Pregenerated sensors for NDUFS7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020153

Ensembl transcript IDs: ENSMUST00000020361.7, ENSMUST00000105364.8

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGACCACGGCTCCAGCTCCAGCCTTGGACACAGCAGACTGTGTGCTaGTCAGGCTCGGGCTTGGGCTCGGGCTCGGGCCCTCAGTGGCTA	+
Preference number: 5 (lower is better) Translates to: GPRLQLQPWTQQTVC*SGSGLGSGSGPQWL Trigger: TAGCCACTGAGGGCCCGAGCCCGAGCCCAAGCCCGAGCCTGAGCAGCACACAGTCTGCTGTGTCCAAGGCTGGAGCTGGAGCCGTGGTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CCA 90 bp	TCCAGCCTTGGACACAGCAGACTGTGTGCTGCTCAGGCTCGGGCTTaGGCTCGGGCTCGGGCCCTCAGTGGCTACACTCTGATGAACTCT	+
Preference number: 5 (lower is better) Translates to: SSLGHSRLCAAQARA*ARARALSGYTLMNS Trigger: AGAGTTCATCAGAGTGTAGCCACTGAGGGCCCGAGCCCGAGCCCAAGCCCGAGCCTGAGCAGCACACAGTCTGCTGTGTCCAAGGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS GCA 90 bp	CGGCCGTGGGCGGGCAGCCTGGCACATAGATGTCCACTGGCACAATaGGGTCACAGCCACGAACAACCGAGTAGGAGTAGTGGTAGTAGC	+
Preference number: 5 (lower is better) Translates to: RPWAGSLAHRCPLAQ*GHSHEQPSRSSGSS Trigger: GCTACTACCACTACTCCTACTCGGTTGTTCGTGGCTGTGACCGCATTGTGCCAGTGGACATCTATGTGCCAGGCTGCCCGCCCACGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CCA 90 bp	GAGTGCTTCGGCCGTGGGCGGGCAGCCTGGCACATAGATGTCCACTaGCACAATGCGGTCACAGCCACGAACAACCGAGTAGGAGTAGTG	+
Preference number: 5 (lower is better) Translates to: ECFGRGRAAWHIDVH*HNAVTATNNRVGVV Trigger: CACTACTCCTACTCGGTTGTTCGTGGCTGTGACCGCATTGTGCCAGTGGACATCTATGTGCCAGGCTGCCCGCCCACGGCCGAAGCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS TCA 90 bp	TCATCCAGCTTGGTCACCACATACTCAGCCCGGCTTCGGGGAAGATaGGAGAGCTTGGGGACCACGGCTCCAGCTCCAGCCTTGGACACA	+
Preference number: 5 (lower is better) Translates to: SSSLVTTYSARLRGR*ESLGTTAPAPALDT Trigger: TGTGTCCAAGGCTGGAGCTGGAGCCGTGGTCCCCAAGCTCTCTCATCTTCCCCGAAGCCGGGCTGAGTATGTGGTGACCAAGCTGGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CCA 90 bp	CTGCAAGATGCCATAAAGGAGTGCTTCGGCCGTGGGCGGGCAGCCTaGCACATAGATGTCCACTGGCACAATGCGGTCACAGCCACGAAC	+
Preference number: 5 (lower is better) Translates to: LQDAIKECFGRGRAA*HIDVHWHNAVTATN Trigger: GTTCGTGGCTGTGACCGCATTGTGCCAGTGGACATCTATGTGCCAGGCTGCCCGCCCACGGCCGAAGCACTCCTTTATGGCATCTTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS GCA 90 bp	TTCACGCTTGATCTTCCGTTGCAGCTGCAAGATGCCATAAAGGAGTaGTTCGGCCGTGGGCGGGCAGCCTGGCACATAGATGTCCACTGG	+
Preference number: 5 (lower is better) Translates to: FTLDLPLQLQDAIKE*FGRGRAAWHIDVHW Trigger: CCAGTGGACATCTATGTGCCAGGCTGCCCGCCCACGGCCGAAGCACTCCTTTATGGCATCTTGCAGCTGCAACGGAAGATCAAGCGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CCA 90 bp	GCCATCTTGTTGGTAAGCGTGCCAGCTACAATCATCACATCAGCCTaGCGCGGACTGGCACGGAACACCACACCGAAGCGGTCCATGTCA	+
