Pregenerated sensors for NDUFV3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024038Ensembl transcript IDs: ENSMUST00000046288.16, ENSMUST00000064798.16, ENSMUST00000191598.3
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGTGCGCCGGGACAGCATTAGGAGTGAGCAGACTTGCCTCTGAGTaGAACCTTCAAGGAGGGACTTTCTCACCAACAAGAGCCGTAACT | + |
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Preference number: 1 (lower is better) Translates to: PCAGTALGVSRLASE*NLQGGTFSPTRAVT Trigger: AGTTACGGCTCTTGTTGGTGAGAAAGTCCCTCCTTGAAGGTTGCACTCAGAGGCAAGTCTGCTCACTCCTAATGCTGTCCCGGCGCACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| 3UTR GCA 72 bp | GGGACAGCATTAGGAGTGAGCAGACTTGCCTCTGAGTaGAACCTTCAAGGAGGGACTTTCTCACCAACAAGA | + |
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Preference number: 3 (lower is better) Translates to: GTALGVSRLASE*NLQGGTFSPTR Trigger: TCTTGTTGGTGAGAAAGTCCCTCCTTGAAGGTTGCACTCAGAGGCAAGTCTGCTCACTCCTAATGCTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTCACCAACAAGAGCCGTAACTGACTCCATTTCTCACACGCATTGCTTCCCAGGCAGATGCTTTCCCTaGGCTACGCAGGTTTTACAG | + |
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Preference number: 3 (lower is better) Translates to: FSPTRAVTDSISHTHCFPGRCFP*ATQVLQ Trigger: CTGTAAAACCTGCGTAGCCAAGGGAAAGCATCTGCC...TGGGAAGCAATGCGTGTGAGAAATGGAGTCAGTTACGGCTCTTGTTGGTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| 3UTR TCA 72 bp | TTCTCACACGCATTGCTTCCCAGAGGACATCTTAAATaGCCCCACTCAGATTTACATCAGGCCAACTCTAAT | + |
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Preference number: 3 (lower is better) Translates to: FSHALLPRGHLK*PHSDLHQANSN Trigger: ATTAGAGTTGGCCTGATGTAAATCTGAGTGGGGTCATTTAAGATGTCCTCTGGGAAGCAATGCGTGTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| CDS-3UTR GCA 90 bp | TATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCTGAGGCTGCCGCCAGGGTaGGGGCCTGCCACAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: YSHRQGFMGTNIGVYPELRLPPG*GPATAP Trigger: TGGGGCTGTGGCAGGCCCGCACCCTGGCGGCAGCCT...CAGCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | TATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCTGGAAGCCCTTCATCTGTaGGCAGCAGGCTGCCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YSHRQGFMGTNIGVYPELEALHL*AAGCRQ Trigger: CTGGCGGCAGCCTGCTGCCCACAGATGAAGGGCTTC...CAGCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | GTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGAGTGCCGCTGCTGTGTaGGCGGTTAGGAGCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VTLPFILTGKDSWEPTSGSAAAV*AVRSLP Trigger: GGGCAAGCTCCTAACCGCGCACACAGCAGCGGCACT...CCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | GCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTTCCCGGGAACACCCTTaGCTCCAGGAGCACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: AFYSHRQGFMGTNIGVYPSREHP*LQEHSL Trigger: AAGGCTGTGCTCCTGGAGGCAAGGGTGTTCCCGGGA...AGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR GCA 90 bp | CCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGTCCCGGGAACACCCTTaGCTCCAGGAGCACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PFILTGKDSWEPTSGSTLSREHP*LQEHSL Trigger: AAGGCTGTGCTCCTGGAGGCAAGGGTGTTCCCGGGA...CAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR GCA 90 bp | CTTGGCTACGCAGGTTTTACAGGTGTATGGTGTCTTGAAGCGCTAACACCACTGTCCCGGGAACACCCTTaGCTCCAGGAGCACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LGYAGFTGVWCLEALTPLSREHP*LQEHSL Trigger: AAGGCTGTGCTCCTGGAGGCAAGGGTGTTCCCGGGA...CAGTGGTGTTAGCGCTTCAAGACACCATACACCTGTAAAACCTGCGTAGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| CDS-3UTR GCA 90 bp | ACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTGCGCGGTTAGGAGCTTaGCCCTCTCCTCTGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TLPFILTGKDSWEPTSGSARLGA*PSPLLP Trigger: TGGGAGCAGAGGAGAGGGGCAAGCTCCTAACCGCGC...AGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | CCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGTGCCTTGCCTTTGCTTaGCACTCGGGGAGCACGGTC | + |
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Preference number: 4 (lower is better) Translates to: PFILTGKDSWEPTSGSTLCLAFA*HSGSTV Trigger: GACCGTGCTCCCCGAGTGGCAAGCAAAGGCAAGGCA...CAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | CTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGGGAGCCTCCTTCTaGCACCTGCTTCTCTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LPFILTGKDSWEPTSGSTLGASF*HLLLCA Trigger: AGCGCAGAGAAGCAGGTGCCAGAAGGAGGCTCCCAG...GGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | CTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCTGGAAGACCCTGCCTTaGCTTTGCTTGCCACTCGGG | + |
