Pregenerated sensors for NDUFS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013593Ensembl transcript IDs: ENSMUST00000013737.13, ENSMUST00000111318.8, ENSMUST00000191871.2, ENSMUST00000194778.6
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACCCTCGAAGGAGCAGCTaGCAGGCAAGGCAGCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: MSPFLVHAQKACAAKCEHPRRSS*QARQLE Trigger: CTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGG...GTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | CTCCCACCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGAGTCTCAGGACTCCGTaGGCTGCTGGGTGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LPPDTGLEGAADRQGSSRSLRTP*AAGCWG Trigger: GCCCCAGCACCCAGCAGCCCACGGAGTCCTGAGACT...CCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGGTGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGTGGGCTGCTGGGTGCTaGGGCCCAAAGTTCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TGLEGAADRQGSSRVVLSWAAGC*GPKFRV Trigger: GACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCA...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGGACTCCGTGGGCTGCTaGGTGCTGGGGCCCAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: TGLEGAADRQGSSRVVLSDSVGC*VLGPKV Trigger: AACTTTGGGCCCCAGCACCCAGCAGCCCACGGAGTC...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | CCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGTTCCGCAAGTCCCACTaGATGCCTGAGCCTCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PDTGLEGAADRQGSSRVVFRKSH*MPEPRS Trigger: GCTCCGAGGCTCAGGCATCCAGTGGGACTTGCGGAA...CACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR TCA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGTGCAGGAGCCCGATGTaGGGGTCACATTTCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TGLEGAADRQGSSRVVLSCRSPM*GSHFRT Trigger: GGTGCGGAAATGTGACCCTCACATCGGGCTCCTGCA...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | CTCCCACCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGCAAGTCCCACTGGATaGCTGAGCCTCGGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPDTGLEGAADRQGSSRASPTG*LSLGAS Trigger: TGATGCTCCGAGGCTCAGGCATCCAGTGGGACTTGC...CCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGGTGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | CCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGGCAAGTCCCACTGGATaGCTGAGCCTCGGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PDTGLEGAADRQGSSRVVASPTG*LSLGAS Trigger: TGATGCTCCGAGGCTCAGGCATCCAGTGGGACTTGC...CACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTGACTCCGTGGGCTGCTaGGTGCTGGGGCCCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TQASKEQLTGKAARGWCFDSVGC*VLGPKV Trigger: AACTTTGGGCCCCAGCACCCAGCAGCCCACGGAGTC...AAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGTTCCGCAAGTCCCACTaGATGCCTGAGCCTCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLEGAADRQGSSRVVLSFRKSH*MPEPRS Trigger: GCTCCGAGGCTCAGGCATCCAGTGGGACTTGCGGAA...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR TCA 90 bp | ACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCAGTCCCACTGGATGCCTaGGCCTCGGAGCATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: THRDTQPCLPPDTGLEGAVPLDA*ASEHHP Trigger: GGGGTGATGCTCCGAGGCTCAGGCATCCAGTGGGAC...TGCTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR TCA 90 bp | CCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGTCAGACACTGCTCAATaGTTCGCAGGGACTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PDTGLEGAADRQGSSRVVSDTAQ*FAGTGA Trigger: TGCGCCAGTCCCTGCGAATCATTGAGCAGTGTCTGA...CACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | ACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCACTCGGATCCACTGTaGCCGAGGAGGAGGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQASKEQLTGKAARGWCFHSDPL*PRRRLD Trigger: ATCCAACCTCCTCCTCGGGCACAGTGGATCCGAGTG...AAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGTGCCCATTCAATATCTaGCTGCCACTGCCGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TGLEGAADRQGSSRVVLSCPFNI*LPLPST Trigger: GGTGCTCGGCAGTGGCAGCCAGATATTGAATGGGCA...