTTTGTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIPRCLT*SALYFS
Trigger: GCTGAAATACAAAGCTGAGCACGTTAAGCAGCGAGG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCTCGCTGCTTAACGTaGTCAGCTTTGTATTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPRCLT*SALYFS
Trigger: GCTGAAATACAAAGCTGAGCACGTTAAGCAGCGAGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCACCAGGTCAGCATaGTTGGCTCCAACAATTGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFTRSA*LAPTIG
Trigger: TCCAATTGTTGGAGCCAAGCATGCTGACCTGGTGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCACCAGGTCAGCATaGTTGGCTCCAACAATTGGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFTRSA*LAPTIG
Trigger: TCCAATTGTTGGAGCCAAGCATGCTGACCTGGTGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCATTGACTCTGTGCTaGATGAATTCCGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAALTLC*MNSGAS
Trigger: AGATGCACCGGAATTCATCCAGCACAGAGTCAATGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCATTGACTCTGTGCTaGATGAATTCCGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIALTLC*MNSGAS
Trigger: AGATGCACCGGAATTCATCCAGCACAGAGTCAATGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTAGCTTGGGTGACTTaGATCATGTCAAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILAWVT*IMSRGA
Trigger: AGCCCCTCTTGACATGATCCAAGTCACCCAAGCTAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATAGTCCACGTCGCTaGCAATCGCCTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYSPRR*QSPEIS
Trigger: AGAAATCTCAGGCGATTGCCAGCGACGTGGACTATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCGCTCCTCTGGGCCTaGTTAATTTTAGACTGCACT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASLLWA*LILDCT
Trigger: AGTGCAGTCTAAAATTAACCAGGCCCAGAGGAGCGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCGCTCCTCTGGGCCTaGTTAATTTTAGACTGCACT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISLLWA*LILDCT
Trigger: AGTGCAGTCTAAAATTAACCAGGCCCAGAGGAGCGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATGCCCATGGAGTCTaGCACACTTGTGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHAHGV*HTCELD
Trigger: ATCAAGTTCACAAGTGTGCCAGACTCCATGGGCATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCAAGTCGTAACCCTTaGCCAGCGTTTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASSRNP*PAFSSS
Trigger: ACTGGAAGAAAACGCTGGCCAAGGGTTACGACTTGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGATGGGAATGGCATCTaGTCTCAAGTCGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADGNGI*SQVVTL
Trigger: AAGGGTTACGACTTGAGACCAGATGCCATTCCCATC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCACTCTGGATTTGCATaGCATTCCTGGAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHSGFA*HSWSVP
Trigger: TGGAACACTCCAGGAATGCCATGCAAATCCAGAGTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGTCCACCGGGGTGTaGAAAGATGTCTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMSTGV*KDVLDF
Trigger: GAAATCCAAGACATCTTTCCACACCCCGGTGGACAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGATGTTCATTGCGTCTaGGAGGAGGATGTACTTGTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIDVHCV*EEDVLV
Trigger: CACAAGTACATCCTCCTCCCAGACGCAATGAACATC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTGAGGAATCCAATATaGTGTCCCAGTTGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALRNPI*CPSCFR
Trigger: CCGGAAACAACTGGGACACCATATTGGATTCCTCAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTGAGGAATCCAATATaGTGTCCCAGTTGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILRNPI*CPSCFR
Trigger: CCGGAAACAACTGGGACACCATATTGGATTCCTCAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGGACCACATCATCTTaGGATCATCATGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGTTSS*DHHVSL
Trigger: GAGCGATACATGATGATCCCAAGATGATGTGGTCCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGCACTTTGGCAATGTaGAGGGACCACATCATCTTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICTLAM*RDHIIL
Trigger: CAAGATGATGTGGTCCCTCCACATTGCCAAAGTGCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCACAGAGGATCTCCTaGGCATTTTTGACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISQRIS*AFLTLR
Trigger: CCTGAGAGTCAAAAATGCCCAGGAGATCCTCTGTGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTTGTAACCCTCACATaGTCCACAGAATCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFVTLT*STESRG
Trigger: CCCTCTGGATTCTGTGGACCATGTGAGGGTTACAAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCCATGTCTTTGGAGTaGGAGATGTATGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPMSLE*EMYGVS
Trigger: AGACACACCATACATCTCCCACTCCAAAGACATGGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCCCATGTCTTTGGAGTaGGAGATGTATGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIPMSLE*EMYGVS
Trigger: AGACACACCATACATCTCCCACTCCAAAGACATGGG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTTTCCCCATGTCTTTaGAGTGGGAGATGTATGGTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVSPCL*SGRCMV
Trigger: CACCATACATCTCCCACTCCAAAGACATGGGGAAAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACACCGCGCTGTGTTTaGATCGTCGTCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQATPRCV*IVVNTF
Trigger: AAAAGTGTTGACGACGATCCAAACACAGCGCGGTGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTTGTAAGTCAGGGTaGCAAATCCACTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITCKSG*QIHSWR
Trigger: CCTCCATGAGTGGATTTGCCACCCTGACTTACAAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCAGTCACAGGTTTGTaGAGTTTCTTCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASVTGL*SFFRSA
Trigger: GGCTGACCTGAAGAAACTCCACAAACCTGTGACTGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTACAGGTAGTCACTaGCAATATCCCGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACTGSH*QYPEKP
Trigger: AGGCTTCTCGGGATATTGCCAGTGACTACCTGTACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGGAGCATCTTCAATTaGGGTAAACTTGAGCGTATC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGSIFN*GKLERI
Trigger: GATACGCTCAAGTTTACCTCAATTGAAGATGCTCCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTAGTTGGTATTGCTaGTCACATCCTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACSWYC*SHPVPS
Trigger: AGAAGGCACAGGATGTGATCAGCAATACCAACTACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGCTTAGGGTCATCCTaGAGACTGAGAAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASLGSS*RLRKPI
Trigger: AATTGGCTTTCTCAGTCTTCAGGATGACCCTAAGCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACGGGGATATCAGGCATaGTGTGGATTTTTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQARGYQA*CGFLSC
Trigger: ACAAGACAAAAATCCACATCATGCCTGATATCCCCG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAATTGCATCCGTTCTaGGGTCATAGCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIELHPF*GHSLSF
Trigger: GAAAGAAAGGCTATGACCTCAGAACGGATGCAATTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTCACTGATGATTTCTaGAGCCCGCTTGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALTDDF*SPLVLF
Trigger: GAAAAGAACAAGCGGGCTTCAGAAATCATCAGTGAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTATTCCAGGCTTCCTaGTACAGCCTCTCACTCATT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILFQAS*YSLSLI
Trigger: AATGAGTGAGAGGCTGTATCAGGAAGCCTGGAATAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCAGCATGTTTGGCATaGTTGACAGAGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAACLA*LTETES
Trigger: TGATTCTGTCTCTGTCAATCATGCCAAACATGCTGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAAACTGGCGTATCTGTaGCCAGGTTATAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAKLAYL*PGYSSA
Trigger: TGCAGAACTATAACCTGGTCACAGATACGCCAGTTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAAACTGGCGTATCTGTaGCCAGGTTATAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIKLAYL*PGYSSA
Trigger: TGCAGAACTATAACCTGGTCACAGATACGCCAGTTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTGGCCCTGCATCTTaGAGAAGTCTGATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICGPAS*RSLICR
Trigger: TCTACAAATCAGACTTCTTCAAGATGCAGGGCCACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTGGCCCTGCATCTTaGAGAAGTCTGATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACGPAS*RSLICR
Trigger: TCTACAAATCAGACTTCTTCAAGATGCAGGGCCACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCGCTGCTTTGATATaGACAGCATCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFAALI*TASGLM
Trigger: CATCAAGCCAGATGCTGTTCATATCAAAGCAGCGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAGACTCTTTGGCAGTaGTGTATGTTGGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAETLWQ*CMLESQ
Trigger: TTGAGACTCCAACATACATCACTGCCAAAGAGTCTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGGTTCTTCACTTGCTaGGCATGGATAATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQARFFTC*AWIISG
Trigger: CCCAGAAATTATCCATGCTCAGCAAGTGAAGAACCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCTGTAATGGTATCTTaGTCCTGGTCATTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPVMVS*SWSFRF
Trigger: AAAGCGGAATGACCAGGATCAAGATACCATTACAGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACCTTGCTGACTTGCTaGGACACTTTCTTAGCATGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITLLTC*DTFLAC
Trigger: ACATGCTAAGAAAGTGTCGCAGCAAGTCAGCAAGGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACTCAGGGCATCCCCTaGCTTTTTAACTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQATQGIP*LFNFLL
Trigger: CAAGAGAAAGTTAAAAAGGCAGGGGATGCCCTGAGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAAAGCCAATTTGCTTaGCTCTGGCTTTCTCATAGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIESQFA*LWLSHR
Trigger: CCTATGAGAAAGCCAGAGGCAAGCAAATTGGCTTTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTACTCTCGATCAGACTaGATCTTAGCCACTTGCATG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYSRSD*ILATCM
Trigger: CATGCAAGTGGCTAAGATGCAGTCTGATCGAGAGTA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAAGGTATCCAGCCAATaGCTTTCAGCCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIKVSSQ*LSATED
Trigger: ATCTTCAGTGGCTGAAAGGCATTGGCTGGATACCTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCATGTCCACAGGGCTaGTGTATCTTGTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAACPQG*CILSCI
Trigger: AATACAAGACAAGATACAGCAGCCCTGTGGACATGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGATGGCATTACTCTTTaGCAGGACAATTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIDGITL*QDNFWG
Trigger: ACCCCAGAAATTGTCCTGGCAAAGAGTAATGCCATC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGATTTCAATGGCATCTaGTCGCAAGTCGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADFNGI*SQVVAF
Trigger: AAAGGCTACGACTTGCGAGCAGATGCCATTGAAATC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGGCACTTCTTCGAATaGAGGATAGAAAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIWHFFE*RIESMS
Trigger: GGACATGCTTTCTATCCTGCATTCGAAGAAGTGCCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGTCCACTTCCAGTATaGTTTATTGGCTTCGTACTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRPLPV*FIGFVL
Trigger: CAGTACGAAGCCAATAAAGCATACTGGAAGTGGACG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATTTCACGATACTCTaGAGCTCTGTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYFTIL*SSVASL
Trigger: CAGAGAAGCCACAGAGCTGCAGAGTATCGTGAAATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTTGGTTACTTTCTTaGCAAATTCGACCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGWLLS*QIRPQE
Trigger: CTCCTGAGGTCGAATTTGCCAAGAAAGTAACCAACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTTGGTTACTTTCTTaGCAAATTCGACCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGWLLS*QIRPQE
Trigger: CTCCTGAGGTCGAATTTGCCAAGAAAGTAACCAACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAACTTTGTCTTATCTaGGTGGACTTTGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIELCLI*VDFVGV
Trigger: CACGCCTACAAAGTCCACCCAGATAAGACAAAGTTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAACTTTGTCTTATCTaGGTGGACTTTGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAELCLI*VDFVGV
Trigger: CACGCCTACAAAGTCCACCCAGATAAGACAAAGTTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCAATATCGCTCCTCTaGGCCTGGTTAATTTTAGAC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAISLL*AWLILD
Trigger: GTCTAAAATTAACCAGGCCCAGAGGAGCGATATTGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAATTTCCTCCCCCTTaGCTTTGTAAGCAATATCGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIEFPPP*LCKQYR
Trigger: GCGATATTGCTTACAAAGCCAAGGGGGAGGAAATTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCGTCTTGGAGACTTTaGAATCCGACCATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISSWRL*NPTIFP
Trigger: AGGGAAAATGGTCGGATTCCAAAGTCTCCAAGACGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGTTTAGGATCGTCTTaGAGACTTTGGAATCCGACC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISLGSS*RLWNPT
Trigger: GGTCGGATTCCAAAGTCTCCAAGACGATCCTAAACT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGTTTAGGATCGTCTTaGAGACTTTGGAATCCGACC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASLGSS*RLWNPT
Trigger: GGTCGGATTCCAAAGTCTCCAAGACGATCCTAAACT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTGCATGGCATTCCTaGAGTGTTCCACATTCAAGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFAWHS*SVPHSR
Trigger: CCTTGAATGTGGAACACTCCAGGAATGCCATGCAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGGAGTATGGTAGCTaGTCTTCGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQEYGS*SSSSHS
Trigger: ACTATGAGAAGACGAAGACCAGCTACCATACTCCTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTCAACTTTTTAAACTaGAAGGTGCTGGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVNFLN*KVLGCC
Trigger: GCAGCATCCCAGCACCTTCCAGTTTAAAAAGTTGAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGCTTGCAAAATATCTaGTGTATCCGGCATCACATG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGLQNI*CIRHHM
Trigger: CATGTGATGCCGGATACACCAGATATTTTGCAAGCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCTTGCAAAATATCTaGTGTATCCGGCATCACATG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGLQNI*CIRHHM
Trigger: CATGTGATGCCGGATACACCAGATATTTTGCAAGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTCTGTCTGGAGGTTaGCGGTATTTCTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFLSGG*RYFFSL
Trigger: CAGTGAGAAGAAATACCGCCAACCTCCAGACAGAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTTGCCAAGACCATTaGCATGGAGTCCATAAGGCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFCQDH*HGVHKA
Trigger: AGCCTTATGGACTCCATGCCAATGGTCTTGGCAAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTTTGCCAAGACCATTaGCATGGAGTCCATAAGGCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFCQDH*HGVHKA
Trigger: AGCCTTATGGACTCCATGCCAATGGTCTTGGCAAAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAACTTCAGGGGTATCTaGCATAATGTGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSINFRGI*HNVDSG
Trigger: ACCACTGTCCACATTATGCCAGATACCCCTGAAGTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAACTTCAGGGGTATCTaGCATAATGTGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQANFRGI*HNVDSG
Trigger: ACCACTGTCCACATTATGCCAGATACCCCTGAAGTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGGACCACATCATCTTaGGGTCATCATGTATACCAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIWTTSS*GHHVYH
Trigger: GTGGTATACATGATGACCCCAAGATGATGTGGTCCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGCCACAATGGGAATaGCATCACTTCTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQPQWE*HHFSSH
Trigger: ATGACTTGAGAAGTGATGCCATTCCCATTGTGGCTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGCCAGGACAACTTCTaGAGTATCAACAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACQDNF*SINNGG
Trigger: ACCTCCATTGTTGATACTCCAGAAGTTGTCCTGGCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTTGGCTCCAACAATTaGAATATAGCGCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILGSNN*NIALIQ
Trigger: CTGGATGAGCGCTATATTCCAATTGTTGGAGCCAAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTTGGCTCCAACAATTaGAATATAGCGCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALGSNN*NIALIQ
Trigger: CTGGATGAGCGCTATATTCCAATTGTTGGAGCCAAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCCAGGTCAGCATGCTTaGCTCCAACAATTGGAATAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIPGQHA*LQQLEY
Trigger: ATATTCCAATTGTTGGAGCCAAGCATGCTGACCTGG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTATGATTTCTTGGCATaGAGAATCTGGGGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYDFLA*RIWGVS
Trigger: GGACACACCCCAGATTCTCCATGCCAAGAAATCATA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATGATTTCTTGGCATaGAGAATCTGGGGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYDFLA*RIWGVS
Trigger: GGACACACCCCAGATTCTCCATGCCAAGAAATCATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTCATATGATTTCTTaGCATGGAGAATCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGHMIS*HGESGV
Trigger: CACCCCAGATTCTCCATGCCAAGAAATCATATGACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACAATGTCGCTGATCTaGTCTGTCACTTTTCTGACG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQATMSLI*SVTFLT
Trigger: CGTCAGAAAAGTGACAGACCAGATCAGCGACATTGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTAGCCTCTTGGTCTaGCCTTGTTGTATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACSLLV*PCCIPV
Trigger: AACTGGAATACAACAAGGCCAGACCAAGAGGCTACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTTTCGGGTTGTATTTaGGTGTTTTGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILSGCI*VFCPSP
Trigger: AGGAGAAGGGCAAAACACCCAAATACAACCCGAAAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTCAAAGTCCAGCATaGGCTTGCCTCGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASQSPA*ACLVLF
Trigger: AAAAAGAACGAGGCAAGCCCATGCTGGACTTTGAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGCAGTGATGTATGTTaGAGTCTCAAAGTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGSDVC*SLKVQH
Trigger: ATGCTGGACTTTGAGACTCCAACATACATCACTGCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGCAGTGATGTATGTTaGAGTCTCAAAGTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGSDVC*SLKVQH
Trigger: ATGCTGGACTTTGAGACTCCAACATACATCACTGCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGGAGTGACAGGCGTTaGTGTTGCTTTTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAWSDRR*CCFSHV
Trigger: AACATGAGAAAAGCAACACCAACGCCTGTCACTCCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGATGGCATTCAGTTTaGACTGCAACATCACAGGTA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGWHSV*TATSQV
Trigger: TACCTGTGATGTTGCAGTCCAAACTGAATGCCATCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCTCAAAGTCTTCCTaGTACTTCCTTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFSKSS*YFLELR
Trigger: TCTCAGCTCAAGGAAGTATCAGGAAGACTTTGAGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCTCAAAGTCTTCCTaGTACTTCCTTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFSKSS*YFLELR
Trigger: TCTCAGCTCAAGGAAGTATCAGGAAGACTTTGAGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGAGAGTCTGTGACTTaGGTGAACTTTGTCTTATCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGESVT*VNFVLS
Trigger: AGATAAGACAAAGTTCACTCAAGTCACAGACTCTCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTCTTATCACTGTTTTaGGCAGAAACCTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILLSLF*AETFMQ
Trigger: CTGCATGAAGGTTTCTGCTCAAAACAGTGATAAGAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTCTTATCACTGTTTTaGGCAGAAACCTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALLSLF*AETFMQ
Trigger: CTGCATGAAGGTTTCTGCTCAAAACAGTGATAAGAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATCCACTGGAGATCTaGCTTGTACACATTATCACT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHPLEI*LVHIIT
Trigger: AGTGATAATGTGTACAAGTCAGATCTCCAGTGGATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTCGCTTGTTCATGGTaGTTGCATTATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVACSW*LHYSLP
Trigger: TGGCAAAGAATAATGCAATCACCATGAACAAGCGAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATAGTCCTTCATCTTTaGTTCATCCCATCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIVLHL*FIPSLG
Trigger: ACCAAGGGATGGGATGAATCAAAGATGAAGGACTAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATGTTTGGCATGATTaGCAGAGACAGAATCATTCG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHVWHD*QRQNHS
Trigger: CGAATGATTCTGTCTCTGTCAATCATGCCAAACATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATGTTTGGCATGATTaGCAGAGACAGAATCATTCG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHVWHD*QRQNHS
Trigger: CGAATGATTCTGTCTCTGTCAATCATGCCAAACATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTCTGGAGGTCATATaGTTTCTTGGCATGGAGAAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITLEVI*FLGMEN
Trigger: ATTCTCCATGCCAAGAAATCATATGACCTCCAGAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTCGGGCACGATGTTaGTTTTCATCTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACRARC*FSSCSS
Trigger: AGAAGAACAAGATGAAAATCAACATCGTGCCCGACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTCGGGCACGATGTTaGTTTTCATCTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICRARC*FSSCSS
Trigger: AGAAGAACAAGATGAAAATCAACATCGTGCCCGACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTCACTTTTCTGACGTaGCTGTTGACTTGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVTFLT*LLTCKS
Trigger: TGACTTACAAGTCAACAGTCACGTCAGAAAAGTGAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTATACAATGTCGCTaGTCTGGTCTGTCACTTTTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACIQCR*SGLSLF
Trigger: GAAAAGTGACAGACCAGATCAGCGACATTGTATACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTACAAATTCTCACTCTaGAGCTTGTATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYKFSL*SLYAWR
Trigger: CCTCCATGCATACAAGCTTCAGAGTGAGAATTTGTA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTACCCATTTGCCTTaGTGTGTTCATAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICTHLP*CVHRLL
Trigger: AAGAAGCCTATGAACACATCAAGGCAAATGGGTACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTACCCATTTGCCTTaGTGTGTTCATAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACTHLP*CVHRLL
Trigger: AAGAAGCCTATGAACACATCAAGGCAAATGGGTACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTAGATCAACTCACTaGCAGCTTCTTGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACRSTH*QLLVSS
Trigger: AGAAGACACAAGAAGCTGTCAGTGAGTTGATCTACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTATCAGGAACTGAAGTaGAGATGGACTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYQELK*RWTSAS
Trigger: AGAAGCAGAAGTCCATCTTCACTTCAGTTCCTGATA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGTCCAGATTTGTGTTaGCTTTGTAGGCATCTTTCG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASPDLC*LCRHLS
Trigger: CGAAAGATGCCTACAAAGTCAACACAAATCTGGACT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGACAGTCTCATAATATaGCATGGACTTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADSLII*HGLLCI
Trigger: GATGCAGAGAAGTCCATGTCATATTATGAGACTGTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGACAGTCTCATAATATaGCATGGACTTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIDSLII*HGLLCI
Trigger: GATGCAGAGAAGTCCATGTCATATTATGAGACTGTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGATATTTCACTGTTaGGATGTGCCGTTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMIFHC*DVPLGF
Trigger: GAAACCCAACGGCACATCTCAACAGTGAAATATCAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGATATTTCACTGTTaGGATGTGCCGTTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMIFHC*DVPLGF
Trigger: GAAACCCAACGGCACATCTCAACAGTGAAATATCAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATCATAGTCAAAAACTaGACCAGGGTTAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAIIVKN*TRVSTP
Trigger: TGGCGTACTAACCCTGGTTCAGTTTTTGACTATGAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATCATAGTCAAAAACTaGACCAGGGTTAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIIVKN*TRVSTP
Trigger: TGGCGTACTAACCCTGGTTCAGTTTTTGACTATGAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGTTTGTAAGCTGTTaGAGTTGCAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMFVSC*SCREEG
Trigger: GCCTTCTTCTCTGCAACTTCAACAGCTTACAAACAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGTTTGTAAGCTGTTaGAGTTGCAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMFVSC*SCREEG
Trigger: GCCTTCTTCTCTGCAACTTCAACAGCTTACAAACAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAAAACCTTGCTGACTTaGTGCGACACTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAKTLLT*CDTFLA
Trigger: TGCTAAGAAAGTGTCGCAGCAAGTCAGCAAGGTTTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAAAACCTTGCTGACTTaGTGCGACACTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIKTLLT*CDTFLA
Trigger: TGCTAAGAAAGTGTCGCAGCAAGTCAGCAAGGTTTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAAACAATGCCTTGTCTaGTTCCCAGTCTTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIKQCLV*FPVFSV
Trigger: TACACTGAAGACTGGGAAGCAGACAAGGCATTGTTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATAGGGATAAAACAATaGCTTGTCTGCTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIGIKQ*LVCFPV
Trigger: GACTGGGAAGCAGACAAGGCATTGTTTTATCCCTAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGTGTGTCCGGATGTTaGCTGTATTTCTTTTCACTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISVSGC*LYFFSL
Trigger: GAGTGAAAAGAAATACAGGCAACATCCGGACACACT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGTGTGTCCGGATGTTaGCTGTATTTCTTTTCACTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASVSGC*LYFFSL
Trigger: GAGTGAAAAGAAATACAGGCAACATCCGGACACACT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAGCCAGGACATTGTTaGCTTTGGCTATTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQPGHC*LWLLSH
Trigger: ATGACTTAATAGCCAAAGGCAACAATGTCCTGGCTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGCCAGGACATTGTTaGCTTTGGCTATTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQPGHC*LWLLSH
Trigger: ATGACTTAATAGCCAAAGGCAACAATGTCCTGGCTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTATCACTCTGGATTTaGATGGCATTCCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALSLWI*MAFLEC
Trigger: ACACTCCAGGAATGCCATGCAAATCCAGAGTGATAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTTGCTTTTGTTAAGTaGCTGTTCCATGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVAFVK*LFHGVH
Trigger: ATGGACACCATGGAACAGGCACTTAACAAAAGCAAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGATCATCCTCCAGACTaGGAAAACCAACCATTTTTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADHPPD*ENQPFF
Trigger: GAAAAATGGTTGGTTTTCGCAGTCTGGAGGATGATC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGCTTTGGGTCATCTTaGACACTGAGGAATCCAATA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISFGSS*TLRNPI
Trigger: TATTGGATTCCTCAGTGTGCAAGATGACCCAAAGCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTTCAGTGGCCCGTTTaGATTTTTCCACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFQWPV*IFPHPK
Trigger: CTTTGGATGTGGAAAAATGCAAACGGGCCACTGAAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTCAGTGGCCCGTTTaGATTTTTCCACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFQWPV*IFPHPK
Trigger: CTTTGGATGTGGAAAAATGCAAACGGGCCACTGAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCTTGGCCAATACTTaGTCCAGAGAATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFLANT*SRESVT
Trigger: TGTGACTGATTCTCTGGAGCAAGTATTGGCCAAGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTCACTGCTCTGTTTTaGTGTCACATAATCCACTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILTALF*CHIIHS
Trigger: AGAGTGGATTATGTGACAGCAAAACAGAGCAGTGAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTCACTGCTCTGTTTTaGTGTCACATAATCCACTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALTALF*CHIIHS
Trigger: AGAGTGGATTATGTGACAGCAAAACAGAGCAGTGAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTATTTAGGACGTGGTaGATTATCAGAGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVFRTW*IIRDSF
Trigger: GAAGGAGTCTCTGATAATGCACCACGTCCTAAATAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGTCCAGCATGGGCTTaGCTCGTTCTTTTTCATATT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASPAWA*LVLFHI
Trigger: AATATGAAAAAGAACGAGGCAAGCCCATGCTGGACT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCCATTTCTGCCGATTaGTTGTACTTAATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASISAD*LYLIWL
Trigger: CAGCCAGATTAAGTACAAGCAATCGGCAGAAATGGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGACAGGCGTTGGTGTTaGTTTTCTCATGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQADRRWC*FSHVLF
Trigger: AAAGAGAACATGAGAAAAGCAACACCAACGCCTGTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGACATTGTTGCCTTTaGCTATTAAGTCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGHCCL*LLSHAS
Trigger: ACTGGCATGACTTAATAGCCAAAGGCAACAATGTCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGACATTGTTGCCTTTaGCTATTAAGTCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGHCCL*LLSHAS
Trigger: ACTGGCATGACTTAATAGCCAAAGGCAACAATGTCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCACTCATTGTGATCTaGTTTACTCTGGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISLIVI*FTLESK
Trigger: CTTGCTCTCCAGAGTAAACCAGATCACAATGAGTGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAATGTGCTTCCCTTTaGATTGTTCATAGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQCASL*IVHRLA
Trigger: AGCAAGCCTATGAACAATCCAAAGGGAAGCACATTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAATGTGCTTCCCTTTaGATTGTTCATAGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQCASL*IVHRLA
Trigger: AGCAAGCCTATGAACAATCCAAAGGGAAGCACATTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTGATTCATGTTCCTaGTCAGCTCGATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACDSCS*SARCSL
Trigger: CAATGAACATCGAGCTGACCAGGAACATGAATCACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTATTTGTATTCACTaGCAATCTCCCGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICICIH*QSPGML
Trigger: AAGCATCCCGGGAGATTGCCAGTGAATACAAATACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTATTTGTAGTCACTaGCAATATCTCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACICSH*QYLWRP
Trigger: AGGCCTCCAGAGATATTGCCAGTGACTACAAATACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATACAGATTATCACTCTaGAGGTCATATGCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYRLSL*RSYAFR
Trigger: CCGGAAAGCATATGACCTCCAGAGTGATAATCTGTA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGTCTGGCATGACATaGATCGTTTTCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVSGMT*IVFLSL
Trigger: CAATGACAAGAAAACGATCCATGTCATGCCAGACAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTGTCTGGCATGACATaGATCGTTTTCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVSGMT*IVFLSL
Trigger: CAATGACAAGAAAACGATCCATGTCATGCCAGACAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGCCAGGACAATTTCTaGGGTGTCTGTAATACATGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICQDNF*GVCNTC
Trigger: ACATGTATTACAGACACCCCAGAAATTGTCCTGGCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATATTTGTAATCACTaGCAATGTCCCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYICNH*QCPWRP
Trigger: AGGCCTCCAGGGACATTGCCAGTGATTACAAATATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGAGTGGGAGATGTATaGTGTGTCTGGAGAAAATAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGVGDV*CVWRKY
Trigger: ATATTTTCTCCAGACACACCATACATCTCCCACTCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGATATGAACAGCATCTaGCTTGATGGTGCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIDMNSI*LDGAVR
Trigger: TCTAACTGCACCATCAAGCCAGATGCTGTTCATATC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGGTGCTTCTTGACATaGTCCTTGTACTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRCFLT*SLYLFS
Trigger: TGAGAACAAGTACAAGGACCATGTCAAGAAGCACCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGGTGCTTCTTGACATaGTCCTTGTACTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQARCFLT*SLYLFS
Trigger: TGAGAACAAGTACAAGGACCATGTCAAGAAGCACCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTAACCTCACTGAGTTaGTCCTGGACTTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALTSLS*SWTFLI
Trigger: AATCAAGAAAGTCCAGGATCAACTCAGTGAGGTTAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTGTAGATCGTTTTTaGCTTTTCATAGTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICVDRF*LFIVLP
Trigger: CGGAAGGACTATGAAAAGTCAAAAACGATCTACACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTTTATCACTCATTGTaGTCTGGTTTACTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVYHSL*SGLLWR
Trigger: TCTCCAGAGTAAACCAGATCACAATGAGTGATAAAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTTGCAATATCTCTTaGTGCTTTGGCAGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITCNIS*CFGSFD
Trigger: ATCAAAGCTGCCAAAGCATCAAGAGATATTGCAAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTATCCGGCATCACATaGATCTTGGTTTTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVSGIT*ILVLSL
Trigger: TAAAGACAAAACCAAGATTCATGTGATGCCGGATAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTATCCGGCATCACATaGATCTTGGTTTTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVSGIT*ILVLSL
Trigger: TAAAGACAAAACCAAGATTCATGTGATGCCGGATAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTAAGGGTATACTTTaGCTTGATGGCATTCCAATC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICKGIL*LDGIPI
Trigger: GATTGGAATGCCATCAAGTCAAAGTATACCCTTACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTCAGCAGGGATATTaGTTTTGGCCTTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICQQGY*FWPLTY
Trigger: ATAAGTCAAAGGCCAAAATCAATATCCCTGCTGACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTCAGCAGGGATATTaGTTTTGGCCTTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACQQGY*FWPLTY