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Preference number: 4 (lower is better) Translates to: LPFILTGKDSWEPTSGSTWKTLP*LCLPLG Trigger: CCCGAGTGGCAAGCAAAGGCAAGGCAGGGTCTTCCA...GGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | CCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGGCAGGTTCTTGTAGGTaGTGGTGTCAGTCGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PFILTGKDSWEPTSGSTLAGSCR*WCQSAR Trigger: CCGAGCCGACTGACACCACCACCTACAAGAACCTGC...CAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR TCA 90 bp | TTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCAGAACTGGGTGGAGGTaGGTTTTTGGACAGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: FILTGKDSWEPTSGSTLSRTGWR*VFGQCR Trigger: GCGGCACTGTCCAAAAACTCACCTCCACCCAGTTCT...GCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR TCA 90 bp | GAGCTTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACGTGCCCCTGAGCCTTTaGGTCAGAACCCCGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: ELCDSAFYSHRQGFMGTNVPLSL*VRTPCL Trigger: CAAGCACGGGGTTCTGACTCAAAGGCTCAGGGGCAC...GTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | GACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCCGGTTTGGAAGACCCTaGCTTGCCTTTGCTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: DSAFYSHRQGFMGTNIGVRFGRP*LAFACH Trigger: GTGGCAAGCAAAGGCAAGGCAGGGTCTTCCAAACCG...GACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | TCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCTGAGCTCTGTGGGTGGCTTTTaGACCTTGGCCTTCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SHRQGFMGTNIGVYPELSSVGGF*TLAFSF Trigger: AAAAGAGAAGGCCAAGGTCCAAAAGCCACCCACAGA...GCTCAGCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | GTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGCTGCAGGGTCTTCTCTaGGTAGGTGACATCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: VTLPFILTGKDSWEPTSGLQGLL*VGDICG Trigger: CCCACAGATGTCACCTACCCAGAGAAGACCCTGCAG...CCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR TCA 90 bp | CCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGCTGCGCTTTCTTTTCTaGGCAGGGGAGAAGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PFILTGKDSWEPTSGSTLLRFLF*AGEKRS Trigger: AGACCTCTTCTCCCCTGCTCAGAAAAGAAAGCGCAG...CAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | CTTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCAAGACCTCCTGGACCTaGGAGCCTCCTTCTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: LCDSAFYSHRQGFMGTNIKTSWT*EPPSGT Trigger: GGTGCCAGAAGGAGGCTCCCAGGTCCAGGAGGTCTT...GATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | TCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACTCTTCCAAGACCTCCTaGACCTGGGAGCCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SAFYSHRQGFMGTNIGVYSSKTS*TWEPPS Trigger: AGAAGGAGGCTCCCAGGTCCAGGAGGTCTTGGAAGA...GTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| 3UTR CAA 72 bp | CAGGCCAACTCTAATGCAGACGGCAGATGCTTTCCCTaGGCTACGCAGGTTTTACAGGTGTATGGTGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QANSNADGRCFP*ATQVLQVYGVL Trigger: CAAGACACCATACACCTGTAAAACCTGCGTAGCCAAGGGAAAGCATCTGCCGTCTGCATTAGAGTTGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| CDS-3UTR GCA 90 bp | TTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCTGGACCTGGCTTCTTTaGTGTCTTCTACAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FILTGKDSWEPTSGSTLSWTWLL*CLLQAW Trigger: CCAAGCCTGTAGAAGACAGCAAAGAAGCCAGGTCCA...GCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | GAGCTTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACACCCCGTGCTTGGGGTaGAGGCATAACTTTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ELCDSAFYSHRQGFMGTNTPCLG*RHNFLR Trigger: CCTCAGAAAGTTATGCCTCCACCCCAAGCACGGGGT...GTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | CTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTAGCTCCAACATCTCACTaGACTGTGGCCTGGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: LCLLFSQARIHGNQHRGLAPTSH*TVAWMS Trigger: TGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGC...TAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | GTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGCTCGGTTTCCCCCGTTaGTGTTCTTCCTTCACGTTT | + |
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Preference number: 4 (lower is better) Translates to: VTLPFILTGKDSWEPTSGLGFPR*CSSFTF Trigger: AAACGTGAAGGAAGAACACCAACGGGGGAAACCGAG...CCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | TTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGTTGCGTTGTGGGCACTaGCCCACTAGTGGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: FVTLPFILTGKDSWEPTSLRCGH*PTSGLC Trigger: ACACAGCCCACTAGTGGGCCAGTGCCCACAACGCAA...CGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | TTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGCTTCGACTGCCACCTaGAACCTCCCCTCCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: FVTLPFILTGKDSWEPTSASTAT*NLPSRC Trigger: ACATCTGGAGGGGAGGTTCCAGGTGGCAGTCGAAGC...CGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | CTTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGTAGGACTGCATCAGTaGGTGGGGCTTCGACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LCDSAFYSHRQGFMGTNIVGLHQ*VGLRLP Trigger: TGGCAGTCGAAGCCCCACCCACTGATGCAGTCCTAC...GATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | TTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGCAGGTTCTTGTAGGTaGTGGTGTCAGTCGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: FVTLPFILTGKDSWEPTSAGSCR*WCQSAR Trigger: CCGAGCCGACTGACACCACCACCTACAAGAACCTGC...CGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR TCA 90 bp | GCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGGAGGCATAACTTTCTaGGGAAACGCTACCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: AFYSHRQGFMGTNIGVYPGGITF*GNATKV Trigger: GACTTTGGTAGCGTTTCCTCAGAAAGTTATGCCTCC...AGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | CTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTATGGCACCTGCTTCTCTaGGCTTTCTTTTCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LCLLFSQARIHGNQHRGLWHLLL*AFFSEQ Trigger: CTGCTCAGAAAAGAAAGCGCAGAGAAGCAGGTGCCA...TAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | TATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCTGGCACACTTTGTGTCTTaGGATGTAGCTCTTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: YSHRQGFMGTNIGVYPELAHFVS*DVALSP Trigger: AGGAGAAAGAGCTACATCCCAAGACACAAAGTGTGC...CAGCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR CCA 90 bp | CTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGATGGGTAAGAACTaGGTGGAGGTGAGTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LPFILTGKDSWEPTSGSTLMGKN*VEVSFW Trigger: CCAAAAACTCACCTCCACCCAGTTCTTACCCATCAG...GGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | GACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCCCTCCAGATGTGGTCTaGCACTCTCTTCAACAGTAT | + |
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Preference number: 4 (lower is better) Translates to: DSAFYSHRQGFMGTNIGVPPDVV*HSLQQY Trigger: ATACTGTTGAAGAGAGTGCCAGACCACATCTGGAGG...GACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR TCA 90 bp | TGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTACCAAAGTCTTTCTTaGCAAATGCTTCGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: CLLFSQARIHGNQHRGLPYQSLS*QMLRKP Trigger: GGGCTTCCGAAGCATTTGTCAAGAAAGACTTTGGTA...GGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | TTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCAGCTTCACATGGCTTTaGGCTTTCCTTTCCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: FILTGKDSWEPTSGSTLSSFTWL*AFLSCL Trigger: AAGACAGGAAAGGAAAGCGCAAAGCCATGTGAAGCT...GCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | CTTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGCTGGCGGATGTTCTaGACTGGCCTCTTGTATTTG | + |
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Preference number: 4 (lower is better) Translates to: LCDSAFYSHRQGFMGTNIGWRMF*TGLLYL Trigger: CAAATACAAGAGGCCAGTGCAGAACATCCGCCAGCC...GATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | GTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGGCACACTTTGTGTCTTaGGATGTAGCTCTTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VTLPFILTGKDSWEPTSGAHFVS*DVALSP Trigger: AGGAGAAAGAGCTACATCCCAAGACACAAAGTGTGC...CCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR CCA 90 bp | TTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCGTGGCTTTTGGACCTTaGCCTTCTCTTTTGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: FILTGKDSWEPTSGSTLSVAFGP*PSLLQK Trigger: TTTCTGCAAAAGAGAAGGCCAAGGTCCAAAAGCCAC...GCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | CTTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGTGACATCTGTGGGTaGCTTTTGGACCTTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LCDSAFYSHRQGFMGTNIGDICG*LLDLGL Trigger: AAGGCCAAGGTCCAAAAGCCACCCACAGATGTCACC...GATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR TCA 90 bp | TTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGCTGCTCCCACATCTTTaGGCACACTTTGTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FVTLPFILTGKDSWEPTSLLPHL*AHFVSW Trigger: CCAAGACACAAAGTGTGCTCAAAGATGTGGGAGCAG...CGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | CCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGGTCTTTCTTGACAAATaGTTCGGAAGCCCTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: PFILTGKDSWEPTSGSTLVFLDK*FGSPSS Trigger: AGATGAAGGGCTTCCGAAGCATTTGTCAAGAAAGAC...CAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR GCA 90 bp | AGCTTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACACCTCCTTCTGGCACCTaGTTCTCTGCGCTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFVTLPFILTGKDSWEPTPPSGT*FSALSF Trigger: AAAAGAAAGCGCAGAGAAGCAGGTGCCAGAAGGAGG...TGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CCA 90 bp | TTCTCACCAACAAGAGCCGTAACTGACTCCATTTCTCACACGCATTGCTTCCCAGCACACTTTGTGTCTTaGGATGTAGCTCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSPTRAVTDSISHTHCFPAHFVS*DVALSP Trigger: AGGAGAAAGAGCTACATCCCAAGACACAAAGTGTGC...TGGGAAGCAATGCGTGTGAGAAATGGAGTCAGTTACGGCTCTTGTTGGTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| CDS-3UTR TCA 90 bp | GTAACTGACTCCATTTCTCACACGCATTGCTTCCCAGAGGACATCTTAAATGACTGTAAAGCTGCCCTTTaGGCACACTTTGTGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTDSISHTHCFPEDILNDCKAAL*AHFVSW Trigger: CCAAGACACAAAGTGTGCTCAAAGGGCAGCTTTACA...GTCATTTAAGATGTCCTCTGGGAAGCAATGCGTGTGAGAAATGGAGTCAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| CDS GCA 90 bp | TGTAGACAGCCTCACTACAGAAACCAGTTCTCCCGGGAACACCCTTaGCTCCAGGAGCACAGCCTTCAGCGCCCGGATCCGTCCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CRQPHYRNQFSREHP*LQEHSLQRPDPSSP Trigger: CGGGGAGGACGGATCCGGGCGCTGAAGGCTGTGCTCCTGGAGGCAAGGGTGTTCCCGGGAGAACTGGTTTCTGTAGTGAGGCTGTCTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 ENSMUST00000191598.3 |