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | CCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGGCCCGAGGAGGAGGTTaGATGTTTAGCAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDTGLEGAADRQGSSRVVARGGG*MFSNFS Trigger: GGAGAAGTTGCTAAACATCCAACCTCCTCCTCGGGC...CACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCTCTGCTCGCTTCGGTaGGGACACTTTGGCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TQASKEQLTGKAARGWCFLCSLR*GHFGVI Trigger: GATGACGCCAAAGTGTCCCCACCGAAGCGAGCAGAG...AAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | ACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGATATCTGGCTGCCACTaGCGAGCACCTCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: THTETHSLVSHQTQASKEISGCH*RAPLLG Trigger: GCCCAGCAGAGGTGCTCGGCAGTGGCAGCCAGATAT...CTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | ACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCAATATCTGGCTGCCACTaGCGAGCACCTCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: THRDTQPCLPPDTGLEGAISGCH*RAPLLG Trigger: GCCCAGCAGAGGTGCTCGGCAGTGGCAGCCAGATAT...TGCTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | CTCCCACCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGATAAGGGCGGCTGCTaGCATCGGATACCAAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LPPDTGLEGAADRQGSSRDKGGC*HRIPSI Trigger: TATACTTGGTATCCGATGGCAGCAGCCGCCCTTATC...CCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGGTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | TACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCCGAGCACCTCTGCTaGGCTGACTTGGCAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTHRDTQPCLPPDTGLEGAEHLC*ADLASG Trigger: TCCGCTTGCCAAGTCAGCCCAGCAGAGGTGCTCGGC...TCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTATGATTCGCAGGGACTaGCGCATCTCCTCCACACGA | + |
|
Preference number: 4 (lower is better) Translates to: TQASKEQLTGKAARGWCFMIRRD*RISSTR Trigger: TCGTGTGGAGGAGATGCGCCAGTCCCTGCGAATCAT...AAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | CTCCCACCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGAGTATATGTGGCTCCTaGAGGAACTTGGTAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPDTGLEGAADRQGSSRSICGS*RNLVAL Trigger: GAGGGCTACCAAGTTCCTCCAGGAGCCACATATACT...CCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGGTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | CCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGAGTATATGTGGCTCCTaGAGGAACTTGGTAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PDTGLEGAADRQGSSRVVSICGS*RNLVAL Trigger: GAGGGCTACCAAGTTCCTCCAGGAGCCACATATACT...CACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR TCA 90 bp | TACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGATGCAGGAGCCCGATGTaGGGGTCACATTTCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: YTHRDTQPCLPPDTGLEGCRSPM*GSHFRT Trigger: GGTGCGGAAATGTGACCCTCACATCGGGCTCCTGCA...TCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | GTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACGTGCACGTTTGTTTACCGTGGGCTGCTGGGTaGTGGGGCCCAAAGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VHAQKACAAKCEHVHVCLPWAAG*WGPKFR Trigger: CCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGG...TAAACAAACGTGCACGTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | ACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCACTCGGATCCACTGTaGCCGAGGAGGAGGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: THTETHSLVSHQTQASKEHSDPL*PRRRLD Trigger: ATCCAACCTCCTCCTCGGGCACAGTGGATCCGAGTG...CTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR TCA 90 bp | ACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCATCAGACACTGCTCAATaGTTCGCAGGGACTGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: THRDTQPCLPPDTGLEGASDTAQ*FAGTGA Trigger: TGCGCCAGTCCCTGCGAATCATTGAGCAGTGTCTGA...TGCTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR TCA 90 bp | TACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGATGGCGTCATCAACCTTaGTCTCCCCGGGAGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: YTHRDTQPCLPPDTGLEGWRHQP*SPREAS Trigger: AGATGCCTCCCGGGGAGATCAAGGTTGATGACGCCA...TCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | ATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACCCGTGGGCTGCTGGGTaGTGGGGCCCAAAGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSPFLVHAQKACAAKCEHPWAAG*WGPKFR Trigger: CCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGG...GTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | ATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACCAGGACTCCGTGGGCTaGTGGGTGCTGGGGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MSPFLVHAQKACAAKCEHQDSVG*WVLGPK Trigger: TTTGGGCCCCAGCACCCAGCAGCCCACGGAGTCCTG...GTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | ACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTGATGGCCACGACATCTaGCAACATGTGTCCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQASKEQLTGKAARGWCFDGHDI*QHVSLR Trigger: TCTAAGGGACACATGTTGGCAGATGTCGTGGCCATC...AAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | GTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACGTGCACGTTTGTTTAGCCGAGCACCTCTGCTaGGCTGACTTGGCAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHAQKACAAKCEHVHVCLAEHLC*ADLASG Trigger: TCCGCTTGCCAAGTCAGCCCAGCAGAGGTGCTCGGC...TAAACAAACGTGCACGTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGCAATGGCAGTATATGTaGCTCCTGGAGGAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGLEGAADRQGSSRVVLSQWQYM*LLEELG Trigger: ACCAAGTTCCTCCAGGAGCCACATATACTGCCATTG...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGGCCAGATTCTATTGTTaGTCAGCATCTGGTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: TGLEGAADRQGSSRVVLSARFYC*SASGAL Trigger: GAGTGCACCAGATGCTGACCAACAATAGAATCTGGC...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111318.8 |
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| CDS-3UTR TCA 90 bp | TACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGACCTTGGAGGGGTACATaGCAGCTCCCGAAAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: YTHRDTQPCLPPDTGLEGPWRGT*QLPKTA Trigger: AGCAGTTTTCGGGAGCTGTCATGTACCCCTCCAAGG...TCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR TCA 90 bp | ACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCATATCCTGGGTACCTATaGTGGCCACGACATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: THRDTQPCLPPDTGLEGAYPGYL*WPRHLP Trigger: TGGCAGATGTCGTGGCCATCATAGGTACCCAGGATA...TGCTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | CCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGGAATCCATAGTTAAGTaGGTCTTCCGCTGTTACAAC | + |
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Preference number: 4 (lower is better) Translates to: PDTGLEGAADRQGSSRVVESIVK*VFRCYN Trigger: GTTGTAACAGCGGAAGACGCACTTAACTATGGATTC...CACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | TACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAACCGATAAGGGCGGCTaGTGCCATCGGATACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YTHRDTQPCLPPDTGLEGTDKGG*CHRIPS Trigger: ACTTGGTATCCGATGGCAGCAGCCGCCCTTATCGGT...TCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | TACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGATGCCCATTCAATATCTaGCTGCCACTGCCGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: YTHRDTQPCLPPDTGLEGCPFNI*LPLPST Trigger: GGTGCTCGGCAGTGGCAGCCAGATATTGAATGGGCA...TCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR GCA 90 bp | ACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCAGATGGCCACGACATCTaGCAACATGTGTCCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: THRDTQPCLPPDTGLEGADGHDI*QHVSLR Trigger: TCTAAGGGACACATGTTGGCAGATGTCGTGGCCATC...TGCTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ATAATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGAGTCTCAGGACTCCGTaGGCTGCTGGGTGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IMSPFLVHAQKACAAKCESLRTP*AAGCWG Trigger: GCCCCAGCACCCAGCAGCCCACGGAGTCCTGAGACT...CTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCAAGAAGAAAGGAGTCATaGCACCGATGTCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: THRDTQPCLPPDTGLEGARRKES*HRCPGH Trigger: ATGCCCTGGACATCGGTGCCATGACTCCTTTCTTCT...TGCTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGAGAAGAAAGGAGTCATaGCACCGATGTCCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: THTETHSLVSHQTQASKERRKES*HRCPGH Trigger: ATGCCCTGGACATCGGTGCCATGACTCCTTTCTTCT...CTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS-3UTR CCA 90 bp | ATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACGGAGGAGGTTTCCAGTaGGCTGTTTCCTTGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MSPFLVHAQKACAAKCEHGGGFQ*AVSLEG Trigger: CCCCTCCAAGGAAACAGCCCACTGGAAACCTCCTCC...GTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | ATAATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGTGGGCTGCTGGGTGCTaGGGCCCAAAGTTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IMSPFLVHAQKACAAKCEWAAGC*GPKFRV Trigger: GACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCA...CTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTGTTCATTACACATCATaGACACATAGTCCAACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQASKEQLTGKAARGWCFVHYTS*THSPTG Trigger: ACCGGTTGGACTATGTGTCCATGATGTGTAATGAAC...AAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACCTCTGCTCGCTTCGGTaGGGACACTTTGGCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: MSPFLVHAQKACAAKCEHLCSLR*GHFGVI Trigger: GATGACGCCAAAGTGTCCCCACCGAAGCGAGCAGAG...GTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | ACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCACAATGGCAGTATATGTaGCTCCTGGAGGAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: THRDTQPCLPPDTGLEGAQWQYM*LLEELG Trigger: ACCAAGTTCCTCCAGGAGCCACATATACTGCCATTG...TGCTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACCCTTGGAGGGGTACATaGCAGCTCCCGAAAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSPFLVHAQKACAAKCEHPWRGT*QLPKTA Trigger: AGCAGTTTTCGGGAGCTGTCATGTACCCCTCCAAGG...GTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | GTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACGTGCACGTTTGTTTAGCCCGAGGAGGAGGTTaGATGTTTAGCAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHAQKACAAKCEHVHVCLARGGG*MFSNFS Trigger: GGAGAAGTTGCTAAACATCCAACCTCCTCCTCGGGC...TAAACAAACGTGCACGTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTGTGACAGCCATGATATaGTTTAAAATCCGTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TQASKEQLTGKAARGWCFVTAMI*FKIRVI Trigger: GATCACACGGATTTTAAACCATATCATGGCTGTCAC...AAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACATGATTCGCAGGGACTaGCGCATCTCCTCCACACGA | + |
|