Trigger: ATAAGTCAAAGGCCAAAATCAATATCCCTGCTGACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTTGTCTTCTGCACGTaGGCTTTATACTTGATATCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALVFCT*ALYLIS
Trigger: TGATATCAAGTATAAAGCTCACGTGCAGAAGACAAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATATTTCAGATCGCTaGCTTCATCCTTCACTTTGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYISDR*LHPSLC
Trigger: GCAAAGTGAAGGATGAAGTCAGCGATCTGAAATATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTATATTTCAGATCGCTaGCTTCATCCTTCACTTTGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYISDR*LHPSLC
Trigger: GCAAAGTGAAGGATGAAGTCAGCGATCTGAAATATA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATTTCTGGCGTGTCTTaGACAACTGTAATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISGVS*TTVIFP
Trigger: AGGGAAAATTACAGTTGTTCAAGACACGCCAGAAAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTATCGCTCTGTATGTaGATCATGTTCTTGGATAGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALSLCM*IMFLDS
Trigger: GCTATCCAAGAACATGATGCACATACAGAGCGATAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTATCGCTCTGTATGTaGATCATGTTCTTGGATAGC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILSLCM*IMFLDS
Trigger: GCTATCCAAGAACATGATGCACATACAGAGCGATAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTATGTTGTAAGCATTaGACTTGGCCTGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALCCKH*TWPGET
Trigger: AGTTTCTCCAGGCCAAGTGCAATGCTTACAACATAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCCTGAGATTTCTTTaGAGCAGTCACACTGAACAT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFLRFL*SSHTEH
Trigger: ATGTTCAGTGTGACTGCTGCAAAGAAATCTCAGGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATGTTGATTGCATTTaGTTTGGCCAAAACGATCTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHVDCI*FGQNDL
Trigger: GAGATCGTTTTGGCCAAAGCAAATGCAATCAACATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATGTTGATTGCATTTaGTTTGGCCAAAACGATCTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHVDCI*FGQNDL
Trigger: GAGATCGTTTTGGCCAAAGCAAATGCAATCAACATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATCGCTCATGTTGATTaGATTTGCTTTGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAIAHVD*ICFGQN
Trigger: GTTTTGGCCAAAGCAAATGCAATCAACATGAGCGAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATCGCTCATGTTGATTaGATTTGCTTTGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIAHVD*ICFGQN
Trigger: GTTTTGGCCAAAGCAAATGCAATCAACATGAGCGAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGCTTTGATAGGAATTaGATCCGTTCTGAGGTCATA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASFDRN*IRSEVI
Trigger: TATGACCTCAGAACGGATGCAATTCCTATCAAAGCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGCATCTTAGCCACTTaGATGGAATGGACTAATTTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICILAT*MEWTNL
Trigger: CAAATTAGTCCATTCCATGCAAGTGGCTAAGATGCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGCATCTTAGCCACTTaGATGGAATGGACTAATTTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACILAT*MEWTNL
Trigger: CAAATTAGTCCATTCCATGCAAGTGGCTAAGATGCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTTGTTCATGGTGATTaGATTATTCTTTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILVHGD*IILCQH
Trigger: GTGCTGGCAAAGAATAATGCAATCACCATGAACAAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTTCTGTATACAAATaGTTGCTCATAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAASVYK*LLIVMA
Trigger: TGCCATCACTATGAGCAAGCATTTGTATACAGAAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCGTAGGCCTTCTTTaGTTGAATAATGTCGTTCTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFVGLL*LNNVVL
Trigger: CAGAACGACATTATTCAAGCAAAGAAGGCCTACGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGTTTATTGCTAATCTaGAAGGCATTGATTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASLLLI*KALIWA
Trigger: GGCCCAAATCAATGCCTTGCAGATTAGCAATAAACT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACACATTAAGAGCGTTTaGTCGAGCGAGATTAATTTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHIKSV*SSEINF
Trigger: GAAATTAATCTCGCTCGAGCAAACGCTCTTAATGTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCACATTAAGAGCGTTTaGTCGAGCGAGATTAATTTC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHIKSV*SSEINF
Trigger: GAAATTAATCTCGCTCGAGCAAACGCTCTTAATGTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTCACTGAAGATATCTaGAGCATGTTTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILTEDI*SMFGMI
Trigger: AATCATGCCAAACATGCTGCAGATATCTTCAGTGAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTCACTGAAGATATCTaGAGCATGTTTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALTEDI*SMFGMI
Trigger: AATCATGCCAAACATGCTGCAGATATCTTCAGTGAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTCATAAGCATGCTTTaGATGGAGAATTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVISML*MENFRS
Trigger: ACTCCTGAAATTCTCCATGCAAAGCATGCTTATGAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGCCTTTTCCATTTCTaGCGATTGCTTGTACTTAAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGLFHF*RLLVLN
Trigger: ATTAAGTACAAGCAATCGGCAGAAATGGAAAAGGCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGTTCCTTGTCCGATTaGTTCTTTATACTTGACCGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASSLSD*FFILDR
Trigger: TCGGTCAAGTATAAAGAAGCAATCGGACAAGGAACT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTCAAGTTGATACTTaGGGGTCTCACAGTAATTCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACQVDT*GSHSNS
Trigger: TGAATTACTGTGAGACCCCCAAGTATCAACTTGACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTGGAAAGATGTCTTaGATTTCTCATAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICGKMS*ISHSPS
Trigger: AGAAGGGCTATGAGAAATCCAAGACATCTTTCCACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGTTTGATTCTGCTTaGCTTGCAAAATATCTGGTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVFDSA*LAKYLV
Trigger: CACCAGATATTTTGCAAGCCAAGCAGAATCAAACAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAACTTATTTCTGTCTaGAGGTTGGCGGTATTTCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAELISV*RLAVFL
Trigger: AAGAAATACCGCCAACCTCCAGACAGAAATAAGTTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGATGTATGGTGTGTCTaGAGAAAATATGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIDVWCV*RKYVLA
Trigger: GGCAAGTACATATTTTCTCCAGACACACCATACATC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTACTTTTTCTGGCTaGAAAGGTTCTTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICTFSG*KGSSLA
Trigger: AGCAAGTGAAGAACCTTTCCAGCCAGAAAAAGTACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGCAGTCAACATATCTaGACGCAGGATTTCATTACA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASSQHI*TQDFIT
Trigger: TGTAATGAAATCCTGCGTCCAGATATGTTGACTGCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCTTTTTCATCCACATaGCAGATAGTTTTAGCAACA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAFSST*QIVLAT
Trigger: TGTTGCTAAAACTATCTGTCATGTGGATGAAAAAGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATCTTGAAGAAGTCTaGTTTGTAGATCAACTCACT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHLEEV*FVDQLT
Trigger: AGTGAGTTGATCTACAAATCAGACTTCTTCAAGATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCTCATTCATCAACTaGGTTGCATACTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFSFIN*VAYLKC
Trigger: GCATTTCAAGTATGCAACTCAGTTGATGAATGAGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATATTCTTTCTCATTaGGGATCTGAGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYILSH*GSEWHS
Trigger: AGAATGCCACTCAGATCCTCAATGAGAAAGAATATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR TCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTATATTCTTTCTCATTaGGGATCTGAGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYILSH*GSEWHS
Trigger: AGAATGCCACTCAGATCCTCAATGAGAAAGAATATA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATTCATTCTGGCTGTTaGAATTTCAAAGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIHSGC*NFKAWC
Trigger: ACACCATGCTTTGAAATTGCAACAGCCAGAATGAAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTTGTCAGCCTCCCATaGTTGTTTATAGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALVSLP*LFIEIF
Trigger: AAAAATCTCTATAAACAAGCATGGGAGGCTGACAAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTTGCATACTTGAAATaGCTGTTAATTGGACAGTCA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVAYLK*LLIGQS
Trigger: TGACTGTCCAATTAACAGGCATTTCAAGTATGCAAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTTGCATACTTGAAATaGCTGTTAATTGGACAGTCA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVAYLK*LLIGQS
Trigger: TGACTGTCCAATTAACAGGCATTTCAAGTATGCAAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTATTTGGGTGTTTTaGCCTTCTCCTTGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQACIWVF*PSPCQN
Trigger: ATTTTGACAAGGAGAAGGGCAAAACACCCAAATACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATACTCTTTCTCGCTTaGTATTTTGGTTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAILFLA*YFGCMS
Trigger: AGACATGCAACCAAAATAGCAAGCGAGAAAGAGTAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTGAATGTTGTCTTCTaGCGGATCATAGTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQALNVVF*RIIVKN
Trigger: GTTTTTGACTATGATCCGGCAGAAGACAACATTCAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTTTAACTTTCTCTTaGTCAAGGCTACCAATCGGA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFLTFS*SRLPIG
Trigger: TCCGATTGGTAGCCTTGACCAAGAGAAAGTTAAAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATAAATGCTTATTCATaGTGTGAGCATTCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAINAYS*CEHSAS
Trigger: CGAAGCAGAATGCTCACACCATGAATAAGCATTTAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTATCTGGCATAATGTaGACAGTGGTTTTATCCTTA +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVSGIM*TVVLSL
Trigger: TAAGGATAAAACCACTGTCCACATTATGCCAGATAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTATCTGGCATAATGTaGACAGTGGTTTTATCCTTA +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVSGIM*TVVLSL
Trigger: TAAGGATAAAACCACTGTCCACATTATGCCAGATAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTTCATCATGTCATTaGGAATATGCACATTTGCTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGSSCH*EYAHLL
Trigger: AAGCAAATGTGCATATTCCCAATGACATGATGAACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTTCATCATGTCATTaGGAATATGCACATTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGSSCH*EYAHLL
Trigger: AAGCAAATGTGCATATTCCCAATGACATGATGAACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAAATGCCTGTTAATTaGACAGTCAGCAACATACTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIEMPVN*TVSNIL
Trigger: AAGTATGTTGCTGACTGTCCAATTAACAGGCATTTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAAATGCCTGTTAATTaGACAGTCAGCAACATACTT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAEMPVN*TVSNIL
Trigger: AAGTATGTTGCTGACTGTCCAATTAACAGGCATTTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCCAGTATGCTTTATTaGCTTCGTACTGTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASSMLY*LRTVSC
Trigger: ACAAGAAACAGTACGAAGCCAATAAAGCATACTGGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCCAGTATGCTTTATTaGCTTCGTACTGTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISSMLY*LRTVSC
Trigger: ACAAGAAACAGTACGAAGCCAATAAAGCATACTGGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGCATGGATAATTTCTaGGGTATCAACAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASMDNF*GINNRS
Trigger: ACTTCTGTTGTTGATACCCCAGAAATTATCCATGCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCTCATAATATGACATaGACTTCTCTGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISHNMT*TSLHLP
Trigger: AGGAAGATGCAGAGAAGTCCATGTCATATTATGAGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTAATTGATGCTCCTTaGTTTGGTCTTTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVIDAP*FGLFIV
Trigger: AACTATGAAAAGACCAAAGCAAGGAGCATCAATTAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATTCATCAACTGAGTTaGATACTTGAAATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIHQLS*ILEMPV
Trigger: AACAGGCATTTCAAGTATGCAACTCAGTTGATGAAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGTATATCACTGATTTaGTTGTTGACTTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASISLI*LLTFVV
Trigger: CACCACAAAAGTCAACAAGCAAATCAGTGATATACT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR GCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGTATATCACTGATTTaGTTGTTGACTTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISISLI*LLTFVV
Trigger: CACCACAAAAGTCAACAAGCAAATCAGTGATATACT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGTAATTCATACTCTTaGCCTTTGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISNSYS*PLSSHS
Trigger: ACTATGAGAAGACAAAGGCCAAGAGTATGAATTACT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGTAATTCATACTCTTaGCCTTTGTCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQASNSYS*PLSSHS
Trigger: ACTATGAGAAGACAAAGGCCAAGAGTATGAATTACT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAAACTTGAATTTATTTaGGTGCTGACGGTAAACATG +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAKLEFI*VLTVNM
Trigger: CATGTTTACCGTCAGCACCCAAATAAATTCAAGTTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CCA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATGCACATTTGCTTTaGTGTCTTCATAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYAHLL*CLHNLF
Trigger: GAAGAGATTATGAAGACACCAAAGCAAATGTGCATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp GCTGGTCCGCAGCTTCGGAGTGCTCAGATTTCTCCTCGCCCCCACTaGTACTCAGTGCACTGGCAGATCTTGACTGGTCCCGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: AGPQLRSAQISPRPH*YSVHWQILTGPGSG
Trigger: GCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGCACTGAGTATCAGTGGGGGCGAGGAGAAATCTGAGCACTCCGAAGCTGCGGACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp CCTCCGTCACTGTATGTGGAAAGGCGCTGGTCCGCAGCTTCGGAGTaGTCAGATTTCTCCTCGCCCCCACTGATACTCAGTGCACTGGCA +
Preference number: 5 (lower is better)
Translates to: PPSLYVERRWSAASE*SDFSSPPLILSALA
Trigger: TGCCAGTGCACTGAGTATCAGTGGGGGCGAGGAGAAATCTGAGCACTCCGAAGCTGCGGACCAGCGCCTTTCCACATACAGTGACGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TCCGCTCCACCGGCTTTGCTGGTTGTGGCTGTGCCAGCGCTGGTGTaGCAGTTTCTGATTGGCCATAGTCCGATGTCCTTGTCGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SAPPALLVVAVPALV*QFLIGHSPMSLSLW
Trigger: CCACAACGACAAGGACATCGGACTATGGCCAATCAGAAACTGCCACACCAGCGCTGGCACAGCCACAACCAGCAAAGCCGGTGGAGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp CTCCTGGGCGTTTCGGGCGCGGATAACATTGGGCTCCTCGGGAAGTaGCGTCCACTGATGAAAGTAGTGTCGGTACTCCAGGTCACTGAG +
Preference number: 5 (lower is better)
Translates to: LLGVSGADNIGLLGK*RPLMKVVSVLQVTE
Trigger: CTCAGTGACCTGGAGTACCGACACTACTTTCATCAGTGGACGTCACTTCCCGAGGAGCCCAATGTTATCCGCGCCCGAAACGCCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp CAATGTCTGGGCGGCCAAGCATGCTTAACCCATGGCTGCCTTCCTTaGGATGCTTGGCTCTGTACTCCACCTCACTGGCCTGTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: QCLGGQACLTHGCLP*DAWLCTPPHWPVWL
Trigger: CAGCCAAACAGGCCAGTGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCTTGGCCGCCCAGACATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp GACGTGCTTGGTCACTGCCTTGACGTGAACTGTATCCCTGGTCTCTaGCAGGGTCGTATACGAGCCTTGGGCCAGGTGCTTCTTGACATG +
Preference number: 5 (lower is better)
Translates to: DVLGHCLDVNCIPGL*QGRIRALGQVLLDM
Trigger: CATGTCAAGAAGCACCTGGCCCAAGGCTCGTATACGACCCTGCCAGAGACCAGGGATACAGTTCACGTCAAGGCAGTGACCAAGCACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCCTGGGTGGCCTTCTaGATGTCTGGCCGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAWVAF*MSGRSA
Trigger: GGCTGACCGGCCAGACATCAAGAAGGCCACCCAGGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTGCACTGGCAGATCTaGACTGGTCCCGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVHWQI*TGPGSG
Trigger: GCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGCAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp CGGCTTTGCTGGTTGTGGCTGTGCCAGCGCTGGTGTGGCAGTTTCTaGTTGGCCATAGTCCGATGTCCTTGTCGTTGTGGTCTCATAGAC +
Preference number: 5 (lower is better)
Translates to: RLCWLWLCQRWCGSF*LAIVRCPCRCGLID
Trigger: GTCTATGAGACCACAACGACAAGGACATCGGACTATGGCCAATCAGAAACTGCCACACCAGCGCTGGCACAGCCACAACCAGCAAAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp GCTTGGCTGCCTTCTTGGCCATTTCAATGTCTGGGCGGCCAAGCATaGTTAACCCATGGCTGCCTTCCTTGCGATGCTTGGCTCTGTACT +
Preference number: 5 (lower is better)
Translates to: AWLPSWPFQCLGGQA*LTHGCLPCDAWLCT
Trigger: AGTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCTTGGCCGCCCAGACATTGAAATGGCCAAGAAGGCAGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACACCGGCTTTGCTGGTaGTGGCTGTGCCAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHRLCW*WLCQRW
Trigger: CCAGCGCTGGCACAGCCACAACCAGCAAAGCCGGTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCGCAGGTCATAGCCTaGCCTCCTGGCCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVAQVIA*PPGLLQ
Trigger: CTGGAGGAGGCCAGGAGGCAAGGCTATGACCTGCGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCCTGGGTGGCCTTCTaGATGTCTGGCCGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGAWVAF*MSGRSA
Trigger: GGCTGACCGGCCAGACATCAAGAAGGCCACCCAGGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGCCTGGGTGGCCTTCTaGATGTCTGGCCGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRAWVAF*MSGRSA
Trigger: GGCTGACCGGCCAGACATCAAGAAGGCCACCCAGGC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCCTGGGTGGCCTTCTaGATGTCTGGCCGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVAWVAF*MSGRSA
Trigger: GGCTGACCGGCCAGACATCAAGAAGGCCACCCAGGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACCTCACTGGCCTGTTaGGCTGCCTGGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTSLAC*AAWVAF
Trigger: GAAGGCCACCCAGGCAGCCAAACAGGCCAGTGAGGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp GGTGGCAAATCCACTCATGGAGGTGCAGGCGGTAGTCGATCTCGCTaGCTTTCTTCTGAGAGTCCTTGGCAGTCACCATCTCCACCATGT +
Preference number: 5 (lower is better)
Translates to: GGKSTHGGAGGSRSR*LSSESPWQSPSPPC
Trigger: ACATGGTGGAGATGGTGACTGCCAAGGACTCTCAGAAGAAAGTCAGCGAGATCGACTACCGCCTGCACCTCCATGAGTGGATTTGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp AAACTCTCGGTCCAGCTTATATTCAAAGTCACTCTGCTGGAGAGATaGCTTGGCCGCCTGGATGAAGTCTGGGCGGTCGGGCGTCCACTT +
Preference number: 5 (lower is better)
Translates to: KLSVQLIFKVTLLER*LGRLDEVWAVGRPL
Trigger: AAGTGGACGCCCGACCGCCCAGACTTCATCCAGGCGGCCAAGTCATCTCTCCAGCAGAGTGACTTTGAATATAAGCTGGACCGAGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp AGATTTCTCCTCGCCCCCACTGATACTCAGTGCACTGGCAGATCTTaGCTGGTCCCGGCTCCGGCGTTGAGCTTGGACATTAATCATGTG +
Preference number: 5 (lower is better)
Translates to: RFLLAPTDTQCTGRS*LVPAPALSLDINHV
Trigger: CACATGATTAATGTCCAAGCTCAACGCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGCACTGAGTATCAGTGGGGGCGAGGAGAAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGGGCCCACCGGATCTaGTTGTCATCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRAHRI*LSSLAV
Trigger: CACAGCCAGGGATGACAACAAGATCCGGTGGGCCCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACCTCACTGGCCTGTTaGGCTGCCTGGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTSLAC*AAWVAF
Trigger: GAAGGCCACCCAGGCAGCCAAACAGGCCAGTGAGGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACCTCACTGGCCTGTTaGGCTGCCTGGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTSLAC*AAWVAF
Trigger: GAAGGCCACCCAGGCAGCCAAACAGGCCAGTGAGGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp CCAGTGGGCAGGAAGCGCAGGCCTTTCTTGTACAAATTCTCACTCTaGAGCTTGTATGCATGGAGGGCCCGGTCCAGATCCACCGTTTTT +
Preference number: 5 (lower is better)
Translates to: PVGRKRRPFLYKFSL*SLYAWRARSRSTVF
Trigger: AAAAACGGTGGATCTGGACCGGGCCCTCCATGCATACAAGCTTCAGAGTGAGAATTTGTACAAGAAAGGCCTGCGCTTCCTGCCCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGAATTGACCTGGGCTaGCACCAGGACAGGAGAGTC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGIDLG*HQDRRV
Trigger: GACTCTCCTGTCCTGGTGCAAGCCCAGGTCAATTCC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTGTTGAGCTGGGCTaGCAACAGCACGGGAGTGTC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGVELG*QQHGSV
Trigger: GACACTCCCGTGCTGTTGCAAGCCCAGCTCAACACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTGTTGAGCTGGGCTaGCAACAGCACGGGAGTGTC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGVELG*QQHGSV
Trigger: GACACTCCCGTGCTGTTGCAAGCCCAGCTCAACACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGAAGTGCACCAGCTaGGGGTCGTCTTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMKCTS*GSSSRL
Trigger: CAGCCTGGAAGACGACCCCAAGCTGGTGCACTTCAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGTCCCGGGAAGCCTaGGCAGCCACAATGGGAATG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMSREA*AATMGM
Trigger: CATTCCCATTGTGGCTGCCAAGGCTTCCCGGGACAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCGGTCACTCTGCACTTaGGCAATGTGGAGGGACCAC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRSLCT*AMWRDH
Trigger: GTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACCG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGGGCCCACCGGATCTaGTTGTCATCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRAHRI*LSSLAV
Trigger: CACAGCCAGGGATGACAACAAGATCCGGTGGGCCCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACGGGGCTCTGGAACTaGGTCTTCCATTTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTGLWN*VFHLAH
Trigger: GTGGGCCAAATGGAAGACCAAGTTCCAGAGCCCCGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTAGTTGGGGCCACTTaGCCTCTGACACTGTGCACG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVVGAT*PLTLCT
Trigger: CGTGCACAGTGTCAGAGGCAAAGTGGCCCCAACTAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCCATGGCTGCCTTCCTaGCGATGCTTGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYPWLPS*RCLALY
Trigger: GTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATGG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACCTGGCTGCTCAGCTaGGCTGCCTTCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTWLLS*AAFLAI
Trigger: AATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp GCCCTTCCTTGGCGGCCACAACCGACACCATGTCAGCAGGGATATTaGTTTTGGCCTTTGACTTATGGTAGCTCTCCTTGTAGAGCCTGT +
Preference number: 5 (lower is better)
Translates to: ALPWRPQPTPCQQGY*FWPLTYGSSPCRAC
Trigger: ACAGGCTCTACAAGGAGAGCTACCATAAGTCAAAGGCCAAAATCAATATCCCTGCTGACATGGTGTCGGTTGTGGCCGCCAAGGAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp TATATTCAAAGTCACTCTGCTGGAGAGATGACTTGGCCGCCTGGATaGAGTCTGGGCGGTCGGGCGTCCACTTCCAGTATGCTTTATTGG +
Preference number: 5 (lower is better)
Translates to: YIQSHSAGEMTWPPG*SLGGRASTSSMLYW
Trigger: CCAATAAAGCATACTGGAAGTGGACGCCCGACCGCCCAGACTTCATCCAGGCGGCCAAGTCATCTCTCCAGCAGAGTGACTTTGAATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp GGCCGCCTGGATGAAGTCTGGGCGGTCGGGCGTCCACTTCCAGTATaGTTTATTGGCTTCGTACTGTTTCTTGTAGTCCAGATTTGTGTT +
Preference number: 5 (lower is better)
Translates to: GRLDEVWAVGRPLPV*FIGFVLFLVVQICV
Trigger: AACACAAATCTGGACTACAAGAAACAGTACGAAGCCAATAAAGCATACTGGAAGTGGACGCCCGACCGCCCAGACTTCATCCAGGCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp AACCATGCCCATGGAGTCTGGCACACTTGTGAACTTGATGGTGTCTaGGTGTTGTCGGTACTTCCTCTCATTCAGTGCCTCGCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: NHAHGVWHTCELDGV*VLSVLPLIQCLACF
Trigger: AAAGCAGGCGAGGCACTGAATGAGAGGAAGTACCGACAACACCCAGACACCATCAAGTTCACAAGTGTGCCAGACTCCATGGGCATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp AACATCGCTGGAATGATGGGCATGAACGAATGGCACAGCATCGGGTaGCAGAATGTAGCCTGTGGCTTTCTGTTTCTCCCAGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: NIAGMMGMNEWHSIG*QNVACGFLFLPAFL
Trigger: AAGGAAGGCTGGGAGAAACAGAAAGCCACAGGCTACATTCTGCCACCCGATGCTGTGCCATTCGTTCATGCCCATCATTCCAGCGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp AGCTTATATTCAAAGTCACTCTGCTGGAGAGATGACTTGGCCGCCTaGATGAAGTCTGGGCGGTCGGGCGTCCACTTCCAGTATGCTTTA +
Preference number: 5 (lower is better)
Translates to: SLYSKSLCWRDDLAA*MKSGRSGVHFQYAL
Trigger: TAAAGCATACTGGAAGTGGACGCCCGACCGCCCAGACTTCATCCAGGCGGCCAAGTCATCTCTCCAGCAGAGTGACTTTGAATATAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp GTTCTCAGACACCAGATTGCTGACAGTCTTCGCCAAGAGGATCTGTaGGGTGTCAGGCACAGCATGACAGCTTCCTCTTTCCTTTACGTG +
Preference number: 5 (lower is better)
Translates to: VLRHQIADSLRQEDL*GVRHSMTASSFLYV
Trigger: CACGTAAAGGAAAGAGGAAGCTGTCATGCTGTGCCTGACACCCCACAGATCCTCTTGGCGAAGACTGTCAGCAATCTGGTGTCTGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp AATCTGGCTGGCAATGTCGGTAGCATTCCTGGCCCGCATAAAATCTaGAGTCTCGTTGGCCATGGCATTCAGGCCTCTTCCTTTGACTTC +
Preference number: 5 (lower is better)
Translates to: NLAGNVGSIPGPHKI*SLVGHGIQASSFDF
Trigger: GAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAACGAGACTCCAGATTTTATGCGGGCCAGGAATGCTACCGACATTGCCAGCCAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGAATTGACCTGGGCTaGCACCAGGACAGGAGAGTC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGIDLG*HQDRRV
Trigger: GACTCTCCTGTCCTGGTGCAAGCCCAGGTCAATTCC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGAATTGACCTGGGCTaGCACCAGGACAGGAGAGTC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGIDLG*HQDRRV
Trigger: GACTCTCCTGTCCTGGTGCAAGCCCAGGTCAATTCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTTCCGAGGCGCGCTTaGCCTTTTCCATCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFPRRA*PFPSPG
Trigger: CCCTGGAGATGGAAAAGGCAAAGCGCGCCTCGGAAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGAAGTGCACCAGCTaGGGGTCGTCTTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMKCTS*GSSSRL
Trigger: CAGCCTGGAAGACGACCCCAAGCTGGTGCACTTCAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATATCTCTGGAGGCCTaGGCCGCCACAATGGGGATA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYISLEA*AATMGI
Trigger: TATCCCCATTGTGGCGGCCAAGGCCTCCAGAGATAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGTCCCGGGAAGCCTaGGCAGCCACAATGGGAATG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMSREA*AATMGM
Trigger: CATTCCCATTGTGGCTGCCAAGGCTTCCCGGGACAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGGTCACTCTGCACTTaGGCAATGTGGAGGGACCAC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRSLCT*AMWRDH
Trigger: GTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACCG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGGTCACTCTGCACTTaGGCAATGTGGAGGGACCAC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRSLCT*AMWRDH
Trigger: GTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACCG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACGGGGCTCTGGAACTaGGTCTTCCATTTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTGLWN*VFHLAH
Trigger: GTGGGCCAAATGGAAGACCAAGTTCCAGAGCCCCGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACGGGGCTCTGGAACTaGGTCTTCCATTTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTGLWN*VFHLAH
Trigger: GTGGGCCAAATGGAAGACCAAGTTCCAGAGCCCCGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGGTCGATGTTAAGTTaGCCCACTCGGAGACACCGC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRSMLS*PTRRHR
Trigger: GCGGTGTCTCCGAGTGGGCAAACTTAACATCGACCG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGGTCGATGTTAAGTTaGCCCACTCGGAGACACCGC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRSMLS*PTRRHR
Trigger: GCGGTGTCTCCGAGTGGGCAAACTTAACATCGACCG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTAGTTGGGGCCACTTaGCCTCTGACACTGTGCACG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVVGAT*PLTLCT
Trigger: CGTGCACAGTGTCAGAGGCAAAGTGGCCCCAACTAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCTGGAGAGATGACTaGGCCGCCTGGATGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCWRDD*AAWMKS
Trigger: AGACTTCATCCAGGCGGCCAAGTCATCTCTCCAGCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCATGGCTGCCTTCCTaGCGATGCTTGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPWLPS*RCLALY
Trigger: GTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCATGGCTGCCTTCCTaGCGATGCTTGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPWLPS*RCLALY
Trigger: GTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACCTGGCTGCTCAGCTaGGCTGCCTTCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTWLLS*AAFLAI
Trigger: AATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACCTGGCTGCTCAGCTaGGCTGCCTTCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTWLLS*AAFLAI
Trigger: AATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGCTTCTGGGTCTCCTaGACGCGTTTCACTTCGGGC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCFWVS*TRFTSG
Trigger: GCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTAAGGGGGTCCCCTaGCTCAGGTTCTCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGKGVP*LRFSLY
Trigger: GTACAAAGAGAACCTGAGCAAGGGGACCCCCTTACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp CGTAGTCATAGTGGTAGACAGCATCACTCAGCTGCTTCCCACTCTTaGCTGCCTGAACGTAAACCGGTGTGTCAGTCACCAGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: RSHSGRQHHSAASHS*LPERKPVCQSPACS
Trigger: ACTACAAGCTGGTGACTGACACACCGGTTTACGTTCAGGCAGTCAAGAGTGGGAAGCAGCTGAGTGATGCTGTCTACCACTATGACTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp TCTCCTTTAGCTTTGTATAAGATATCACTGGCTTGCTGCGTGTTCTaGTTTGCCTGCACCATCACCGGGGAGTCCACGATGCTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: SPLALYKISLACCVF*FACTITGESTMLVN
Trigger: GTTCACCAGCATCGTGGACTCCCCGGTGATGGTGCAGGCAAAGCAGAACACGCAGCAAGCCAGTGATATCTTATACAAAGCTAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp CTTATGGTAGCTCTCCTTGTAGAGCCTGTCGTTCTGAATCTGGCCTaGGTGCTCAAACCAAACCAGCTTGGGATCGTCTCTCATTGTAGG +
Preference number: 5 (lower is better)
Translates to: LMVALLVEPVVLNLA*VLKPNQLGIVSHCR
Trigger: CCTACAATGAGAGACGATCCCAAGCTGGTTTGGTTTGAGCACGCAGGCCAGATTCAGAACGACAGGCTCTACAAGGAGAGCTACCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGATCACTGAGCTGTTaGGTGTTGAGCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRSLSC*VLSWAC
Trigger: GCAAGCCCAGCTCAACACCAAACAGCTCAGTGATCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTGGCACGCTGCACTaGAATTTCTCACCTTCATGC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAGTLH*NFSPSC
Trigger: GCATGAAGGTGAGAAATTCAAGTGCAGCGTGCCAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTAGCTTGGGTGACTaGGATCATGTCAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLSLGD*DHVKRG
Trigger: GCCCCTCTTGACATGATCCAAGTCACCCAAGCTAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACTTCCTGGGACTTCTaGGCTGCCACCACACTGAAC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTSWDF*AATTLN
Trigger: GTTCAGTGTGGTGGCAGCCAAGAAGTCCCAGGAAGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACTTCCTGGGACTTCTaGGCTGCCACCACACTGAAC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTSWDF*AATTLN
Trigger: GTTCAGTGTGGTGGCAGCCAAGAAGTCCCAGGAAGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTTGGTGATGTTGGCTaGCGCATCCTTGGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVGDVG*RILGCC
Trigger: ACAGCAGCCAAGGATGCGCAAGCCAACATCACCAAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTTGGTGATGTTGGCTaGCGCATCCTTGGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVGDVG*RILGCC
Trigger: ACAGCAGCCAAGGATGCGCAAGCCAACATCACCAAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATATCTCTGGAGGCCTaGGCCGCCACAATGGGGATA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGISLEA*AATMGI
Trigger: TATCCCCATTGTGGCGGCCAAGGCCTCCAGAGATAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATATCTCTGGAGGCCTaGGCCGCCACAATGGGGATA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVISLEA*AATMGI
Trigger: TATCCCCATTGTGGCGGCCAAGGCCTCCAGAGATAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTGGCAGAATTGCTCTaGGCCAGCAGGATTTCAGGG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLAELL*ASRISG
Trigger: CCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTGCTGTACAGACTCTaGAGGTGCTTGGTTCTGTCG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLLYRL*RCLVLS
Trigger: CGACAGAACCAAGCACCTCAAGAGTCTGTACAGCAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGGTGCTTCTGGTTCTaGGCATGTGTCAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRCFWF*ACVRDK
Trigger: CTTGTCCCTGACACATGCCAAGAACCAGAAGCACCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGACACCGCGCTGTGTTaGGATCGTCGTCAACACTTT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDTALC*DRRQHF
Trigger: AAAGTGTTGACGACGATCCAAACACAGCGCGGTGTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGCTGGAGAGATGACTaGGCCGCCTGGATGAAGTCT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCWRDD*AAWMKS
Trigger: AGACTTCATCCAGGCGGCCAAGTCATCTCTCCAGCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGCTGGAGAGATGACTaGGCCGCCTGGATGAAGTCT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCWRDD*AAWMKS
Trigger: AGACTTCATCCAGGCGGCCAAGTCATCTCTCCAGCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGAAAGCTTGCAGCCCTaGAGAAACTCTCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVESLQP*RNSRSS
Trigger: GCTGGACCGAGAGTTTCTCAAGGGCTGCAAGCTTTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAAAGCTTGCAGCCCTaGAGAAACTCTCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGESLQP*RNSRSS
Trigger: GCTGGACCGAGAGTTTCTCAAGGGCTGCAAGCTTTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGGCCAGGTGCTTCTaGACATGGTCCTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWARCF*TWSLYL
Trigger: CAAGTACAAGGACCATGTCAAGAAGCACCTGGCCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCACCTCTGGAGGCTCTaGCATGATGGAGTAGTTGGA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHLWRL*HDGVVG