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| CDS CCA 90 bp | GGCCTGCCACAGCCCCACCTGTGTTCTCCACTGATGGGTAAGAACTaGGTGGAGGTGAGTTTTTGGACAGTGCCGCTGCTGTGTGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLPQPHLCSPLMGKN*VEVSFWTVPLLCAR Trigger: CCGCGCACACAGCAGCGGCACTGTCCAAAAACTCACCTCCACCCAGTTCTTACCCATCAGTGGAGAACACAGGTGGGGCTGTGGCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | TCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCTGAGCCTCCCGGGAACACCCTaGCCTCCAGGAGCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHRQGFMGTNIGVYPELSLPGTP*PPGAQP Trigger: AGGCTGTGCTCCTGGAGGCAAGGGTGTTCCCGGGAG...GCTCAGCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS GCA 90 bp | CAAGACCTCCTGGACCTGGGAGCCTCCTTCTGGCACCTGCTTCTCTaGGCTTTCTTTTCTGAGCAGGGGAGAAGAGGTCTTCCATCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QDLLDLGASFWHLLL*AFFSEQGRRGLPSG Trigger: CCCGGATGGAAGACCTCTTCTCCCCTGCTCAGAAAAGAAAGCGCAGAGAAGCAGGTGCCAGAAGGAGGCTCCCAGGTCCAGGAGGTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 90 bp | AGGTGTATGTGTTGTAGTCATGGTGCTGCAGGTTCTTGTAGGTGGTaGTGTCAGTCGGCTCGGGCTCCTGTGTGTCGGCCGGGGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCMCCSHGAAGSCRW*CQSARAPVCRPGLP Trigger: AGGAAGCCCCGGCCGACACACAGGAGCCCGAGCCGACTGACACCACCACCTACAAGAACCTGCAGCACCATGACTACAACACATACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 90 bp | GGAAGGTGTATGTGTTGTAGTCATGGTGCTGCAGGTTCTTGTAGGTaGTGGTGTCAGTCGGCTCGGGCTCCTGTGTGTCGGCCGGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRCMCCSHGAAGSCR*WCQSARAPVCRPGL Trigger: AAGCCCCGGCCGACACACAGGAGCCCGAGCCGACTGACACCACCACCTACAAGAACCTGCAGCACCATGACTACAACACATACACCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 90 bp | CTGTGTTCTCCACTGATGGGTAAGAACTGGGTGGAGGTGAGTTTTTaGACAGTGCCGCTGCTGTGTGCGCGGTTAGGAGCTTGCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCSPLMGKNWVEVSF*TVPLLCARLGACPS Trigger: AGAGGGGCAAGCTCCTAACCGCGCACACAGCAGCGGCACTGTCCAAAAACTCACCTCCACCCAGTTCTTACCCATCAGTGGAGAACACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | GCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTTGCGCGGTTAGGAGCTaGCCCCTCTCCTCTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AFYSHRQGFMGTNIGVYPCAVRS*PLSSAP Trigger: GGGAGCAGAGGAGAGGGGCAAGCTCCTAACCGCGCA...AGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 90 bp | TCCCCCGTTGGTGTTCTTCCTTCACGTTTTGCTCCAACATCTCACTaGACTGTGGCCTGGATGTCACGGGCTTGGACCTGGCTTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPVGVLPSRFAPTSH*TVAWMSRAWTWLLC Trigger: GCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGAAGGAAGAACACCAACGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | TTCTCACCAACAAGAGCCGTAACTGACTCCATTTCTCACACGCATTGCTTCCCACTCCCGGGAACACCCTaGCCTCCAGGAGCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSPTRAVTDSISHTHCFPLPGTP*PPGAQP Trigger: AGGCTGTGCTCCTGGAGGCAAGGGTGTTCCCGGGAG...TGGGAAGCAATGCGTGTGAGAAATGGAGTCAGTTACGGCTCTTGTTGGTGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| CDS-3UTR CAA 90 bp | TATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCTGCGTGCCCCTGAGCCTTaGAGTCAGAACCCCGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YSHRQGFMGTNIGVYPELRAPEP*SQNPVL Trigger: AAGCACGGGGTTCTGACTCAAAGGCTCAGGGGCACG...CAGCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | GCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGACCCTGCCTTGCCTTaGCTTGCCACTCGGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AFYSHRQGFMGTNIGVYPDPALP*LATRGA Trigger: TGCTCCCCGAGTGGCAAGCAAAGGCAAGGCAGGGTC...AGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS GCA 90 bp | TTGTCTGGTCTCGGTTTCCCCCGTTGGTGTTCTTCCTTCACGTTTTaGTCCAACATCTCACTGGACTGTGGCCTGGATGTCACGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSGLGFPRWCSSFTF*SNISLDCGLDVTGL Trigger: CAAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGAAGGAAGAACACCAACGGGGGAAACCGAGACCAGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 90 bp | GTGGGGCTTCGACTGCCACCTGGAACCTCCCCTCCAGATGTGGTCTaGCACTCTCTTCAACAGTATCTTTCTCCTGAACAGGAAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGLRLPPGTSPPDVV*HSLQQYLSPEQEVS Trigger: AGACACTTCCTGTTCAGGAGAAAGATACTGTTGAAGAGAGTGCCAGACCACATCTGGAGGGGAGGTTCCAGGTGGCAGTCGAAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS TCA 90 bp | GCTGCAGGTTCTTGTAGGTGGTGGTGTCAGTCGGCTCGGGCTCTTTaGGCACACTTTGTGTCTTGGGATGTAGCTCTTTCTCCTTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AAGSCRWWCQSARAL*AHFVSWDVALSPLH Trigger: GTGCAAAGGAGAAAGAGCTACATCCCAAGACACAAAGTGTGCTCAAAGAGCCCGAGCCGACTGACACCACCACCTACAAGAACCTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064798.16 |