Preference number: 5 (lower is better) Translates to: AILLVSVPATIITSA*RGLARNTTPKRSMS Trigger: TGACATGGACCGCTTCGGTGTGGTGTTCCGTGCCAGTCCGCGCCAGGCTGATGTGATGATTGTAGCTGGCACGCTTACCAACAAGATGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CCA 72 bp	GAGAGAGCTTGGGGACCACGGCTCCAGCTCCAGCCTTaGACACAGCAGACTGTGTGCTGCTCAGGCTCGGGC	+
Preference number: 6 (lower is better) Translates to: ERAWGPRLQLQP*TQQTVCCSGSG Trigger: GCCCGAGCCTGAGCAGCACACAGTCTGCTGTGTCCAAGGCTGGAGCTGGAGCCGTGGTCCCCAAGCTCTCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS GCA 72 bp	GGCTCGGGCCCTCAGTGGCTACACTCTGATGAACTCTaGGCAGCTGGACCTGTGCTGTGCGCAGACCCAGGA	+
Preference number: 6 (lower is better) Translates to: GSGPQWLHSDEL*AAGPVLCADPG Trigger: TCCTGGGTCTGCGCACAGCACAGGTCCAGCTGCGCAGAGTTCATCAGAGTGTAGCCACTGAGGGCCCGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CAA 90 bp	CTCCAGCCTTGGACACAGCAGACTGTGTGCTGCTCAGGCTCGGGCTaGGGCTCGGGCTCGGGCCCTCAGTGGCTACACTCTGATGAACTC	+
Preference number: 6 (lower is better) Translates to: LQPWTQQTVCCSGSG*GSGSGPQWLHSDEL Trigger: GAGTTCATCAGAGTGTAGCCACTGAGGGCCCGAGCCCGAGCCCAAGCCCGAGCCTGAGCAGCACACAGTCTGCTGTGTCCAAGGCTGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS TCA 72 bp	TTGGTCACCACATACTCAGCCCGGCTTCGGGGAAGATaGGAGAGCTTGGGGACCACGGCTCCAGCTCCAGCC	+
Preference number: 6 (lower is better) Translates to: LVTTYSARLRGR*ESLGTTAPAPA Trigger: GGCTGGAGCTGGAGCCGTGGTCCCCAAGCTCTCTCATCTTCCCCGAAGCCGGGCTGAGTATGTGGTGACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CCA 72 bp	GGCCGTGGGCGGGCAGCCTGGCACATAGATGTCCACTaGCACAATGCGGTCACAGCCACGAACAACCGAGTA	+
Preference number: 6 (lower is better) Translates to: GRGRAAWHIDVH*HNAVTATNNRV Trigger: TACTCGGTTGTTCGTGGCTGTGACCGCATTGTGCCAGTGGACATCTATGTGCCAGGCTGCCCGCCCACGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CCA 72 bp	GCCATAAAGGAGTGCTTCGGCCGTGGGCGGGCAGCCTaGCACATAGATGTCCACTGGCACAATGCGGTCACA	+
Preference number: 6 (lower is better) Translates to: AIKECFGRGRAA*HIDVHWHNAVT Trigger: TGTGACCGCATTGTGCCAGTGGACATCTATGTGCCAGGCTGCCCGCCCACGGCCGAAGCACTCCTTTATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CAA 72 bp	GAGCTCCGGCGTGCCCAGTTGATGAGGTCATCCAGCTaGGTCACCACATACTCAGCCCGGCTTCGGGGAAGA	+
Preference number: 6 (lower is better) Translates to: ELRRAQLMRSSS*VTTYSARLRGR Trigger: TCTTCCCCGAAGCCGGGCTGAGTATGTGGTGACCAAGCTGGATGACCTCATCAACTGGGCACGCCGGAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CAA 90 bp	TCGGGCATCTGGTCGTACACCTTTCGGAGCGCGGGGGCCATCTTGTaGGTAAGCGTGCCAGCTACAATCATCACATCAGCCTGGCGCGGA	+