Trigger: TCCAACTACTCCATCATGCAAGAGCCTCCAGAGGTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCTTCCTTGCGATGCTaGGCTCTGTACTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPSLRC*ALYSTS
Trigger: TGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGCTTGGCTGCCTTCTaGGCCATTTCAATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLAAF*AISMSG
Trigger: CCCAGACATTGAAATGGCCAAGAAGGCAGCCAAGCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCCAGGTTGTCAGGTATaGTGTGGTAGTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYPGCQV*CGSGLC
Trigger: GCAAAGGCCACTACCACACAATACCTGACAACCTGG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTCCCGGCTCCGGCGTaGAGCTTGGACATTAATCAT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVPAPA*SLDINH
Trigger: ATGATTAATGTCCAAGCTCAACGCCGGAGCCGGGAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTCCCGGCTCCGGCGTaGAGCTTGGACATTAATCAT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVPAPA*SLDINH
Trigger: ATGATTAATGTCCAAGCTCAACGCCGGAGCCGGGAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAATGGCTCACTGATTaGCAGAGCGTTGGTCTTCGC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQWLTD*QSVGLR
Trigger: GCGAAGACCAACGCTCTGCAAATCAGTGAGCCATTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTAAGGGGGTCCCCTaGCTCAGGTTCTCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGKGVP*LRFSLY
Trigger: GTACAAAGAGAACCTGAGCAAGGGGACCCCCTTACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp TCTCAGCTTCCAGGGAGCCGAGGGGGAGCCATCCAATGCCCTTCATaGAGTCGGCATAGTCTGCCTTATACTGATTATCACTTTGAATCT +
Preference number: 5 (lower is better)
Translates to: SQLPGSRGGAIQCPS*SRHSLPYTDYHFES
Trigger: AGATTCAAAGTGATAATCAGTATAAGGCAGACTATGCCGACTTCATGAAGGGCATTGGATGGCTCCCCCTCGGCTCCCTGGAAGCTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp GAGAGTCCTTGGCAGTCACCATCTCCACCATGTCGGGCACGATGTTaGTTTTCATCTTGTTCTTCTCGTACACTGATCTGTACAGGCGGT +
Preference number: 5 (lower is better)
Translates to: ESPWQSPSPPCRARC*FSSCSSRTLICTGG
Trigger: ACCGCCTGTACAGATCAGTGTACGAGAAGAACAAGATGAAAATCAACATCGTGCCCGACATGGTGGAGATGGTGACTGCCAAGGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp GTGGTGGAGAGAGTGCTTGTAGTTGGTATTGCTGATCACATCCTGTaGCTTCTTAGCCGCCACAACGTCGAACATGTCGTGAGGTGTATT +
Preference number: 5 (lower is better)
Translates to: VVERVLVVGIADHIL*LLSRHNVEHVVRCI
Trigger: AATACACCTCACGACATGTTCGACGTTGTGGCGGCTAAGAAGGCACAGGATGTGATCAGCAATACCAACTACAAGCACTCTCTCCACCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp GTCATAGTGGTAGACAGCATCACTCAGCTGCTTCCCACTCTTGACTaGCTGAACGTAAACCGGTGTGTCAGTCACCAGCTTGTAGTCATT +
Preference number: 5 (lower is better)
Translates to: VIVVDSITQLLPTLD*LNVNRCVSHQLVVI
Trigger: AATGACTACAAGCTGGTGACTGACACACCGGTTTACGTTCAGGCAGTCAAGAGTGGGAAGCAGCTGAGTGATGCTGTCTACCACTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TCCATGGTGTCCATGGAATATGTGAACTTCAGCTTCTCGGGGTGCTaGCGATACTTTCTCTCACTCAGAATCTCCCCAGCTTTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: SMVSMEYVNFSFSGC*RYFLSLRISPAFFA
Trigger: GGCAAAGAAAGCTGGGGAGATTCTGAGTGAGAGAAAGTATCGCCAGCACCCCGAGAAGCTGAAGTTCACATATTCCATGGACACCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp CATCCTTCACTTTGCGGACATGCAGCAGCATGGGTGTGTCATGGATaGTGGTGTAGCCTCTTGGTCTGGCCTTGTTGTATTCCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: HPSLCGHAAAWVCHG*WCSLLVWPCCIPVY
Trigger: ATAAACTGGAATACAACAAGGCCAGACCAAGAGGCTACACCACCATCCATGACACACCCATGCTGCTGCATGTCCGCAAAGTGAAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp AACATCACTCTGCTTCTTAGCCACTTCCATGGCGTGCTTCACCTCTaGAGGCTCTTGCATGATGGAGTAGTTGGACTTGCCTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: NITLLLSHFHGVLHL*RLLHDGVVGLAFLL
Trigger: AAGGAGAAAGGCAAGTCCAACTACTCCATCATGCAAGAGCCTCCAGAGGTGAAGCACGCCATGGAAGTGGCTAAGAAGCAGAGTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTGTTCTTGACGGCTaGGACAAGTTCAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCVLDG*DKFRGI
Trigger: GATGCCCCTGAACTTGTCCAAGCCGTCAAGAACACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGTGTTCTTGACGGCTaGGACAAGTTCAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCVLDG*DKFRGI
Trigger: GATGCCCCTGAACTTGTCCAAGCCGTCAAGAACACA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGAAGGGTGTCAAGTaGATACTTGGGGGTCTCACA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQKGVK*ILGGLT
Trigger: TGTGAGACCCCCAAGTATCAACTTGACACCCTTCTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGATCACTGAGCTGTTaGGTGTTGAGCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRSLSC*VLSWAC
Trigger: GCAAGCCCAGCTCAACACCAAACAGCTCAGTGATCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCTGGCACGCTGCACTaGAATTTCTCACCTTCATGC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGAGTLH*NFSPSC
Trigger: GCATGAAGGTGAGAAATTCAAGTGCAGCGTGCCAGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTTAGCTTGGGTGACTaGGATCATGTCAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLSLGD*DHVKRG
Trigger: GCCCCTCTTGACATGATCCAAGTCACCCAAGCTAAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTTAGCTTGGGTGACTaGGATCATGTCAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLSLGD*DHVKRG
Trigger: GCCCCTCTTGACATGATCCAAGTCACCCAAGCTAAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATCCACCCAATGCCCTaGAAGAAGCTGTTGTACTCG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIHPMP*KKLLYS
Trigger: CGAGTACAACAGCTTCTTCAAGGGCATTGGGTGGAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTGGTGTTGGTGATGTaGGCTTGCGCATCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLVLVM*ACASLA
Trigger: AGCCAAGGATGCGCAAGCCAACATCACCAACACCAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTGGTGTTGGTGATGTaGGCTTGCGCATCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLVLVM*ACASLA
Trigger: AGCCAAGGATGCGCAAGCCAACATCACCAACACCAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGCTGGCATATTCCGTaGCTTTCTTGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRWHIP*LSWPSP
Trigger: TGGAGAAGGCCAAGAAAGCAACGGAATATGCCAGCG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGCTGGCATATTCCGTaGCTTTCTTGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRWHIP*LSWPSP
Trigger: TGGAGAAGGCCAAGAAAGCAACGGAATATGCCAGCG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGCTGGCATATTCCGTaGCTTTCTTGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRWHIP*LSWPSP
Trigger: TGGAGAAGGCCAAGAAAGCAACGGAATATGCCAGCG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGTCCCTTGATGTCTaGGCCAGCTGGACAGAAATC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMSLDV*ASWTEI
Trigger: GATTTCTGTCCAGCTGGCCAAGACATCAAGGGACAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATCTCTGTGGCCCTCTaGGCTTTGACAACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYISVAL*ALTTSK
Trigger: CTTGGAAGTTGTCAAAGCCAAGAGGGCCACAGAGAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTGGCAGAATTGCTCTaGGCCAGCAGGATTTCAGGG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLAELL*ASRISG
Trigger: CCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTGGCAGAATTGCTCTaGGCCAGCAGGATTTCAGGG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLAELL*ASRISG
Trigger: CCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGGTGCTTCTGGTTCTaGGCATGTGTCAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRCFWF*ACVRDK
Trigger: CTTGTCCCTGACACATGCCAAGAACCAGAAGCACCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGGTGCTTCTGGTTCTaGGCATGTGTCAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRCFWF*ACVRDK
Trigger: CTTGTCCCTGACACATGCCAAGAACCAGAAGCACCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGACACCGCGCTGTGTTaGGATCGTCGTCAACACTTT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDTALC*DRRQHF
Trigger: AAAGTGTTGACGACGATCCAAACACAGCGCGGTGTC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGACACCGCGCTGTGTTaGGATCGTCGTCAACACTTT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDTALC*DRRQHF
Trigger: AAAGTGTTGACGACGATCCAAACACAGCGCGGTGTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGGACTTCTGCTTCTaGCCTGAGGCTCTGTACACC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMDFCF*PEALYT
Trigger: GGTGTACAGAGCCTCAGGCAAGAAGCAGAAGTCCAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGGACTTCTGCTTCTaGCCTGAGGCTCTGTACACC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMDFCF*PEALYT
Trigger: GGTGTACAGAGCCTCAGGCAAGAAGCAGAAGTCCAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGGACTTCTGCTTCTaGCCTGAGGCTCTGTACACC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMDFCF*PEALYT
Trigger: GGTGTACAGAGCCTCAGGCAAGAAGCAGAAGTCCAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACTTCATCCTTCACTTaGCGGACATGCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTSSFT*RTCSSM
Trigger: CATGCTGCTGCATGTCCGCAAAGTGAAGGATGAAGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGGCCAGGTGCTTCTaGACATGGTCCTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWARCF*TWSLYL
Trigger: CAAGTACAAGGACCATGTCAAGAAGCACCTGGCCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGGCCAGGTGCTTCTaGACATGGTCCTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWARCF*TWSLYL
Trigger: CAAGTACAAGGACCATGTCAAGAAGCACCTGGCCCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACACCTCTGGAGGCTCTaGCATGATGGAGTAGTTGGA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHLWRL*HDGVVG
Trigger: TCCAACTACTCCATCATGCAAGAGCCTCCAGAGGTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGCTTGGCTGCCTTCTaGGCCATTTCAATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSLAAF*AISMSG
Trigger: CCCAGACATTGAAATGGCCAAGAAGGCAGCCAAGCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGCTTGGCTGCCTTCTaGGCCATTTCAATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSLAAF*AISMSG
Trigger: CCCAGACATTGAAATGGCCAAGAAGGCAGCCAAGCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCAGGTTGTCAGGTATaGTGTGGTAGTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPGCQV*CGSGLC
Trigger: GCAAAGGCCACTACCACACAATACCTGACAACCTGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAAATCTGGAGTCTCGTaGGCCATGGCATTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRKSGVS*AMAFRP
Trigger: AGGCCTGAATGCCATGGCCAACGAGACTCCAGATTT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAAATCTGGAGTCTCGTaGGCCATGGCATTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGKSGVS*AMAFRP
Trigger: AGGCCTGAATGCCATGGCCAACGAGACTCCAGATTT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTGCAGACTTCGGGATaGAATGTTGTCTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVQTSG*NVVFCR
Trigger: CCGGCAGAAGACAACATTCAATCCCGAAGTCTGCAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTGCAGACTTCGGGATaGAATGTTGTCTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVQTSG*NVVFCR
Trigger: CCGGCAGAAGACAACATTCAATCCCGAAGTCTGCAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp TATAGTGAATATCACTTGCAGCCTGTCGGGCAGCTTTGGCGGCTTTaGTGGGGATGGCATCAATTCTCAGGTCATAGCCCTTCTTGCTTA +
Preference number: 5 (lower is better)
Translates to: YSEYHLQPVGQLWRL*WGWHQFSGHSPSCL
Trigger: TAAGCAAGAAGGGCTATGACCTGAGAATTGATGCCATCCCCATCAAAGCCGCCAAAGCTGCCCGACAGGCTGCAAGTGATATTCACTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp GCGCAGGTGCTCTGGGGTGTCCACAACCGAGGTGAATTTGTCCTTTaGCTTCTCATACTTTTTCCTGTATTTGATCTGGCTGATCTGGTC +
Preference number: 5 (lower is better)
Translates to: AQVLWGVHNRGEFVL*LLILFPVFDLADLV
Trigger: GACCAGATCAGCCAGATCAAATACAGGAAAAAGTATGAGAAGTCAAAGGACAAATTCACCTCGGTTGTGGACACCCCAGAGCACCTGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS TCA 90 bp TGGCATTCTTGGCTCTCAGCATGTCAGGAGTATCTTCCATCTCAGTaGGACCTCTGCCTCGGATGCTTTCTTCCAGGTCTTTCCTATACT +
Preference number: 5 (lower is better)
Translates to: WHSWLSACQEYLPSQ*DLCLGCFLPGLSYT
Trigger: AGTATAGGAAAGACCTGGAAGAAAGCATCCGAGGCAGAGGTCTCACTGAGATGGAAGATACTCCTGACATGCTGAGAGCCAAGAATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp CCGTTGCTGTGGGAGCTGAGTGGTTTTCACATGTTTGTAAGCTGTTaGAGTTGCAGAGAAGAAGGCACCTCCGTCACTGTATGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: PLLWELSGFHMFVSC*SCREEGTSVTVCGK
Trigger: CTTTCCACATACAGTGACGGAGGTGCCTTCTTCTCTGCAACTTCAACAGCTTACAAACATGTGAAAACCACTCAGCTCCCACAGCAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp TCCTATACTCTTTCCCACTCTGCATCTGCTGAGACTCTTTGGCAGTaGTGTATGTTGGAGTCTCAAAGTCCAGCATGGGCTTGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: SYTLSHSASAETLWQ*CMLESQSPAWACLV
Trigger: AACGAGGCAAGCCCATGCTGGACTTTGAGACTCCAACATACATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGGGAAAGAGTATAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135200.2
CDS TCA 90 bp GCGCAGGTGCTCTGGGGTGTCCACAACCGAGGTGAATTTGTCCTTTaGCTTCTCATACTTTTTCCTGTATTTGATCTGGCTCCACATGTG +
Preference number: 5 (lower is better)
Translates to: AQVLWGVHNRGEFVL*LLILFPVFDLAPHV
Trigger: CACATGTGGAGCCAGATCAAATACAGGAAAAAGTATGAGAAGTCAAAGGACAAATTCACCTCGGTTGTGGACACCCCAGAGCACCTGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148356.3
ENSMUST00000238749.2
CDS GCA 90 bp CATGCCAGTCCCGCTTGTAGCAGACGTCACTTATGTTGTAAGCATTaGACTTGGCCTGGAGAAACTGTGGGAGATCAGGATTCAGAGTAT +
Preference number: 5 (lower is better)
Translates to: HASPACSRRHLCCKH*TWPGETVGDQDSEY
Trigger: ATACTCTGAATCCTGATCTCCCACAGTTTCTCCAGGCCAAGTGCAATGCTTACAACATAAGTGACGTCTGCTACAAGCGGGACTGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp CCTGAGGCTCTGTACACCAGCTCACTCAGATGCGTCTTCAGTTCCTaGACTTTTCTGTATTCTGGGGTGTCAAGCACCACTTTGTATTTG +
Preference number: 5 (lower is better)
Translates to: PEALYTSSLRCVFSS*TFLYSGVSSTTLYL
Trigger: CAAATACAAAGTGGTGCTTGACACCCCAGAATACAGAAAAGTGCAGGAACTGAAGACGCATCTGAGTGAGCTGGTGTACAGAGCCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TCAGTGTACAGTTTCTTACTGAACATGGCTGTGTTCTTGACGGCTTaGACAAGTTCAGGGGCATCAGGGGGAAGCAGGTACTTATCCTTG +
Preference number: 5 (lower is better)
Translates to: SVYSFLLNMAVFLTA*TSSGASGGSRYLSL
Trigger: CAAGGATAAGTACCTGCTTCCCCCTGATGCCCCTGAACTTGTCCAAGCCGTCAAGAACACAGCCATGTTCAGTAAGAAACTGTACACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp GCTTGGGGTCGTCTTCCAGGCTGCGGAAGCCAATGTGCTTCCCTTTaGATTGTTCATAGGCTTGCTTGTACTTGTAATCACTGGCAATAT +
Preference number: 5 (lower is better)
Translates to: AWGRLPGCGSQCASL*IVHRLACTCNHWQY
Trigger: ATATTGCCAGTGATTACAAGTACAAGCAAGCCTATGAACAATCCAAAGGGAAGCACATTGGCTTCCGCAGCCTGGAAGACGACCCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TCCATGGCGTCAGGGATGCTGGTGAACTTATTTCTGTCTGGAGGTTaGCGGTATTTCTTCTCACTGATGATTTCTGAAGCCCGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SMASGMLVNLFLSGG*RYFFSLMISEARLF
Trigger: GAACAAGCGGGCTTCAGAAATCATCAGTGAGAAGAAATACCGCCAACCTCCAGACAGAAATAAGTTCACCAGCATCCCTGACGCCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TCTCGATATAGTCTCTCACTAGTAACGTTGTTGACTCTCCGGACATaGACAAACGGGACATCCTTGGGTCCAAGTGTGTACCCATTTGCC +
Preference number: 5 (lower is better)
Translates to: SRYSLSLVTLLTLRT*TNGTSLGPSVYPFA
Trigger: GGCAAATGGGTACACACTTGGACCCAAGGATGTCCCGTTTGTCCATGTCCGGAGAGTCAACAACGTTACTAGTGAGAGACTATATCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACCGATGTCCTTGTCGTaGTGGTCTCATAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGPMSLS*WSHRLL
Trigger: CAGAAGTCTATGAGACCACAACGACAAGGACATCGG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCGATGTCCTTGTCGTaGTGGTCTCATAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPMSLS*WSHRLL
Trigger: CAGAAGTCTATGAGACCACAACGACAAGGACATCGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTTTGTATTTTACCTaGCTAGCAGCGACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCLYFT*LAATPA
Trigger: GGCTGGAGTCGCTGCTAGCAAGGTAAAATACAAACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAGAAGGGTGTCAAGTaGATACTTGGGGGTCTCACA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQKGVK*ILGGLT
Trigger: TGTGAGACCCCCAAGTATCAACTTGACACCCTTCTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACAGAAGGGTGTCAAGTaGATACTTGGGGGTCTCACA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGQKGVK*ILGGLT
Trigger: TGTGAGACCCCCAAGTATCAACTTGACACCCTTCTG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGGATGGCATCCACCTaGATGTCGAACTTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGMAST*MSNFLA
Trigger: AGCTAAGAAGTTCGACATCAAGGTGGATGCCATCCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGTTTAGGATCGTCTaGGAGACTTTGGAATCCGAC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQFRIV*ETLESD
Trigger: GTCGGATTCCAAAGTCTCCAAGACGATCCTAAACTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAACGTGCTTTCCCTTaGCCTTCTCATAAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQRAFP*PSHKPL
Trigger: AAGAGGCTTATGAGAAGGCAAAGGGAAAGCACGTTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATCCACCCAATGCCCTaGAAGAAGCTGTTGTACTCG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIHPMP*KKLLYS
Trigger: CGAGTACAACAGCTTCTTCAAGGGCATTGGGTGGAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATCCACCCAATGCCCTaGAAGAAGCTGTTGTACTCG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIHPMP*KKLLYS
Trigger: CGAGTACAACAGCTTCTTCAAGGGCATTGGGTGGAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGATGGTGTCTGGGTGTaGTCGGTACTTCCTCTCATT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRDGVWV*SVLPLI
Trigger: AATGAGAGGAAGTACCGACAACACCCAGACACCATC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGATGGTGTCTGGGTGTaGTCGGTACTTCCTCTCATT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDGVWV*SVLPLI
Trigger: AATGAGAGGAAGTACCGACAACACCCAGACACCATC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATGGTGTCTGGGTGTaGTCGGTACTTCCTCTCATT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDGVWV*SVLPLI
Trigger: AATGAGAGGAAGTACCGACAACACCCAGACACCATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACTGAGAAAGCCAATTaGCTTGCCTCTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTEKAN*LASGFL
Trigger: GAGAAAGCCAGAGGCAAGCAAATTGGCTTTCTCAGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGTCCCTTGATGTCTaGGCCAGCTGGACAGAAATC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMSLDV*ASWTEI
Trigger: GATTTCTGTCCAGCTGGCCAAGACATCAAGGGACAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCATTCCAGGTCTGCCTaGTACAGATTATCACTCTGG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHSRSA*YRLSLW
Trigger: CCAGAGTGATAATCTGTACAAGGCAGACCTGGAATG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATCTCTGTGGCCCTCTaGGCTTTGACAACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRISVAL*ALTTSK
Trigger: CTTGGAAGTTGTCAAAGCCAAGAGGGCCACAGAGAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACATGGATCGTTTTCTaGTCATTGTCCCAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTWIVF*SLSQAS
Trigger: GGAAGCCTGGGACAATGACAAGAAAACGATCCATGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACATGGATGGAGGCTTaGTCAGCATCCCAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTWMEA*SASQAS
Trigger: AGAAGCTTGGGATGCTGACAAAGCCTCCATCCATGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACATGGATGGAGGCTTaGTCAGCATCCCAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTWMEA*SASQAS
Trigger: AGAAGCTTGGGATGCTGACAAAGCCTCCATCCATGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGAGGCCTTGGCACTTTaGATGGAAATAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYEALAL*MEIASS
Trigger: AGAGGATGCTATTTCCATCAAAAGTGCCAAGGCCTC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACATCACAGCTCATCTaGACTTCATCCCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTSQLI*TSSHPS
Trigger: TGAGGGGTGGGATGAAGTCAAGATGAGCTGTGATGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACATCACAGCTCATCTaGACTTCATCCCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTSQLI*TSSHPS
Trigger: TGAGGGGTGGGATGAAGTCAAGATGAGCTGTGATGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTGAATAACATCATTTaGGTCAGGGTGGCACGTCCA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLNNII*VRVARP
Trigger: TGGACGTGCCACCCTGACCAAAATGATGTTATTCAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTTGGCTCCAACAATaGGAATATAGCGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYAWLQQ*EYSAHP
Trigger: TGGATGAGCGCTATATTCCAATTGTTGGAGCCAAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGGTGAGGTCATCCTaGTATACAATGTCGCTGATC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQVRSS*YTMSLI
Trigger: GATCAGCGACATTGTATACAAGGATGACCTCACCTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCACTAGTAACGTTGTaGACTCTCCGGACATGGACA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSLVTL*TLRTWT
Trigger: TGTCCATGTCCGGAGAGTCAACAACGTTACTAGTGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTCTCACTAGTAACGTaGTTGACTCTCCGGACATGG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLSLVT*LTLRTW
Trigger: CCATGTCCGGAGAGTCAACAACGTTACTAGTGAGAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTCTCACTAGTAACGTaGTTGACTCTCCGGACATGG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLSLVT*LTLRTW
Trigger: CCATGTCCGGAGAGTCAACAACGTTACTAGTGAGAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTGTGTCTTCTTGACTaGGCGGATTTCAGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLCLLD*ADFRCV
Trigger: GACACACCTGAAATCCGCCAAGTCAAGAAGACACAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCTTCTTGTGTCTTCTaGACTTGGCGGATTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYASCVF*TWRISG
Trigger: ACCTGAAATCCGCCAAGTCAAGAAGACACAAGAAGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTCACTGACAGCTTCTaGTGTCTTCTTGACTTGGCG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLTDSF*CLLDLA
Trigger: CGCCAAGTCAAGAAGACACAAGAAGCTGTCAGTGAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCACGTCTTTAGCGTGTaGCAAAGCTGTGGTCTGATT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHVFSV*QSCGLI
Trigger: AATCAGACCACAGCTTTGCAACACGCTAAAGACGTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACTTCATCCTTCACTTaGCGGACATGCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTSSFT*RTCSSM
Trigger: CATGCTGCTGCATGTCCGCAAAGTGAAGGATGAAGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACTTCATCCTTCACTTaGCGGACATGCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTSSFT*RTCSSM
Trigger: CATGCTGCTGCATGTCCGCAAAGTGAAGGATGAAGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCAGTGACAGAAAGCTaGCAGCCCTTGAGAAACTCT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSVTES*QPLRNS
Trigger: AGAGTTTCTCAAGGGCTGCAAGCTTTCTGTCACTGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGCTGTCTTTCGGGTaGTATTTGGGTGTTTTGCCC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWLSFG*YLGVLP
Trigger: GGGCAAAACACCCAAATACAACCCGAAAGACAGCCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAATGTGGTCCTGCGTTaGCTTCACTCTGAGCATCTC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGNVVLR*LHSEHL
Trigger: GAGATGCTCAGAGTGAAGCAAACGCAGGACCACATT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGTAAGCTGTTGAAGTaGCAGAGAAGAAGGCACCTC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCKLLK*QRRRHL
Trigger: GAGGTGCCTTCTTCTCTGCAACTTCAACAGCTTACA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGATGGCATTCAGTTaGGACTGCAACATCACAGGT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWMAFS*DCNITG
Trigger: ACCTGTGATGTTGCAGTCCAAACTGAATGCCATCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp TCCTATATTCTTTCCCACTCTGCATCTGCTGAGACTCTTTGGCAGTaGTGTATGTTGGAGTCTCAAAGTCCAGCATGGGCTTGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: SYILSHSASAETLWQ*CMLESQSPAWACLV
Trigger: AACGAGGCAAGCCCATGCTGGACTTTGAGACTCCAACATACATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGGGAAAGAATATAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp GTCACTCTGAATGTGATTCATGTTCCTGGTCAGCTCGATGTTCATTaGGTCTGGGAGGAGGATGTACTTGTGAATGAGGCGCTTGTAGTT +
Preference number: 5 (lower is better)
Translates to: VTLNVIHVPGQLDVH*VWEEDVLVNEALVV
Trigger: AACTACAAGCGCCTCATTCACAAGTACATCCTCCTCCCAGACGCAATGAACATCGAGCTGACCAGGAACATGAATCACATTCAGAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp CTGAATGTGATTCATGTTCCTGGTCAGCTCGATGTTCATTGCGTCTaGGAGGAGGATGTACTTGTGAATGAGGCGCTTGTAGTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LNVIHVPGQLDVHCV*EEDVLVNEALVVGV
Trigger: AACACCAACTACAAGCGCCTCATTCACAAGTACATCCTCCTCCCAGACGCAATGAACATCGAGCTGACCAGGAACATGAATCACATTCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp GACCATTGGCATGGAGTCCATAAGGCTGGAAAACTTGAATTTATTTaGGTGCTGACGGTAAACATGGTCACTCAGGATCTGAGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: DHWHGVHKAGKLEFI*VLTVNMVTQDLSGS
Trigger: CGAGCCACTCAGATCCTGAGTGACCATGTTTACCGTCAGCACCCAAATAAATTCAAGTTTTCCAGCCTTATGGACTCCATGCCAATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TACTCCAGGTCACTGAGGATATACTGGCACCTCTTCGCCAGCACGTaGTTCATCATGTCATTGGGAATATGCACATTTGCTTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: YSRSLRIYWHLFAST*FIMSLGICTFALVS
Trigger: AGACACCAAAGCAAATGTGCATATTCCCAATGACATGATGAACCACGTGCTGGCGAAGAGGTGCCAGTATATCCTCAGTGACCTGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TTTTCATATTCTTCTCGGTATTTGATATGGCTGGCCAGGTGCTTCTaGTTCTTGGCATGTGTCAGGGACAAGGTGCTGGTAGGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: FSYSSRYLIWLARCF*FLACVRDKVLVGRL
Trigger: TAACCTGCCTACCAGCACCTTGTCCCTGACACATGCCAAGAACCAGAAGCACCTGGCCAGCCATATCAAATACCGAGAAGAATATGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp CAGCTCACTCAGATGCGTCTTCAGTTCCTGCACTTTTCTGTATTCTaGGGTGTCAAGCACCACTTTGTATTTGTCTCTCATCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: QLTQMRLQFLHFSVF*GVKHHFVFVSHLPG
Trigger: GCCAGGAAGATGAGAGACAAATACAAAGTGGTGCTTGACACCCCAGAATACAGAAAAGTGCAGGAACTGAAGACGCATCTGAGTGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCACCGGCTTTGCTGGTaGTGGCTGTGCCAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHRLCW*WLCQRW
Trigger: CCAGCGCTGGCACAGCCACAACCAGCAAAGCCGGTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCGTATGGCTGTCCCTTaGCTTTCTCATAGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRMAVP*LSHSSL
Trigger: AAGAGAACTATGAGAAAGCAAAGGGACAGCCATACG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCTTGTATAAAACCTaGCTGACTTGCTGCGACACT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYCLYKT*LTCCDT
Trigger: AGTGTCGCAGCAAGTCAGCAAGGTTTTATACAAGCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAACATGGCTGTGTTCTaGACGGCTTGGACAAGTTCA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVNMAVF*TAWTSS
Trigger: TGAACTTGTCCAAGCCGTCAAGAACACAGCCATGTT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTTTGTATTTTACCTaGCTAGCAGCGACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCLYFT*LAATPA
Trigger: GGCTGGAGTCGCTGCTAGCAAGGTAAAATACAAACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTGAGATTTCTTAGCTaGGGTGACTTGGATCATGTC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLRFLS*GDLDHV
Trigger: GACATGATCCAAGTCACCCAAGCTAAGAAATCTCAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATCGTCTTGGAGACTTaGGAATCCGACCATTTTCCC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIVLET*ESDHFP
Trigger: GGGAAAATGGTCGGATTCCAAAGTCTCCAAGACGAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATCGTCTTGGAGACTTaGGAATCCGACCATTTTCCC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRIVLET*ESDHFP
Trigger: GGGAAAATGGTCGGATTCCAAAGTCTCCAAGACGAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAGTTTAGGATCGTCTaGGAGACTTTGGAATCCGAC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQFRIV*ETLESD
Trigger: GTCGGATTCCAAAGTCTCCAAGACGATCCTAAACTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGTGCATCATGTTCTaGGATAGCTCCAGGTCCATA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMCIMF*DSSRSI
Trigger: TATGGACCTGGAGCTATCCAAGAACATGATGCACAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGGACATTGTTGCCTTaGGCTATTAAGTCATGCCAG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRTLLP*AIKSCQ
Trigger: CTGGCATGACTTAATAGCCAAAGGCAACAATGTCCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAACGTGCTTTCCCTTaGCCTTCTCATAAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQRAFP*PSHKPL
Trigger: AAGAGGCTTATGAGAAGGCAAAGGGAAAGCACGTTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAACGTGCTTTCCCTTaGCCTTCTCATAAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQRAFP*PSHKPL
Trigger: AAGAGGCTTATGAGAAGGCAAAGGGAAAGCACGTTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACTGAGAAAGCCAATTaGCTTGCCTCTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTEKAN*LASGFL
Trigger: GAGAAAGCCAGAGGCAAGCAAATTGGCTTTCTCAGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGCTGGTCTTGTCTTaGTTCCACTTCTCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMLVLS*FHFSVY
Trigger: GTACACTGAGAAGTGGAACAAAGACAAGACCAGCAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGTGGATTTTTGTCTaGTCAGCCTCCCATGCTTGT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMWIFV*SASHAC
Trigger: ACAAGCATGGGAGGCTGACAAGACAAAAATCCACAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGGAATGGACTAATTaGGGATCATCCTCCAGACTG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMEWTN*GSSSRL
Trigger: CAGTCTGGAGGATGATCCCAAATTAGTCCATTCCAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATTTCTGTCTGGAGGTaGGCGGTATTTCTTCTCACT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYISVWR*AVFLLT
Trigger: AGTGAGAAGAAATACCGCCAACCTCCAGACAGAAAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATTCTTGGCCAATACTaGCTCCAGAGAATCAGTCAC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYILGQY*LQRISH
Trigger: GTGACTGATTCTCTGGAGCAAGTATTGGCCAAGAAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTGATGGCATTATTCTaGGCCAATACTTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVMALF*ANTCSR
Trigger: TCTGGAGCAAGTATTGGCCAAGAATAATGCCATCAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCACTGGAGATCTGACTaGTACACATTATCACTCTGG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHWRSD*YTLSLW
Trigger: CCAGAGTGATAATGTGTACAAGTCAGATCTCCAGTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAAGGTTTGGCATTTCTaGGCCAACACAATACCAAGC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYKVWHF*ANTIPS
Trigger: GCTTGGTATTGTGTTGGCCAAGAAATGCCAAACCTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACATGGATCGTTTTCTaGTCATTGTCCCAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTWIVF*SLSQAS
Trigger: GGAAGCCTGGGACAATGACAAGAAAACGATCCATGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCGCAGGTCATAGCCTaGCCTCCTGGCCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAQVIA*PPGLLQ
Trigger: CTGGAGGAGGCCAGGAGGCAAGGCTATGACCTGCGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATATTGGCAGAATaGCTCTTGGCCAGCAGGATT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLILAE*LLASRI
Trigger: AATCCTGCTGGCCAAGAGCAATTCTGCCAATATCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGAGGCCTTGGCACTTTaGATGGAAATAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGEALAL*MEIASS
Trigger: AGAGGATGCTATTTCCATCAAAAGTGCCAAGGCCTC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATCTCCTGGGCATTTTaGACTCTCAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGISWAF*TLRTSG
Trigger: TCCTGAAGTCCTGAGAGTCAAAAATGCCCAGGAGAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATCTCCTGGGCATTTTaGACTCTCAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRISWAF*TLRTSG
Trigger: TCCTGAAGTCCTGAGAGTCAAAAATGCCCAGGAGAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATCTCCTGGGCATTTTaGACTCTCAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVISWAF*TLRTSG
Trigger: TCCTGAAGTCCTGAGAGTCAAAAATGCCCAGGAGAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTGAATAACATCATTTaGGTCAGGGTGGCACGTCCA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLNNII*VRVARP
Trigger: TGGACGTGCCACCCTGACCAAAATGATGTTATTCAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGAATAACATCATTTaGGTCAGGGTGGCACGTCCA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLNNII*VRVARP
Trigger: TGGACGTGCCACCCTGACCAAAATGATGTTATTCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCTTGGCTCCAACAATaGGAATATAGCGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVAWLQQ*EYSAHP
Trigger: TGGATGAGCGCTATATTCCAATTGTTGGAGCCAAGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGGTCATATGATTTCTaGGCATGGAGAATCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRSYDF*AWRIWG
Trigger: ACCCCAGATTCTCCATGCCAAGAAATCATATGACCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTATCCCAGGCCTCTTaGTATATGTTGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLSQAS*YMLLLY
Trigger: GTACAGCAGCAACATATACAAAGAGGCCTGGGATAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAGGTGAGGTCATCCTaGTATACAATGTCGCTGATC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQVRSS*YTMSLI
Trigger: GATCAGCGACATTGTATACAAGGATGACCTCACCTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAGGTGAGGTCATCCTaGTATACAATGTCGCTGATC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQVRSS*YTMSLI
Trigger: GATCAGCGACATTGTATACAAGGATGACCTCACCTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGGTCATAAGCATGCTTaGCATGGAGAATTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYGHKHA*HGEFQE
Trigger: CTCCTGAAATTCTCCATGCAAAGCATGCTTATGACC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCTTGTAGTCATTCCTaGTCTTCTGCACGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGACSHS*SSAREL
Trigger: AAGCTCACGTGCAGAAGACAAGGAATGACTACAAGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCACTAGTAACGTTGTaGACTCTCCGGACATGGACA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSLVTL*TLRTWT
Trigger: TGTCCATGTCCGGAGAGTCAACAACGTTACTAGTGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTGTGTCTTCTTGACTaGGCGGATTTCAGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLCLLD*ADFRCV