Preference number: 4 (lower is better) Translates to: MSPFLVHAQKACAAKCEHMIRRD*RISSTR Trigger: TCGTGTGGAGGAGATGCGCCAGTCCCTGCGAATCAT...GTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR TCA 90 bp | ATAATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGTGGCGTCATCAACCTTaGTCTCCCCGGGAGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IMSPFLVHAQKACAAKCEWRHQP*SPREAS Trigger: AGATGCCTCCCGGGGAGATCAAGGTTGATGACGCCA...CTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR GCA 90 bp | ACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCAGAATCCATAGTTAAGTaGGTCTTCCGCTGTTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: THRDTQPCLPPDTGLEGAESIVK*VFRCYN Trigger: GTTGTAACAGCGGAAGACGCACTTAACTATGGATTC...TGCTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACGATAAGGGCGGCTGCTaGCATCGGATACCAAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: MSPFLVHAQKACAAKCEHDKGGC*HRIPSI Trigger: TATACTTGGTATCCGATGGCAGCAGCCGCCCTTATC...GTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR GCA 90 bp | ATAATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGACCGATAAGGGCGGCTaGTGCCATCGGATACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IMSPFLVHAQKACAAKCETDKGG*CHRIPS Trigger: ACTTGGTATCCGATGGCAGCAGCCGCCCTTATCGGT...CTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | ACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCAGTGACAGCCATGATATaGTTTAAAATCCGTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: THRDTQPCLPPDTGLEGAVTAMI*FKIRVI Trigger: GATCACACGGATTTTAAACCATATCATGGCTGTCAC...TGCTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR TCA 90 bp | ATAATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGTATCCTGGGTACCTATaGTGGCCACGACATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IMSPFLVHAQKACAAKCEYPGYL*WPRHLP Trigger: TGGCAGATGTCGTGGCCATCATAGGTACCCAGGATA...CTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | ATAATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCAACCGGTCAAAGTATaGAAGGGCCTGCAGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IMSPFLVHAQKACAAKCEQPVKV*KGLQIG Trigger: ACCTATCTGCAGGCCCTTCCATACTTTGACCGGTTG...CTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACGTTCATTACACATCATaGACACATAGTCCAACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSPFLVHAQKACAAKCEHVHYTS*THSPTG Trigger: ACCGGTTGGACTATGTGTCCATGATGTGTAATGAAC...GTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS GCA 90 bp | ACTGCTCTGCCCATTCAATATCTGGCTGCCACTGCCGAGCACCTCTaGTGGGCTGACTTGGCAAGCGGATCCCAGACCCGGGCCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TALPIQYLAATAEHL*WADLASGSQTRAAA Trigger: TGCTGCGGCCCGGGTCTGGGATCCGCTTGCCAAGTCAGCCCAGCAGAGGTGCTCGGCAGTGGCAGCCAGATATTGAATGGGCAGAGCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGCTCTGCTGGGCTGACTaGGCAAGCGGATCCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TGLEGAADRQGSSRVVLSLCWAD*ASGSQT Trigger: GGTCTGGGATCCGCTTGCCAAGTCAGCCCAGCAGAG...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS GCA 90 bp | CATCTCTCCACTCAGTTCCAGCACGAGTCTCAGGACTCCGTGGGCTaGTGGGTGCTGGGGCCCAAAGTTCAGGGTCATGTTGGTCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: HLSTQFQHESQDSVG*WVLGPKVQGHVGHR Trigger: GCGGTGACCAACATGACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGGAGTCCTGAGACTCGTGCTGGAACTGAGTGGAGAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
||
| CDS CCA 90 bp | CGCACCATCTCTCCACTCAGTTCCAGCACGAGTCTCAGGACTCCGTaGGCTGCTGGGTGCTGGGGCCCAAAGTTCAGGGTCATGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RTISPLSSSTSLRTP*AAGCWGPKFRVMLV Trigger: GACCAACATGACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGGAGTCCTGAGACTCGTGCTGGAACTGAGTGGAGAGATGGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
||