Preference number: 6 (lower is better) Translates to: SGIWSYTFRSAGAIL*VSVPATIITSAWRG Trigger: TCCGCGCCAGGCTGATGTGATGATTGTAGCTGGCACGCTTACCAACAAGATGGCCCCCGCGCTCCGAAAGGTGTACGACCAGATGCCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS GCA 72 bp	GATCTTCCGTTGCAGCTGCAAGATGCCATAAAGGAGTaGTTCGGCCGTGGGCGGGCAGCCTGGCACATAGAT	+
Preference number: 6 (lower is better) Translates to: DLPLQLQDAIKE*FGRGRAAWHID Trigger: ATCTATGTGCCAGGCTGCCCGCCCACGGCCGAAGCACTCCTTTATGGCATCTTGCAGCTGCAACGGAAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CCA 72 bp	TGCCAGCTACAATCATCACATCAGCCTGGCGCGGACTaGCACGGAACACCACACCGAAGCGGTCCATGTCAT	+
Preference number: 6 (lower is better) Translates to: CQLQSSHQPGAD*HGTPHRSGPCH Trigger: ATGACATGGACCGCTTCGGTGTGGTGTTCCGTGCCAGTCCGCGCCAGGCTGATGTGATGATTGTAGCTGGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CCA 72 bp	CAACCGAGTAGGAGTAGTGGTAGTAGCCACCGCCATTaGCACAGCTCCCCATGGACACCACATAGCGGGGTT	+
Preference number: 6 (lower is better) Translates to: QPSRSSGSSHRH*HSSPWTPHSGV Trigger: AACCCCGCTATGTGGTGTCCATGGGGAGCTGTGCCAATGGCGGTGGCTACTACCACTACTCCTACTCGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CAA 90 bp	CCTGCGGTACCAGATCTTCAGCTTCTGTTCACGCTTGATCTTCCGTaGCAGCTGCAAGATGCCATAAAGGAGTGCTTCGGCCGTGGGCGG	+
Preference number: 6 (lower is better) Translates to: PAVPDLQLLFTLDLP*QLQDAIKECFGRGR Trigger: CCGCCCACGGCCGAAGCACTCCTTTATGGCATCTTGCAGCTGCAACGGAAGATCAAGCGTGAACAGAAGCTGAAGATCTGGTACCGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CAA 72 bp	TGGTCGTACACCTTTCGGAGCGCGGGGGCCATCTTGTaGGTAAGCGTGCCAGCTACAATCATCACATCAGCC	+
Preference number: 6 (lower is better) Translates to: WSYTFRSAGAIL*VSVPATIITSA Trigger: GGCTGATGTGATGATTGTAGCTGGCACGCTTACCAACAAGATGGCCCCCGCGCTCCGAAAGGTGTACGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS CAA 72 bp	CCAGATCTTCAGCTTCTGTTCACGCTTGATCTTCCGTaGCAGCTGCAAGATGCCATAAAGGAGTGCTTCGGC	+
Preference number: 6 (lower is better) Translates to: PDLQLLFTLDLP*QLQDAIKECFG Trigger: GCCGAAGCACTCCTTTATGGCATCTTGCAGCTGCAACGGAAGATCAAGCGTGAACAGAAGCTGAAGATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8
CDS TCA 72 bp	ACCTGCGGTACCAGATCTTCAGCTTCTGTTCACGCTTaGTCTTCCGTTGCAGCTGCAAGATGCCATAAAGGA	+
Preference number: 6 (lower is better) Translates to: TCGTRSSASVHA*SSVAAARCHKG Trigger: TCCTTTATGGCATCTTGCAGCTGCAACGGAAGATCAAGCGTGAACAGAAGCTGAAGATCTGGTACCGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020361.7 ENSMUST00000105364.8

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