Trigger: GACACACCTGAAATCCGCCAAGTCAAGAAGACACAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCTTCTTGTGTCTTCTaGACTTGGCGGATTTCAGGT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVASCVF*TWRISG
Trigger: ACCTGAAATCCGCCAAGTCAAGAAGACACAAGAAGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACACGTCTTTAGCGTGTaGCAAAGCTGTGGTCTGATT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHVFSV*QSCGLI
Trigger: AATCAGACCACAGCTTTGCAACACGCTAAAGACGTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCACGTCTTTAGCGTGTaGCAAAGCTGTGGTCTGATT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHVFSV*QSCGLI
Trigger: AATCAGACCACAGCTTTGCAACACGCTAAAGACGTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCAGTGACAGAAAGCTaGCAGCCCTTGAGAAACTCT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSVTES*QPLRNS
Trigger: AGAGTTTCTCAAGGGCTGCAAGCTTTCTGTCACTGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCAGTGACAGAAAGCTaGCAGCCCTTGAGAAACTCT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSVTES*QPLRNS
Trigger: AGAGTTTCTCAAGGGCTGCAAGCTTTCTGTCACTGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTCTTGACATGGTCCTaGTACTTGTTCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFLTWS*YLFSDT
Trigger: GGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCCTGGGTGGCCTTCTaGATGTCTGGCCGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAWVAF*MSGRSA
Trigger: GGCTGACCGGCCAGACATCAAGAAGGCCACCCAGGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACCTCGCTTGCAAGGTaGTTGGCATCTTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTSLAR*LASFIV
Trigger: AACTATGAAAGATGCCAACAACCTTGCAAGCGAGGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGTCAGTCACAGGTTaGTGGAGTTTCTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMSVTG*WSFFRS
Trigger: TGACCTGAAGAAACTCCACAAACCTGTGACTGACAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAAGTCCAGCATGGGCTaGCCTCGTTCTTTTTCATAT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYKSSMG*PRSFSY
Trigger: ATATGAAAAAGAACGAGGCAAGCCCATGCTGGACTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTGCCCATGTTCTCTTaGTATAGCACCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLPMFS*YSTELK
Trigger: CTTTAGCTCGGTGCTATACAAAGAGAACATGGGCAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036934.12
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTTCTTGGTTGCGTTaGGCTCTCTCCATGTCTGGA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFSWLR*ALSMSG
Trigger: TCCAGACATGGAGAGAGCCAAACGCAACCAAGAAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTTCTTGGTTGCGTTaGGCTCTCTCCATGTCTGGA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFSWLR*ALSMSG
Trigger: TCCAGACATGGAGAGAGCCAAACGCAACCAAGAAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGCTTTCCCTTGTATTaGTTTCCGGAAGCTATCGGA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSFPLY*FPEAIG
Trigger: TCCGATAGCTTCCGGAAACAAATACAAGGGAAAGCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATAGGCAGCTTTCCCTaGTATTTGTTTCCGGAAGCT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIGSFP*YLFPEA
Trigger: AGCTTCCGGAAACAAATACAAGGGAAAGCTGCCTAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACCTGTAATGGTATCTaGATCCTGGTCATTCCGCTT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTCNGI*ILVIPL
Trigger: AAGCGGAATGACCAGGATCAAGATACCATTACAGGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGCACTGGCAGATCTaGACTGGTCCCGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVHWQI*TGPGSG
Trigger: GCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGCAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGTAAGCTGTTGAAGTaGCAGAGAAGAAGGCACCTC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCKLLK*QRRRHL
Trigger: GAGGTGCCTTCTTCTCTGCAACTTCAACAGCTTACA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGTAAGCTGTTGAAGTaGCAGAGAAGAAGGCACCTC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCKLLK*QRRRHL
Trigger: GAGGTGCCTTCTTCTCTGCAACTTCAACAGCTTACA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGATGGCATTCAGTTaGGACTGCAACATCACAGGT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWMAFS*DCNITG
Trigger: ACCTGTGATGTTGCAGTCCAAACTGAATGCCATCCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACATTCCAGGTCTGACTaGTACACATTATCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGHSRSD*YTLSLC
Trigger: GCAGAGCGATAATGTGTACAAGTCAGACCTGGAATG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp TCCTTGTATACAATGTCGCTGATCTGGTCTGTCACTTTTCTGACGTaGCTGTTGACTTGTAAGTCAGGGTGGCAAATCCACTCATGGAGG +
Preference number: 5 (lower is better)
Translates to: SLYTMSLIWSVTFLT*LLTCKSGWQIHSWR
Trigger: CCTCCATGAGTGGATTTGCCACCCTGACTTACAAGTCAACAGTCACGTCAGAAAAGTGACAGACCAGATCAGCGACATTGTATACAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp ACTTCGGGATTGAATGTTGTCTTCTGCCGGATCATAGTCAAAAACTaGACCAGGGTTAGTACGCCAGACACGCAGACCTGTAATGGTATC +
Preference number: 5 (lower is better)
Translates to: TSGLNVVFCRIIVKN*TRVSTPDTQTCNGI
Trigger: GATACCATTACAGGTCTGCGTGTCTGGCGTACTAACCCTGGTTCAGTTTTTGACTATGATCCGGCAGAAGACAACATTCAATCCCGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp CAGGTTATAAGCATTGACTCTGTGCTGGATGAATTCCGGTGCATCTaGTGGCACGCTGCACTTGAATTTCTCACCTTCATGCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: QVISIDSVLDEFRCI*WHAALEFLTFMLCF
Trigger: AAAGCAAAGCATGAAGGTGAGAAATTCAAGTGCAGCGTGCCAGCAGATGCACCGGAATTCATCCAGCACAGAGTCAATGCTTATAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp ATCACTCAGGTTATAAGCATTGACTCTGTGCTGGATGAATTCCGGTaGATCTGCTGGCACGCTGCACTTGAATTTCTCACCTTCATGCTT +
Preference number: 5 (lower is better)
Translates to: ITQVISIDSVLDEFR*ICWHAALEFLTFML
Trigger: AAGCATGAAGGTGAGAAATTCAAGTGCAGCGTGCCAGCAGATGCACCGGAATTCATCCAGCACAGAGTCAATGCTTATAACCTGAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp GTTTGTTTTTCTCATCCTCGAGGGAACCAGAAGGTATCCAGCCAATaGCTTTCAGCCACTGAAGATCAGCCTTGTACACATTATCGCTCT +
Preference number: 5 (lower is better)
Translates to: VCFSHPRGNQKVSSQ*LSATEDQPCTHYRS
Trigger: AGAGCGATAATGTGTACAAGGCTGATCTTCAGTGGCTGAAAGGCATTGGCTGGATACCTTCTGGTTCCCTCGAGGATGAGAAAAACAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp ATGTCAGGAGTGTCATACAGGAAGCAGCCAAGCCCCTTCAAGATCTaGAGATCCTCTTTGTATTTAATATCACTCGTGATGTCTCCCACG +
Preference number: 5 (lower is better)
Translates to: MSGVSYRKQPSPFKI*RSSLYLISLVMSPT
Trigger: CGTGGGAGACATCACGAGTGATATTAAATACAAAGAGGATCTGCAGATCTTGAAGGGGCTTGGCTGCTTCCTGTATGACACTCCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp GACAAACTTCTTTTTGTAGTTTGTATCACTGACGTGCTTGGTCACTaGCTTGACGTGAACTGTATCCCTGGTCTCTGGCAGGGTCGTATA +
Preference number: 5 (lower is better)
Translates to: DKLLFVVCITDVLGH*LDVNCIPGLWQGRI
Trigger: TATACGACCCTGCCAGAGACCAGGGATACAGTTCACGTCAAGGCAGTGACCAAGCACGTCAGTGATACAAACTACAAAAAGAAGTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp AACCTCACTGAGTTGATCCTGGACTTTCTTGATTCTGCGAAGTTCTaGAGTATCACTTGTGATGGCGTATGGCTGTCCCTTTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: NLTELILDFLDSAKF*SITCDGVWLSLCFL
Trigger: GAGAAAGCAAAGGGACAGCCATACGCCATCACAAGTGATACTCCAGAACTTCGCAGAATCAAGAAAGTCCAGGATCAACTCAGTGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp CACCAGGACAGGAGAGTCTGTGACTTGAGTGAACTTTGTCTTATCTaGGTGGACTTTGTAGGCGTGATCTTTACACTGGTCCAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: HQDRRVCDLSELCLI*VDFVGVIFTLVQFL
Trigger: AAGAAACTGGACCAGTGTAAAGATCACGCCTACAAAGTCCACCCAGATAAGACAAAGTTCACTCAAGTCACAGACTCTCCTGTCCTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp ATTTATTTGGGTGCTGACGGTAAACATGGTCACTCAGGATCTGAGTaGCTCGTTTGTTTTTCTCATCCTCGAGGGAACCAGAAGGTATCC +
Preference number: 5 (lower is better)
Translates to: IYLGADGKHGHSGSE*LVCFSHPRGNQKVS
Trigger: GGATACCTTCTGGTTCCCTCGAGGATGAGAAAAACAAACGAGCCACTCAGATCCTGAGTGACCATGTTTACCGTCAGCACCCAAATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TTTCCCACTCTGCATCTGCTGAGACTCTTTGGCAGTGATGTATGTTaGAGTCTCAAAGTCCAGCATGGGCTTGCCTCGTTCTTTTTCATA +
Preference number: 5 (lower is better)
Translates to: FPTLHLLRLFGSDVC*SLKVQHGLASFFFI
Trigger: TATGAAAAAGAACGAGGCAAGCCCATGCTGGACTTTGAGACTCCAACATACATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGTATGGCTGTCCCTTaGCTTTCTCATAGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRMAVP*LSHSSL
Trigger: AAGAGAACTATGAGAAAGCAAAGGGACAGCCATACG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGTATGGCTGTCCCTTaGCTTTCTCATAGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRMAVP*LSHSSL
Trigger: AAGAGAACTATGAGAAAGCAAAGGGACAGCCATACG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGCTTGTATAAAACCTaGCTGACTTGCTGCGACACT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGCLYKT*LTCCDT
Trigger: AGTGTCGCAGCAAGTCAGCAAGGTTTTATACAAGCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGCTTGTATAAAACCTaGCTGACTTGCTGCGACACT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCLYKT*LTCCDT
Trigger: AGTGTCGCAGCAAGTCAGCAAGGTTTTATACAAGCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTCTTCCCAGTTCTGCTaGTATAAAACCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYSSQFC*YKTLLT
Trigger: AGTCAGCAAGGTTTTATACAAGCAGAACTGGGAAGA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGGTTGGTTACTTTCTaGGCAAATTCGACCTCAGGA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGWLVTF*ANSTSG
Trigger: TCCTGAGGTCGAATTTGCCAAGAAAGTAACCAACCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGTTGGTTACTTTCTaGGCAAATTCGACCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWLVTF*ANSTSG
Trigger: TCCTGAGGTCGAATTTGCCAAGAAAGTAACCAACCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGTTGGTTACTTTCTaGGCAAATTCGACCTCAGGA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWLVTF*ANSTSG
Trigger: TCCTGAGGTCGAATTTGCCAAGAAAGTAACCAACCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCATTCATTCTGGCTGTaGCAATTTCAAAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHSFWL*QFQSMV
Trigger: CACCATGCTTTGAAATTGCAACAGCCAGAATGAATG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGGAGAGTCTGTGACTaGAGTGAACTTTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRRVCD*SELCLI
Trigger: GATAAGACAAAGTTCACTCAAGTCACAGACTCTCCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCTCTTCTCCCAGTCTaGTTTGTAGACATTGTCACT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVALLPV*FVDIVT
Trigger: AGTGACAATGTCTACAAACAAGACTGGGAGAAGAGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTGAGATTTCTTAGCTaGGGTGACTTGGATCATGTC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLRFLS*GDLDHV
Trigger: GACATGATCCAAGTCACCCAAGCTAAGAAATCTCAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGTGCATCATGTTCTaGGATAGCTCCAGGTCCATA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMCIMF*DSSRSI
Trigger: TATGGACCTGGAGCTATCCAAGAACATGATGCACAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTTTTTAACTTTCTCTaGGTCAAGGCTACCAATCGG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLFNFL*VKATNR
Trigger: CCGATTGGTAGCCTTGACCAAGAGAAAGTTAAAAAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGAGTGTGTCCGGATGTaGCCTGTATTTCTTTTCACT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRECVRM*PVFLFT
Trigger: AGTGAAAAGAAATACAGGCAACATCCGGACACACTC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGGACATTGTTGCCTTaGGCTATTAAGTCATGCCAG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRTLLP*AIKSCQ
Trigger: CTGGCATGACTTAATAGCCAAAGGCAACAATGTCCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTGATTGGCATTCCTaGTGTGCTCAAGACTCAAGG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFDWHS*CAQDSR
Trigger: CCTTGAGTCTTGAGCACACAAGGAATGCCAATCAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCCTTGAAGAAGCTGTaGTACTCGTCTTTGTACACA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPLKKL*YSSLYT
Trigger: TGTGTACAAAGACGAGTACAACAGCTTCTTCAAGGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCCCTTGAAGAAGCTGTaGTACTCGTCTTTGTACACA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVPLKKL*YSSLYT
Trigger: TGTGTACAAAGACGAGTACAACAGCTTCTTCAAGGG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGTTCCTTGAACTTTaGGCAGCAACGATGGGAATG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMFLEL*AATMGM
Trigger: CATTCCCATCGTTGCTGCCAAAAGTTCAAGGAACAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATTATCACTCTGGATTaGCATGGCATTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIITLD*HGIPGV
Trigger: CACTCCAGGAATGCCATGCAAATCCAGAGTGATAAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATTATCACTCTGGATTaGCATGGCATTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRIITLD*HGIPGV
Trigger: CACTCCAGGAATGCCATGCAAATCCAGAGTGATAAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTCAGCTTGTTGCTTTaGTTAAGTGCCTGTTCCATG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVSLLL*LSACSM
Trigger: CATGGAACAGGCACTTAACAAAAGCAACAAGCTGAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTCAGCTTGTTGCTTTaGTTAAGTGCCTGTTCCATG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVSLLL*LSACSM
Trigger: CATGGAACAGGCACTTAACAAAAGCAACAAGCTGAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGCTGGTCTTGTCTTaGTTCCACTTCTCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMLVLS*FHFSVY
Trigger: GTACACTGAGAAGTGGAACAAAGACAAGACCAGCAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGCTGGTCTTGTCTTaGTTCCACTTCTCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMLVLS*FHFSVY
Trigger: GTACACTGAGAAGTGGAACAAAGACAAGACCAGCAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGCTGGTCTTGTCTTaGTTCCACTTCTCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMLVLS*FHFSVY
Trigger: GTACACTGAGAAGTGGAACAAAGACAAGACCAGCAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTGCTTCCCTTTGGATaGTTCATAGGCTTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVLPFG*FIGLLV
Trigger: TACAAGCAAGCCTATGAACAATCCAAAGGGAAGCAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACCAAGACCATGTTCATaGAGTCCATTAGTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRPRPCS*SPLVWS
Trigger: ACTCCACACTAATGGACTCAATGAACATGGTCTTGG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGTGGATTTTTGTCTaGTCAGCCTCCCATGCTTGT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMWIFV*SASHAC
Trigger: ACAAGCATGGGAGGCTGACAAGACAAAAATCCACAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGTGGATTTTTGTCTaGTCAGCCTCCCATGCTTGT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMWIFV*SASHAC
Trigger: ACAAGCATGGGAGGCTGACAAGACAAAAATCCACAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGGAATGGACTAATTaGGGATCATCCTCCAGACTG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMEWTN*GSSSRL
Trigger: CAGTCTGGAGGATGATCCCAAATTAGTCCATTCCAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAATATGGTGTCCCAGTaGTTTCCGGTAGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRNMVSQ*FPVALF
Trigger: AAACAAGGCTACCGGAAACAACTGGGACACCATATT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTGTCGCTCTGCATTTaGGCTACATTCATTGATAGC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLSLCI*ATFIDS
Trigger: GCTATCAATGAATGTAGCCAAAATGCAGAGCGACAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTGTCGCTCTGCATTTaGGCTACATTCATTGATAGC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLSLCI*ATFIDS
Trigger: GCTATCAATGAATGTAGCCAAAATGCAGAGCGACAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATAGACCTTTTTAGCTaGGATGACGTCATTCTGGTC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYIDLFS*DDVILV
Trigger: GACCAGAATGACGTCATCCAAGCTAAAAAGGTCTAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATTTCTGTCTGGAGGTaGGCGGTATTTCTTCTCACT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGISVWR*AVFLLT
Trigger: AGTGAGAAGAAATACCGCCAACCTCCAGACAGAAAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTGATGGCATTATTCTaGGCCAATACTTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVMALF*ANTCSR
Trigger: TCTGGAGCAAGTATTGGCCAAGAATAATGCCATCAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTGATGGCATTATTCTaGGCCAATACTTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVMALF*ANTCSR
Trigger: TCTGGAGCAAGTATTGGCCAAGAATAATGCCATCAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCACTGGAGATCTGACTaGTACACATTATCACTCTGG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHWRSD*YTLSLW
Trigger: CCAGAGTGATAATGTGTACAAGTCAGATCTCCAGTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAAGGTTTGGCATTTCTaGGCCAACACAATACCAAGC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRKVWHF*ANTIPS
Trigger: GCTTGGTATTGTGTTGGCCAAGAAATGCCAAACCTT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTATCCTGTTGAGTTaGGCCAGCATGATTTCTGGC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFILLS*ASMISG
Trigger: GCCAGAAATCATGCTGGCCAAACTCAACAGGATAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTATCCTGTTGAGTTaGGCCAGCATGATTTCTGGC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFILLS*ASMISG
Trigger: GCCAGAAATCATGCTGGCCAAACTCAACAGGATAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTTATCCTGTTGAGTTaGGCCAGCATGATTTCTGGC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFILLS*ASMISG
Trigger: GCCAGAAATCATGCTGGCCAAACTCAACAGGATAAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGATTCATCCCATCCCTaGGTATATAGTTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYDSSHP*VYSLWL
Trigger: CAGCCATAAACTATATACCAAGGGATGGGATGAATC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCATAGTCCTTCATCTTaGATTCATCCCATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHSPSS*IHPIPW
Trigger: CCAAGGGATGGGATGAATCAAAGATGAAGGACTATG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATAGTCCTTCATCTTaGATTCATCCCATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHSPSS*IHPIPW
Trigger: CCAAGGGATGGGATGAATCAAAGATGAAGGACTATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTCACTGCTCTGTTTaGCTGTCACATAATCCACTC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSHCSV*LSHNPL
Trigger: GAGTGGATTATGTGACAGCAAAACAGAGCAGTGAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTCACTGCTCTGTTTaGCTGTCACATAATCCACTC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSHCSV*LSHNPL
Trigger: GAGTGGATTATGTGACAGCAAAACAGAGCAGTGAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTATTTCAGCTCACTTaGAACATCGCTGGAATGATG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVFQLT*NIAGMM
Trigger: CATCATTCCAGCGATGTTCAAAGTGAGCTGAAATAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCAAACCAAACCAGCTaGGGATCGTCTCTCATTGTA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSNQTS*GSSLIV
Trigger: TACAATGAGAGACGATCCCAAGCTGGTTTGGTTTGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCAAACCAAACCAGCTaGGGATCGTCTCTCATTGTA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSNQTS*GSSLIV
Trigger: TACAATGAGAGACGATCCCAAGCTGGTTTGGTTTGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGGTCATATGATTTCTaGGCATGGAGAATCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRSYDF*AWRIWG
Trigger: ACCCCAGATTCTCCATGCCAAGAAATCATATGACCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTATCCCAGGCCTCTTaGTATATGTTGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLSQAS*YMLLLY
Trigger: GTACAGCAGCAACATATACAAAGAGGCCTGGGATAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTATCCCAGGCCTCTTaGTATATGTTGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLSQAS*YMLLLY
Trigger: GTACAGCAGCAACATATACAAAGAGGCCTGGGATAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCGTCGTCAACACTTTTaGGTAATGTGTAAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRRQHF*VMCKGL
Trigger: AAGCCCTTTACACATTACCAAAAAGTGTTGACGACG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCATAAGCATGCTTaGCATGGAGAATTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGHKHA*HGEFQE
Trigger: CTCCTGAAATTCTCCATGCAAAGCATGCTTATGACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTCATAAGCATGCTTaGCATGGAGAATTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGHKHA*HGEFQE
Trigger: CTCCTGAAATTCTCCATGCAAAGCATGCTTATGACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGTGTCAAGCACCACTTaGTATTTGTCTCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYVSSTT*YLSLIF
Trigger: GAAGATGAGAGACAAATACAAAGTGGTGCTTGACAC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACACAACCGAGGTGAATTaGTCCTTTGACTTCTCATAC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYTTEVN*SFDFSY
Trigger: GTATGAGAAGTCAAAGGACAAATTCACCTCGGTTGT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATATCACTGATTTGCTaGTTGACTTTTGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYISLIC*LTFVVR
Trigger: GCGCACCACAAAAGTCAACAAGCAAATCAGTGATAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACATGGTCCTTGTACTaGTTCTCAGACACCAGATTG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTWSLY*FSDTRL
Trigger: CAATCTGGTGTCTGAGAACAAGTACAAGGACCATGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACATGGTCCTTGTACTaGTTCTCAGACACCAGATTG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTWSLY*FSDTRL
Trigger: CAATCTGGTGTCTGAGAACAAGTACAAGGACCATGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACATGGTCCTTGTACTaGTTCTCAGACACCAGATTG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTWSLY*FSDTRL
Trigger: CAATCTGGTGTCTGAGAACAAGTACAAGGACCATGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCTTGACATGGTCCTaGTACTTGTTCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFLTWS*YLFSDT
Trigger: GGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCTTGACATGGTCCTaGTACTTGTTCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFLTWS*YLFSDT
Trigger: GGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCTTGACATGGTCCTaGTACTTGTTCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFLTWS*YLFSDT
Trigger: GGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACCTCACTGGCCTGTTaGGCTGCCTGGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITSLAC*AAWVAF
Trigger: GAAGGCCACCCAGGCAGCCAAACAGGCCAGTGAGGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACCTCGCTTGCAAGGTaGTTGGCATCTTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTSLAR*LASFIV
Trigger: AACTATGAAAGATGCCAACAACCTTGCAAGCGAGGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACCTCGCTTGCAAGGTaGTTGGCATCTTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTSLAR*LASFIV
Trigger: AACTATGAAAGATGCCAACAACCTTGCAAGCGAGGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATGTCAGTCACAGGTTaGTGGAGTTTCTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGMSVTG*WSFFRS
Trigger: TGACCTGAAGAAACTCCACAAACCTGTGACTGACAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGTCAGTCACAGGTTaGTGGAGTTTCTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMSVTG*WSFFRS
Trigger: TGACCTGAAGAAACTCCACAAACCTGTGACTGACAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAAGTCCAGCATGGGCTaGCCTCGTTCTTTTTCATAT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRKSSMG*PRSFSY
Trigger: ATATGAAAAAGAACGAGGCAAGCCCATGCTGGACTT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTCTCGCTTGCTATTTaGGTTGCATGTCTGACATGT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFSLAI*VACLTC
Trigger: ACATGTCAGACATGCAACCAAAATAGCAAGCGAGAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATTTCTGCCGATTGCTaGTACTTAATCTGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVISADC*YLIWLA
Trigger: TGCCAGCCAGATTAAGTACAAGCAATCGGCAGAAAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATTTCTGCCGATTGCTaGTACTTAATCTGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRISADC*YLIWLA
Trigger: TGCCAGCCAGATTAAGTACAAGCAATCGGCAGAAAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATTTCTGCCGATTGCTaGTACTTAATCTGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGISADC*YLIWLA
Trigger: TGCCAGCCAGATTAAGTACAAGCAATCGGCAGAAAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAAGGTCACACTGGTATaGAAGCAGGCTGAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGKVTLV*KQAEVL
Trigger: AAGAACTTCAGCCTGCTTCAATACCAGTGTGACCTT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAAGGTCACACTGGTATaGAAGCAGGCTGAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRKVTLV*KQAEVL
Trigger: AAGAACTTCAGCCTGCTTCAATACCAGTGTGACCTT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGCTTTCCCTTGTATTaGTTTCCGGAAGCTATCGGA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSFPLY*FPEAIG
Trigger: TCCGATAGCTTCCGGAAACAAATACAAGGGAAAGCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATAGGCAGCTTTCCCTaGTATTTGTTTCCGGAAGCT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRIGSFP*YLFPEA
Trigger: AGCTTCCGGAAACAAATACAAGGGAAAGCTGCCTAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATAGGCAGCTTTCCCTaGTATTTGTTTCCGGAAGCT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGIGSFP*YLFPEA
Trigger: AGCTTCCGGAAACAAATACAAGGGAAAGCTGCCTAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCATGATATTTCACTGTaGAGATGTGCCGTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHDISL*RCAVGF
Trigger: AAACCCAACGGCACATCTCAACAGTGAAATATCATG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACCTGTAATGGTATCTaGATCCTGGTCATTCCGCTT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTCNGI*ILVIPL
Trigger: AAGCGGAATGACCAGGATCAAGATACCATTACAGGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAACCTGTAATGGTATCTaGATCCTGGTCATTCCGCTT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRTCNGI*ILVIPL
Trigger: AAGCGGAATGACCAGGATCAAGATACCATTACAGGT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCATGTTTGTAAGCTGTaGAAGTTGCAGAGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYHVCKL*KLQRRR
Trigger: CCTTCTTCTCTGCAACTTCAACAGCTTACAAACATG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTCCCCAGGTTTTCTTaGTATAGCACCGAACTAAAG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVPRFS*YSTELK
Trigger: CTTTAGTTCGGTGCTATACAAAGAAAACCTGGGGAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTCCCCAGGTTTTCTTaGTATAGCACCGAACTAAAG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVPRFS*YSTELK
Trigger: CTTTAGTTCGGTGCTATACAAAGAAAACCTGGGGAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp GGCTACCCTTCTCAGCTCCGGACTGTCATTATAGGGATAAAACAATaGCTTGTCTGCTTCCCAGTCTTCAGTGTACAGTTTCTTACTGAA +
Preference number: 5 (lower is better)
Translates to: GYPSQLRTVIIGIKQ*LVCFPVFSVQFLTE
Trigger: TTCAGTAAGAAACTGTACACTGAAGACTGGGAAGCAGACAAGGCATTGTTTTATCCCTATAATGACAGTCCGGAGCTGAGAAGGGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp ATCCAGTGGGTGAAGTCGGATTTGTATAGATTATCACTCTGGATTTaGATGGCATTCCTGGAGTGTTCCACATTCAAGGCATCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: IQWVKSDLYRLSLWI*MAFLECSTFKASGK
Trigger: CTTGCCTGATGCCTTGAATGTGGAACACTCCAGGAATGCCATGCAAATCCAGAGTGATAATCTATACAAATCCGACTTCACCCACTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp CTTCGCCAGCACGTGGTTCATCATGTCATTGGGAATATGCACATTTaGTTTGGTGTCTTCATAATCTCTTCTGTAGTTCAACGCACTCCG +
Preference number: 5 (lower is better)
Translates to: LRQHVVHHVIGNMHI*FGVFIISSVVQRTP
Trigger: CGGAGTGCGTTGAACTACAGAAGAGATTATGAAGACACCAAAGCAAATGTGCATATTCCCAATGACATGATGAACCACGTGCTGGCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TGTCCTTGTCGTTGTGGTCTCATAGACTTCTGTAATTGTCTCTCCTaGCACCTCTTCGTAAACTGTCTCCTCTGTGTAGTACTCTATCAC +
Preference number: 5 (lower is better)
Translates to: CPCRCGLIDFCNCLS*HLFVNCLLCVVLYH
Trigger: GTGATAGAGTACTACACAGAGGAGACAGTTTACGAAGAGGTGCCAGGAGAGACAATTACAGAAGTCTATGAGACCACAACGACAAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp GACGTCACTTATGTTGTAAGCATTGCACTTGGCCTGGAGAAACTGTaGGAGATCAGGATTCAGAGTATACTTATGCTTCACGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DVTYVVSIALGLEKL*EIRIQSILMLHVFS
Trigger: GGAGAAGACGTGAAGCATAAGTATACTCTGAATCCTGATCTCCCACAGTTTCTCCAGGCCAAGTGCAATGCTTACAACATAAGTGACGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp ATTCTGGGGTGTCAAGCACCACTTTGTATTTGTCTCTCATCTTCCTaGCATTATCCGTGTACAGGTAGTTCGACCAGAGTTTCCTTAGGT +
Preference number: 5 (lower is better)
Translates to: ILGCQAPLCICLSSS*HYPCTGSSTRVSLG
Trigger: ACCTAAGGAAACTCTGGTCGAACTACCTGTACACGGATAATGCCAGGAAGATGAGAGACAAATACAAAGTGGTGCTTGACACCCCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp GATCTGGCTCCACATGTGTGTATTGTAGAGAGCAGTCAACATATCTaGACGCAGGATTTCATTACAGCCTTGTTTCAGAAGCATCTTGGC +
Preference number: 5 (lower is better)
Translates to: DLAPHVCIVESSQHI*TQDFITALFQKHLG
Trigger: GCCAAGATGCTTCTGAAACAAGGCTGTAATGAAATCCTGCGTCCAGATATGTTGACTGCTCTCTACAATACACACATGTGGAGCCAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148356.3
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATTTTCTGACTGTGTaGAATGTAGGGGGTCATGAA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHFLTV*NVGGHE
Trigger: TTCATGACCCCCTACATTCAACACAGTCAGAAAATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCATTTTCTGACTGTGTaGAATGTAGGGGGTCATGAA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHFLTV*NVGGHE
Trigger: TTCATGACCCCCTACATTCAACACAGTCAGAAAATG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTTAACCTCACTGAGTaGATCCTGGACTTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLNLTE*ILDFLD
Trigger: ATCAAGAAAGTCCAGGATCAACTCAGTGAGGTTAAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTTAACCTCACTGAGTaGATCCTGGACTTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLNLTE*ILDFLD
Trigger: ATCAAGAAAGTCCAGGATCAACTCAGTGAGGTTAAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTTCCCAGTTCTGCTaGTATAAAACCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSSQFC*YKTLLT
Trigger: AGTCAGCAAGGTTTTATACAAGCAGAACTGGGAAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCTTCCCAGTTCTGCTaGTATAAAACCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSSQFC*YKTLLT
Trigger: AGTCAGCAAGGTTTTATACAAGCAGAACTGGGAAGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGCTTGCTCACTTGGTaGGTTACTTTCTTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVCLLTW*VTFLAN
Trigger: ATTTGCCAAGAAAGTAACCAACCAAGTGAGCAAGCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGCTTGCTCACTTGGTaGGTTACTTTCTTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRCLLTW*VTFLAN
Trigger: ATTTGCCAAGAAAGTAACCAACCAAGTGAGCAAGCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCATTCATTCTGGCTGTaGCAATTTCAAAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHSFWL*QFQSMV
Trigger: CACCATGCTTTGAAATTGCAACAGCCAGAATGAATG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATTCATTCTGGCTGTaGCAATTTCAAAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHSFWL*QFQSMV
Trigger: CACCATGCTTTGAAATTGCAACAGCCAGAATGAATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGGAGAGTCTGTGACTaGAGTGAACTTTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRRVCD*SELCLI
Trigger: GATAAGACAAAGTTCACTCAAGTCACAGACTCTCCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTGTTGAGCTGGGCTaGCAACAGCACGGGAGTGTC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGVELG*QQHGSV
Trigger: GACACTCCCGTGCTGTTGCAAGCCCAGCTCAACACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCTGTGTAGATCGTTTTaGACTTTTCATAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLCRSF*TFHSPS
Trigger: GGAAGGACTATGAAAAGTCAAAAACGATCTACACAG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCAATTGAGGTAAACTaGAGCGTATCTGGATGTTGG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSIEVN*SVSGCW
Trigger: CCAACATCCAGATACGCTCAAGTTTACCTCAATTGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCAATTGAGGTAAACTaGAGCGTATCTGGATGTTGG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSIEVN*SVSGCW
Trigger: CCAACATCCAGATACGCTCAAGTTTACCTCAATTGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATCTTTCAAGTCAGCCTaGTACATATTCTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGSFKSA*YIFSLM
Trigger: CATCAGCGAGAATATGTACAAGGCTGACTTGAAAGA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTTTCAAGTCAGCCTaGTACATATTCTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSFKSA*YIFSLM
Trigger: CATCAGCGAGAATATGTACAAGGCTGACTTGAAAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTTTTTAACTTTCTCTaGGTCAAGGCTACCAATCGG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLFNFL*VKATNR
Trigger: CCGATTGGTAGCCTTGACCAAGAGAAAGTTAAAAAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTTTTTAACTTTCTCTaGGTCAAGGCTACCAATCGG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLFNFL*VKATNR
Trigger: CCGATTGGTAGCCTTGACCAAGAGAAAGTTAAAAAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACTTTTTAACTTTCTCTaGGTCAAGGCTACCAATCGG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLFNFL*VKATNR
Trigger: CCGATTGGTAGCCTTGACCAAGAGAAAGTTAAAAAG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAATCACTTAGCTGCTTaGTGTTCTGCTGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRNHLAA*CSAEPK
Trigger: TTTTGGCTCAGCAGAACACAAAGCAGCTAAGTGATT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAATCACTTAGCTGCTTaGTGTTCTGCTGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVNHLAA*CSAEPK
Trigger: TTTTGGCTCAGCAGAACACAAAGCAGCTAAGTGATT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCCATAGTCAGCTTGTaGCTTTTGTTAAGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSIVSL*LLLSAC
Trigger: ACAGGCACTTAACAAAAGCAACAAGCTGACTATGGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCCATAGTCAGCTTGTaGCTTTTGTTAAGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSIVSL*LLLSAC
Trigger: ACAGGCACTTAACAAAAGCAACAAGCTGACTATGGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGACTGTAAAGTGTTaGATTCTGCTTGGCTTGCAA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLTVKC*ILLGLQ
Trigger: TTGCAAGCCAAGCAGAATCAAACACTTTACAGTCAG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTTTGGCTACATTCATaGATAGCACAAGCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFWLHS*IAQALG