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| CDS TCA 90 bp | GGGTGGAGGCATAACTTTCTGAGGAAACGCTACCAAAGTCTTTCTTaGCAAATGCTTCGGAAGCCCTTCATCTGTGGGCAGCAGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GWRHNFLRKRYQSLS*QMLRKPFICGQQAA Trigger: GGCAGCCTGCTGCCCACAGATGAAGGGCTTCCGAAGCATTTGTCAAGAAAGACTTTGGTAGCGTTTCCTCAGAAAGTTATGCCTCCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 90 bp | GTTCTTCCTTCACGTTTTGCTCCAACATCTCACTGGACTGTGGCCTaGATGTCACGGGCTTGGACCTGGCTTCTTTGCTGTCTTCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: VLPSRFAPTSHWTVA*MSRAWTWLLCCLLQ Trigger: CTGTAGAAGACAGCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGAAGGAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 90 bp | TTGGTGTTCTTCCTTCACGTTTTGCTCCAACATCTCACTGGACTGTaGCCTGGATGTCACGGGCTTGGACCTGGCTTCTTTGCTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVFFLHVLLQHLTGL*PGCHGLGPGFFAVF Trigger: GAAGACAGCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGAAGGAAGAACACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | TCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCTGAGCGTAGCTCTTTCTCCTTaGCACTCTTCTCTGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHRQGFMGTNIGVYPELSVALSP*HSSLTL Trigger: CAGAGTCAGAGAAGAGTGCAAAGGAGAAAGAGCTAC...GCTCAGCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACGGTGGAGGTGAGTTTTaGGACAGTGCCGCTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SAFYSHRQGFMGTNIGVYGGGEF*DSAAAV Trigger: CACAGCAGCGGCACTGTCCAAAAACTCACCTCCACC...GTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | CTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCGTCAGAACCCCGTGCTaGGGGTGGAGGCATAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPFILTGKDSWEPTSGSTVRTPC*GWRHNF Trigger: AAAGTTATGCCTCCACCCCAAGCACGGGGTTCTGAC...GGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | CTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACTGGATGTCACGGGCTaGGACCTGGCTTCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLFSQARIHGNQHRGLLDVTG*DLASLL Trigger: CAGCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAG...TAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | GACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCGTCGGCTCGGGCTCTTaGAGCACACTTTGTGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSAFYSHRQGFMGTNIGVVGSGS*STLCVL Trigger: CAAGACACAAAGTGTGCTCAAAGAGCCCGAGCCGAC...GACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064798.16 |
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| CDS CCA 90 bp | TCCTTCAGCTTCACATGGCTTTGCGCTTTCCTTTCCTGTCTTGTCTaGTCTCGGTTTCCCCCGTTGGTGTTCTTCCTTCACGTTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSFTWLCAFLSCLV*SRFPPLVFFLHVLL Trigger: GAGCAAAACGTGAAGGAAGAACACCAACGGGGGAAACCGAGACCAGACAAGACAGGAAAGGAAAGCGCAAAGCCATGTGAAGCTGAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | TCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGAGCTGAGCCTACCAAAGTCTTTCTaGACAAATGCTTCGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHRQGFMGTNIGVYPELSLPKSF*TNASEA Trigger: GGCTTCCGAAGCATTTGTCAAGAAAGACTTTGGTAG...GCTCAGCTCAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | TGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTCTCGGTTTCCCCCGTaGGTGTTCTTCCTTCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLFSQARIHGNQHRGLPSRFPP*VFFLHV Trigger: AACGTGAAGGAAGAACACCAACGGGGGAAACCGAGA...GGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | GTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGCTTTCCTTTCCTGTCTaGTCTGGTCTCGGTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTLPFILTGKDSWEPTSGLSFPV*SGLGFP Trigger: GGGGAAACCGAGACCAGACAAGACAGGAAAGGAAAG...CCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACTGTGGCAGCCTGAATTaGGAGAGGTCCAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAFYSHRQGFMGTNIGVYCGSLN*ERSRFR Trigger: CCTGAACCTGGACCTCTCCAAATTCAGGCTGCCACA...GTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR CAA 90 bp | CTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTATGTGGCAGCCTGAATTaGGAGAGGTCCAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLFSQARIHGNQHRGLCGSLN*ERSRFR Trigger: CCTGAACCTGGACCTCTCCAAATTCAGGCTGCCACA...TAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR CAA 90 bp | CCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCCTGGGTGGCTTTTGGACCTaGGCCTTCTCTTTTGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFILTGKDSWEPTSGSTLGGFWT*AFSFAE Trigger: TTCTGCAAAAGAGAAGGCCAAGGTCCAAAAGCCACC...CAGGGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | CTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCTACCTTGGACCTGGCTTCTTaGCTGTCTTCTACAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPFILTGKDSWEPTSGSTLDLAS*LSSTGL Trigger: CAAGCCTGTAGAAGACAGCAAAGAAGCCAGGTCCAA...GGTAGACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 90 bp | CTTCTTAGGCTGCAGGGTCTTCTCTGGGTAGGTGACATCTGTGGGTaGCTTTTGGACCTTGGCCTTCTCTTTTGCAGAAACTGTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRLQGLLWVGDICG*LLDLGLLFCRNCDF Trigger: AAAATCACAGTTTCTGCAAAAGAGAAGGCCAAGGTCCAAAAGCCACCCACAGATGTCACCTACCCAGAGAAGACCCTGCAGCCTAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | GACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACATCGGGGTCGTAGCTCTTTCTCCTTaGCACTCTTCTCTGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSAFYSHRQGFMGTNIGVVALSP*HSSLTL Trigger: CAGAGTCAGAGAAGAGTGCAAAGGAGAAAGAGCTAC...GACCCCGATGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046288.16 ENSMUST00000064798.16 |
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| CDS-3UTR CAA 90 bp | CTTGGCTACGCAGGTTTTACAGGTGTATGGTGTCTTGAAGCGCTAACACCACTGGTAGCTCTTTCTCCTTaGCACTCTTCTCTGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGYAGFTGVWCLEALTPLVALSP*HSSLTL Trigger: CAGAGTCAGAGAAGAGTGCAAAGGAGAAAGAGCTAC...CAGTGGTGTTAGCGCTTCAAGACACCATACACCTGTAAAACCTGCGTAGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191598.3 |
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| CDS CCA 90 bp | GGTCTGAGTCATGTTCCTCCCCATCAGAATCTGAATCTGAGGAGCTaGATGAGGAAGATGAAGATGAATCGTTTGTCACTTTCTGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: GLSHVPPHQNLNLRS*MRKMKMNRLSLSAR Trigger: ACGTGCAGAAAGTGACAAACGATTCATCTTCATCTTCCTCATCCAGCTCCTCAGATTCAGATTCTGATGGGGAGGAACATGACTCAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | GAGCTTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACTCTGCTCCCACATCTTaGAGCACACTTTGTGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ELCDSAFYSHRQGFMGTNSAPTS*STLCVL Trigger: CAAGACACAAAGTGTGCTCAAAGATGTGGGAGCAGA...GTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS-3UTR CAA 90 bp | AGCTTTGTGACTCTGCCTTTTATTCTCACAGGCAAGGATTCATGGGAACCAACACTGTCTTCTACAGGCTaGGTCCATTTCTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFVTLPFILTGKDSWEPTLSSTG*VHFFLG Trigger: GCCTAAGAAGAAATGGACCAAGCCTGTAGAAGACAG...TGTTGGTTCCCATGAATCCTTGCCTGTGAGAATAAAAGGCAGAGTCACAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS GCA 72 bp | AATGCTTCGGAAGCCCTTCATCTGTGGGCAGCAGGCTaGCGCCAGGGTGCGGGCCTGCCACAGCCCCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: NASEALHLWAAG*RQGAGLPQPHL Trigger: CAGGTGGGGCTGTGGCAGGCCCGCACCCTGGCGGCAGCCTGCTGCCCACAGATGAAGGGCTTCCGAAGCATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
||
| CDS CCA 72 bp | GTCGGCTCGGGCTCCTGTGTGTCGGCCGGGGCTTCCTaGGGTAGGACTGCATCAGTGGGTGGGGCTTCGACT | + |
|
Preference number: 6 (lower is better) Translates to: VGSGSCVSAGAS*GRTASVGGAST Trigger: AGTCGAAGCCCCACCCACTGATGCAGTCCTACCCCAGGAAGCCCCGGCCGACACACAGGAGCCCGAGCCGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
||
| CDS GCA 72 bp | CGTCAAGGGCCGGGAGGCCTCCGGTTTGGAAGACCCTaGCTTGCCTTTGCTTGCCACTCGGGGAGCACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RQGPGGLRFGRP*LAFACHSGSTV Trigger: GACCGTGCTCCCCGAGTGGCAAGCAAAGGCAAGGCAGGGTCTTCCAAACCGGAGGCCTCCCGGCCCTTGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
||
| CDS CCA 72 bp | GGGCTCCAGTCGTCAAGGGCCGGGAGGCCTCCGGTTTaGAAGACCCTGCCTTGCCTTTGCTTGCCACTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLQSSRAGRPPV*KTLPCLCLPLG Trigger: CCCGAGTGGCAAGCAAAGGCAAGGCAGGGTCTTCCAAACCGGAGGCCTCCCGGCCCTTGACGACTGGAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
||
| CDS CAA 72 bp | AAGGGCCGGGAGGCCTCCGGTTTGGAAGACCCTGCCTaGCCTTTGCTTGCCACTCGGGGAGCACGGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KGREASGLEDPA*PLLATRGARSE Trigger: CTCAGACCGTGCTCCCCGAGTGGCAAGCAAAGGCAAGGCAGGGTCTTCCAAACCGGAGGCCTCCCGGCCCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 90 bp | CCAGTCGTCAAGGGCCGGGAGGCCTCCGGTTTGGAAGACCCTGCCTaGCCTTTGCTTGCCACTCGGGGAGCACGGTCTGAGTCATGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVVKGREASGLEDPA*PLLATRGARSESCS Trigger: GGAACATGACTCAGACCGTGCTCCCCGAGTGGCAAGCAAAGGCAAGGCAGGGTCTTCCAAACCGGAGGCCTCCCGGCCCTTGACGACTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
||