| CDS-3UTR CAA 90 bp | CCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCAGTGGGCTGTTTCCTaGGAGGGGTACATGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PDTGLEGAADRQGSSRVVQWAVS*EGYMTA Trigger: AGCTGTCATGTACCCCTCCAAGGAAACAGCCCACTG...CACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS CCA 90 bp | CTCTCCACTCAGTTCCAGCACGAGTCTCAGGACTCCGTGGGCTGCTaGGTGCTGGGGCCCAAAGTTCAGGGTCATGTTGGTCACCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSTQFQHESQDSVGC*VLGPKVQGHVGHRF Trigger: AAAGCGGTGACCAACATGACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGGAGTCCTGAGACTCGTGCTGGAACTGAGTGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
||
| CDS-3UTR CAA 90 bp | CCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGTTCGGTGGGGACACTTaGGCGTCATCAACCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PDTGLEGAADRQGSSRVVFGGDT*ASSTLI Trigger: GATCAAGGTTGATGACGCCAAAGTGTCCCCACCGAA...CACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGGGCTCCTGGAGGAACTaGGTAGCCCTCTGTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: TGLEGAADRQGSSRVVLSGSWRN*VALCIQ Trigger: CTGTATACAGAGGGCTACCAAGTTCCTCCAGGAGCC...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | CCAGACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGTGTCCCTTAGACATCTaGTCCAAACCAGCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDTGLEGAADRQGSSRVVCPLDI*SKPARW Trigger: CCACCTGGCTGGTTTGGACAAGATGTCTAAGGGACA...CACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTCGTTCGGTGGGGACACTTaGGCGTCATCAACCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: TGLEGAADRQGSSRVVLSFGGDT*ASSTLI Trigger: GATCAAGGTTGATGACGCCAAAGTGTCCCCACCGAA...CGAAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGGCCTCGAAGGAGCAGCTGACAGGCAAGGCAGCTCGAGGGTGGTGCTTTTGTCCCTTAGACATCTaGTCCAAACCAGCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TQASKEQLTGKAARGWCFCPLDI*SKPARW Trigger: CCACCTGGCTGGTTTGGACAAGATGTCTAAGGGACA...AAAGCACCACCCTCGAGCTGCCTTGCCTGTCAGCTGCTCCTTCGAGGCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS TCA 90 bp | TTGTACTCAATGAGCTTCTCCGTGCCTCGGTGCAGGAGCCCGATGTaGGGGTCACATTTCCGCACCATCTCTCCACTCAGTTCCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LYSMSFSVPRCRSPM*GSHFRTISPLSSST Trigger: CGTGCTGGAACTGAGTGGAGAGATGGTGCGGAAATGTGACCCTCACATCGGGCTCCTGCACCGAGGCACGGAGAAGCTCATTGAGTACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000191871.2 ENSMUST00000194778.6 |
||
| CDS TCA 90 bp | ACCGGTCAAAGTATGGAAGGGCCTGCAGATAGGTCTTGTACTCAATaGGCTTCTCCGTGCCTCGGTGCAGGAGCCCGATGTGAGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGQSMEGPADRSCTQ*ASPCLGAGARCEGH Trigger: GTGACCCTCACATCGGGCTCCTGCACCGAGGCACGGAGAAGCTCATTGAGTACAAGACCTATCTGCAGGCCCTTCCATACTTTGACCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000191871.2 ENSMUST00000194778.6 |
||
| CDS GCA 90 bp | GCGTCATCAACCTTGATCTCCCCGGGAGGCATCTTGTTCAGACACTaGTCAATGATTCGCAGGGACTGGCGCATCTCCTCCACACGACAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSTLISPGGILFRH*SMIRRDWRISSTRH Trigger: GTGTCGTGTGGAGGAGATGCGCCAGTCCCTGCGAATCATTGAGCAGTGTCTGAACAAGATGCCTCCCGGGGAGATCAAGGTTGATGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS GCA 90 bp | TCGACTGTCCTATTTCGCCAGATTCTATTGTTGGTCAGCATCTGGTaGACTCCTCCAGGTCGGATATACGCCGCGTGCATCCGGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: STVLFRQILLLVSIW*TPPGRIYAACIRAP Trigger: TGGGGCCCGGATGCACGCGGCGTATATCCGACCTGGAGGAGTGCACCAGATGCTGACCAACAATAGAATCTGGCGAAATAGGACAGTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | ACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGCAGTGGGCTGTTTCCTaGGAGGGGTACATGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: THTETHSLVSHQTQASKEQWAVS*EGYMTA Trigger: AGCTGTCATGTACCCCTCCAAGGAAACAGCCCACTG...CTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | ACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGAGGGCTCCTGGAGGAACTaGGTAGCCCTCTGTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: THTETHSLVSHQTQASKEGSWRN*VALCIQ Trigger: CTGTATACAGAGGGCTACCAAGTTCCTCCAGGAGCC...CTCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS TCA 90 bp | GTAAACGTCATAGGGCTGGGTCTTCCGCAAGTCCCACTGGATGCCTaGGCCTCGGAGCATCACCCCACTGAATCCATAGTTAAGTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VNVIGLGLPQVPLDA*ASEHHPTESIVKCV Trigger: GACGCACTTAACTATGGATTCAGTGGGGTGATGCTCCGAGGCTCAGGCATCCAGTGGGACTTGCGGAAGACCCAGCCCTATGACGTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | TACACACACAGAGACACACAGCCTTGTCTCCCACCAGACACAGGCCTCGAAGGATCCCCGGGAGGCATCTaGTTCAGACACTGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: YTHRDTQPCLPPDTGLEGSPGGI*FRHCSM Trigger: CATTGAGCAGTGTCTGAACAAGATGCCTCCCGGGGA...TCCTTCGAGGCCTGTGTCTGGTGGGAGACAAGGCTGTGTGTCTCTGTGTGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | ATAATGTCTCCTTTTCTAGTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCTCTGCTGGGCTGACTaGGCAAGCGGATCCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: IMSPFLVHAQKACAAKCELCWAD*ASGSQT Trigger: GGTCTGGGATCCGCTTGCCAAGTCAGCCCAGCAGAG...CTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAACTAGAAAAGGAGACATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS-3UTR CAA 90 bp | GTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACGTGCACGTTTGTTTATTTCGCCAGATTCTATaGTTGGTCAGCATCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VHAQKACAAKCEHVHVCLFRQIL*LVSISS Trigger: GGAGGAGATGCTGACCAACAATAGAATCTGGCGAAA...TAAACAAACGTGCACGTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013737.13 |
||
| CDS-3UTR CAA 90 bp | GTTCATGCACAGAAAGCCTGCGCAGCTAAGTGCGAGCACGTGCACGTTTGTTTATTTCGCCAGATTCTATaGTTGGTCAGCATCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VHAQKACAAKCEHVHVCLFRQIL*LVSIWC Trigger: GCACCAGATGCTGACCAACAATAGAATCTGGCGAAA...TAAACAAACGTGCACGTGCTCGCACTTAGCTGCGCAGGCTTTCTGTGCATGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111318.8 |
||
| CDS CCA 90 bp | CCCAAACTCTCCCTTAGGAGCTTCAATGGCAGTATATGTGGCTCCTaGAGGAACTTGGTAGCCCTCTGTATACAGCTTAAAGTGATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PKLSLRSFNGSICGS*RNLVALCIQLKVMN Trigger: ATTCATCACTTTAAGCTGTATACAGAGGGCTACCAAGTTCCTCCAGGAGCCACATATACTGCCATTGAAGCTCCTAAGGGAGAGTTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS CCA 72 bp | TGGCTGCCACTGCCGAGCACCTCTGCTGGGCTGACTTaGCAAGCGGATCCCAGACCCGGGCCGCAGCACCGG | + |
|
Preference number: 6 (lower is better) Translates to: WLPLPSTSAGLT*QADPRPGPQHR Trigger: CCGGTGCTGCGGCCCGGGTCTGGGATCCGCTTGCCAAGTCAGCCCAGCAGAGGTGCTCGGCAGTGGCAGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
||
| CDS CCA 72 bp | AGCACGAGTCTCAGGACTCCGTGGGCTGCTGGGTGCTaGGGCCCAAAGTTCAGGGTCATGTTGGTCACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: STSLRTPWAAGC*GPKFRVMLVTA Trigger: AGCGGTGACCAACATGACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGGAGTCCTGAGACTCGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
||
| CDS CCA 72 bp | TCTCCACTCAGTTCCAGCACGAGTCTCAGGACTCCGTaGGCTGCTGGGTGCTGGGGCCCAAAGTTCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SPLSSSTSLRTP*AAGCWGPKFRV Trigger: GACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGGAGTCCTGAGACTCGTGCTGGAACTGAGTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000191871.2 ENSMUST00000194778.6 |
||
| CDS CCA 72 bp | CAGTTCCAGCACGAGTCTCAGGACTCCGTGGGCTGCTaGGTGCTGGGGCCCAAAGTTCAGGGTCATGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QFQHESQDSVGC*VLGPKVQGHVG Trigger: ACCAACATGACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGGAGTCCTGAGACTCGTGCTGGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
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| CDS TCA 72 bp | TGTCCAAACCAGCCAGGTGGGCAAAACCGGGAGCCTTaGTCTTACACCGATAAGGGCGGCTGCTGCCATCGG | + |