Trigger: ACCCAAAGCTTGTGCTATCAATGAATGTAGCCAAAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATAGACCTTTTTAGCTaGGATGACGTCATTCTGGTC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVIDLFS*DDVILV
Trigger: GACCAGAATGACGTCATCCAAGCTAAAAAGGTCTAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATTTCTGAAGCCCGCTaGTTCTTTTCTGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRISEAR*FFSASK
Trigger: TTTGGAAGCAGAAAAGAACAAGCGGGCTTCAGAAAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAAGCCTTCTTTGTATTaGTATTCACTGGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYKPSLY*YSLAIS
Trigger: GGAGATTGCCAGTGAATACAAATACAAAGAAGGCTT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATTTCAGTGGCCCGTTaGCATTTTTCCACATCCAAA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRISVAR*HFSTSK
Trigger: TTTGGATGTGGAAAAATGCAAACGGGCCACTGAAAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATTTCAGTGGCCCGTTaGCATTTTTCCACATCCAAA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGISVAR*HFSTSK
Trigger: TTTGGATGTGGAAAAATGCAAACGGGCCACTGAAAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGATTCATCCCATCCCTaGGTATATAGTTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVDSSHP*VYSLWL
Trigger: CAGCCATAAACTATATACCAAGGGATGGGATGAATC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGGGCCCACCGGATCTaGTTGTCATCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRAHRI*LSSLAV
Trigger: CACAGCCAGGGATGACAACAAGATCCGGTGGGCCCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACAGGGTATACTTTGACTaGATGGCATTCCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRVYFD*MAFQSL
Trigger: CAAAGATTGGAATGCCATCAAGTCAAAGTATACCCT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGTATTTCAGCTCACTTaGAACATCGCTGGAATGATG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVVFQLT*NIAGMM
Trigger: CATCATTCCAGCGATGTTCAAAGTGAGCTGAAATAC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTATTTCAGCTCACTTaGAACATCGCTGGAATGATG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVFQLT*NIAGMM
Trigger: CATCATTCCAGCGATGTTCAAAGTGAGCTGAAATAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATGTCAGCAGGGATATaGATTTTGGCCTTTGACTTA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYMSAGI*ILAFDL
Trigger: TAAGTCAAAGGCCAAAATCAATATCCCTGCTGACAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTGACTGAGTTAATCTaGGCTAGAACAATCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYLTELI*ARTISG
Trigger: TCCAGAGATTGTTCTAGCCAAGATTAACTCAGTCAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGTTCATCATGTCATaGGGAATATGCACATTTGCT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWFIMS*GICTFA
Trigger: AGCAAATGTGCATATTCCCAATGACATGATGAACCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACGCAGATTTTCTTTACTaGCTGCTGTGTATTGTAGCT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYADFLY*LLCIVA
Trigger: AGCTACAATACACAGCAGCAAGTAAAGAAAATCTGC...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACGTCGTCAACACTTTTaGGTAATGTGTAAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRRQHF*VMCKGL
Trigger: AAGCCCTTTACACATTACCAAAAAGTGTTGACGACG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGTCGTCAACACTTTTaGGTAATGTGTAAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRRQHF*VMCKGL
Trigger: AAGCCCTTTACACATTACCAAAAAGTGTTGACGACG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGTCGTCAACACTTTTaGGTAATGTGTAAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRRQHF*VMCKGL
Trigger: AAGCCCTTTACACATTACCAAAAAGTGTTGACGACG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATGTCGGGCACGATGTaGATTTTCATCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRMSGTM*IFILFF
Trigger: GAAGAACAAGATGAAAATCAACATCGTGCCCGACAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGTCGGGCACGATGTaGATTTTCATCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMSGTM*IFILFF
Trigger: GAAGAACAAGATGAAAATCAACATCGTGCCCGACAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCAGGTGTGTCTGGGGTaGTATGTATCTTGTCTTTTA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVQVCLG*YVSCLL
Trigger: TAAAAGACAAGATACATACAACCCCAGACACACCTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAGGTGTGTCTGGGGTaGTATGTATCTTGTCTTTTA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQVCLG*YVSCLL
Trigger: TAAAAGACAAGATACATACAACCCCAGACACACCTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTGTCAAGCACCACTTaGTATTTGTCTCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVSSTT*YLSLIF
Trigger: GAAGATGAGAGACAAATACAAAGTGGTGCTTGACAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTGTCAAGCACCACTTaGTATTTGTCTCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVSSTT*YLSLIF
Trigger: GAAGATGAGAGACAAATACAAAGTGGTGCTTGACAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATACTTTTTCCTGTATTaGATCTGGCTGATCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRYFFLY*IWLIWS
Trigger: CGACCAGATCAGCCAGATCAAATACAGGAAAAAGTA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTACTTTTTCCTGTATTaGATCTGGCTGATCTGGTCG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYFFLY*IWLIWS
Trigger: CGACCAGATCAGCCAGATCAAATACAGGAAAAAGTA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACAACCGAGGTGAATTaGTCCTTTGACTTCTCATAC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTTEVN*SFDFSY
Trigger: GTATGAGAAGTCAAAGGACAAATTCACCTCGGTTGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATATCACTGATTTGCTaGTTGACTTTTGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVISLIC*LTFVVR
Trigger: GCGCACCACAAAAGTCAACAAGCAAATCAGTGATAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCTCGCTTGCTATTTaGGTTGCATGTCTGACATGT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFSLAI*VACLTC
Trigger: ACATGTCAGACATGCAACCAAAATAGCAAGCGAGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCTCGCTTGCTATTTaGGTTGCATGTCTGACATGT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFSLAI*VACLTC
Trigger: ACATGTCAGACATGCAACCAAAATAGCAAGCGAGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTATACTCTTTCTCGCTaGCTATTTTGGTTGCATGTC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYTLSR*LFWLHV
Trigger: GACATGCAACCAAAATAGCAAGCGAGAAAGAGTATA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCCATTTCTGCCGATaGCTTGTACTTAATCTGGCT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFHFCR*LVLNLA
Trigger: AGCCAGATTAAGTACAAGCAATCGGCAGAAATGGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTCTCTGCATCTTCCTaGTACTTTTTCTGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFSASS*YFFWLE
Trigger: TTCCAGCCAGAAAAAGTACAAGGAAGATGCAGAGAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTCTCTGCATCTTCCTaGTACTTTTTCTGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFSASS*YFFWLE
Trigger: TTCCAGCCAGAAAAAGTACAAGGAAGATGCAGAGAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCTCTGCATCTTCCTaGTACTTTTTCTGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFSASS*YFFWLE
Trigger: TTCCAGCCAGAAAAAGTACAAGGAAGATGCAGAGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTATTTCTGGCGTGTCTaGAACAACTGTAATTTTCCC +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYFWRV*NNCNFP
Trigger: GGGAAAATTACAGTTGTTCAAGACACGCCAGAAATA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCGAGCTGAAATTCTTTaGGTTTTCTTTAACACGCAG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYRAEIL*VFFNTQ
Trigger: CTGCGTGTTAAAGAAAACCAAAAGAATTTCAGCTCG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATGATATTTCACTGTaGAGATGTGCCGTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHDISL*RCAVGF
Trigger: AAACCCAACGGCACATCTCAACAGTGAAATATCATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGGTGTAAAGCAGCCTTaGTGTTTCTCAAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRGVKQP*CFSKSS
Trigger: TGAAGACTTTGAGAAACACAAAGGCTGCTTTACACC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTGTAAAGCAGCCTTaGTGTTTCTCAAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGGVKQP*CFSKSS
Trigger: TGAAGACTTTGAGAAACACAAAGGCTGCTTTACACC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACATGTTTGTAAGCTGTaGAAGTTGCAGAGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRHVCKL*KLQRRR
Trigger: CCTTCTTCTCTGCAACTTCAACAGCTTACAAACATG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACATGTTTGTAAGCTGTaGAAGTTGCAGAGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGHVCKL*KLQRRR
Trigger: CCTTCTTCTCTGCAACTTCAACAGCTTACAAACATG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGATTTCATTACAGCCTaGTTTCAGAAGCATCTTGGC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGDFITA*FQKHLG
Trigger: GCCAAGATGCTTCTGAAACAAGGCTGTAATGAAATC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTACTTTTTCCTGTATTaGATCTGGCTCCACATGTGT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYYFFLY*IWLHMC
Trigger: ACACATGTGGAGCCAGATCAAATACAGGAAAAAGTA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238749.2
CDS TCA 90 bp TTTCCGGTAGCCTTGTTTATATTTAAAGTCACTAGCAATGTCCCTTaGTGTCTTGGCCAGCTGGACAGAAATCGCATCAACAGGGAGATC +
Preference number: 5 (lower is better)
Translates to: FPVALFIFKVTSNVP*CLGQLDRNRINREI
Trigger: GATCTCCCTGTTGATGCGATTTCTGTCCAGCTGGCCAAGACATCAAGGGACATTGCTAGTGACTTTAAATATAAACAAGGCTACCGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp CTCCTGGGCAGTGTGCAGCAGTGGGGTTTCTGTAAGGGTATACTTTaGCTTGATGGCATTCCAATCTTTGCGATATTTAATATCATCTCG +
Preference number: 5 (lower is better)
Translates to: LLGSVQQWGFCKGIL*LDGIPIFAIFNIIS
Trigger: CGAGATGATATTAAATATCGCAAAGATTGGAATGCCATCAAGTCAAAGTATACCCTTACAGAAACCCCACTGCTGCACACTGCCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp AGTCGGATTTGTATAGATTATCACTCTGGATTTGCATGGCATTCCTaGAGTGTTCCACATTCAAGGCATCAGGCAAGAGGGTGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: SRICIDYHSGFAWHS*SVPHSRHQARGCSC
Trigger: ACAACTACACCCTCTTGCCTGATGCCTTGAATGTGGAACACTCCAGGAATGCCATGCAAATCCAGAGTGATAATCTATACAAATCCGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp CCAGCACGTGGTTCATCATGTCATTGGGAATATGCACATTTGCTTTaGTGTCTTCATAATCTCTTCTGTAGTTCAACGCACTCCGCATCT +
Preference number: 5 (lower is better)
Translates to: PARGSSCHWEYAHLL*CLHNLFCSSTHSAS
Trigger: AGATGCGGAGTGCGTTGAACTACAGAAGAGATTATGAAGACACCAAAGCAAATGTGCATATTCCCAATGACATGATGAACCACGTGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp CACCTCACTGGCATTAATGCCACTCTGAAGAGCAGTCACGTAAACTaGCGTATCTGTGACCAGGTTATAGTTCTGCAGATTTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: HLTGINATLKSSHVN*RICDQVIVLQIFFT
Trigger: AGTAAAGAAAATCTGCAGAACTATAACCTGGTCACAGATACGCCAGTTTACGTGACTGCTCTTCAGAGTGGCATTAATGCCAGTGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAACTCTTATCACTGTTTaGAGCAGAAACCTTCATGCA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGTLITV*SRNLHA
Trigger: TGCATGAAGGTTTCTGCTCAAAACAGTGATAAGAGT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGACTCTTATCACTGTTTaGAGCAGAAACCTTCATGCA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVTLITV*SRNLHA
Trigger: TGCATGAAGGTTTCTGCTCAAAACAGTGATAAGAGT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCACTGGTCCAACTTCTaGATAGATTCATATTCTTGG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVHWSNF*IDSYSW
Trigger: CCAAGAATATGAATCTATCAAGAAGTTGGACCAGTG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGACACTGGTCCAACTTCTaGATAGATTCATATTCTTGG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGHWSNF*IDSYSW
Trigger: CCAAGAATATGAATCTATCAAGAAGTTGGACCAGTG...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCTGTGTAGATCGTTTTaGACTTTTCATAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLCRSF*TFHSPS
Trigger: GGAAGGACTATGAAAAGTCAAAAACGATCTACACAG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGGATTGTTCATAGGCTaGCTTGTACTTGTAATCACT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVGLFIG*LVLVIT
Trigger: AGTGATTACAAGTACAAGCAAGCCTATGAACAATCC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTGATTCTGCTTGGCTaGCAAAATATCTGGTGTATC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVLILLG*QNIWCI
Trigger: GATACACCAGATATTTTGCAAGCCAAGCAGAATCAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTTTGGCTACATTCATaGATAGCACAAGCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFWLHS*IAQALG
Trigger: ACCCAAAGCTTGTGCTATCAATGAATGTAGCCAAAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTTGGCTACATTCATaGATAGCACAAGCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFWLHS*IAQALG
Trigger: ACCCAAAGCTTGTGCTATCAATGAATGTAGCCAAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAAGCCTTCTTTGTATTaGTATTCACTGGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVKPSLY*YSLAIS
Trigger: GGAGATTGCCAGTGAATACAAATACAAAGAAGGCTT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTCGGAAGCCTTCTTaGTATTTGTATTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFRKPS*YLYSLA
Trigger: TGCCAGTGAATACAAATACAAAGAAGGCTTCCGAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTTCGGAAGCCTTCTTaGTATTTGTATTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFRKPS*YLYSLA
Trigger: TGCCAGTGAATACAAATACAAAGAAGGCTTCCGAAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTGTGTACAAACGCTaGTTCATAGTGATGGCATTA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSVYKR*FIVMAL
Trigger: TAATGCCATCACTATGAACAAGCGTTTGTACACAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTGTGTACAAACGCTaGTTCATAGTGATGGCATTA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSVYKR*FIVMAL
Trigger: TAATGCCATCACTATGAACAAGCGTTTGTACACAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGTCCCGGGAAGCCTaGGCAGCCACAATGGGAATG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMSREA*AATMGM
Trigger: CATTCCCATTGTGGCTGCCAAGGCTTCCCGGGACAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGGTCACTCTGCACTTaGGCAATGTGGAGGGACCAC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRSLCT*AMWRDH
Trigger: GTGGTCCCTCCACATTGCCAAAGTGCAGAGTGACCG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAAGGGAAGGCTGATATaGGTTTTATCCTTATTCCAG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRKGRLI*VLSLFQ
Trigger: CTGGAATAAGGATAAAACCAATATCAGCCTTCCCTT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAAGGGAAGGCTGATATaGGTTTTATCCTTATTCCAG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGKGRLI*VLSLFQ
Trigger: CTGGAATAAGGATAAAACCAATATCAGCCTTCCCTT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACGGGGCTCTGGAACTaGGTCTTCCATTTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQATGLWN*VFHLAH
Trigger: GTGGGCCAAATGGAAGACCAAGTTCCAGAGCCCCGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGAGGGTATACTTTGACTaGATGGCATTCCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRVYFD*MAFQSL
Trigger: CAAAGATTGGAATGCCATCAAGTCAAAGTATACCCT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAAGGGTATACTTTGACTaGATGGCATTCCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGRVYFD*MAFQSL
Trigger: CAAAGATTGGAATGCCATCAAGTCAAAGTATACCCT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAAGGGTATACTTTGACTaGATGGCATTCCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRVYFD*MAFQSL
Trigger: CAAAGATTGGAATGCCATCAAGTCAAAGTATACCCT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGATGTCAGCAGGGATATaGATTTTGGCCTTTGACTTA +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVMSAGI*ILAFDL
Trigger: TAAGTCAAAGGCCAAAATCAATATCCCTGCTGACAT...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTGACTGAGTTAATCTaGGCTAGAACAATCTCTGGA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLTELI*ARTISG
Trigger: TCCAGAGATTGTTCTAGCCAAGATTAACTCAGTCAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGGGAATATGCACATTaGCTTTGGTGTCTTCATAAT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYWEYAH*LWCLHN
Trigger: ATTATGAAGACACCAAAGCAAATGTGCATATTCCCA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATGGTTCATCATGTCATaGGGAATATGCACATTTGCT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGWFIMS*GICTFA
Trigger: AGCAAATGTGCATATTCCCAATGACATGATGAACCA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGTTCATCATGTCATaGGGAATATGCACATTTGCT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWFIMS*GICTFA
Trigger: AGCAAATGTGCATATTCCCAATGACATGATGAACCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGTTCATCATGTCATaGGGAATATGCACATTTGCT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWFIMS*GICTFA
Trigger: AGCAAATGTGCATATTCCCAATGACATGATGAACCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGCAGATTTTCTTTACTaGCTGCTGTGTATTGTAGCT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGADFLY*LLCIVA
Trigger: AGCTACAATACACAGCAGCAAGTAAAGAAAATCTGC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGGCAGATTTTCTTTACTaGCTGCTGTGTATTGTAGCT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVADFLY*LLCIVA
Trigger: AGCTACAATACACAGCAGCAAGTAAAGAAAATCTGC...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGGTCGATGTTAAGTTaGCCCACTCGGAGACACCGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRSMLS*PTRRHR
Trigger: GCGGTGTCTCCGAGTGGGCAAACTTAACATCGACCG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTAGTTGGGGCCACTTaGCCTCTGACACTGTGCACG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVVGAT*PLTLCT
Trigger: CGTGCACAGTGTCAGAGGCAAAGTGGCCCCAACTAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACATCTGCAGATCCTCTTaGTATTTAATATCACTCGTG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYICRSS*YLISLV
Trigger: CACGAGTGATATTAAATACAAAGAGGATCTGCAGAT...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACCAGTCAGCAACATACTaGAAGTTTGACTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYQSATY*KFDFVL
Trigger: AAGAACAAAGTCAAACTTCAAGTATGTTGCTGACTG...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTCCAGTATGCTTTATaGGCTTCGTACTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFQYAL*ASYCFL
Trigger: CAAGAAACAGTACGAAGCCAATAAAGCATACTGGAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTTACGTGTTTCTCTTaGTATTTCAGATCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFTCFS*YFRSLS
Trigger: AGAGAGCGATCTGAAATACAAAGAGAAACACGTAAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCCATGGCTGCCTTCCTaGCGATGCTTGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIPWLPS*RCLALY
Trigger: GTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATGG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACCTGGCTGCTCAGCTaGGCTGCCTTCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITWLLS*AAFLAI
Trigger: AATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTGTATTTGGGTGTTTaGCCCTTCTCCTTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRLYLGV*PFSLSK
Trigger: TTTTGACAAGGAGAAGGGCAAAACACCCAAATACAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTGTATTTGGGTGTTTaGCCCTTCTCCTTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGLYLGV*PFSLSK
Trigger: TTTTGACAAGGAGAAGGGCAAAACACCCAAATACAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATATACTCTTTCTCGCTaGCTATTTTGGTTGCATGTC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYTLSR*LFWLHV
Trigger: GACATGCAACCAAAATAGCAAGCGAGAAAGAGTATA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATATTTCTGGCGTGTCTaGAACAACTGTAATTTTCCC +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGYFWRV*NNCNFP
Trigger: GGGAAAATTACAGTTGTTCAAGACACGCCAGAAATA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTATTTCTGGCGTGTCTaGAACAACTGTAATTTTCCC +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVYFWRV*NNCNFP
Trigger: GGGAAAATTACAGTTGTTCAAGACACGCCAGAAATA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGCGAGCTGAAATTCTTTaGGTTTTCTTTAACACGCAG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVRAEIL*VFFNTQ
Trigger: CTGCGTGTTAAAGAAAACCAAAAGAATTTCAGCTCG...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGCTTCTGGGTCTCCTaGACGCGTTTCACTTCGGGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICFWVS*TRFTSG
Trigger: GCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp AGCCCTGGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTTTCTCATGTTCTCTTaGTACAATACCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: SPGVLKSPLKCCLQSCRYFLMFS*YNTELK
Trigger: CTTTAGCTCGGTATTGTACAAAGAGAACATGAGAAA...GTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACGAGCTAAGGTTTTCTaGATTGAGTTTTACTCTCTG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRRAKVF*IEFYSL
Trigger: CAGAGAGTAAAACTCAATCAAGAAAACCTTAGCTCG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATCTTCTCCTTTAGCTTaGTATAAGATATCACTGGCT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRSSPLA*YKISLA
Trigger: AGCCAGTGATATCTTATACAAAGCTAAAGGAGAAGA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTTCCTGGGACTTCTaGGCTGCCACCACACTGAAC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITSWDF*AATTLN
Trigger: GTTCAGTGTGGTGGCAGCCAAGAAGTCCCAGGAAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAGTCAGCCTCCCATGCTaGTTTATAGAGATTTTTATT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRVSLPC*FIEIFI
Trigger: AATAAAAATCTCTATAAACAAGCATGGGAGGCTGAC...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGTCAGCCTCCCATGCTaGTTTATAGAGATTTTTATT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGVSLPC*FIEIFI
Trigger: AATAAAAATCTCTATAAACAAGCATGGGAGGCTGAC...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTTGGTGATGTTGGCTaGCGCATCCTTGGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVGDVG*RILGCC
Trigger: ACAGCAGCCAAGGATGCGCAAGCCAACATCACCAAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATGGGAATATGCACATTaGCTTTGGTGTCTTCATAAT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRWEYAH*LWCLHN
Trigger: ATTATGAAGACACCAAAGCAAATGTGCATATTCCCA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTGGGAATATGCACATTaGCTTTGGTGTCTTCATAAT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVWEYAH*LWCLHN
Trigger: ATTATGAAGACACCAAAGCAAATGTGCATATTCCCA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAATCTGCAGATCCTCTTaGTATTTAATATCACTCGTG +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGICRSS*YLISLV
Trigger: CACGAGTGATATTAAATACAAAGAGGATCTGCAGAT...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGAATCTGCAGATCCTCTTaGTATTTAATATCACTCGTG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRICRSS*YLISLV
Trigger: CACGAGTGATATTAAATACAAAGAGGATCTGCAGAT...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTCTCCCTTTAGTCTTTaGAAATGTTTCTTTGTAGCG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVSPFSL*KCFFVA
Trigger: CGCTACAAAGAAACATTTCAAAAGACTAAAGGGAGA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACAGTCAGCAACATACTaGAAGTTTGACTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRQSATY*KFDFVL
Trigger: AAGAACAAAGTCAAACTTCAAGTATGTTGCTGACTG...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGCTGGAGAGATGACTaGGCCGCCTGGATGAAGTCT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICWRDD*AAWMKS
Trigger: AGACTTCATCCAGGCGGCCAAGTCATCTCTCCAGCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAAAGCTTGCAGCCCTaGAGAAACTCTCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIESLQP*RNSRSS
Trigger: GCTGGACCGAGAGTTTCTCAAGGGCTGCAAGCTTTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAAAGCTTGCAGCCCTaGAGAAACTCTCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAESLQP*RNSRSS
Trigger: GCTGGACCGAGAGTTTCTCAAGGGCTGCAAGCTTTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTTACGTGTTTCTCTTaGTATTTCAGATCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFTCFS*YFRSLS
Trigger: AGAGAGCGATCTGAAATACAAAGAGAAACACGTAAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGATTTACGTGTTTCTCTTaGTATTTCAGATCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: EVSTEMLPAELQILQTDGFTCFS*YFRSLS
Trigger: AGAGAGCGATCTGAAATACAAAGAGAAACACGTAAA...TCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTACGTGTTTCTCTTaGTATTTCAGATCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFTCFS*YFRSLS
Trigger: AGAGAGCGATCTGAAATACAAAGAGAAACACGTAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCCTTCCTTGCGATGCTaGGCTCTGTACTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIPSLRC*ALYSTS
Trigger: TGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAGG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCTTCCTTGCGATGCTaGGCTCTGTACTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPSLRC*ALYSTS
Trigger: TGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GAAATGTTGCCTGCAGAGTTGCAGATACTGCAGACTGATGGAGGTCTTGAAGTGTTTCTCATGTTCTCTTaGTACAATACCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: EMLPAELQILQTDGGLEVFLMFS*YNTELK
Trigger: CTTTAGCTCGGTATTGTACAAAGAGAACATGAGAAA...CACTTCAAGACCTCCATCAGTCTGCAGTATCTGCAACTCTGCAGGCAACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp GGTGTACTGAAGTCTCCACTGAAATGTTGCCTGCAGAGTTGCAGATACTGCAGATTTCTCATGTTCTCTTaGTACAATACCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: GVLKSPLKCCLQSCRYCRFLMFS*YNTELK
Trigger: CTTTAGCTCGGTATTGTACAAAGAGAACATGAGAAA...TCTGCAGTATCTGCAACTCTGCAGGCAACATTTCAGTGGAGACTTCAGTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTCCCGGCTCCGGCGTaGAGCTTGGACATTAATCAT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVPAPA*SLDINH
Trigger: ATGATTAATGTCCAAGCTCAACGCCGGAGCCGGGAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGTAAGGGGGTCCCCTaGCTCAGGTTCTCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGKGVP*LRFSLY
Trigger: GTACAAAGAGAACCTGAGCAAGGGGACCCCCTTACC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp TTGGCCTGGAGAAACTGTGGGAGATCAGGATTCAGAGTATACTTATaGTTCACGTCTTCTCCTTTAGCTTTGTATAAGATATCACTGGCT +
Preference number: 5 (lower is better)
Translates to: LAWRNCGRSGFRVYL*FTSSPLALYKISLA
Trigger: AGCCAGTGATATCTTATACAAAGCTAAAGGAGAAGACGTGAAGCATAAGTATACTCTGAATCCTGATCTCCCACAGTTTCTCCAGGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp ATTCACTATAGCATCTCCATCCTTAAAGGACACTTCATCCGCATCTaGAGCTATATAGTCATATATAGCACGGAAGATTTTCCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: IHYSISILKGHFIRI*SYIVIYSTEDFPGS
Trigger: ACTGCCGGGAAAATCTTCCGTGCTATATATGACTATATAGCTGCAGATGCGGATGAAGTGTCCTTTAAGGATGGAGATGCTATAGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTGTTCTTGACGGCTaGGACAAGTTCAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQACVLDG*DKFRGI
Trigger: GATGCCCCTGAACTTGTCCAAGCCGTCAAGAACACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGATCACTGAGCTGTTaGGTGTTGAGCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRSLSC*VLSWAC
Trigger: GCAAGCCCAGCTCAACACCAAACAGCTCAGTGATCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCTGGCACGCTGCACTaGAATTTCTCACCTTCATGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAGTLH*NFSPSC
Trigger: GCATGAAGGTGAGAAATTCAAGTGCAGCGTGCCAGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTGGTGTTGGTGATGTaGGCTTGCGCATCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILVLVM*ACASLA
Trigger: AGCCAAGGATGCGCAAGCCAACATCACCAACACCAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTGGTGTTGGTGATGTaGGCTTGCGCATCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQALVLVM*ACASLA
Trigger: AGCCAAGGATGCGCAAGCCAACATCACCAACACCAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGCTGGCATATTCCGTaGCTTTCTTGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRWHIP*LSWPSP
Trigger: TGGAGAAGGCCAAGAAAGCAACGGAATATGCCAGCG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTGCTGTACAGACTCTaGAGGTGCTTGGTTCTGTCG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILLYRL*RCLVLS
Trigger: CGACAGAACCAAGCACCTCAAGAGTCTGTACAGCAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTGCTGTACAGACTCTaGAGGTGCTTGGTTCTGTCG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQALLYRL*RCLVLS
Trigger: CGACAGAACCAAGCACCTCAAGAGTCTGTACAGCAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGGACTTCTGCTTCTaGCCTGAGGCTCTGTACACC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMDFCF*PEALYT
Trigger: GGTGTACAGAGCCTCAGGCAAGAAGCAGAAGTCCAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGGGCCAGGTGCTTCTaGACATGGTCCTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIWARCF*TWSLYL
Trigger: CAAGTACAAGGACCATGTCAAGAAGCACCTGGCCCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCACCTCTGGAGGCTCTaGCATGATGGAGTAGTTGGA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHLWRL*HDGVVG
Trigger: TCCAACTACTCCATCATGCAAGAGCCTCCAGAGGTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCAGGTTGTCAGGTATaGTGTGGTAGTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPGCQV*CGSGLC
Trigger: GCAAAGGCCACTACCACACAATACCTGACAACCTGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCCAGGTTGTCAGGTATaGTGTGGTAGTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIPGCQV*CGSGLC
Trigger: GCAAAGGCCACTACCACACAATACCTGACAACCTGG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAAATCTGGAGTCTCGTaGGCCATGGCATTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAKSGVS*AMAFRP
Trigger: AGGCCTGAATGCCATGGCCAACGAGACTCCAGATTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAAATCTGGAGTCTCGTaGGCCATGGCATTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIKSGVS*AMAFRP
Trigger: AGGCCTGAATGCCATGGCCAACGAGACTCCAGATTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGCAGACTTCGGGATaGAATGTTGTCTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVQTSG*NVVFCR
Trigger: CCGGCAGAAGACAACATTCAATCCCGAAGTCTGCAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAATGGCTCACTGATTaGCAGAGCGTTGGTCTTCGC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQWLTD*QSVGLR
Trigger: GCGAAGACCAACGCTCTGCAAATCAGTGAGCCATTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028320.14
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 90 bp AGCTTCTGTATACAAATGCTTGCTCATAGTGATGGCATTACTCTTTaGCAGGACAATTTCTGGGGTGTCTGTAATACATGTGAACTTCAG +
Preference number: 5 (lower is better)
Translates to: SFCIQMLAHSDGITL*QDNFWGVCNTCELQ
Trigger: CTGAAGTTCACATGTATTACAGACACCCCAGAAATTGTCCTGGCAAAGAGTAATGCCATCACTATGAGCAAGCATTTGTATACAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000139672.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCGATGTCCTTGTCGTaGTGGTCTCATAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPMSLS*WSHRLL
Trigger: CAGAAGTCTATGAGACCACAACGACAAGGACATCGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGGGATGGCATCCACCTaGATGTCGAACTTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIGMAST*MSNFLA
Trigger: AGCTAAGAAGTTCGACATCAAGGTGGATGCCATCCC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGGATGGCATCCACCTaGATGTCGAACTTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGMAST*MSNFLA
Trigger: AGCTAAGAAGTTCGACATCAAGGTGGATGCCATCCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATCCACCCAATGCCCTaGAAGAAGCTGTTGTACTCG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIHPMP*KKLLYS
Trigger: CGAGTACAACAGCTTCTTCAAGGGCATTGGGTGGAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGATGGTGTCTGGGTGTaGTCGGTACTTCCTCTCATT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQADGVWV*SVLPLI
Trigger: AATGAGAGGAAGTACCGACAACACCCAGACACCATC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGTCCCTTGATGTCTaGGCCAGCTGGACAGAAATC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMSLDV*ASWTEI
Trigger: GATTTCTGTCCAGCTGGCCAAGACATCAAGGGACAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATCTCTGTGGCCCTCTaGGCTTTGACAACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAISVAL*ALTTSK
Trigger: CTTGGAAGTTGTCAAAGCCAAGAGGGCCACAGAGAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACATGGATGGAGGCTTaGTCAGCATCCCAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQATWMEA*SASQAS
Trigger: AGAAGCTTGGGATGCTGACAAAGCCTCCATCCATGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACATCACAGCTCATCTaGACTTCATCCCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITSQLI*TSSHPS
Trigger: TGAGGGGTGGGATGAAGTCAAGATGAGCTGTGATGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTCTCACTAGTAACGTaGTTGACTCTCCGGACATGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILSLVT*LTLRTW
Trigger: CCATGTCCGGAGAGTCAACAACGTTACTAGTGAGAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTCACTGACAGCTTCTaGTGTCTTCTTGACTTGGCG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILTDSF*CLLDLA
Trigger: CGCCAAGTCAAGAAGACACAAGAAGCTGTCAGTGAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTTCATCCTTCACTTaGCGGACATGCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITSSFT*RTCSSM
Trigger: CATGCTGCTGCATGTCCGCAAAGTGAAGGATGAAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGGCTGTCTTTCGGGTaGTATTTGGGTGTTTTGCCC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIWLSFG*YLGVLP
Trigger: GGGCAAAACACCCAAATACAACCCGAAAGACAGCCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGGCTGTCTTTCGGGTaGTATTTGGGTGTTTTGCCC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAWLSFG*YLGVLP
Trigger: GGGCAAAACACCCAAATACAACCCGAAAGACAGCCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAATGTGGTCCTGCGTTaGCTTCACTCTGAGCATCTC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQANVVLR*LHSEHL
Trigger: GAGATGCTCAGAGTGAAGCAAACGCAGGACCACATT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAATGTGGTCCTGCGTTaGCTTCACTCTGAGCATCTC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSINVVLR*LHSEHL
Trigger: GAGATGCTCAGAGTGAAGCAAACGCAGGACCACATT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp CTCCAGCCTGTTTATTCATTTTATACTCAGGTGTTTCGGTCTGCATaGAGTAGATCTGGTCTTTCATGTTCTCAAAGTCTTCCTGATACT +
Preference number: 5 (lower is better)
Translates to: LQPVYSFYTQVFRSA*SRSGLSCSQSLPDT
Trigger: AGTATCAGGAAGACTTTGAGAACATGAAAGACCAGATCTACTTCATGCAGACCGAAACACCTGAGTATAAAATGAATAAACAGGCTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAACATGGCTGTGTTCTaGACGGCTTGGACAAGTTCA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQANMAVF*TAWTSS