| CDS CCA 72 bp | CCTTCCTGGGGGCAACGGCTGGCGGATGTTCTGCACTaGCCTCTTGTATTTGCGTTGTGGGCACTGGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSWGQRLADVLH*PLVFALWALAH Trigger: GTGGGCCAGTGCCCACAACGCAAATACAAGAGGCCAGTGCAGAACATCCGCCAGCCGTTGCCCCCAGGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 72 bp | GGGGGCAACGGCTGGCGGATGTTCTGCACTGGCCTCTaGTATTTGCGTTGTGGGCACTGGCCCACTAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GGNGWRMFCTGL*YLRCGHWPTSG Trigger: CCCACTAGTGGGCCAGTGCCCACAACGCAAATACAAGAGGCCAGTGCAGAACATCCGCCAGCCGTTGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS GCA 72 bp | GGGAGGCCTCCGGTTTGGAAGACCCTGCCTTGCCTTTaGTTGCCACTCGGGGAGCACGGTCTGAGTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: GRPPVWKTLPCL*LPLGEHGLSHV Trigger: AACATGACTCAGACCGTGCTCCCCGAGTGGCAAGCAAAGGCAAGGCAGGGTCTTCCAAACCGGAGGCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS GCA 72 bp | AGCTCCCTTCCTGGGGGCAACGGCTGGCGGATGTTCTaGACTGGCCTCTTGTATTTGCGTTGTGGGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SSLPGGNGWRMF*TGLLYLRCGHW Trigger: CCAGTGCCCACAACGCAAATACAAGAGGCCAGTGCAGAACATCCGCCAGCCGTTGCCCCCAGGAAGGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | AGGACTGCATCAGTGGGTGGGGCTTCGACTGCCACCTaGAACCTCCCCTCCAGATGTGGTCTGGCACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RTASVGGASTAT*NLPSRCGLALS Trigger: AGAGAGTGCCAGACCACATCTGGAGGGGAGGTTCCAGGTGGCAGTCGAAGCCCCACCCACTGATGCAGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS GCA 72 bp | ACGGCTGGCGGATGTTCTGCACTGGCCTCTTGTATTTaGGTTGTGGGCACTGGCCCACTAGTGGGCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TAGGCSALASCI*VVGTGPLVGCV Trigger: CACACAGCCCACTAGTGGGCCAGTGCCCACAACGCAAATACAAGAGGCCAGTGCAGAACATCCGCCAGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | TGTTGTAGTCATGGTGCTGCAGGTTCTTGTAGGTGGTaGTGTCAGTCGGCTCGGGCTCCTGTGTGTCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: CCSHGAAGSCRW*CQSARAPVCRP Trigger: CGGCCGACACACAGGAGCCCGAGCCGACTGACACCACCACCTACAAGAACCTGCAGCACCATGACTACAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 72 bp | AACGGCTGGCGGATGTTCTGCACTGGCCTCTTGTATTaGCGTTGTGGGCACTGGCCCACTAGTGGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: NGWRMFCTGLLY*RCGHWPTSGLC Trigger: ACACAGCCCACTAGTGGGCCAGTGCCCACAACGCAAATACAAGAGGCCAGTGCAGAACATCCGCCAGCCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS TCA 72 bp | CTCCTTCTGGCACCTGCTTCTCTGCGCTTTCTTTTCTaGGCAGGGGAGAAGAGGTCTTCCATCCGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLLAPASLRFLF*AGEKRSSIRAL Trigger: CAGAGCCCGGATGGAAGACCTCTTCTCCCCTGCTCAGAAAAGAAAGCGCAGAGAAGCAGGTGCCAGAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | CCACTGATGGGTAAGAACTGGGTGGAGGTGAGTTTTTaGACAGTGCCGCTGCTGTGTGCGCGGTTAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PLMGKNWVEVSF*TVPLLCARLGA Trigger: AGCTCCTAACCGCGCACACAGCAGCGGCACTGTCCAAAAACTCACCTCCACCCAGTTCTTACCCATCAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | CAGCCCCACCTGTGTTCTCCACTGATGGGTAAGAACTaGGTGGAGGTGAGTTTTTGGACAGTGCCGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QPHLCSPLMGKN*VEVSFWTVPLL Trigger: CAGCAGCGGCACTGTCCAAAAACTCACCTCCACCCAGTTCTTACCCATCAGTGGAGAACACAGGTGGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | ATGTGTTGTAGTCATGGTGCTGCAGGTTCTTGTAGGTaGTGGTGTCAGTCGGCTCGGGCTCCTGTGTGTCGG | + |
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Preference number: 6 (lower is better) Translates to: MCCSHGAAGSCR*WCQSARAPVCR Trigger: CCGACACACAGGAGCCCGAGCCGACTGACACCACCACCTACAAGAACCTGCAGCACCATGACTACAACACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | CACTGGACTGTGGCCTGGATGTCACGGGCTTGGACCTaGCTTCTTTGCTGTCTTCTACAGGCTTGGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: HWTVAWMSRAWT*LLCCLLQAWSI Trigger: AATGGACCAAGCCTGTAGAAGACAGCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | GGTGTTCTTCCTTCACGTTTTGCTCCAACATCTCACTaGACTGTGGCCTGGATGTCACGGGCTTGGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: GVLPSRFAPTSH*TVAWMSRAWTW Trigger: CCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGAAGGAAGAACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | TCTGAGCAGGGGAGAAGAGGTCTTCCATCCGGGCTCTaGCACTTTTGGTTCCGGATATCTAGCTCCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SEQGRRGLPSGL*HFWFRISSSLP Trigger: AGGAAGGGAGCTAGATATCCGGAACCAAAAGTGCCAGAGCCCGGATGGAAGACCTCTTCTCCCCTGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | GGCTTCGACTGCCACCTGGAACCTCCCCTCCAGATGTaGTCTGGCACTCTCTTCAACAGTATCTTTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GFDCHLEPPLQM*SGTLFNSIFLL Trigger: CAGGAGAAAGATACTGTTGAAGAGAGTGCCAGACCACATCTGGAGGGGAGGTTCCAGGTGGCAGTCGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 90 bp | TCACTGGACTGTGGCCTGGATGTCACGGGCTTGGACCTGGCTTCTTaGCTGTCTTCTACAGGCTTGGTCCATTTCTTCTTAGGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLDCGLDVTGLDLAS*LSSTGLVHFFLGCR Trigger: CCTGCAGCCTAAGAAGAAATGGACCAAGCCTGTAGAAGACAGCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 90 bp | CTTGTCTGGTCTCGGTTTCCCCCGTTGGTGTTCTTCCTTCACGTTTaGCTCCAACATCTCACTGGACTGTGGCCTGGATGTCACGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LVWSRFPPLVFFLHV*LQHLTGLWPGCHGL Trigger: AAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGAAGGAAGAACACCAACGGGGGAAACCGAGACCAGACAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS GCA 72 bp | CTCGGTTTCCCCCGTTGGTGTTCTTCCTTCACGTTTTaGTCCAACATCTCACTGGACTGTGGCCTGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: LGFPRWCSSFTF*SNISLDCGLDV Trigger: GACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGAAGGAAGAACACCAACGGGGGAAACCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | TCACGTTTTGCTCCAACATCTCACTGGACTGTGGCCTaGATGTCACGGGCTTGGACCTGGCTTCTTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SRFAPTSHWTVA*MSRAWTWLLCC Trigger: ACAGCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | TTCTGCACTGGCCTCTTGTATTTGCGTTGTGGGCACTaGCCCACTAGTGGGCTGTGTGGGTACTCTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: FCTGLLYLRCGH*PTSGLCGYSDF Trigger: AAAGTCAGAGTACCCACACAGCCCACTAGTGGGCCAGTGCCCACAACGCAAATACAAGAGGCCAGTGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | CTGCAGGGTCTTCTCTGGGTAGGTGACATCTGTGGGTaGCTTTTGGACCTTGGCCTTCTCTTTTGCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: LQGLLWVGDICG*LLDLGLLFCRN Trigger: GTTTCTGCAAAAGAGAAGGCCAAGGTCCAAAAGCCACCCACAGATGTCACCTACCCAGAGAAGACCCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | TTCCTTCACGTTTTGCTCCAACATCTCACTGGACTGTaGCCTGGATGTCACGGGCTTGGACCTGGCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FLHVLLQHLTGL*PGCHGLGPGFF Trigger: AAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 72 bp | TCTCGGTTTCCCCCGTTGGTGTTCTTCCTTCACGTTTaGCTCCAACATCTCACTGGACTGTGGCCTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: SRFPPLVFFLHV*LQHLTGLWPGC Trigger: ACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAACGTGAAGGAAGAACACCAACGGGGGAAACCGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 72 bp | TCAGCTTCACATGGCTTTGCGCTTTCCTTTCCTGTCTaGTCTGGTCTCGGTTTCCCCCGTTGGTGTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SASHGFALSFPV*SGLGFPRWCSS Trigger: GGAAGAACACCAACGGGGGAAACCGAGACCAGACAAGACAGGAAAGGAAAGCGCAAAGCCATGTGAAGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 90 bp | TTTTGCTCCAACATCTCACTGGACTGTGGCCTGGATGTCACGGGCTaGGACCTGGCTTCTTTGCTGTCTTCTACAGGCTTGGTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: FCSNISLDCGLDVTG*DLASLLSSTGLVHF Trigger: GAAATGGACCAAGCCTGTAGAAGACAGCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTTGGAGCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | CTTGGTCCATTTCTTCTTAGGCTGCAGGGTCTTCTCTaGGTAGGTGACATCTGTGGGTGGCTTTTGGACCTT | + |
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Preference number: 6 (lower is better) Translates to: LGPFLLRLQGLL*VGDICGWLLDL Trigger: AAGGTCCAAAAGCCACCCACAGATGTCACCTACCCAGAGAAGACCCTGCAGCCTAAGAAGAAATGGACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CCA 72 bp | TTCACATGGCTTTGCGCTTTCCTTTCCTGTCTTGTCTaGTCTCGGTTTCCCCCGTTGGTGTTCTTCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FTWLCAFLSCLV*SRFPPLVFFLH Trigger: GTGAAGGAAGAACACCAACGGGGGAAACCGAGACCAGACAAGACAGGAAAGGAAAGCGCAAAGCCATGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 72 bp | GGCTTGGACCTGGCTTCTTTGCTGTCTTCTACAGGCTaGGTCCATTTCTTCTTAGGCTGCAGGGTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GLDLASLLSSTG*VHFFLGCRVFS Trigger: AGAGAAGACCCTGCAGCCTAAGAAGAAATGGACCAAGCCTGTAGAAGACAGCAAAGAAGCCAGGTCCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 72 bp | TGTGGCCTGGATGTCACGGGCTTGGACCTGGCTTCTTaGCTGTCTTCTACAGGCTTGGTCCATTTCTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: CGLDVTGLDLAS*LSSTGLVHFFL Trigger: TAAGAAGAAATGGACCAAGCCTGTAGAAGACAGCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 72 bp | CGTGGCTGGGTAAGATTCCTTCAGCTTCACATGGCTTaGCGCTTTCCTTTCCTGTCTTGTCTGGTCTCGGTT | + |
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Preference number: 6 (lower is better) Translates to: RGWVRFLQLHMA*RFPFLSCLVSV Trigger: AACCGAGACCAGACAAGACAGGAAAGGAAAGCGCAAAGCCATGTGAAGCTGAAGGAATCTTACCCAGCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 72 bp | TTCCTTTCCTGTCTTGTCTGGTCTCGGTTTCCCCCGTaGGTGTTCTTCCTTCACGTTTTGCTCCAACATCTC | + |
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Preference number: 6 (lower is better) Translates to: FLSCLVWSRFPP*VFFLHVLLQHL Trigger: GAGATGTTGGAGCAAAACGTGAAGGAAGAACACCAACGGGGGAAACCGAGACCAGACAAGACAGGAAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS CAA 90 bp | AAGATTCCTTCAGCTTCACATGGCTTTGCGCTTTCCTTTCCTGTCTaGTCTGGTCTCGGTTTCCCCCGTTGGTGTTCTTCCTTCACGTTT | + |
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Preference number: 6 (lower is better) Translates to: KIPSASHGFALSFPV*SGLGFPRWCSSFTF Trigger: AAACGTGAAGGAAGAACACCAACGGGGGAAACCGAGACCAGACAAGACAGGAAAGGAAAGCGCAAAGCCATGTGAAGCTGAAGGAATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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| CDS TCA 72 bp | TCAGAACCCCGTGCTTGGGGTGGAGGCATAACTTTCTaGGGAAACGCTACCAAAGTCTTTCTTGACAAATGC | + |
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Preference number: 6 (lower is better) Translates to: SEPRAWGGGITF*GNATKVFLDKC Trigger: GCATTTGTCAAGAAAGACTTTGGTAGCGTTTCCTCAGAAAGTTATGCCTCCACCCCAAGCACGGGGTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046288.16 |
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