Trigger: TGAACTTGTCCAAGCCGTCAAGAACACAGCCATGTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGTTTGTATTTTACCTaGCTAGCAGCGACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICLYFT*LAATPA
Trigger: GGCTGGAGTCGCTGCTAGCAAGGTAAAATACAAACA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGTTTGTATTTTACCTaGCTAGCAGCGACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQACLYFT*LAATPA
Trigger: GGCTGGAGTCGCTGCTAGCAAGGTAAAATACAAACA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATCGTCTTGGAGACTTaGGAATCCGACCATTTTCCC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAIVLET*ESDHFP
Trigger: GGGAAAATGGTCGGATTCCAAAGTCTCCAAGACGAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGTTTAGGATCGTCTaGGAGACTTTGGAATCCGAC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQFRIV*ETLESD
Trigger: GTCGGATTCCAAAGTCTCCAAGACGATCCTAAACTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAACGTGCTTTCCCTTaGCCTTCTCATAAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQRAFP*PSHKPL
Trigger: AAGAGGCTTATGAGAAGGCAAAGGGAAAGCACGTTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACTGAGAAAGCCAATTaGCTTGCCTCTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQATEKAN*LASGFL
Trigger: GAGAAAGCCAGAGGCAAGCAAATTGGCTTTCTCAGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATTCCAGGTCTGCCTaGTACAGATTATCACTCTGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHSRSA*YRLSLW
Trigger: CCAGAGTGATAATCTGTACAAGGCAGACCTGGAATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATTCCAGGTCTGCCTaGTACAGATTATCACTCTGG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHSRSA*YRLSLW
Trigger: CCAGAGTGATAATCTGTACAAGGCAGACCTGGAATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACATGGATCGTTTTCTaGTCATTGTCCCAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQATWIVF*SLSQAS
Trigger: GGAAGCCTGGGACAATGACAAGAAAACGATCCATGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTGATATTGGCAGAATaGCTCTTGGCCAGCAGGATT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILILAE*LLASRI
Trigger: AATCCTGCTGGCCAAGAGCAATTCTGCCAATATCAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGAGGCCTTGGCACTTTaGATGGAAATAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAEALAL*MEIASS
Trigger: AGAGGATGCTATTTCCATCAAAAGTGCCAAGGCCTC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATCTCCTGGGCATTTTaGACTCTCAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISWAF*TLRTSG
Trigger: TCCTGAAGTCCTGAGAGTCAAAAATGCCCAGGAGAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATCTCCTGGGCATTTTaGACTCTCAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAISWAF*TLRTSG
Trigger: TCCTGAAGTCCTGAGAGTCAAAAATGCCCAGGAGAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTGAATAACATCATTTaGGTCAGGGTGGCACGTCCA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQALNNII*VRVARP
Trigger: TGGACGTGCCACCCTGACCAAAATGATGTTATTCAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCTTGGCTCCAACAATaGGAATATAGCGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIAWLQQ*EYSAHP
Trigger: TGGATGAGCGCTATATTCCAATTGTTGGAGCCAAGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTTGGCTCCAACAATaGGAATATAGCGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAAWLQQ*EYSAHP
Trigger: TGGATGAGCGCTATATTCCAATTGTTGGAGCCAAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAGGTGAGGTCATCCTaGTATACAATGTCGCTGATC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQVRSS*YTMSLI
Trigger: GATCAGCGACATTGTATACAAGGATGACCTCACCTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACAGGTGAGGTCATCCTaGTATACAATGTCGCTGATC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAQVRSS*YTMSLI
Trigger: GATCAGCGACATTGTATACAAGGATGACCTCACCTG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTTGTAGTCATTCCTaGTCTTCTGCACGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAACSHS*SSAREL
Trigger: AAGCTCACGTGCAGAAGACAAGGAATGACTACAAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCTTGTAGTCATTCCTaGTCTTCTGCACGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIACSHS*SSAREL
Trigger: AAGCTCACGTGCAGAAGACAAGGAATGACTACAAGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCACTAGTAACGTTGTaGACTCTCCGGACATGGACA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQASLVTL*TLRTWT
Trigger: TGTCCATGTCCGGAGAGTCAACAACGTTACTAGTGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCACTAGTAACGTTGTaGACTCTCCGGACATGGACA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISLVTL*TLRTWT
Trigger: TGTCCATGTCCGGAGAGTCAACAACGTTACTAGTGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTGTGTCTTCTTGACTaGGCGGATTTCAGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQALCLLD*ADFRCV
Trigger: GACACACCTGAAATCCGCCAAGTCAAGAAGACACAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTTCTTGTGTCTTCTaGACTTGGCGGATTTCAGGT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAASCVF*TWRISG
Trigger: ACCTGAAATCCGCCAAGTCAAGAAGACACAAGAAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCTTCTTGTGTCTTCTaGACTTGGCGGATTTCAGGT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIASCVF*TWRISG
Trigger: ACCTGAAATCCGCCAAGTCAAGAAGACACAAGAAGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTTTCTTGGTTGCGTTaGGCTCTCTCCATGTCTGGA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFSWLR*ALSMSG
Trigger: TCCAGACATGGAGAGAGCCAAACGCAACCAAGAAAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATTCCAGGTCTGACTaGTACACATTATCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHSRSD*YTLSLC
Trigger: GCAGAGCGATAATGTGTACAAGTCAGACCTGGAATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTGCCCATGTTCTCTTaGTATAGCACCGAGCTAAGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILPMFS*YSTELR
Trigger: CCTTAGCTCGGTGCTATACAAAGAGAACATGGGCAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TATAGTACTATAGAGTTTCCCCATGTCTTTGGAGTGGGAGATGTATaGTGTGTCTGGAGAAAATATGTACTTGCCCTTGGCTTTATTAAA +
Preference number: 5 (lower is better)
Translates to: YSTIEFPHVFGVGDV*CVWRKYVLALGFIK
Trigger: TTTAATAAAGCCAAGGGCAAGTACATATTTTCTCCAGACACACCATACATCTCCCACTCCAAAGACATGGGGAAACTCTATAGTACTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp GTTGACTTTGTAGGCATCTTTCGCTGCTTTGATATGAACAGCATCTaGCTTGATGGTGCAGTTAGATTTATTTCTTTGGTAAACTTCCTT +
Preference number: 5 (lower is better)
Translates to: VDFVGIFRCFDMNSI*LDGAVRFISLVNFL
Trigger: AAGGAAGTTTACCAAAGAAATAAATCTAACTGCACCATCAAGCCAGATGCTGTTCATATCAAAGCAGCGAAAGATGCCTACAAAGTCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGTATGGCTGTCCCTTaGCTTTCTCATAGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRMAVP*LSHSSL
Trigger: AAGAGAACTATGAGAAAGCAAAGGGACAGCCATACG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGCTTGTATAAAACCTaGCTGACTTGCTGCGACACT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICLYKT*LTCCDT
Trigger: AGTGTCGCAGCAAGTCAGCAAGGTTTTATACAAGCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGGTTGGTTACTTTCTaGGCAAATTCGACCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAWLVTF*ANSTSG
Trigger: TCCTGAGGTCGAATTTGCCAAGAAAGTAACCAACCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCTCTTCTCCCAGTCTaGTTTGTAGACATTGTCACT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAALLPV*FVDIVT
Trigger: AGTGACAATGTCTACAAACAAGACTGGGAGAAGAGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCTCTTCTCCCAGTCTaGTTTGTAGACATTGTCACT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIALLPV*FVDIVT
Trigger: AGTGACAATGTCTACAAACAAGACTGGGAGAAGAGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTGAGATTTCTTAGCTaGGGTGACTTGGATCATGTC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILRFLS*GDLDHV
Trigger: GACATGATCCAAGTCACCCAAGCTAAGAAATCTCAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGTGCATCATGTTCTaGGATAGCTCCAGGTCCATA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMCIMF*DSSRSI
Trigger: TATGGACCTGGAGCTATCCAAGAACATGATGCACAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGAGTGTGTCCGGATGTaGCCTGTATTTCTTTTCACT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIECVRM*PVFLFT
Trigger: AGTGAAAAGAAATACAGGCAACATCCGGACACACTC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGGACATTGTTGCCTTaGGCTATTAAGTCATGCCAG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQARTLLP*AIKSCQ
Trigger: CTGGCATGACTTAATAGCCAAAGGCAACAATGTCCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTGATTGGCATTCCTaGTGTGCTCAAGACTCAAGG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFDWHS*CAQDSR
Trigger: CCTTGAGTCTTGAGCACACAAGGAATGCCAATCAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTTGATTGGCATTCCTaGTGTGCTCAAGACTCAAGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFDWHS*CAQDSR
Trigger: CCTTGAGTCTTGAGCACACAAGGAATGCCAATCAAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCCTTGAAGAAGCTGTaGTACTCGTCTTTGTACACA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPLKKL*YSSLYT
Trigger: TGTGTACAAAGACGAGTACAACAGCTTCTTCAAGGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGTTCCTTGAACTTTaGGCAGCAACGATGGGAATG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMFLEL*AATMGM
Trigger: CATTCCCATCGTTGCTGCCAAAAGTTCAAGGAACAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGTTCCTTGAACTTTaGGCAGCAACGATGGGAATG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMFLEL*AATMGM
Trigger: CATTCCCATCGTTGCTGCCAAAAGTTCAAGGAACAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATTATCACTCTGGATTaGCATGGCATTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIITLD*HGIPGV
Trigger: CACTCCAGGAATGCCATGCAAATCCAGAGTGATAAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTCAGCTTGTTGCTTTaGTTAAGTGCCTGTTCCATG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVSLLL*LSACSM
Trigger: CATGGAACAGGCACTTAACAAAAGCAACAAGCTGAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTGCTTCCCTTTGGATaGTTCATAGGCTTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVLPFG*FIGLLV
Trigger: TACAAGCAAGCCTATGAACAATCCAAAGGGAAGCAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTGCTTCCCTTTGGATaGTTCATAGGCTTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVLPFG*FIGLLV
Trigger: TACAAGCAAGCCTATGAACAATCCAAAGGGAAGCAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACCAAGACCATGTTCATaGAGTCCATTAGTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAPRPCS*SPLVWS
Trigger: ACTCCACACTAATGGACTCAATGAACATGGTCTTGG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCCAAGACCATGTTCATaGAGTCCATTAGTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIPRPCS*SPLVWS
Trigger: ACTCCACACTAATGGACTCAATGAACATGGTCTTGG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGTGGATTTTTGTCTaGTCAGCCTCCCATGCTTGT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMWIFV*SASHAC
Trigger: ACAAGCATGGGAGGCTGACAAGACAAAAATCCACAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGGAATGGACTAATTaGGGATCATCCTCCAGACTG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMEWTN*GSSSRL
Trigger: CAGTCTGGAGGATGATCCCAAATTAGTCCATTCCAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAATATGGTGTCCCAGTaGTTTCCGGTAGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQANMVSQ*FPVALF
Trigger: AAACAAGGCTACCGGAAACAACTGGGACACCATATT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAATATGGTGTCCCAGTaGTTTCCGGTAGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSINMVSQ*FPVALF
Trigger: AAACAAGGCTACCGGAAACAACTGGGACACCATATT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTGTCGCTCTGCATTTaGGCTACATTCATTGATAGC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQALSLCI*ATFIDS
Trigger: GCTATCAATGAATGTAGCCAAAATGCAGAGCGACAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATTTCTGTCTGGAGGTaGGCGGTATTTCTTCTCACT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISVWR*AVFLLT
Trigger: AGTGAGAAGAAATACCGCCAACCTCCAGACAGAAAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATTCTTGGCCAATACTaGCTCCAGAGAATCAGTCAC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAILGQY*LQRISH
Trigger: GTGACTGATTCTCTGGAGCAAGTATTGGCCAAGAAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATTCTTGGCCAATACTaGCTCCAGAGAATCAGTCAC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIILGQY*LQRISH
Trigger: GTGACTGATTCTCTGGAGCAAGTATTGGCCAAGAAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTGATGGCATTATTCTaGGCCAATACTTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVMALF*ANTCSR
Trigger: TCTGGAGCAAGTATTGGCCAAGAATAATGCCATCAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCACTGGAGATCTGACTaGTACACATTATCACTCTGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHWRSD*YTLSLW
Trigger: CCAGAGTGATAATGTGTACAAGTCAGATCTCCAGTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAAGGTTTGGCATTTCTaGGCCAACACAATACCAAGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIKVWHF*ANTIPS
Trigger: GCTTGGTATTGTGTTGGCCAAGAAATGCCAAACCTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTTATCCTGTTGAGTTaGGCCAGCATGATTTCTGGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFILLS*ASMISG
Trigger: GCCAGAAATCATGCTGGCCAAACTCAACAGGATAAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATAGTCCTTCATCTTaGATTCATCCCATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHSPSS*IHPIPW
Trigger: CCAAGGGATGGGATGAATCAAAGATGAAGGACTATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTCACTGCTCTGTTTaGCTGTCACATAATCCACTC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQASHCSV*LSHNPL
Trigger: GAGTGGATTATGTGACAGCAAAACAGAGCAGTGAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCAAACCAAACCAGCTaGGGATCGTCTCTCATTGTA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQASNQTS*GSSLIV
Trigger: TACAATGAGAGACGATCCCAAGCTGGTTTGGTTTGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCAAACCAAACCAGCTaGGGATCGTCTCTCATTGTA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISNQTS*GSSLIV
Trigger: TACAATGAGAGACGATCCCAAGCTGGTTTGGTTTGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGGTCATATGATTTCTaGGCATGGAGAATCTGGGGT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQARSYDF*AWRIWG
Trigger: ACCCCAGATTCTCCATGCCAAGAAATCATATGACCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTATCCCAGGCCTCTTaGTATATGTTGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQALSQAS*YMLLLY
Trigger: GTACAGCAGCAACATATACAAAGAGGCCTGGGATAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTCATAAGCATGCTTaGCATGGAGAATTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGHKHA*HGEFQE
Trigger: CTCCTGAAATTCTCCATGCAAAGCATGCTTATGACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACATGGTCCTTGTACTaGTTCTCAGACACCAGATTG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQATWSLY*FSDTRL
Trigger: CAATCTGGTGTCTGAGAACAAGTACAAGGACCATGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACATGGTCCTTGTACTaGTTCTCAGACACCAGATTG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITWSLY*FSDTRL
Trigger: CAATCTGGTGTCTGAGAACAAGTACAAGGACCATGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCTTGACATGGTCCTaGTACTTGTTCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFLTWS*YLFSDT
Trigger: GGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGTCAGTCACAGGTTaGTGGAGTTTCTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMSVTG*WSFFRS
Trigger: TGACCTGAAGAAACTCCACAAACCTGTGACTGACAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAAGTCCAGCATGGGCTaGCCTCGTTCTTTTTCATAT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAKSSMG*PRSFSY
Trigger: ATATGAAAAAGAACGAGGCAAGCCCATGCTGGACTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAAGTCCAGCATGGGCTaGCCTCGTTCTTTTTCATAT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIKSSMG*PRSFSY
Trigger: ATATGAAAAAGAACGAGGCAAGCCCATGCTGGACTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATTTCTGCCGATTGCTaGTACTTAATCTGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAISADC*YLIWLA
Trigger: TGCCAGCCAGATTAAGTACAAGCAATCGGCAGAAAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATTTCTGCCGATTGCTaGTACTTAATCTGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISADC*YLIWLA
Trigger: TGCCAGCCAGATTAAGTACAAGCAATCGGCAGAAAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAAGGTCACACTGGTATaGAAGCAGGCTGAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAKVTLV*KQAEVL
Trigger: AAGAACTTCAGCCTGCTTCAATACCAGTGTGACCTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAAGGTCACACTGGTATaGAAGCAGGCTGAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIKVTLV*KQAEVL
Trigger: AAGAACTTCAGCCTGCTTCAATACCAGTGTGACCTT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAGCTTTCCCTTGTATTaGTTTCCGGAAGCTATCGGA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQASFPLY*FPEAIG
Trigger: TCCGATAGCTTCCGGAAACAAATACAAGGGAAAGCT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGCTTTCCCTTGTATTaGTTTCCGGAAGCTATCGGA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISFPLY*FPEAIG
Trigger: TCCGATAGCTTCCGGAAACAAATACAAGGGAAAGCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATAGGCAGCTTTCCCTaGTATTTGTTTCCGGAAGCT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAIGSFP*YLFPEA
Trigger: AGCTTCCGGAAACAAATACAAGGGAAAGCTGCCTAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACCTGTAATGGTATCTaGATCCTGGTCATTCCGCTT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITCNGI*ILVIPL
Trigger: AAGCGGAATGACCAGGATCAAGATACCATTACAGGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACCTGTAATGGTATCTaGATCCTGGTCATTCCGCTT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQATCNGI*ILVIPL
Trigger: AAGCGGAATGACCAGGATCAAGATACCATTACAGGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 90 bp ATTTCAGGTGTGTCTGGGGTTGTATGTATCTTGTCTTTTAGTTTGTaGTACAGTTCTCGATATAGTCTCTCACTAGTAACGTTGTTGACT +
Preference number: 5 (lower is better)
Translates to: ISGVSGVVCILSFSL*YSSRYSLSLVTLLT
Trigger: AGTCAACAACGTTACTAGTGAGAGACTATATCGAGAACTGTATCACAAACTAAAAGACAAGATACATACAACCCCAGACACACCTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 90 bp TTTCTGACTGTAAAGTGTTTGATTCTGCTTGGCTTGCAAAATATCTaGTGTATCCGGCATCACATGAATCTTGGTTTTGTCTTTATTCCA +
Preference number: 5 (lower is better)
Translates to: FLTVKCLILLGLQNI*CIRHHMNLGFVFIP
Trigger: TGGAATAAAGACAAAACCAAGATTCATGTGATGCCGGATACACCAGATATTTTGCAAGCCAAGCAGAATCAAACACTTTACAGTCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATTTTCTGACTGTGTaGAATGTAGGGGGTCATGAA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHFLTV*NVGGHE
Trigger: TTCATGACCCCCTACATTCAACACAGTCAGAAAATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTTAACCTCACTGAGTaGATCCTGGACTTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQALNLTE*ILDFLD
Trigger: ATCAAGAAAGTCCAGGATCAACTCAGTGAGGTTAAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATGCTTGCTCACTTGGTaGGTTACTTTCTTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQACLLTW*VTFLAN
Trigger: ATTTGCCAAGAAAGTAACCAACCAAGTGAGCAAGCA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTGCTTGCTCACTTGGTaGGTTACTTTCTTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSICLLTW*VTFLAN
Trigger: ATTTGCCAAGAAAGTAACCAACCAAGTGAGCAAGCA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAGGAGAGTCTGTGACTaGAGTGAACTTTGTCTTATC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRRVCD*SELCLI
Trigger: GATAAGACAAAGTTCACTCAAGTCACAGACTCTCCT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCAATTGAGGTAAACTaGAGCGTATCTGGATGTTGG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQASIEVN*SVSGCW
Trigger: CCAACATCCAGATACGCTCAAGTTTACCTCAATTGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCAATTGAGGTAAACTaGAGCGTATCTGGATGTTGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISIEVN*SVSGCW
Trigger: CCAACATCCAGATACGCTCAAGTTTACCTCAATTGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTTTCAAGTCAGCCTaGTACATATTCTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQASFKSA*YIFSLM
Trigger: CATCAGCGAGAATATGTACAAGGCTGACTTGAAAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAATCACTTAGCTGCTTaGTGTTCTGCTGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQANHLAA*CSAEPK
Trigger: TTTTGGCTCAGCAGAACACAAAGCAGCTAAGTGATT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTAATCACTTAGCTGCTTaGTGTTCTGCTGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSINHLAA*CSAEPK
Trigger: TTTTGGCTCAGCAGAACACAAAGCAGCTAAGTGATT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCCATAGTCAGCTTGTaGCTTTTGTTAAGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISIVSL*LLLSAC
Trigger: ACAGGCACTTAACAAAAGCAACAAGCTGACTATGGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTGACTGTAAAGTGTTaGATTCTGCTTGGCTTGCAA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQALTVKC*ILLGLQ
Trigger: TTGCAAGCCAAGCAGAATCAAACACTTTACAGTCAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTGACTGTAAAGTGTTaGATTCTGCTTGGCTTGCAA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILTVKC*ILLGLQ
Trigger: TTGCAAGCCAAGCAGAATCAAACACTTTACAGTCAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATAGACCTTTTTAGCTaGGATGACGTCATTCTGGTC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIIDLFS*DDVILV
Trigger: GACCAGAATGACGTCATCCAAGCTAAAAAGGTCTAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATTTCTGAAGCCCGCTaGTTCTTTTCTGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAISEAR*FFSASK
Trigger: TTTGGAAGCAGAAAAGAACAAGCGGGCTTCAGAAAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATTTCTGAAGCCCGCTaGTTCTTTTCTGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISEAR*FFSASK
Trigger: TTTGGAAGCAGAAAAGAACAAGCGGGCTTCAGAAAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATTTCAGTGGCCCGTTaGCATTTTTCCACATCCAAA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISVAR*HFSTSK
Trigger: TTTGGATGTGGAAAAATGCAAACGGGCCACTGAAAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGATTCATCCCATCCCTaGGTATATAGTTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIDSSHP*VYSLWL
Trigger: CAGCCATAAACTATATACCAAGGGATGGGATGAATC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTATTTCAGCTCACTTaGAACATCGCTGGAATGATG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVFQLT*NIAGMM
Trigger: CATCATTCCAGCGATGTTCAAAGTGAGCTGAAATAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTATTTCAGCTCACTTaGAACATCGCTGGAATGATG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVFQLT*NIAGMM
Trigger: CATCATTCCAGCGATGTTCAAAGTGAGCTGAAATAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGTCGTCAACACTTTTaGGTAATGTGTAAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRRQHF*VMCKGL
Trigger: AAGCCCTTTACACATTACCAAAAAGTGTTGACGACG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGTCGGGCACGATGTaGATTTTCATCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMSGTM*IFILFF
Trigger: GAAGAACAAGATGAAAATCAACATCGTGCCCGACAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAGGTGTGTCTGGGGTaGTATGTATCTTGTCTTTTA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQVCLG*YVSCLL
Trigger: TAAAAGACAAGATACATACAACCCCAGACACACCTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGTGTCAAGCACCACTTaGTATTTGTCTCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAVSSTT*YLSLIF
Trigger: GAAGATGAGAGACAAATACAAAGTGGTGCTTGACAC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTACTTTTTCCTGTATTaGATCTGGCTGATCTGGTCG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYFFLY*IWLIWS
Trigger: CGACCAGATCAGCCAGATCAAATACAGGAAAAAGTA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATACTTTTTCCTGTATTaGATCTGGCTGATCTGGTCG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYFFLY*IWLIWS
Trigger: CGACCAGATCAGCCAGATCAAATACAGGAAAAAGTA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACAACCGAGGTGAATTaGTCCTTTGACTTCTCATAC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQATTEVN*SFDFSY
Trigger: GTATGAGAAGTCAAAGGACAAATTCACCTCGGTTGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATATCACTGATTTGCTaGTTGACTTTTGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIISLIC*LTFVVR
Trigger: GCGCACCACAAAAGTCAACAAGCAAATCAGTGATAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATATCACTGATTTGCTaGTTGACTTTTGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAISLIC*LTFVVR
Trigger: GCGCACCACAAAAGTCAACAAGCAAATCAGTGATAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCTCGCTTGCTATTTaGGTTGCATGTCTGACATGT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFSLAI*VACLTC
Trigger: ACATGTCAGACATGCAACCAAAATAGCAAGCGAGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCCATTTCTGCCGATaGCTTGTACTTAATCTGGCT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFHFCR*LVLNLA
Trigger: AGCCAGATTAAGTACAAGCAATCGGCAGAAATGGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCCATTTCTGCCGATaGCTTGTACTTAATCTGGCT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFHFCR*LVLNLA
Trigger: AGCCAGATTAAGTACAAGCAATCGGCAGAAATGGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTCTCTGCATCTTCCTaGTACTTTTTCTGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIFSASS*YFFWLE
Trigger: TTCCAGCCAGAAAAAGTACAAGGAAGATGCAGAGAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACATGATATTTCACTGTaGAGATGTGCCGTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAHDISL*RCAVGF
Trigger: AAACCCAACGGCACATCTCAACAGTGAAATATCATG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGTGTAAAGCAGCCTTaGTGTTTCTCAAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGVKQP*CFSKSS
Trigger: TGAAGACTTTGAGAAACACAAAGGCTGCTTTACACC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCATGTTTGTAAGCTGTaGAAGTTGCAGAGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHVCKL*KLQRRR
Trigger: CCTTCTTCTCTGCAACTTCAACAGCTTACAAACATG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAACTCTTATCACTGTTTaGAGCAGAAACCTTCATGCA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQATLITV*SRNLHA
Trigger: TGCATGAAGGTTTCTGCTCAAAACAGTGATAAGAGT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTACTCTTATCACTGTTTaGAGCAGAAACCTTCATGCA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSITLITV*SRNLHA
Trigger: TGCATGAAGGTTTCTGCTCAAAACAGTGATAAGAGT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCACTGGTCCAACTTCTaGATAGATTCATATTCTTGG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIHWSNF*IDSYSW
Trigger: CCAAGAATATGAATCTATCAAGAAGTTGGACCAGTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACTGTGTAGATCGTTTTaGACTTTTCATAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQALCRSF*TFHSPS
Trigger: GGAAGGACTATGAAAAGTCAAAAACGATCTACACAG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCTGTGTAGATCGTTTTaGACTTTTCATAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILCRSF*TFHSPS
Trigger: GGAAGGACTATGAAAAGTCAAAAACGATCTACACAG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGGATTGTTCATAGGCTaGCTTGTACTTGTAATCACT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAGLFIG*LVLVIT
Trigger: AGTGATTACAAGTACAAGCAAGCCTATGAACAATCC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTGATTCTGCTTGGCTaGCAAAATATCTGGTGTATC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILILLG*QNIWCI
Trigger: GATACACCAGATATTTTGCAAGCCAAGCAGAATCAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTTGGCTACATTCATaGATAGCACAAGCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFWLHS*IAQALG
Trigger: ACCCAAAGCTTGTGCTATCAATGAATGTAGCCAAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTCGGAAGCCTTCTTaGTATTTGTATTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFRKPS*YLYSLA
Trigger: TGCCAGTGAATACAAATACAAAGAAGGCTTCCGAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTGTGTACAAACGCTaGTTCATAGTGATGGCATTA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQASVYKR*FIVMAL
Trigger: TAATGCCATCACTATGAACAAGCGTTTGTACACAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCTGTGTACAAACGCTaGTTCATAGTGATGGCATTA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISVYKR*FIVMAL
Trigger: TAATGCCATCACTATGAACAAGCGTTTGTACACAGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAAAGGGAAGGCTGATATaGGTTTTATCCTTATTCCAG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAKGRLI*VLSLFQ
Trigger: CTGGAATAAGGATAAAACCAATATCAGCCTTCCCTT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036934.12
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAATGTCAGCAGGGATATaGATTTTGGCCTTTGACTTA +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAMSAGI*ILAFDL
Trigger: TAAGTCAAAGGCCAAAATCAATATCCCTGCTGACAT...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATGTCAGCAGGGATATaGATTTTGGCCTTTGACTTA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIMSAGI*ILAFDL
Trigger: TAAGTCAAAGGCCAAAATCAATATCCCTGCTGACAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTGACTGAGTTAATCTaGGCTAGAACAATCTCTGGA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILTELI*ARTISG
Trigger: TCCAGAGATTGTTCTAGCCAAGATTAACTCAGTCAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCAGCAGATTTTCTTTACTaGCTGCTGTGTATTGTAGCT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAADFLY*LLCIVA
Trigger: AGCTACAATACACAGCAGCAAGTAAAGAAAATCTGC...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGCAGATTTTCTTTACTaGCTGCTGTGTATTGTAGCT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIADFLY*LLCIVA
Trigger: AGCTACAATACACAGCAGCAAGTAAAGAAAATCTGC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTCCAGTATGCTTTATaGGCTTCGTACTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFQYAL*ASYCFL
Trigger: CAAGAAACAGTACGAAGCCAATAAAGCATACTGGAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTTGTATTTGGGTGTTTaGCCCTTCTCCTTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSILYLGV*PFSLSK
Trigger: TTTTGACAAGGAGAAGGGCAAAACACCCAAATACAA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATATACTCTTTCTCGCTaGCTATTTTGGTTGCATGTC +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAYTLSR*LFWLHV
Trigger: GACATGCAACCAAAATAGCAAGCGAGAAAGAGTATA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTATACTCTTTCTCGCTaGCTATTTTGGTTGCATGTC +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIYTLSR*LFWLHV
Trigger: GACATGCAACCAAAATAGCAAGCGAGAAAGAGTATA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCACGAGCTGAAATTCTTTaGGTTTTCTTTAACACGCAG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQARAEIL*VFFNTQ
Trigger: CTGCGTGTTAAAGAAAACCAAAAGAATTTCAGCTCG...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCGAGCTAAGGTTTTCTaGATTGAGTTTTACTCTCTG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIRAKVF*IEFYSL
Trigger: CAGAGAGTAAAACTCAATCAAGAAAACCTTAGCTCG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTTCTCCTTTAGCTTaGTATAAGATATCACTGGCT +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQASSPLA*YKISLA
Trigger: AGCCAGTGATATCTTATACAAAGCTAAAGGAGAAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTGTCAGCCTCCCATGCTaGTTTATAGAGATTTTTATT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIVSLPC*FIEIFI
Trigger: AATAAAAATCTCTATAAACAAGCATGGGAGGCTGAC...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTATCTGCAGATCCTCTTaGTATTTAATATCACTCGTG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIICRSS*YLISLV
Trigger: CACGAGTGATATTAAATACAAAGAGGATCTGCAGAT...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATCTCCCTTTAGTCTTTaGAAATGTTTCTTTGTAGCG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQASPFSL*KCFFVA
Trigger: CGCTACAAAGAAACATTTCAAAAGACTAAAGGGAGA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTTCTCCCTTTAGTCTTTaGAAATGTTTCTTTGTAGCG +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSISPFSL*KCFFVA
Trigger: CGCTACAAAGAAACATTTCAAAAGACTAAAGGGAGA...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp TGGGAAGGACTGGTTTGGTTACATAACACTACAGAAGCATTTAACAATTCTATTCAGTCAGCAACATACTaGAAGTTTGACTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: WEGLVWLHNTTEAFNNSIQSATY*KFDFVL
Trigger: AAGAACAAAGTCAAACTTCAAGTATGTTGCTGACTG...AATAGAATTGTTAAATGCTTCTGTAGTGTTATGTAACCAAACCAGTCCTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS-3UTR CAA 90 bp CTTTCTCAACACTTGATATTGACTGTTCATTCTTACAGAAATGAAACGCAAGCATTTCTCATGTTCTCTTaGTACAATACCGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: LSQHLILTVHSYRNETQAFLMFS*YNTELK
Trigger: CTTTAGCTCGGTATTGTACAAAGAGAACATGAGAAA...TGCTTGCGTTTCATTTCTGTAAGAATGAACAGTCAATATCAAGTGTTGAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GGGCGGCCAAGCATGCTTAACCCATGGCTGCCTTCCTaGCGATGCTTGGCTCTGTACTCCACCTCACTGGCC +
Preference number: 6 (lower is better)
Translates to: GRPSMLNPWLPS*RCLALYSTSLA
Trigger: GGCCAGTGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCTTGGCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp CTCGCCCCCACTGATACTCAGTGCACTGGCAGATCTTaGCTGGTCCCGGCTCCGGCGTTGAGCTTGGACATT +
Preference number: 6 (lower is better)
Translates to: LAPTDTQCTGRS*LVPAPALSLDI
Trigger: AATGTCCAAGCTCAACGCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGCACTGAGTATCAGTGGGGGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CTTCTTTCGGATGACCTTCTTCCGCTCCACCGGCTTTaGTGGTTGTGGCTGTGCCAGCGCTGGTGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: LLSDDLLPLHRL*WLWLCQRWCGS
Trigger: ACTGCCACACCAGCGCTGGCACAGCCACAACCAGCAAAGCCGGTGGAGCGGAAGAAGGTCATCCGAAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GGCGGCCAAGCATGCTTAACCCATGGCTGCCTTCCTTaGGATGCTTGGCTCTGTACTCCACCTCACTGGCCT +
Preference number: 6 (lower is better)
Translates to: GGQACLTHGCLP*DAWLCTPPHWP
Trigger: AGGCCAGTGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCTTGGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CTTTCGGATGACCTTCTTCCGCTCCACCGGCTTTGCTaGTTGTGGCTGTGCCAGCGCTGGTGTGGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: LSDDLLPLHRLC*LWLCQRWCGSF
Trigger: GAAACTGCCACACCAGCGCTGGCACAGCCACAACCAGCAAAGCCGGTGGAGCGGAAGAAGGTCATCCGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CCGGCTTTGCTGGTTGTGGCTGTGCCAGCGCTGGTGTaGCAGTTTCTGATTGGCCATAGTCCGATGTCCTTG +
Preference number: 6 (lower is better)
Translates to: PALLVVAVPALV*QFLIGHSPMSL
Trigger: CAAGGACATCGGACTATGGCCAATCAGAAACTGCCACACCAGCGCTGGCACAGCCACAACCAGCAAAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GGTCACTGCCTTGACGTGAACTGTATCCCTGGTCTCTaGCAGGGTCGTATACGAGCCTTGGGCCAGGTGCTT +
Preference number: 6 (lower is better)
Translates to: GHCLDVNCIPGL*QGRIRALGQVL
Trigger: AAGCACCTGGCCCAAGGCTCGTATACGACCCTGCCAGAGACCAGGGATACAGTTCACGTCAAGGCAGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp TCTCGGTCCAGCTTATATTCAAAGTCACTCTGCTGGAGAGATGACTaGGCCGCCTGGATGAAGTCTGGGCGGTCGGGCGTCCACTTCCAG +
Preference number: 6 (lower is better)
Translates to: SRSSLYSKSLCWRDD*AAWMKSGRSGVHFQ
Trigger: CTGGAAGTGGACGCCCGACCGCCCAGACTTCATCCAGGCGGCCAAGTCATCTCTCCAGCAGAGTGACTTTGAATATAAGCTGGACCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp TCAATGTCTGGGCGGCCAAGCATGCTTAACCCATGGCTGCCTTCCTaGCGATGCTTGGCTCTGTACTCCACCTCACTGGCCTGTTTGGCT +
Preference number: 6 (lower is better)
Translates to: SMSGRPSMLNPWLPS*RCLALYSTSLACLA
Trigger: AGCCAAACAGGCCAGTGAGGTGGAGTACAGAGCCAAGCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCTTGGCCGCCCAGACATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp CAGCTTCGGAGTGCTCAGATTTCTCCTCGCCCCCACTaGTACTCAGTGCACTGGCAGATCTTGACTGGTCCC +
Preference number: 6 (lower is better)
Translates to: QLRSAQISPRPH*YSVHWQILTGP
Trigger: GGGACCAGTCAAGATCTGCCAGTGCACTGAGTATCAGTGGGGGCGAGGAGAAATCTGAGCACTCCGAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CTGTATGTGGAAAGGCGCTGGTCCGCAGCTTCGGAGTaGTCAGATTTCTCCTCGCCCCCACTGATACTCAGT +
Preference number: 6 (lower is better)
Translates to: LYVERRWSAASE*SDFSSPPLILS
Trigger: ACTGAGTATCAGTGGGGGCGAGGAGAAATCTGAGCACTCCGAAGCTGCGGACCAGCGCCTTTCCACATACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp AAGAAGGCACCTCCGTCACTGTATGTGGAAAGGCGCTaGTCCGCAGCTTCGGAGTGCTCAGATTTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: KKAPPSLYVERR*SAASECSDFSS
Trigger: CGAGGAGAAATCTGAGCACTCCGAAGCTGCGGACCAGCGCCTTTCCACATACAGTGACGGAGGTGCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp ACTCGTGATGTCTCCCACGTAGCGACAGTGCAACACTaGGGGTGTATACGGCAGGGAGATCATGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: TRDVSHVATVQH*GCIRQGDHVAL
Trigger: CAGGGCCACATGATCTCCCTGCCGTATACACCCCAAGTGTTGCACTGTCGCTACGTGGGAGACATCACGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TGGTTGTGGCTGTGCCAGCGCTGGTGTGGCAGTTTCTaGTTGGCCATAGTCCGATGTCCTTGTCGTTGTGGT +
Preference number: 6 (lower is better)
Translates to: WLWLCQRWCGSF*LAIVRCPCRCG
Trigger: ACCACAACGACAAGGACATCGGACTATGGCCAATCAGAAACTGCCACACCAGCGCTGGCACAGCCACAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp GCCTGTACTCCCTTTCATTCTGAATCTTGCCAGCGATaGGGGCCCACCGGATCTTGTTGTCATCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ACTPFHSESCQR*GPTGSCCHPWL
Trigger: CAGCCAGGGATGACAACAAGATCCGGTGGGCCCTCATCGCTGGCAAGATTCAGAATGAAAGGGAGTACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp CATTTGGCCCACTGCAGCCTGTACTCCCTTTCATTCTaGATCTTGCCAGCGATGAGGGCCCACCGGATCTTG +
Preference number: 6 (lower is better)
Translates to: HLAHCSLYSLSF*ILPAMRAHRIL
Trigger: CAAGATCCGGTGGGCCCTCATCGCTGGCAAGATTCAGAATGAAAGGGAGTACAGGCTGCAGTGGGCCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp GTTTCGGGCGCGGATAACATTGGGCTCCTCGGGAAGTaGCGTCCACTGATGAAAGTAGTGTCGGTACTCCAG +
Preference number: 6 (lower is better)
Translates to: VSGADNIGLLGK*RPLMKVVSVLQ
Trigger: CTGGAGTACCGACACTACTTTCATCAGTGGACGTCACTTCCCGAGGAGCCCAATGTTATCCGCGCCCGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp GTCCAGCTTATATTCAAAGTCACTCTGCTGGAGAGATaGCTTGGCCGCCTGGATGAAGTCTGGGCGGTCGGG +
Preference number: 6 (lower is better)
Translates to: VQLIFKVTLLER*LGRLDEVWAVG
Trigger: CCCGACCGCCCAGACTTCATCCAGGCGGCCAAGTCATCTCTCCAGCAGAGTGACTTTGAATATAAGCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp GCACTGGCAGATCTTGACTGGTCCCGGCTCCGGCGTTaGGCTTGGACATTAATCATGTGCAGACTTCGGGAT +
Preference number: 6 (lower is better)
Translates to: ALADLDWSRLRR*AWTLIMCRLRD
Trigger: ATCCCGAAGTCTGCACATGATTAATGTCCAAGCTCAACGCCGGAGCCGGGACCAGTCAAGATCTGCCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GTTGGTGTTGGTGATGTTGGCTTGCGCATCCTTGGCTaGTGTGACGCTCAGCATGTCGGCAGGAGTATGGTA +
Preference number: 6 (lower is better)
Translates to: VGVGDVGLRILG*CDAQHVGRSMV
Trigger: TACCATACTCCTGCCGACATGCTGAGCGTCACAGCAGCCAAGGATGCGCAAGCCAACATCACCAACACCAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CCTTCTTGGCCATTTCAATGTCTGGGCGGCCAAGCATaGTTAACCCATGGCTGCCTTCCTTGCGATGCTTGG +
Preference number: 6 (lower is better)
Translates to: PSWPFQCLGGQA*LTHGCLPCDAW
Trigger: CCAAGCATCGCAAGGAAGGCAGCCATGGGTTAAGCATGCTTGGCCGCCCAGACATTGAAATGGCCAAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CTGCCCGGTGATGGAAGTGTTCAGGGCGATCAGGGATaGAGCTCCAGATTCCCAGCTGGCTCATGTAGTTTT +
Preference number: 6 (lower is better)
Translates to: LPGDGSVQGDQG*SSRFPAGSCSF
Trigger: AAAACTACATGAGCCAGCTGGGAATCTGGAGCTCCATCCCTGATCGCCCTGAACACTTCCATCACCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GTATCCCTGGTCTCTGGCAGGGTCGTATACGAGCCTTaGGCCAGGTGCTTCTTGACATGGTCCTTGTACTTG +
Preference number: 6 (lower is better)
Translates to: VSLVSGRVVYEP*ARCFLTWSLYL
Trigger: CAAGTACAAGGACCATGTCAAGAAGCACCTGGCCCAAGGCTCGTATACGACCCTGCCAGAGACCAGGGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GTACTTGTGAATGAGGCGCTTGTAGTTGGTGTTGGTGATGTTGGCTaGCGCATCCTTGGCTGCTGTGACGCTCAGCATGTCGGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: VLVNEALVVGVGDVG*RILGCCDAQHVGRS
Trigger: ACTCCTGCCGACATGCTGAGCGTCACAGCAGCCAAGGATGCGCAAGCCAACATCACCAACACCAACTACAAGCGCCTCATTCACAAGTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GCAATGTCGGTAGCATTCCTGGCCCGCATAAAATCTGGAGTCTCGTaGGCCATGGCATTCAGGCCTCTTCCTTTGACTTCCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: AMSVAFLARIKSGVS*AMAFRPLPLTSSSR
Trigger: CCTGGAGCTGGAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAACGAGACTCCAGATTTTATGCGGGCCAGGAATGCTACCGACATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TATCACTTGCAGCCTGTCGGGCAGCTTTGGCGGCTTTaGTGGGGATGGCATCAATTCTCAGGTCATAGCCCT +
Preference number: 6 (lower is better)
Translates to: YHLQPVGQLWRL*WGWHQFSGHSP
Trigger: AGGGCTATGACCTGAGAATTGATGCCATCCCCATCAAAGCCGCCAAAGCTGCCCGACAGGCTGCAAGTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp CCAGGGAGCCGAGGGGGAGCCATCCAATGCCCTTCATaGAGTCGGCATAGTCTGCCTTATACTGATTATCAC +
Preference number: 6 (lower is better)
Translates to: PGSRGGAIQCPS*SRHSLPYTDYH
Trigger: GTGATAATCAGTATAAGGCAGACTATGCCGACTTCATGAAGGGCATTGGATGGCTCCCCCTCGGCTCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp GGACAACTTCGGGTGTGTCCACAATACTTGTGTACTTaGGCTTCACCACGGGGGTCCGGTAGACACTGTCAC +
Preference number: 6 (lower is better)
Translates to: GQLRVCPQYLCT*ASPRGSGRHCH
Trigger: GTGACAGTGTCTACCGGACCCCCGTGGTGAAGCTCAAGTACACAAGTATTGTGGACACACCCGAAGTTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TCCACTGGTGTAGGTATTGACGGTAATCGATGTCACTaGCAAGGTTCTGCCCTTCCTTGGCGGCCACAACCG +
Preference number: 6 (lower is better)
Translates to: STGVGIDGNRCH*QGSALPWRPQP
Trigger: CGGTTGTGGCCGCCAAGGAAGGGCAGAACCTTGTCAGTGACATCGATTACCGTCAATACCTACACCAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TATAGCACGGAAGATTTTCCCGGCAGTAGACGGGTGTaGTGGGATAGAGGACAGTGTTGTCTGCTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: YSTEDFPGSRRV*WDRGQCCLLGG
Trigger: GCCACCCAGCAGACAACACTGTCCTCTATCCCATCACACCCGTCTACTGCCGGGAAAATCTTCCGTGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GAGCTGGGCTTGCAACAGCACGGGAGTGTCGGTGACTaGTGTGAACCTGGTCTTATCAGGATGCACTTTGTA +
Preference number: 6 (lower is better)
Translates to: ELGLQQHGSVGD*CEPGLIRMHFV
Trigger: TACAAAGTGCATCCTGATAAGACCAGGTTCACAGCAGTCACCGACACTCCCGTGCTGTTGCAAGCCCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GCTCTCCTTGTAGAGCCTGTCGTTCTGAATCTGGCCTaGGTGCTCAAACCAAACCAGCTTGGGATCGTCTCT +
Preference number: 6 (lower is better)
Translates to: ALLVEPVVLNLA*VLKPNQLGIVS
Trigger: AGAGACGATCCCAAGCTGGTTTGGTTTGAGCACGCAGGCCAGATTCAGAACGACAGGCTCTACAAGGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TGTAAATCTTCCCTGCGTGCATGGCGCAAAGGATCCTaGGATCATCTTCCACACTCTGGGCTCCGATGTGGT +
Preference number: 6 (lower is better)
Translates to: CKSSLRAWRKGS*DHLPHSGLRCG
Trigger: ACCACATCGGAGCCCAGAGTGTGGAAGATGATCCCAGGATCCTTTGCGCCATGCACGCAGGGAAGATTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000139672.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TGCGGACATGCAGCAGCATGGGTGTGTCATGGATGGTaGTGTAGCCTCTTGGTCTGGCCTTGTTGTATTCCA +
Preference number: 6 (lower is better)
Translates to: CGHAAAWVCHGW*CSLLVWPCCIP
Trigger: TGGAATACAACAAGGCCAGACCAAGAGGCTACACCACCATCCATGACACACCCATGCTGCTGCATGTCCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CACCAGATTGCTGACAGTCTTCGCCAAGAGGATCTGTaGGGTGTCAGGCACAGCATGACAGCTTCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: HQIADSLRQEDL*GVRHSMTASSF
Trigger: GAAAGAGGAAGCTGTCATGCTGTGCCTGACACCCCACAGATCCTCTTGGCGAAGACTGTCAGCAATCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTGGCCGCGGTGATCGGAATAGCATCAGCCAGGACATaGTTGCCTTTGGCTATTAAGTCATGCCAGTCCCGC +
Preference number: 6 (lower is better)
Translates to: LAAVIGIASART*LPLAIKSCQSR
Trigger: GCGGGACTGGCATGACTTAATAGCCAAAGGCAACAATGTCCTGGCTGATGCTATTCCGATCACCGCGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GTCTGGCACACTTGTGAACTTGATGGTGTCTGGGTGTaGTCGGTACTTCCTCTCATTCAGTGCCTCGCCTGC +
Preference number: 6 (lower is better)
Translates to: VWHTCELDGVWV*SVLPLIQCLAC
Trigger: GCAGGCGAGGCACTGAATGAGAGGAAGTACCGACAACACCCAGACACCATCAAGTTCACAAGTGTGCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp AATGAGGCGCTTGTAGTTGGTGTTGGTGATGTTGGCTaGCGCATCCTTGGCTGCTGTGACGCTCAGCATGTC +
Preference number: 6 (lower is better)
Translates to: NEALVVGVGDVG*RILGCCDAQHV
Trigger: GACATGCTGAGCGTCACAGCAGCCAAGGATGCGCAAGCCAACATCACCAACACCAACTACAAGCGCCTCATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TCGTACACTGATCTGTACAGGCGGTCGATGTTAAGTTaGCCCACTCGGAGACACCGCGCTGTGTTTGGATCG +
Preference number: 6 (lower is better)
Translates to: SYTDLYRRSMLS*PTRRHRAVFGS
Trigger: CGATCCAAACACAGCGCGGTGTCTCCGAGTGGGCAAACTTAACATCGACCGCCTGTACAGATCAGTGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GGCAGGGTCGTATACGAGCCTTGGGCCAGGTGCTTCTaGACATGGTCCTTGTACTTGTTCTCAGACACCAGA +
Preference number: 6 (lower is better)
Translates to: GRVVYEPWARCF*TWSLYLFSDTR
Trigger: TCTGGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAAGCACCTGGCCCAAGGCTCGTATACGACCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TGTATCCCTGGTCTCTGGCAGGGTCGTATACGAGCCTaGGGCCAGGTGCTTCTTGACATGGTCCTTGTACTT +
Preference number: 6 (lower is better)
Translates to: CIPGLWQGRIRA*GQVLLDMVLVL
Trigger: AAGTACAAGGACCATGTCAAGAAGCACCTGGCCCAAGGCTCGTATACGACCCTGCCAGAGACCAGGGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp CTGGTCTCTGGCAGGGTCGTATACGAGCCTTGGGCCAGGTGCTTCTaGACATGGTCCTTGTACTTGTTCTCAGACACCAGATTGCTGACA +
Preference number: 6 (lower is better)
Translates to: LVSGRVVYEPWARCF*TWSLYLFSDTRLLT
Trigger: TGTCAGCAATCTGGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAAGCACCTGGCCCAAGGCTCGTATACGACCCTGCCAGAGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TCCACTGATGAAAGTAGTGTCGGTACTCCAGGTCACTaGGGATATACTGGCACCTCTTCGCCAGCACGTGGT +
Preference number: 6 (lower is better)
Translates to: STDESSVGTPGH*GYTGTSSPARG
Trigger: ACCACGTGCTGGCGAAGAGGTGCCAGTATATCCTCAGTGACCTGGAGTACCGACACTACTTTCATCAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp AGTGGTAGACAGCATCACTCAGCTGCTTCCCACTCTTaGCTGCCTGAACGTAAACCGGTGTGTCAGTCACCA +
Preference number: 6 (lower is better)
Translates to: SGRQHHSAASHS*LPERKPVCQSP
Trigger: TGGTGACTGACACACCGGTTTACGTTCAGGCAGTCAAGAGTGGGAAGCAGCTGAGTGATGCTGTCTACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp AGGAAGCGCAGGCCTTTCTTGTACAAATTCTCACTCTaGAGCTTGTATGCATGGAGGGCCCGGTCCAGATCC +
Preference number: 6 (lower is better)
Translates to: RKRRPFLYKFSL*SLYAWRARSRS
Trigger: GGATCTGGACCGGGCCCTCCATGCATACAAGCTTCAGAGTGAGAATTTGTACAAGAAAGGCCTGCGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GCTTTGTATAAGATATCACTGGCTTGCTGCGTGTTCTaGTTTGCCTGCACCATCACCGGGGAGTCCACGATG +
Preference number: 6 (lower is better)
Translates to: ALYKISLACCVF*FACTITGESTM
Trigger: CATCGTGGACTCCCCGGTGATGGTGCAGGCAAAGCAGAACACGCAGCAAGCCAGTGATATCTTATACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp ATTTTCGCGGTATTTAACCTGGCTGCTCAGCTTGGCTaGCTTCTTGGCCATTTCAATGTCTGGGCGGCCAAG +
Preference number: 6 (lower is better)
Translates to: IFAVFNLAAQLG*LLGHFNVWAAK
Trigger: CTTGGCCGCCCAGACATTGAAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGTTAAATACCGCGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CGATGTTCCTTGAACTTTTGGCAGCAACGATGGGAATaGCATCTGGTCTCAAGTCGTAACCCTTGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: RCSLNFWQQRWE*HLVSSRNPWPA
Trigger: CGCTGGCCAAGGGTTACGACTTGAGACCAGATGCCATTCCCATCGTTGCTGCCAAAAGTTCAAGGAACATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GGAATGATGGGCATGAACGAATGGCACAGCATCGGGTaGCAGAATGTAGCCTGTGGCTTTCTGTTTCTCCCA +
Preference number: 6 (lower is better)
Translates to: GMMGMNEWHSIG*QNVACGFLFLP
Trigger: TGGGAGAAACAGAAAGCCACAGGCTACATTCTGCCACCCGATGCTGTGCCATTCGTTCATGCCCATCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp ACTTTGAACATCGCTGGAATGATGGGCATGAACGAATaGCACAGCATCGGGTGGCAGAATGTAGCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: TLNIAGMMGMNE*HSIGWQNVACG
Trigger: GCCACAGGCTACATTCTGCCACCCGATGCTGTGCCATTCGTTCATGCCCATCATTCCAGCGATGTTCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CTTTGCGGACATGCAGCAGCATGGGTGTGTCATGGATaGTGGTGTAGCCTCTTGGTCTGGCCTTGTTGTATT +
Preference number: 6 (lower is better)
Translates to: LCGHAAAWVCHG*WCSLLVWPCCI
Trigger: AATACAACAAGGCCAGACCAAGAGGCTACACCACCATCCATGACACACCCATGCTGCTGCATGTCCGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GTCCACGTCGCTGGCAATCGCCTGAGATTTCTTAGCTaGGGTGACTTGGATCATGTCAAGAGGGGCTGTGTA +
Preference number: 6 (lower is better)
Translates to: VHVAGNRLRFLS*GDLDHVKRGCV
Trigger: TACACAGCCCCTCTTGACATGATCCAAGTCACCCAAGCTAAGAAATCTCAGGCGATTGCCAGCGACGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GTCCACGATGCTGGTGAACTTGAGTGTGTCCGGATGTaGCCTGTATTTCTTTTCACTCAGGGCATCCCCTGC +
Preference number: 6 (lower is better)
Translates to: VHDAGELECVRM*PVFLFTQGIPC
Trigger: GCAGGGGATGCCCTGAGTGAAAAGAAATACAGGCAACATCCGGACACACTCAAGTTCACCAGCATCGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp AGCCACTTCCATGGCGTGCTTCACCTCTGGAGGCTCTaGCATGATGGAGTAGTTGGACTTGCCTTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: SHFHGVLHLWRL*HDGVVGLAFLL
Trigger: AAGGAGAAAGGCAAGTCCAACTACTCCATCATGCAAGAGCCTCCAGAGGTGAAGCACGCCATGGAAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GTAGCATTCCTGGCCCGCATAAAATCTGGAGTCTCGTaGGCCATGGCATTCAGGCCTCTTCCTTTGACTTCC +
Preference number: 6 (lower is better)
Translates to: VAFLARIKSGVS*AMAFRPLPLTS
Trigger: GGAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAACGAGACTCCAGATTTTATGCGGGCCAGGAATGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTGTACATAACCGAGCTAATGTGCTTCTGGGTCTCCTaGACGCGTTTCACTTCGGGCAGGTCAGGGATCGGA +
Preference number: 6 (lower is better)
Translates to: LYITELMCFWVS*TRFTSGRSGIG
Trigger: TCCGATCCCTGACCTGCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTCGGTTATGTACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTGTACAAAACCGAGCTAATGTGCTTCTGGGTCTCCTaGACGCGTTTCACTTCGGGCAGGTCAGGGATCGGA +
Preference number: 6 (lower is better)
Translates to: LYKTELMCFWVS*TRFTSGRSGIG
Trigger: TCCGATCCCTGACCTGCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTCGGTTTTGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135200.2
CDS CAA 90 bp CTCCTTGACGCGTTTCACTTCGGGCAGGTCAGGGATCGGAGTTCCTaGTCCGATTGCTTCTTTATACTTGACCGAGCTAATGTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: LLDAFHFGQVRDRSS*SDCFFILDRANVVL
Trigger: CAGGACCACATTAGCTCGGTCAAGTATAAAGAAGCAATCGGACAAGGAACTCCGATCCCTGACCTGCCCGAAGTGAAACGCGTCAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp AGGTCAGGGGTATCAGGAACTGAAGTGAAGATGGACTTCTGCTTCTaGCCTGAGGCTCTGTACACCAGCTCACTCAGATGCGTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: RSGVSGTEVKMDFCF*PEALYTSSLRCVFS
Trigger: ACTGAAGACGCATCTGAGTGAGCTGGTGTACAGAGCCTCAGGCAAGAAGCAGAAGTCCATCTTCACTTCAGTTCCTGATACCCCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp AAATTTTCGCGGTATTTAACCTGGCTGCTCAGCTTGGCTGCCTTCTaGGCCATTTCAATGTCTGGGCGGCCAAGCATGCTTAACCCATGG +
Preference number: 6 (lower is better)
Translates to: KFSRYLTWLLSLAAF*AISMSGRPSMLNPW
Trigger: CCATGGGTTAAGCATGCTTGGCCGCCCAGACATTGAAATGGCCAAGAAGGCAGCCAAGCTGAGCAGCCAGGTTAAATACCGCGAAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GGGTTTTCTTTGTACATAACCGAGCTAATGTGCTTCTGGGTCTCCTaGACGCGTTTCACTTCGGGCAGGTCAGGGATCGGAGTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: GFSLYITELMCFWVS*TRFTSGRSGIGVPC
Trigger: ACAAGGAACTCCGATCCCTGACCTGCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTCGGTTATGTACAAAGAAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TCTGCAATGCGTAGGCCTTCTTGGCCAGGTCCACATTaGTGCTGTCAGGAGGGTAGCTATAGTTGTGCAAGA +
Preference number: 6 (lower is better)
Translates to: SAMRRPSWPGPH*CCQEGSYSCAR
Trigger: TCTTGCACAACTATAGCTACCCTCCTGACAGCATCAATGTGGACCTGGCCAAGAAGGCCTACGCATTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TTAAACTGGAAGGTGCTGGGATGCTGCCGGTACTTCTaGTCGCTGGCATATTCCGTTGCTTTCTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: LNWKVLGCCRYF*SLAYSVAFLAF
Trigger: GAAGGCCAAGAAAGCAACGGAATATGCCAGCGATCAGAAGTACCGGCAGCATCCCAGCACCTTCCAGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp CATGGTCCTTGTACTTGTTCTCAGACACCAGATTGCTaGCAGTCTTCGCCAAGAGGATCTGTGGGGTGTCAG +
Preference number: 6 (lower is better)
Translates to: HGPCTCSQTPDC*QSSPRGSVGCQ
Trigger: CTGACACCCCACAGATCCTCTTGGCGAAGACTGTCAGCAATCTGGTGTCTGAGAACAAGTACAAGGACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TTTGTATCACTGACGTGCTTGGTCACTGCCTTGACGTaGACTGTATCCCTGGTCTCTGGCAGGGTCGTATAC +
Preference number: 6 (lower is better)
Translates to: FVSLTCLVTALT*TVSLVSGRVVY
Trigger: GTATACGACCCTGCCAGAGACCAGGGATACAGTTCACGTCAAGGCAGTGACCAAGCACGTCAGTGATACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TGGCTCTCAGCATGTCAGGAGTATCTTCCATCTCAGTaGGACCTCTGCCTCGGATGCTTTCTTCCAGGTCTT +
Preference number: 6 (lower is better)
Translates to: WLSACQEYLPSQ*DLCLGCFLPGL
Trigger: AAGACCTGGAAGAAAGCATCCGAGGCAGAGGTCTCACTGAGATGGAAGATACTCCTGACATGCTGAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp AGTTTATCACTGAGGACGTTTCCAGCTGTCTTCAGCTaGCTGAGCAGTGGGTTCTCTGAAGCAGGGAGTACA +
Preference number: 6 (lower is better)
Translates to: SLSLRTFPAVFS*LSSGFSEAGST
Trigger: TGTACTCCCTGCTTCAGAGAACCCACTGCTCAGGCAGCTGAAGACAGCTGGAAACGTCCTCAGTGATAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp TCACTGATTTGCTTGTTGACTTTTGTGGTGCGCAGGTaGTCTGGGGTGTCCACAACCGAGGTGAATTTGTCC +
Preference number: 6 (lower is better)
Translates to: SLICLLTFVVRR*SGVSTTEVNLS
Trigger: GGACAAATTCACCTCGGTTGTGGACACCCCAGAGCACCTGCGCACCACAAAAGTCAACAAGCAAATCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GATGAAGTCTGGGCGGTCGGGCGTCCACTTCCAGTATaGTTTATTGGCTTCGTACTGTTTCTTGTAGTCCAG +
Preference number: 6 (lower is better)
Translates to: DEVWAVGRPLPV*FIGFVLFLVVQ
Trigger: CTGGACTACAAGAAACAGTACGAAGCCAATAAAGCATACTGGAAGTGGACGCCCGACCGCCCAGACTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp TTCGGGCAGGTCAGGGATCGGAGTTCCTTGTCCGATTaGTTCTTTATACTTGACCGAGCTAATGTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: FGQVRDRSSLSD*FFILDRANVVL
Trigger: CAGGACCACATTAGCTCGGTCAAGTATAAAGAAGCAATCGGACAAGGAACTCCGATCCCTGACCTGCCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CTGGCAGGTTGTACTTATGCAGAATTTCCTCCCCCTTaGCTTTGTAAGCAATATCGCTCCTCTGGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: LAGCTYAEFPPP*LCKQYRSSGPG
Trigger: ACCAGGCCCAGAGGAGCGATATTGCTTACAAAGCCAAGGGGGAGGAAATTCTGCATAAGTACAACCTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GTTCACCTTAGCCTGAATGAACTGCGGCAGGTCTGCTaGCAGGTTGTACTTATGCAGAATTTCCTCCCCCTT +
Preference number: 6 (lower is better)
Translates to: VHLSLNELRQVC*QVVLMQNFLPL
Trigger: AAGGGGGAGGAAATTCTGCATAAGTACAACCTGCCAGCAGACCTGCCGCAGTTCATTCAGGCTAAGGTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CATGGAGTCTGGCACACTTGTGAACTTGATGGTGTCTaGGTGTTGTCGGTACTTCCTCTCATTCAGTGCCTC +
Preference number: 6 (lower is better)
Translates to: HGVWHTCELDGV*VLSVLPLIQCL
Trigger: GAGGCACTGAATGAGAGGAAGTACCGACAACACCCAGACACCATCAAGTTCACAAGTGTGCCAGACTCCATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TGTGTTCTGCTGAGCCAAAACCATGCCCATGGAGTCTaGCACACTTGTGAACTTGATGGTGTCTGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: CVLLSQNHAHGV*HTCELDGVWVL
Trigger: CAACACCCAGACACCATCAAGTTCACAAGTGTGCCAGACTCCATGGGCATGGTTTTGGCTCAGCAGAACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GGTGCTGACGGTAAACATGGTCACTCAGGATCTGAGTaGCTCGTTTGTTTTTCTCATCCTCGAGGGAACCAG +
Preference number: 6 (lower is better)
Translates to: GADGKHGHSGSE*LVCFSHPRGNQ
Trigger: CTGGTTCCCTCGAGGATGAGAAAAACAAACGAGCCACTCAGATCCTGAGTGACCATGTTTACCGTCAGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TCTTCTCGGTATTTGATATGGCTGGCCAGGTGCTTCTaGTTCTTGGCATGTGTCAGGGACAAGGTGCTGGTA +
Preference number: 6 (lower is better)
Translates to: SSRYLIWLARCF*FLACVRDKVLV
Trigger: TACCAGCACCTTGTCCCTGACACATGCCAAGAACCAGAAGCACCTGGCCAGCCATATCAAATACCGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GTCGTATACGAGCCTTGGGCCAGGTGCTTCTTGACATaGTCCTTGTACTTGTTCTCAGACACCAGATTGCTG +
Preference number: 6 (lower is better)
Translates to: VVYEPWARCFLT*SLYLFSDTRLL
Trigger: CAGCAATCTGGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAAGCACCTGGCCCAAGGCTCGTATACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CTGCATCTGCTGAGACTCTTTGGCAGTGATGTATGTTaGAGTCTCAAAGTCCAGCATGGGCTTGCCTCGTTC +
Preference number: 6 (lower is better)
Translates to: LHLLRLFGSDVC*SLKVQHGLASF
Trigger: GAACGAGGCAAGCCCATGCTGGACTTTGAGACTCCAACATACATCACTGCCAAAGAGTCTCAGCAGATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp ACTTCCAGCGAGCCGATGGGGATCCACCCAATGCCCTaGAAGAAGCTGTTGTACTCGTCTTTGTACACATTG +
Preference number: 6 (lower is better)
Translates to: TSSEPMGIHPMP*KKLLYSSLYTL
Trigger: CAATGTGTACAAAGACGAGTACAACAGCTTCTTCAAGGGCATTGGGTGGATCCCCATCGGCTCGCTGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TACGAGCCTTGGGCCAGGTGCTTCTTGACATGGTCCTaGTACTTGTTCTCAGACACCAGATTGCTGACAGTC +
Preference number: 6 (lower is better)
Translates to: YEPWARCFLTWS*YLFSDTRLLTV
Trigger: GACTGTCAGCAATCTGGTGTCTGAGAACAAGTACAAGGACCATGTCAAGAAGCACCTGGCCCAAGGCTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GGAGTCTCGTTGGCCATGGCATTCAGGCCTCTTCCTTaGACTTCCAGCTCCAGGTCTCGCTTATATTCTTTC +
Preference number: 6 (lower is better)
Translates to: GVSLAMAFRPLP*TSSSRSRLYSF
Trigger: GAAAGAATATAAGCGAGACCTGGAGCTGGAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAACGAGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp TTTAATATCACTCGTGATGTCTCCCACGTAGCGACAGTGCAACACTaGGGGTGTATACGGCAGGGAGATCATGTGGCCCTGCATCTTGAA +
Preference number: 6 (lower is better)
Translates to: FNITRDVSHVATVQH*GCIRQGDHVALHLE
Trigger: TTCAAGATGCAGGGCCACATGATCTCCCTGCCGTATACACCCCAAGTGTTGCACTGTCGCTACGTGGGAGACATCACGAGTGATATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp CTGCTTCTTAGCCACTTCCATGGCGTGCTTCACCTCTGGAGGCTCTaGCATGATGGAGTAGTTGGACTTGCCTTTCTCCTTGACAAACTT +
Preference number: 6 (lower is better)
Translates to: LLLSHFHGVLHLWRL*HDGVVGLAFLLDKL
Trigger: AAGTTTGTCAAGGAGAAAGGCAAGTCCAACTACTCCATCATGCAAGAGCCTCCAGAGGTGAAGCACGCCATGGAAGTGGCTAAGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GCTGTGGGAGCTGAGTGGTTTTCACATGTTTGTAAGCTGTTGAAGTaGCAGAGAAGAAGGCACCTCCGTCACTGTATGTGGAAAGGCGCT +
Preference number: 6 (lower is better)
Translates to: AVGAEWFSHVCKLLK*QRRRHLRHCMWKGA
Trigger: AGCGCCTTTCCACATACAGTGACGGAGGTGCCTTCTTCTCTGCAACTTCAACAGCTTACAAACATGTGAAAACCACTCAGCTCCCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TATAATGGACCAACTTGGGGTCGTCCTGGAGGCTTCTaGAGCCAACGTGCTTTCCCTTTGCCTTCTCATAAG +
Preference number: 6 (lower is better)
Translates to: YNGPTWGRPGGF*SQRAFPLPSHK
Trigger: CTTATGAGAAGGCAAAGGGAAAGCACGTTGGCTTCAGAAGCCTCCAGGACGACCCCAAGTTGGTCCATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TGGCGGCCACAACCGACACCATGTCAGCAGGGATATTaGTTTTGGCCTTTGACTTATGGTAGCTCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: WRPQPTPCQQGY*FWPLTYGSSPC
Trigger: ACAAGGAGAGCTACCATAAGTCAAAGGCCAAAATCAATATCCCTGCTGACATGGTGTCGGTTGTGGCCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp AATAGCTGCTCATGTAGCGGGTATCCTTGGTGTGATTaGAATGAGGGGTATCAACAGGGAGCCTGTACCCAG +
Preference number: 6 (lower is better)
Translates to: NSCSCSGYPWCD*NEGYQQGACTQ
Trigger: CTGGGTACAGGCTCCCTGTTGATACCCCTCATTTCAATCACACCAAGGATACCCGCTACATGAGCAGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp GAGTCTCGTTGGCCATGGCATTCAGGCCTCTTCCTTTaGCTTCCAGCTCCAGGTCTCGCTTATATTCTTTCT +
Preference number: 6 (lower is better)
Translates to: ESRWPWHSGLFL*LPAPGLAYILS
Trigger: AGAAAGAATATAAGCGAGACCTGGAGCTGGAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAACGAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp AGAGTGCTTGTAGTTGGTATTGCTGATCACATCCTGTaGCTTCTTAGCCGCCACAACGTCGAACATGTCGTG +
Preference number: 6 (lower is better)
Translates to: RVLVVGIADHIL*LLSRHNVEHVV
Trigger: CACGACATGTTCGACGTTGTGGCGGCTAAGAAGGCACAGGATGTGATCAGCAATACCAACTACAAGCACTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CCCGCTTGTAGCAGACGTCACTTATGTTGTAAGCATTaGACTTGGCCTGGAGAAACTGTGGGAGATCAGGAT +
Preference number: 6 (lower is better)
Translates to: PACSRRHLCCKH*TWPGETVGDQD
Trigger: ATCCTGATCTCCCACAGTTTCTCCAGGCCAAGTGCAATGCTTACAACATAAGTGACGTCTGCTACAAGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp TCTCATCCTCGAGGGAACCAGAAGGTATCCAGCCAATaGCTTTCAGCCACTGAAGATCAGCCTTGTACACAT +
Preference number: 6 (lower is better)
Translates to: SHPRGNQKVSSQ*LSATEDQPCTH
Trigger: ATGTGTACAAGGCTGATCTTCAGTGGCTGAAAGGCATTGGCTGGATACCTTCTGGTTCCCTCGAGGATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp TTCTTGCCTGAGGCTCTGTACACCAGCTCACTCAGATaGGTCTTCAGTTCCTGCACTTTTCTGTATTCTGGG +
Preference number: 6 (lower is better)
Translates to: FLPEALYTSSLR*VFSSCTFLYSG
Trigger: CCCAGAATACAGAAAAGTGCAGGAACTGAAGACGCATCTGAGTGAGCTGGTGTACAGAGCCTCAGGCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CTTTTTCCTGTATTTGATCTGGCTGATCTGGTCGCCTaGGGTCTTAGCCAGCAGATGTCTAGGTTCATCGAC +
Preference number: 6 (lower is better)
Translates to: LFPVFDLADLVA*GLSQQMSRFID
Trigger: GTCGATGAACCTAGACATCTGCTGGCTAAGACCGCAGGCGACCAGATCAGCCAGATCAAATACAGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
CDS CCA 72 bp TCCATGGAATATGTGAACTTCAGCTTCTCGGGGTGCTaGCGATACTTTCTCTCACTCAGAATCTCCCCAGCT +
Preference number: 6 (lower is better)
Translates to: SMEYVNFSFSGC*RYFLSLRISPA
Trigger: AGCTGGGGAGATTCTGAGTGAGAGAAAGTATCGCCAGCACCCCGAGAAGCTGAAGTTCACATATTCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp AGTCTCTCACTAGTAACGTTGTTGACTCTCCGGACATaGACAAACGGGACATCCTTGGGTCCAAGTGTGTAC +
Preference number: 6 (lower is better)
Translates to: SLSLVTLLTLRT*TNGTSLGPSVY
Trigger: GTACACACTTGGACCCAAGGATGTCCCGTTTGTCCATGTCCGGAGAGTCAACAACGTTACTAGTGAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CTGGGCGGTCGGGCGTCCACTTCCAGTATGCTTTATTaGCTTCGTACTGTTTCTTGTAGTCCAGATTTGTGT +
Preference number: 6 (lower is better)
Translates to: LGGRASTSSMLY*LRTVSCSPDLC
Trigger: ACACAAATCTGGACTACAAGAAACAGTACGAAGCCAATAAAGCATACTGGAAGTGGACGCCCGACCGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GGGTTTTCTTTGTACATAACCGAGCTAATGTGCTTCTaGGTCTCCTTGACGCGTTTCACTTCGGGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: GFSLYITELMCF*VSLTRFTSGRS
Trigger: TGACCTGCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTCGGTTATGTACAAAGAAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TCAGTGTACAGTTTCTTACTGAACATGGCTGTGTTCTaGACGGCTTGGACAAGTTCAGGGGCATCAGGGGGA +
Preference number: 6 (lower is better)
Translates to: SVYSFLLNMAVF*TAWTSSGASGG
Trigger: TCCCCCTGATGCCCCTGAACTTGTCCAAGCCGTCAAGAACACAGCCATGTTCAGTAAGAAACTGTACACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTGTTGACTCTCCGGACATGGACAAACGGGACATCCTaGGGTCCAAGTGTGTACCCATTTGCCTTGATGTGT +
Preference number: 6 (lower is better)
Translates to: LLTLRTWTNGTS*GPSVYPFALMC
Trigger: ACACATCAAGGCAAATGGGTACACACTTGGACCCAAGGATGTCCCGTTTGTCCATGTCCGGAGAGTCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GCGTTTCACTTCGGGCAGGTCAGGGATCGGAGTTCCTaGTCCGATTGCTTCTTTATACTTGACCGAGCTAAT +
Preference number: 6 (lower is better)
Translates to: AFHFGQVRDRSS*SDCFFILDRAN
Trigger: ATTAGCTCGGTCAAGTATAAAGAAGCAATCGGACAAGGAACTCCGATCCCTGACCTGCCCGAAGTGAAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GGGGTCGTCTTCCAGGCTGCGGAAGCCAATGTGCTTCCCTTTGGATaGTTCATAGGCTTGCTTGTACTTGTAATCACTGGCAATATCTCT +
Preference number: 6 (lower is better)
Translates to: GVVFQAAEANVLPFG*FIGLLVLVITGNIS
Trigger: AGAGATATTGCCAGTGATTACAAGTACAAGCAAGCCTATGAACAATCCAAAGGGAAGCACATTGGCTTCCGCAGCCTGGAAGACGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GGAGGTTGGCGGTATTTCTTCTCACTGATGATTTCTGAAGCCCGCTaGTTCTTTTCTGCTTCCAAAGAACCCAGGGGACTCCATCCTATG +
Preference number: 6 (lower is better)
Translates to: GGWRYFFSLMISEAR*FFSASKEPRGLHPM
Trigger: CATAGGATGGAGTCCCCTGGGTTCTTTGGAAGCAGAAAAGAACAAGCGGGCTTCAGAAATCATCAGTGAGAAGAAATACCGCCAACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp ACATTTTCTTTGTACAAAACCGAGCTAATGTGCTTCTGGGTCTCCTaGACGCGTTTCACTTCGGGCAGGTCAGGGATCGGAGTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: TFSLYKTELMCFWVS*TRFTSGRSGIGVPC
Trigger: ACAAGGAACTCCGATCCCTGACCTGCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTCGGTTTTGTACAAAGAAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135200.2
CDS TCA 72 bp AGGCCTCTTTGTATATGTTGCTGCTGTACAGACTCTTaGGGTGCTTGGTTCTGTCGTAGTCTGCCGTCTCTA +
Preference number: 6 (lower is better)
Translates to: RPLCICCCCTDS*GAWFCRSLPSL
Trigger: TAGAGACGGCAGACTACGACAGAACCAAGCACCTCAAGAGTCTGTACAGCAGCAACATATACAAAGAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GTTATAAGCATTGACTCTGTGCTGGATGAATTCCGGTaGATCTGCTGGCACGCTGCACTTGAATTTCTCACC +
Preference number: 6 (lower is better)
Translates to: VISIDSVLDEFR*ICWHAALEFLT
Trigger: GGTGAGAAATTCAAGTGCAGCGTGCCAGCAGATGCACCGGAATTCATCCAGCACAGAGTCAATGCTTATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp AATGTGATTCATGTTCCTGGTCAGCTCGATGTTCATTaGGTCTGGGAGGAGGATGTACTTGTGAATGAGGCG +
Preference number: 6 (lower is better)
Translates to: NVIHVPGQLDVH*VWEEDVLVNEA
Trigger: CGCCTCATTCACAAGTACATCCTCCTCCCAGACGCAATGAACATCGAGCTGACCAGGAACATGAATCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp TCATATTCTTCTCGGTATTTGATATGGCTGGCCAGGTaGTTCTGGTTCTTGGCATGTGTCAGGGACAAGGTG +
Preference number: 6 (lower is better)
Translates to: SYSSRYLIWLAR*FWFLACVRDKV
Trigger: CACCTTGTCCCTGACACATGCCAAGAACCAGAAGCACCTGGCCAGCCATATCAAATACCGAGAAGAATATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CTTTTTGTAGTTTGTATCACTGACGTGCTTGGTCACTaGCTTGACGTGAACTGTATCCCTGGTCTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: LFVVCITDVLGH*LDVNCIPGLWQ
Trigger: CTGCCAGAGACCAGGGATACAGTTCACGTCAAGGCAGTGACCAAGCACGTCAGTGATACAAACTACAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp ACTAGATTTATATTTCCTCTGGCTGATCTGGTCGCCTaGGGTCTTAGCCAGCAGATGTCTAGGTTCATCGAC +
Preference number: 6 (lower is better)
Translates to: TRFIFPLADLVA*GLSQQMSRFID
Trigger: GTCGATGAACCTAGACATCTGCTGGCTAAGACCGCAGGCGACCAGATCAGCCAGAGGAAATATAAATCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238749.2
CDS CCA 72 bp CGTCTTCCAGGCTGCGGAAGCCAATGTGCTTCCCTTTaGATTGTTCATAGGCTTGCTTGTACTTGTAATCAC +
Preference number: 6 (lower is better)
Translates to: RLPGCGSQCASL*IVHRLACTCNH
Trigger: GTGATTACAAGTACAAGCAAGCCTATGAACAATCCAAAGGGAAGCACATTGGCTTCCGCAGCCTGGAAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp ATTCATGTTCCTGGTCAGCTCGATGTTCATTGCGTCTaGGAGGAGGATGTACTTGTGAATGAGGCGCTTGTA +
Preference number: 6 (lower is better)
Translates to: IHVPGQLDVHCV*EEDVLVNEALV
Trigger: TACAAGCGCCTCATTCACAAGTACATCCTCCTCCCAGACGCAATGAACATCGAGCTGACCAGGAACATGAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CCTGTTGAGTTTGGCCAGCATGATTTCTGGCGTGTCTaGCATGACATGGATCGTTTTCTTGTCATTGTCCCA +
Preference number: 6 (lower is better)
Translates to: PVEFGQHDFWRV*HDMDRFLVIVP
Trigger: TGGGACAATGACAAGAAAACGATCCATGTCATGCCAGACACGCCAGAAATCATGCTGGCCAAACTCAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000139672.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GCTCAGCTTTGTATTTCAGCTCACTTTGAACATCGCTaGAATGATGGGCATGAACGAATGGCACAGCATCGG +
Preference number: 6 (lower is better)
Translates to: AQLCISAHFEHR*NDGHERMAQHR
Trigger: CCGATGCTGTGCCATTCGTTCATGCCCATCATTCCAGCGATGTTCAAAGTGAGCTGAAATACAAAGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CATAGAGATACTGACTCTGAAGCTTCTGTCCTCGCTTaGCTCTTAGAAGGTCAGGGGTATCAGGAACTGAAG +
Preference number: 6 (lower is better)
Translates to: HRDTDSEASVLA*LLEGQGYQELK
Trigger: CTTCAGTTCCTGATACCCCTGACCTTCTAAGAGCCAAGCGAGGACAGAAGCTTCAGAGTCAGTATCTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TATTTCACGATACTCTGCAGCTCTGTGGCTTCTCTGTaGTGTAGCTGTTCCAGGTTGTCAGGTATTGTGTGG +
Preference number: 6 (lower is better)
Translates to: YFTILCSSVASL*CSCSRLSGIVW
Trigger: CCACACAATACCTGACAACCTGGAACAGCTACACCACAGAGAAGCCACAGAGCTGCAGAGTATCGTGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TGTCCGATTGCTTCTTTATACTTGACCGAGCTAATGTaGTCCTGCGTTTGCTTCACTCTGAGCATCTCAGGC +
Preference number: 6 (lower is better)
Translates to: CPIASLYLTELM*SCVCFTLSISG
Trigger: GCCTGAGATGCTCAGAGTGAAGCAAACGCAGGACCACATTAGCTCGGTCAAGTATAAAGAAGCAATCGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTCCAGGCTGCGGAAGCCAATGTGCTTCCCTTTGGATaGTTCATAGGCTTGCTTGTACTTGTAATCACTGGC +
Preference number: 6 (lower is better)
Translates to: FQAAEANVLPFG*FIGLLVLVITG
Trigger: GCCAGTGATTACAAGTACAAGCAAGCCTATGAACAATCCAAAGGGAAGCACATTGGCTTCCGCAGCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp CCCTTGGTATATAGTTTATGGCTGATATTGGCAGAATaGCTCTTGGCCAGCAGGATTTCAGGGGTGTCTGGC +
Preference number: 6 (lower is better)
Translates to: PLVYSLWLILAE*LLASRISGVSG
Trigger: GCCAGACACCCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCAATATCAGCCATAAACTATATACCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000139672.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp ATCTCCACCATGTCGGGCACGATGTTGATTTTCATCTaGTTCTTCTCGTACACTGATCTGTACAGGCGGTCG +
Preference number: 6 (lower is better)
Translates to: ISTMSGTMLIFI*FFSYTDLYRRS
Trigger: CGACCGCCTGTACAGATCAGTGTACGAGAAGAACAAGATGAAAATCAACATCGTGCCCGACATGGTGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTTCTCGCTGACCATGTCCTTCACGTCTTTAGCGTGTaGCAAAGCTGTGGTCTGATTTCCAGCATGGTGATG +
Preference number: 6 (lower is better)
Translates to: FLADHVLHVFSV*QSCGLISSMVM
Trigger: CATCACCATGCTGGAAATCAGACCACAGCTTTGCAACACGCTAAAGACGTGAAGGACATGGTCAGCGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp AAGCAGGCTGAAGTTCTTCTGGTTCTCGCGGACTCTTaGCATCTCTGGCGTGTCCAAGACAGTCTCATAATA +
Preference number: 6 (lower is better)
Translates to: KQAEVLLVLADS*HLWRVQDSLII
Trigger: TATTATGAGACTGTCTTGGACACGCCAGAGATGCAAAGAGTCCGCGAGAACCAGAAGAACTTCAGCCTGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp AACCAGGCTGAAGTTCTTCTGGTTCTCGCGGACTCTTaGCATCTCTGGCGTGTCCAAGACAGTCTCATAATA +
Preference number: 6 (lower is better)
Translates to: NQAEVLLVLADS*HLWRVQDSLII
Trigger: TATTATGAGACTGTCTTGGACACGCCAGAGATGCAAAGAGTCCGCGAGAACCAGAAGAACTTCAGCCTGGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135200.2
CDS CAA 90 bp TTCAGTGTACAGTTTCTTACTGAACATGGCTGTGTTCTTGACGGCTaGGACAAGTTCAGGGGCATCAGGGGGAAGCAGGTACTTATCCTT +
Preference number: 6 (lower is better)
Translates to: FSVQFLTEHGCVLDG*DKFRGIRGKQVLIL
Trigger: AAGGATAAGTACCTGCTTCCCCCTGATGCCCCTGAACTTGTCCAAGCCGTCAAGAACACAGCCATGTTCAGTAAGAAACTGTACACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp CATCCCTTGGTATATAGTTTATGGCTGATATTGGCAGAATTGCTCTaGGCCAGCAGGATTTCAGGGGTGTCTGGCATGACATGGATGGAG +
Preference number: 6 (lower is better)
Translates to: HPLVYSLWLILAELL*ASRISGVSGMTWME
Trigger: CTCCATCCATGTCATGCCAGACACCCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCAATATCAGCCATAAACTATATACCAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000139672.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GCAGTCACCATCTCCACCATGTCGGGCACGATGTTGATTTTCATCTaGTTCTTCTCGTACACTGATCTGTACAGGCGGTCGATGTTAAGT +
Preference number: 6 (lower is better)
Translates to: AVTISTMSGTMLIFI*FFSYTDLYRRSMLS
Trigger: ACTTAACATCGACCGCCTGTACAGATCAGTGTACGAGAAGAACAAGATGAAAATCAACATCGTGCCCGACATGGTGGAGATGGTGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp CTTGTACTTTTTCTCGCTGACCATGTCCTTCACGTCTTTAGCGTGTaGCAAAGCTGTGGTCTGATTTCCAGCATGGTGATGAGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: LVLFLADHVLHVFSV*QSCGLISSMVMRSL
Trigger: GAGAGACCTCATCACCATGCTGGAAATCAGACCACAGCTTTGCAACACGCTAAAGACGTGAAGGACATGGTCAGCGAGAAAAAGTACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp ACCGTTGCTGTGGGAGCTGAGTGGTTTTCACATGTTTGTAAGCTGTaGAAGTTGCAGAGAAGAAGGCACCTCCGTCACTGTATGTGGAAA +
Preference number: 6 (lower is better)
Translates to: TVAVGAEWFSHVCKL*KLQRRRHLRHCMWK
Trigger: TTTCCACATACAGTGACGGAGGTGCCTTCTTCTCTGCAACTTCAACAGCTTACAAACATGTGAAAACCACTCAGCTCCCACAGCAACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp AGGACGTGGTGCATTATCAGAGACTCCTTCATGTCAGTCACAGGTTaGTGGAGTTTCTTCAGGTCAGCCTTATATTTGACCTCGCTTGCA +
Preference number: 6 (lower is better)
Translates to: RTWCIIRDSFMSVTG*WSFFRSALYLTSLA
Trigger: TGCAAGCGAGGTCAAATATAAGGCTGACCTGAAGAAACTCCACAAACCTGTGACTGACATGAAGGAGTCTCTGATAATGCACCACGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp ATAAAATCTGGAGTCTCGTTGGCCATGGCATTCAGGCCTCTTCCTTaGACTTCCAGCTCCAGGTCTCGCTTATATTCTTTCTCATTGAGG +
Preference number: 6 (lower is better)
Translates to: IKSGVSLAMAFRPLP*TSSSRSRLYSFSLR
Trigger: CCTCAATGAGAAAGAATATAAGCGAGACCTGGAGCTGGAAGTCAAAGGAAGAGGCCTGAATGCCATGGCCAACGAGACTCCAGATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp CTTCCCAGCCAGCCTTGTAGAGTTTATCACTCATTGTaGTCTGGTTTACTCTGGAGAGCAAGATGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: LPSQPCRVYHSL*SGLLWRARCLE
Trigger: CTCCAGACATCTTGCTCTCCAGAGTAAACCAGATCACAATGAGTGATAAACTCTACAAGGCTGGCTGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TGGCAGTCACCATCTCCACCATGTCGGGCACGATGTTaGTTTTCATCTTGTTCTTCTCGTACACTGATCTGT +
Preference number: 6 (lower is better)
Translates to: WQSPSPPCRARC*FSSCSSRTLIC
Trigger: ACAGATCAGTGTACGAGAAGAACAAGATGAAAATCAACATCGTGCCCGACATGGTGGAGATGGTGACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp ACAATGTCGCTGATCTGGTCTGTCACTTTTCTGACGTaGCTGTTGACTTGTAAGTCAGGGTGGCAAATCCAC +
Preference number: 6 (lower is better)
Translates to: TMSLIWSVTFLT*LLTCKSGWQIH
Trigger: GTGGATTTGCCACCCTGACTTACAAGTCAACAGTCACGTCAGAAAAGTGACAGACCAGATCAGCGACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TTTCTTGGTTGCGTTTGGCTCTCTCCATGTCTGGAGTaGCAGGCGTTGGTGTTGCTTTTCTCATGTTCTCTT +
Preference number: 6 (lower is better)
Translates to: FLGCVWLSPCLE*QALVLLFSCSL
Trigger: AAGAGAACATGAGAAAAGCAACACCAACGCCTGTCACTCCAGACATGGAGAGAGCCAAACGCAACCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TTGAATGTTGTCTTCTGCCGGATCATAGTCAAAAACTaGACCAGGGTTAGTACGCCAGACACGCAGACCTGT +
Preference number: 6 (lower is better)
Translates to: LNVVFCRIIVKN*TRVSTPDTQTC
Trigger: ACAGGTCTGCGTGTCTGGCGTACTAACCCTGGTTCAGTTTTTGACTATGATCCGGCAGAAGACAACATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GGAAGCAGGTACTTATCCTTGGTGTCTTCCCAGTTCTaGTTGTATAAAACCTTGCTGACTTGCTGCGACACT +
Preference number: 6 (lower is better)
Translates to: GSRYLSLVSSQF*LYKTLLTCCDT
Trigger: AGTGTCGCAGCAAGTCAGCAAGGTTTTATACAAGCAGAACTGGGAAGACACCAAGGATAAGTACCTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CTTTCATACAGTGTGTGTGATACGGGTCCTCAAAGCTaGCCACGTAGTGTCCCAAGATATTCTTTAGGTAGG +
Preference number: 6 (lower is better)
Translates to: LSYSVCDTGPQS*PRSVPRYSLGR
Trigger: CCTACCTAAAGAATATCTTGGGACACTACGTGGGCAGCTTTGAGGACCCGTATCACACACACTGTATGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GAGTTGATCCTGGACTTTCTTGATTCTGCGAAGTTCTaGAGTATCACTTGTGATGGCGTATGGCTGTCCCTT +
Preference number: 6 (lower is better)
Translates to: ELILDFLDSAKF*SITCDGVWLSL
Trigger: AAGGGACAGCCATACGCCATCACAAGTGATACTCCAGAACTTCGCAGAATCAAGAAAGTCCAGGATCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp ACATTTTCTTTGTACAAAACCGAGCTAATGTGCTTCTaGGTCTCCTTGACGCGTTTCACTTCGGGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: TFSLYKTELMCF*VSLTRFTSGRS
Trigger: TGACCTGCCCGAAGTGAAACGCGTCAAGGAGACCCAGAAGCACATTAGCTCGGTTTTGTACAAAGAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135200.2
CDS CAA 72 bp GCTCCAGCCAAGCCCTCGGTACCACTCCCTGTAGTCTaGCTTATATTCATTGTCACTCTGAATGTGATTCAT +
Preference number: 6 (lower is better)
Translates to: APAKPSVPLPVV*LIFIVTLNVIH
Trigger: ATGAATCACATTCAGAGTGACAATGAATATAAGCAAGACTACAGGGAGTGGTACCGAGGGCTTGGCTGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp CGGTATTTCTTCTCACTGATGATTTCTGAAGCCCGCTaGTTCTTTTCTGCTTCCAAAGAACCCAGGGGACTC +
Preference number: 6 (lower is better)
Translates to: RYFFSLMISEAR*FFSASKEPRGL
Trigger: GAGTCCCCTGGGTTCTTTGGAAGCAGAAAAGAACAAGCGGGCTTCAGAAATCATCAGTGAGAAGAAATACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTGGCAGTCACCATCTCCACCATGTCGGGCACGATGTaGATTTTCATCTTGTTCTTCTCGTACACTGATCTG +
Preference number: 6 (lower is better)
Translates to: LAVTISTMSGTM*IFILFFSYTDL
Trigger: CAGATCAGTGTACGAGAAGAACAAGATGAAAATCAACATCGTGCCCGACATGGTGGAGATGGTGACTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TCCTTATATTTCAGATCGCTGACTTCATCCTTCACTTaGCGGACATGCAGCAGCATGGGTGTGTCATGGATG +
Preference number: 6 (lower is better)
Translates to: SLYFRSLTSSFT*RTCSSMGVSWM
Trigger: CATCCATGACACACCCATGCTGCTGCATGTCCGCAAAGTGAAGGATGAAGTCAGCGATCTGAAATATAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp CTTCTCTGTGGTGTAGCTGTTCCAGGTTGTCAGGTATaGTGTGGTAGTGGCCTTTGCTCTTCTCATAGTTCT +
Preference number: 6 (lower is better)
Translates to: LLCGVAVPGCQV*CGSGLCSSHSS
Trigger: AGAACTATGAGAAGAGCAAAGGCCACTACCACACAATACCTGACAACCTGGAACAGCTACACCACAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GCTGAGTGGTTTTCACATGTTTGTAAGCTGTTGAAGTaGCAGAGAAGAAGGCACCTCCGTCACTGTATGTGG +
Preference number: 6 (lower is better)
Translates to: AEWFSHVCKLLK*QRRRHLRHCMW
Trigger: CCACATACAGTGACGGAGGTGCCTTCTTCTCTGCAACTTCAACAGCTTACAAACATGTGAAAACCACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp ATATCTGGACGCAGGATTTCATTACAGCCTTGTTTCAGAAGCATCTaGGCACTAGATTTATATTTCCTCTGGCTGATCTGGTCGCCTGCG +
Preference number: 6 (lower is better)
Translates to: ISGRRISLQPCFRSI*ALDLYFLWLIWSPA
Trigger: CGCAGGCGACCAGATCAGCCAGAGGAAATATAAATCTAGTGCCAAGATGCTTCTGAAACAAGGCTGTAATGAAATCCTGCGTCCAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238749.2
CDS TCA 72 bp TGGAGGTTGGCGGTATTTCTTCTCACTGATGATTTCTaGAGCCCGCTTGTTCTTTTCTGCTTCCAAAGAACC +
Preference number: 6 (lower is better)
Translates to: WRLAVFLLTDDF*SPLVLFCFQRT
Trigger: GGTTCTTTGGAAGCAGAAAAGAACAAGCGGGCTTCAGAAATCATCAGTGAGAAGAAATACCGCCAACCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp AGGTCTTTCCTATACTCTTTCCCACTCTGCATCTGCTaGGACTCTTTGGCAGTGATGTATGTTGGAGTCTCA +
Preference number: 6 (lower is better)
Translates to: RSFLYSFPLCIC*DSLAVMYVGVS
Trigger: TGAGACTCCAACATACATCACTGCCAAAGAGTCTCAGCAGATGCAGAGTGGGAAAGAGTATAGGAAAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135200.2
CDS GCA 72 bp CAAGTCGTAACCCTTGGCCAGCGTTTTCTTCCAGTCTaGTTTGTAATGAGCATCACTCATGTTGATGGCATT +
Preference number: 6 (lower is better)
Translates to: QVVTLGQRFLPV*FVMSITHVDGI
Trigger: AATGCCATCAACATGAGTGATGCTCATTACAAAGCAGACTGGAAGAAAACGCTGGCCAAGGGTTACGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CTCACGGTAGAGTTTATTGCTCACATTAAGAGCGTTTaGTCGAGCGAGATTAATTTCAGGCGTGTCTGGCAT +
Preference number: 6 (lower is better)
Translates to: LTVEFIAHIKSV*SSEINFRRVWH
Trigger: ATGCCAGACACGCCTGAAATTAATCTCGCTCGAGCAAACGCTCTTAATGTGAGCAATAAACTCTACCGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp TCTTTATACTTGACCGAGCTAATGTGGTCCTGCGTTTaGTTCACTCTGAGCATCTCAGGCGTCTTTCCAATT +
Preference number: 6 (lower is better)
Translates to: SLYLTELMWSCV*FTLSISGVFPI
Trigger: AATTGGAAAGACGCCTGAGATGCTCAGAGTGAAGCAAACGCAGGACCACATTAGCTCGGTCAAGTATAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp ATTGCTTCTTTATACTTGACCGAGCTAATGTGGTCCTaGGTTTGCTTCACTCTGAGCATCTCAGGCGTCTTT +
Preference number: 6 (lower is better)
Translates to: IASLYLTELMWS*VCFTLSISGVF
Trigger: AAAGACGCCTGAGATGCTCAGAGTGAAGCAAACGCAGGACCACATTAGCTCGGTCAAGTATAAAGAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp AGGAGAGTCTGTGACTTGAGTGAACTTTGTCTTATCTaGGTGGACTTTGTAGGCGTGATCTTTACACTGGTC +
Preference number: 6 (lower is better)
Translates to: RRVCDLSELCLI*VDFVGVIFTLV
Trigger: GACCAGTGTAAAGATCACGCCTACAAAGTCCACCCAGATAAGACAAAGTTCACTCAAGTCACAGACTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TGTATAGATTATCACTCTGGATTTGCATGGCATTCCTaGAGTGTTCCACATTCAAGGCATCAGGCAAGAGGG +
Preference number: 6 (lower is better)
Translates to: CIDYHSGFAWHS*SVPHSRHQARG
Trigger: CCCTCTTGCCTGATGCCTTGAATGTGGAACACTCCAGGAATGCCATGCAAATCCAGAGTGATAATCTATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TCTGAGCCAAGACCATGTTCATTGAGTCCATTAGTGTaGAGTACTTCAAAGTATCTGGGTGTTGCCGGTACT +
Preference number: 6 (lower is better)
Translates to: SEPRPCSLSPLV*STSKYLGVAGT
Trigger: AGTACCGGCAACACCCAGATACTTTGAAGTACTCCACACTAATGGACTCAATGAACATGGTCTTGGCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TCAGGGATGCTGGTGAACTTATTTCTGTCTGGAGGTTaGCGGTATTTCTTCTCACTGATGATTTCTGAAGCC +
Preference number: 6 (lower is better)
Translates to: SGMLVNLFLSGG*RYFFSLMISEA
Trigger: GGCTTCAGAAATCATCAGTGAGAAGAAATACCGCCAACCTCCAGACAGAAATAAGTTCACCAGCATCCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp AAGTCATCTTTATATACATTATCACTTAAGATCTCCTaGGCGTTTCGGGCGCGGATAACATTGGGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: KSSLYTLSLKIS*AFRARITLGSS
Trigger: CGAGGAGCCCAATGTTATCCGCGCCCGAAACGCCCAGGAGATCTTAAGTGATAATGTATATAAAGATGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp CACTTCTCAGTGTACAGCCTCTTATCCATAGTCAGCTaGTTGCTTTTGTTAAGTGCCTGTTCCATGGTGTCC +
Preference number: 6 (lower is better)
Translates to: HFSVYSLLSIVS*LLLLSACSMVS
Trigger: GGACACCATGGAACAGGCACTTAACAAAAGCAACAAGCTGACTATGGATAAGAGGCTGTACACTGAGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TCATCCCATCCCTTGGTATATAGTTTATGGCTGATATaGGCAGAATTGCTCTTGGCCAGCAGGATTTCAGGG +
Preference number: 6 (lower is better)
Translates to: SSHPLVYSLWLI*AELLLASRISG
Trigger: CCCTGAAATCCTGCTGGCCAAGAGCAATTCTGCCAATATCAGCCATAAACTATATACCAAGGGATGGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000139672.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TACAGTTCTCGATATAGTCTCTCACTAGTAACGTTGTaGACTCTCCGGACATGGACAAACGGGACATCCTTG +
Preference number: 6 (lower is better)
Translates to: YSSRYSLSLVTL*TLRTWTNGTSL
Trigger: CAAGGATGTCCCGTTTGTCCATGTCCGGAGAGTCAACAACGTTACTAGTGAGAGACTATATCGAGAACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GATCAACTCACTGACAGCTTCTTGTGTCTTCTTGACTaGGCGGATTTCAGGTGTGTCTGGGGTTGTATGTAT +
Preference number: 6 (lower is better)
Translates to: DQLTDSFLCLLD*ADFRCVWGCMY
Trigger: ATACATACAACCCCAGACACACCTGAAATCCGCCAAGTCAAGAAGACACAAGAAGCTGTCAGTGAGTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp AGTTCTTCTTGTACTGGTAAGAACTGGCGAGCTGGCTaGTATTTAGGACGTGGTGCATTATCAGAGACTCCT +
Preference number: 6 (lower is better)
Translates to: SSSCTGKNWRAG*YLGRGALSETP
Trigger: AGGAGTCTCTGATAATGCACCACGTCCTAAATACAAGCCAGCTCGCCAGTTCTTACCAGTACAAGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp TCTTCGCCAGCACGTGGTTCATCATGTCATTGGGAATATGCACATTaGCTTTGGTGTCTTCATAATCTCTTCTGTAGTTCAACGCACTCC +
Preference number: 6 (lower is better)
Translates to: SSPARGSSCHWEYAH*LWCLHNLFCSSTHS
Trigger: GGAGTGCGTTGAACTACAGAAGAGATTATGAAGACACCAAAGCAAATGTGCATATTCCCAATGACATGATGAACCACGTGCTGGCGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp AATGTCCAGGGCGTCCTTCACTGTGTGATATCTCCCTTTAGTCTTTaGAAATGTTTCTTTGTAGCGAAGATCACTGGCGTTCCAGTAAGC +
Preference number: 6 (lower is better)
Translates to: NVQGVLHCVISPFSL*KCFFVAKITGVPVS
Trigger: GCTTACTGGAACGCCAGTGATCTTCGCTACAAAGAAACATTTCAAAAGACTAAAGGGAGATATCACACAGTGAAGGACGCCCTGGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp CTTCCAGAGAGAGCTTATAGAGTTTATCGCTCATGTTaGTTGCATTTGCTTTGGCCAAAACGATCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: LPERAYRVYRSC*LHLLWPKRSRG
Trigger: TCCCCGAGATCGTTTTGGCCAAAGCAAATGCAATCAACATGAGCGATAAACTCTATAAGCTCTCTCTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp CTCTGGGGTGTCCACAACCGAGGTGAATTTGTCCTTTaGCTTCTCATACTTTTTCCTGTATTTGATCTGGCT +
Preference number: 6 (lower is better)
Translates to: LWGVHNRGEFVL*LLILFPVFDLA
Trigger: AGCCAGATCAAATACAGGAAAAAGTATGAGAAGTCAAAGGACAAATTCACCTCGGTTGTGGACACCCCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp TCTCAGCTCCGGACTGTCATTATAGGGATAAAACAATaGCTTGTCTGCTTCCCAGTCTTCAGTGTACAGTTT +
Preference number: 6 (lower is better)
Translates to: SQLRTVIIGIKQ*LVCFPVFSVQF
Trigger: AAACTGTACACTGAAGACTGGGAAGCAGACAAGGCATTGTTTTATCCCTATAATGACAGTCCGGAGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000209712.2
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GCTACATTCATTGATAGCACAAGCTTTGGGTCATCTTaGACACTGAGGAATCCAATATGGTGTCCCAGTTGT +
Preference number: 6 (lower is better)
Translates to: ATFIDSTSFGSS*TLRNPIWCPSC
Trigger: ACAACTGGGACACCATATTGGATTCCTCAGTGTGCAAGATGACCCAAAGCTTGTGCTATCAATGAATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GGAGAATCTGGGGTGTGTCCCAAACATAGCAGCCAATaGCCTTCAGCCAATTCAAGTCATCTTTATATACAT +
Preference number: 6 (lower is better)
Translates to: GESGVCPKHSSQ*PSANSSHLYIH
Trigger: ATGTATATAAAGATGACTTGAATTGGCTGAAGGGCATTGGCTGCTATGTTTGGGACACACCCCAGATTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GTGTCATACAGGAAGCAGCCAAGCCCCTTCAAGATCTaGAGATCCTCTTTGTATTTAATATCACTCGTGATG +
Preference number: 6 (lower is better)
Translates to: VSYRKQPSPFKI*RSSLYLISLVM
Trigger: CATCACGAGTGATATTAAATACAAAGAGGATCTGCAGATCTTGAAGGGGCTTGGCTGCTTCCTGTATGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CATGGAGTCCATAAGGCTGGAAAACTTGAATTTATTTaGGTGCTGACGGTAAACATGGTCACTCAGGATCTG +
Preference number: 6 (lower is better)
Translates to: HGVHKAGKLEFI*VLTVNMVTQDL
Trigger: CAGATCCTGAGTGACCATGTTTACCGTCAGCACCCAAATAAATTCAAGTTTTCCAGCCTTATGGACTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CATAGTGATGGCATTACTCTTTGCCAGGACAATTTCTaGGGTGTCTGTAATACATGTGAACTTCAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: HSDGITLCQDNF*GVCNTCELQLV
Trigger: GACCAGCTGAAGTTCACATGTATTACAGACACCCCAGAAATTGTCCTGGCAAAGAGTAATGCCATCACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000139672.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TGTCAAGCACCACTTTGTATTTGTCTCTCATCTTCCTaGCATTATCCGTGTACAGGTAGTTCGACCAGAGTT +
Preference number: 6 (lower is better)
Translates to: CQAPLCICLSSS*HYPCTGSSTRV
Trigger: AACTCTGGTCGAACTACCTGTACACGGATAATGCCAGGAAGATGAGAGACAAATACAAAGTGGTGCTTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CAGATGCGTCTTCAGTTCCTGCACTTTTCTGTATTCTaGGGTGTCAAGCACCACTTTGTATTTGTCTCTCAT +
Preference number: 6 (lower is better)
Translates to: QMRLQFLHFSVF*GVKHHFVFVSH
Trigger: ATGAGAGACAAATACAAAGTGGTGCTTGACACCCCAGAATACAGAAAAGTGCAGGAACTGAAGACGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp CAGCCGATACCTTTCATCCAGTGGGTGAAGTCGGATTaGTATAGATTATCACTCTGGATTTGCATGGCATTC +
Preference number: 6 (lower is better)
Translates to: QPIPFIQWVKSD*YRLSLWICMAF
Trigger: GAATGCCATGCAAATCCAGAGTGATAATCTATACAAATCCGACTTCACCCACTGGATGAAAGGTATCGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTCTCAGTGTACAGCCTCTTATCCATAGTCAGCTTGTaGCTTTTGTTAAGTGCCTGTTCCATGGTGTCCATG +
Preference number: 6 (lower is better)
Translates to: FSVYSLLSIVSL*LLLSACSMVSM
Trigger: CATGGACACCATGGAACAGGCACTTAACAAAAGCAACAAGCTGACTATGGATAAGAGGCTGTACACTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GCTTTGTCAGCATCCCAAGCTTCTGTATACAAATGCTaGCTCATAGTGATGGCATTACTCTTTGCCAGGACA +
Preference number: 6 (lower is better)
Translates to: ALSASQASVYKC*LIVMALLFART
Trigger: TGTCCTGGCAAAGAGTAATGCCATCACTATGAGCAAGCATTTGTATACAGAAGCTTGGGATGCTGACAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000139672.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp CACTTCTCAGTGTACAGCCTCTTATCCATAGTCAGCTTGTTGCTTTaGTTAAGTGCCTGTTCCATGGTGTCCATGGAATATGTGAACTTC +
Preference number: 6 (lower is better)
Translates to: HFSVYSLLSIVSLLL*LSACSMVSMEYVNF
Trigger: GAAGTTCACATATTCCATGGACACCATGGAACAGGCACTTAACAAAAGCAACAAGCTGACTATGGATAAGAGGCTGTACACTGAGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp TTGTTCCACTTCTCAGTGTACAGCCTCTTATCCATAGTCAGCTTGTaGCTTTTGTTAAGTGCCTGTTCCATGGTGTCCATGGAATATGTG +
Preference number: 6 (lower is better)
Translates to: LFHFSVYSLLSIVSL*LLLSACSMVSMEYV
Trigger: CACATATTCCATGGACACCATGGAACAGGCACTTAACAAAAGCAACAAGCTGACTATGGATAAGAGGCTGTACACTGAGAAGTGGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp TGGGCAGTGTGCAGCAGTGGGGTTTCTGTAAGGGTATACTTTGACTaGATGGCATTCCAATCTTTGCGATATTTAATATCATCTCGGATC +
Preference number: 6 (lower is better)
Translates to: WAVCSSGVSVRVYFD*MAFQSLRYLISSRI
Trigger: GATCCGAGATGATATTAAATATCGCAAAGATTGGAATGCCATCAAGTCAAAGTATACCCTTACAGAAACCCCACTGCTGCACACTGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp GTCTTTCATGTTCTCAAAGTCTTCCTGATACTTCCTTaGGCTGAGATTGTCAGCATTCATTCTGGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: VFHVLKVFLILP*AEIVSIHSGCC
Trigger: GCAACAGCCAGAATGAATGCTGACAATCTCAGCTCAAGGAAGTATCAGGAAGACTTTGAGAACATGAAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TTCCAGTCAATAGTGTATAAATGCTTATTCATGGTGTaGGCATTCTGCTTCGCCAGTACCATGTCCATGGAG +
Preference number: 6 (lower is better)
Translates to: FQSIVYKCLFMV*AFCFASTMSME
Trigger: CTCCATGGACATGGTACTGGCGAAGCAGAATGCTCACACCATGAATAAGCATTTATACACTATTGACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp GCCTTGTTTATATTTAAAGTCACTAGCAATGTCCCTTaGTGTCTTGGCCAGCTGGACAGAAATCGCATCAAC +
Preference number: 6 (lower is better)
Translates to: ALFIFKVTSNVP*CLGQLDRNRIN
Trigger: GTTGATGCGATTTCTGTCCAGCTGGCCAAGACATCAAGGGACATTGCTAGTGACTTTAAATATAAACAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GTGAAGTCGGATTTGTATAGATTATCACTCTGGATTTaGATGGCATTCCTGGAGTGTTCCACATTCAAGGCA +
Preference number: 6 (lower is better)
Translates to: VKSDLYRLSLWI*MAFLECSTFKA
Trigger: TGCCTTGAATGTGGAACACTCCAGGAATGCCATGCAAATCCAGAGTGATAATCTATACAAATCCGACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GAGCCATCCAATGCCCTTCATGAAGTCGGCATAGTCTaGCTTATACTGATTATCACTTTGAATCTGCATCAT +
Preference number: 6 (lower is better)
Translates to: EPSNALHEVGIV*LILIITLNLHH
Trigger: ATGATGCAGATTCAAAGTGATAATCAGTATAAGGCAGACTATGCCGACTTCATGAAGGGCATTGGATGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GAGCTTATAGAGTTTATCGCTCATGTTGATTGCATTTaGTTTGGCCAAAACGATCTCGGGGATATCAGGCAT +
Preference number: 6 (lower is better)
Translates to: ELIEFIAHVDCI*FGQNDLGDIRH
Trigger: ATGCCTGATATCCCCGAGATCGTTTTGGCCAAAGCAAATGCAATCAACATGAGCGATAAACTCTATAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CAGAGAGAGCTTATAGAGTTTATCGCTCATGTTGATTaGATTTGCTTTGGCCAAAACGATCTCGGGGATATC +
Preference number: 6 (lower is better)
Translates to: QRELIEFIAHVD*ICFGQNDLGDI
Trigger: GATATCCCCGAGATCGTTTTGGCCAAAGCAAATGCAATCAACATGAGCGATAAACTCTATAAGCTCTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp ACAGAAGTAAAATTGGCCTTTTCCATTTCTGCCGATTaGTTGTACTTAATCTGGCTGGCAATGTCGGTAGCA +
Preference number: 6 (lower is better)
Translates to: TEVKLAFSISAD*LYLIWLAMSVA
Trigger: TGCTACCGACATTGCCAGCCAGATTAAGTACAAGCAATCGGCAGAAATGGAAAAGGCCAATTTTACTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TATGTTGTAAGCATTGCACTTGGCCTGGAGAAACTGTaGGAGATCAGGATTCAGAGTATACTTATGCTTCAC +
Preference number: 6 (lower is better)
Translates to: YVVSIALGLEKL*EIRIQSILMLH
Trigger: GTGAAGCATAAGTATACTCTGAATCCTGATCTCCCACAGTTTCTCCAGGCCAAGTGCAATGCTTACAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp CCACATGTGTGTATTGTAGAGAGCAGTCAACATATCTaGACGCAGGATTTCATTACAGCCTTGTTTCAGAAG +
Preference number: 6 (lower is better)
Translates to: PHVCIVESSQHI*TQDFITALFQK
Trigger: CTTCTGAAACAAGGCTGTAATGAAATCCTGCGTCCAGATATGTTGACTGCTCTCTACAATACACACATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148356.3
ENSMUST00000238749.2
CDS CAA 72 bp GTGTACAGCCTCTTATCCATAGTCAGCTTGTTGCTTTaGTTAAGTGCCTGTTCCATGGTGTCCATGGAATAT +
Preference number: 6 (lower is better)
Translates to: VYSLLSIVSLLL*LSACSMVSMEY
Trigger: ATATTCCATGGACACCATGGAACAGGCACTTAACAAAAGCAACAAGCTGACTATGGATAAGAGGCTGTACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GAAGCCAATGTGCTTCCCTTTGGATTGTTCATAGGCTaGCTTGTACTTGTAATCACTGGCAATATCTCTGGA +
Preference number: 6 (lower is better)
Translates to: EANVLPFGLFIG*LVLVITGNISG
Trigger: TCCAGAGATATTGCCAGTGATTACAAGTACAAGCAAGCCTATGAACAATCCAAAGGGAAGCACATTGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTATATTTAAAGTCACTAGCAATGTCCCTTGATGTCTaGGCCAGCTGGACAGAAATCGCATCAACAGGGAGA +
Preference number: 6 (lower is better)
Translates to: LYLKSLAMSLDV*ASWTEIASTGR
Trigger: TCTCCCTGTTGATGCGATTTCTGTCCAGCTGGCCAAGACATCAAGGGACATTGCTAGTGACTTTAAATATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GGCGTCCTTCACTGTGTGATATCTCCCTTTAGTCTTTaGAAATGTTTCTTTGTAGCGAAGATCACTGGCGTT +
Preference number: 6 (lower is better)
Translates to: GVLHCVISPFSL*KCFFVAKITGV
Trigger: AACGCCAGTGATCTTCGCTACAAAGAAACATTTCAAAAGACTAAAGGGAGATATCACACAGTGAAGGACGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp ATGTCTTTATCGTCAGTGACAGAAAGCTTGCAGCCCTaGAGAAACTCTCGGTCCAGCTTATATTCAAAGTCA +
Preference number: 6 (lower is better)
Translates to: MSLSSVTESLQP*RNSRSSLYSKS
Trigger: TGACTTTGAATATAAGCTGGACCGAGAGTTTCTCAAGGGCTGCAAGCTTTCTGTCACTGACGATAAAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TGCATTATCAGAGACTCCTTCATGTCAGTCACAGGTTaGTGGAGTTTCTTCAGGTCAGCCTTATATTTGACC +
Preference number: 6 (lower is better)
Translates to: CIIRDSFMSVTG*WSFFRSALYLT
Trigger: GGTCAAATATAAGGCTGACCTGAAGAAACTCCACAAACCTGTGACTGACATGAAGGAGTCTCTGATAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp TCTTTGTTCCACTTCTCAGTGTACAGCCTCTTATCCATAGTCAGCTaGTTGCTTTTGTTAAGTGCCTGTTCCATGGTGTCCATGGAATAT +
Preference number: 6 (lower is better)
Translates to: SLFHFSVYSLLSIVS*LLLLSACSMVSMEY
Trigger: ATATTCCATGGACACCATGGAACAGGCACTTAACAAAAGCAACAAGCTGACTATGGATAAGAGGCTGTACACTGAGAAGTGGAACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GTAGAGAGCAGTCAACATATCTGGACGCAGGATTTCATTACAGCCTaGTTTCAGAAGCATCTTGGCACTAGATTTATATTTCCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: VESSQHIWTQDFITA*FQKHLGTRFIFPLA
Trigger: AGCCAGAGGAAATATAAATCTAGTGCCAAGATGCTTCTGAAACAAGGCTGTAATGAAATCCTGCGTCCAGATATGTTGACTGCTCTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238749.2
CDS TCA 72 bp TTGCATCTCTGGCGTGTCCAAGACAGTCTCATAATATaGCATGGACTTCTCTGCATCTTCCTTGTACTTTTT +
Preference number: 6 (lower is better)
Translates to: LHLWRVQDSLII*HGLLCIFLVLF
Trigger: AAAAAGTACAAGGAAGATGCAGAGAAGTCCATGTCATATTATGAGACTGTCTTGGACACGCCAGAGATGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp GTAAGCTCTCTTGGCTCTGATGAGGATTGGTGTGTCTaGAACTGGTGTATACTTGTCTTTCATCTTTTCATA +
Preference number: 6 (lower is better)
Translates to: VSSLGSDEDWCV*NWCILVFHLFI
Trigger: TATGAAAAGATGAAAGACAAGTATACACCAGTTGCAGACACACCAATCCTCATCAGAGCCAAGAGAGCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000148356.3
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp AGAGTATACTTATGCTTCACGTCTTCTCCTTTAGCTTaGTATAAGATATCACTGGCTTGCTGCGTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: RVYLCFTSSPLA*YKISLACCVFC
Trigger: GCAGAACACGCAGCAAGCCAGTGATATCTTATACAAAGCTAAAGGAGAAGACGTGAAGCATAAGTATACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TTGAGCTTGGACATTAATCATGTGCAGACTTCGGGATaGAATGTTGTCTTCTGCCGGATCATAGTCAAAAAC +
Preference number: 6 (lower is better)
Translates to: LSLDINHVQTSG*NVVFCRIIVKN
Trigger: GTTTTTGACTATGATCCGGCAGAAGACAACATTCAATCCCGAAGTCTGCACATGATTAATGTCCAAGCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp CTCTGCATCTTCCTTGTACTTTTTCTGGCTGGAAAGGTTCTTCACTaGCTGAGCATGGATAATTTCTGGGGTATCAACAACAGAAGTAAA +
Preference number: 6 (lower is better)
Translates to: LCIFLVLFLAGKVLH*LSMDNFWGINNRSK
Trigger: TTTACTTCTGTTGTTGATACCCCAGAAATTATCCATGCTCAGCAAGTGAAGAACCTTTCCAGCCAGAAAAAGTACAAGGAAGATGCAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GGGGTTTCTGTAAGGGTATACTTTGACTTGATGGCATTCCAATCTTaGCGATATTTAATATCATCTCGGATCTCACTGCTCTGTTTTGCT +
Preference number: 6 (lower is better)
Translates to: GVSVRVYFDLMAFQS*RYLISSRISLLCFA
Trigger: AGCAAAACAGAGCAGTGAGATCCGAGATGATATTAAATATCGCAAAGATTGGAATGCCATCAAGTCAAAGTATACCCTTACAGAAACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 90 bp GTAGAGAGCAGTCAACATATCTGGACGCAGGATTTCATTACAGCCTaGTTTCAGAAGCATCTTGGCACTAGATTTATATTTCCTCTCATT +
Preference number: 6 (lower is better)
Translates to: VESSQHIWTQDFITA*FQKHLGTRFIFPLI
Trigger: AATGAGAGGAAATATAAATCTAGTGCCAAGATGCTTCTGAAACAAGGCTGTAATGAAATCCTGCGTCCAGATATGTTGACTGCTCTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148356.3
CDS TCA 72 bp AGTGTGCAGCAGTGGGGTTTCTGTAAGGGTATACTTTaGCTTGATGGCATTCCAATCTTTGCGATATTTAAT +
Preference number: 6 (lower is better)
Translates to: SVQQWGFCKGIL*LDGIPIFAIFN
Trigger: ATTAAATATCGCAAAGATTGGAATGCCATCAAGTCAAAGTATACCCTTACAGAAACCCCACTGCTGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp TTGTACTTTTTCTGGCTGGAAAGGTTCTTCACTTGCTaGGCATGGATAATTTCTGGGGTATCAACAACAGAA +
Preference number: 6 (lower is better)
Translates to: LYFFWLERFFTC*AWIISGVSTTE
Trigger: TTCTGTTGTTGATACCCCAGAAATTATCCATGCTCAGCAAGTGAAGAACCTTTCCAGCCAGAAAAAGTACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp ATACAAATGCTTGCTCATAGTGATGGCATTACTCTTTaGCAGGACAATTTCTGGGGTGTCTGTAATACATGT +
Preference number: 6 (lower is better)
Translates to: IQMLAHSDGITL*QDNFWGVCNTC
Trigger: ACATGTATTACAGACACCCCAGAAATTGTCCTGGCAAAGAGTAATGCCATCACTATGAGCAAGCATTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000139672.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp ATCAACAACAGAAGTAAAATTGGCCTTTTCCATTTCTaGCGATTGCTTGTACTTAATCTGGCTGGCAATGTC +
Preference number: 6 (lower is better)
Translates to: INNRSKIGLFHF*RLLVLNLAGNV
Trigger: GACATTGCCAGCCAGATTAAGTACAAGCAATCGGCAGAAATGGAAAAGGCCAATTTTACTTCTGTTGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp AGCATCTCCATCCTTAAAGGACACTTCATCCGCATCTaGAGCTATATAGTCATATATAGCACGGAAGATTTT +
Preference number: 6 (lower is better)
Translates to: SISILKGHFIRI*SYIVIYSTEDF
Trigger: AAAATCTTCCGTGCTATATATGACTATATAGCTGCAGATGCGGATGAAGTGTCCTTTAAGGATGGAGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GTAAAGTGTTTGATTCTGCTTGGCTTGCAAAATATCTaGTGTATCCGGCATCACATGAATCTTGGTTTTGTC +
Preference number: 6 (lower is better)
Translates to: VKCLILLGLQNI*CIRHHMNLGFV
Trigger: GACAAAACCAAGATTCATGTGATGCCGGATACACCAGATATTTTGCAAGCCAAGCAGAATCAAACACTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp GGAAAGGTTCTTCACTTGCTGAGCATGGATAATTTCTaGGGTATCAACAACAGAAGTAAAATTGGCCTTTTC +
Preference number: 6 (lower is better)
Translates to: GKVLHLLSMDNF*GINNRSKIGLF
Trigger: GAAAAGGCCAATTTTACTTCTGTTGTTGATACCCCAGAAATTATCCATGCTCAGCAAGTGAAGAACCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000135200.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GCACGTGGTTCATCATGTCATTGGGAATATGCACATTaGCTTTGGTGTCTTCATAATCTCTTCTGTAGTTCA +
Preference number: 6 (lower is better)
Translates to: ARGSSCHWEYAH*LWCLHNLFCSS
Trigger: TGAACTACAGAAGAGATTATGAAGACACCAAAGCAAATGTGCATATTCCCAATGACATGATGAACCACGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS TCA 72 bp GTGTCTGGGGTTGTATGTATCTTGTCTTTTAGTTTGTaGTACAGTTCTCGATATAGTCTCTCACTAGTAACG +
Preference number: 6 (lower is better)
Translates to: VSGVVCILSFSL*YSSRYSLSLVT
Trigger: CGTTACTAGTGAGAGACTATATCGAGAACTGTATCACAAACTAAAAGACAAGATACATACAACCCCAGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp CACGTGGTTCATCATGTCATTGGGAATATGCACATTTaGTTTGGTGTCTTCATAATCTCTTCTGTAGTTCAA +
Preference number: 6 (lower is better)
Translates to: HVVHHVIGNMHI*FGVFIISSVVQ
Trigger: TTGAACTACAGAAGAGATTATGAAGACACCAAAGCAAATGTGCATATTCCCAATGACATGATGAACCACGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CCA 72 bp TATAGGATTTCTGACTGTAAAGTGTTTGATTCTGCTTaGCTTGCAAAATATCTGGTGTATCCGGCATCACAT +
Preference number: 6 (lower is better)
Translates to: YRISDCKVFDSA*LAKYLVYPASH
Trigger: ATGTGATGCCGGATACACCAGATATTTTGCAAGCCAAGCAGAATCAAACACTTTACAGTCAGAAATCCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp GTAAGGGTATACTTTGACTTGATGGCATTCCAATCTTaGCGATATTTAATATCATCTCGGATCTCACTGCTC +
Preference number: 6 (lower is better)
Translates to: VRVYFDLMAFQS*RYLISSRISLL
Trigger: GAGCAGTGAGATCCGAGATGATATTAAATATCGCAAAGATTGGAATGCCATCAAGTCAAAGTATACCCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp TGCAGCAGTGGGGTTTCTGTAAGGGTATACTTTGACTaGATGGCATTCCAATCTTTGCGATATTTAATATCA +
Preference number: 6 (lower is better)
Translates to: CSSGVSVRVYFD*MAFQSLRYLIS
Trigger: TGATATTAAATATCGCAAAGATTGGAATGCCATCAAGTCAAAGTATACCCTTACAGAAACCCCACTGCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028320.14
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS GCA 72 bp AGAAACTGTGGGAGATCAGGATTCAGAGTATACTTATaGTTCACGTCTTCTCCTTTAGCTTTGTATAAGATA +
Preference number: 6 (lower is better)
Translates to: RNCGRSGFRVYL*FTSSPLALYKI
Trigger: TATCTTATACAAAGCTAAAGGAGAAGACGTGAAGCATAAGTATACTCTGAATCCTGATCTCCCACAGTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp CTCTTCATACTCAGCTTTGTAGTTTTTATCACTATTTaGGGCTGTAACTTTCATACAGTGTGTGTGATACGG +
Preference number: 6 (lower is better)
Translates to: LFILSFVVFITI*GCNFHTVCVIR
Trigger: CCGTATCACACACACTGTATGAAAGTTACAGCCCAAAATAGTGATAAAAACTACAAAGCTGAGTATGAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2
CDS CAA 72 bp AGTCAACATATCTGGACGCAGGATTTCATTACAGCCTaGTTTCAGAAGCATCTTGGCACTAGATTTATATTT +
Preference number: 6 (lower is better)
Translates to: SQHIWTQDFITA*FQKHLGTRFIF
Trigger: AAATATAAATCTAGTGCCAAGATGCTTCTGAAACAAGGCTGTAATGAAATCCTGCGTCCAGATATGTTGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148356.3
ENSMUST00000238749.2
CDS TCA 72 bp GTTTATTCATTTTATACTCAGGTGTTTCGGTCTGCATaGAGTAGATCTGGTCTTTCATGTTCTCAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: VYSFYTQVFRSA*SRSGLSCSQSL
Trigger: AAGACTTTGAGAACATGAAAGACCAGATCTACTTCATGCAGACCGAAACACCTGAGTATAAAATGAATAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036934.12
ENSMUST00000075301.10
ENSMUST00000210179.2
ENSMUST00000238288.2
ENSMUST00000238749.2