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Preference number: 6 (lower is better) Translates to: CPNQPGGQNREP*SYTDKGGCCHR Trigger: CCGATGGCAGCAGCCGCCCTTATCGGTGTAAGATCAAGGCTCCCGGTTTTGCCCACCTGGCTGGTTTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS GCA 72 bp | ACTCAGTTCCAGCACGAGTCTCAGGACTCCGTGGGCTaGTGGGTGCTGGGGCCCAAAGTTCAGGGTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: TQFQHESQDSVG*WVLGPKVQGHV Trigger: AACATGACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGGAGTCCTGAGACTCGTGCTGGAACTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
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| CDS TCA 72 bp | ATGAGCTTCTCCGTGCCTCGGTGCAGGAGCCCGATGTaGGGGTCACATTTCCGCACCATCTCTCCACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: MSFSVPRCRSPM*GSHFRTISPLS Trigger: ACTGAGTGGAGAGATGGTGCGGAAATGTGACCCTCACATCGGGCTCCTGCACCGAGGCACGGAGAAGCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000191871.2 ENSMUST00000194778.6 |
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| CDS TCA 72 bp | TCTCCCCGGGAGGCATCTTGTTCAGACACTGCTCAATaGTTCGCAGGGACTGGCGCATCTCCTCCACACGAC | + |
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Preference number: 6 (lower is better) Translates to: SPREASCSDTAQ*FAGTGASPPHD Trigger: GTCGTGTGGAGGAGATGCGCCAGTCCCTGCGAATCATTGAGCAGTGTCTGAACAAGATGCCTCCCGGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS CAA 72 bp | GCTCGCTTCGGTGGGGACACTTTGGCGTCATCAACCTaGATCTCCCCGGGAGGCATCTTGTTCAGACACTGC | + |
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Preference number: 6 (lower is better) Translates to: ARFGGDTLASST*ISPGGILFRHC Trigger: GCAGTGTCTGAACAAGATGCCTCCCGGGGAGATCAAGGTTGATGACGCCAAAGTGTCCCCACCGAAGCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS CAA 72 bp | GACGTCTTCATCTCTGCTCGCTTCGGTGGGGACACTTaGGCGTCATCAACCTTGATCTCCCCGGGAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: DVFISARFGGDT*ASSTLISPGGI Trigger: GATGCCTCCCGGGGAGATCAAGGTTGATGACGCCAAAGTGTCCCCACCGAAGCGAGCAGAGATGAAGACGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS CAA 90 bp | GGGGACACTTTGGCGTCATCAACCTTGATCTCCCCGGGAGGCATCTaGTTCAGACACTGCTCAATGATTCGCAGGGACTGGCGCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: GDTLASSTLISPGGI*FRHCSMIRRDWRIS Trigger: GGAGATGCGCCAGTCCCTGCGAATCATTGAGCAGTGTCTGAACAAGATGCCTCCCGGGGAGATCAAGGTTGATGACGCCAAAGTGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS TCA 72 bp | ATAGGGCTGGGTCTTCCGCAAGTCCCACTGGATGCCTaGGCCTCGGAGCATCACCCCACTGAATCCATAGTT | + |
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Preference number: 6 (lower is better) Translates to: IGLGLPQVPLDA*ASEHHPTESIV Trigger: AACTATGGATTCAGTGGGGTGATGCTCCGAGGCTCAGGCATCCAGTGGGACTTGCGGAAGACCCAGCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS TCA 72 bp | CTCGCTTCGGTGGGGACACTTTGGCGTCATCAACCTTaGTCTCCCCGGGAGGCATCTTGTTCAGACACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LASVGTLWRHQP*SPREASCSDTA Trigger: AGCAGTGTCTGAACAAGATGCCTCCCGGGGAGATCAAGGTTGATGACGCCAAAGTGTCCCCACCGAAGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS GCA 72 bp | CTTGGAGGGGTACATGACAGCTCCCGAAAACTGCTCTaGCCATTCAATATCTGGCTGCCACTGCCGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: LGGVHDSSRKLL*PFNIWLPLPST Trigger: GGTGCTCGGCAGTGGCAGCCAGATATTGAATGGGCAGAGCAGTTTTCGGGAGCTGTCATGTACCCCTCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
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| CDS GCA 72 bp | ACCTTGATCTCCCCGGGAGGCATCTTGTTCAGACACTaGTCAATGATTCGCAGGGACTGGCGCATCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TLISPGGILFRH*SMIRRDWRISS Trigger: GGAGGAGATGCGCCAGTCCCTGCGAATCATTGAGCAGTGTCTGAACAAGATGCCTCCCGGGGAGATCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS CAA 72 bp | GCCACGACATCTGCCAACATGTGTCCCTTAGACATCTaGTCCAAACCAGCCAGGTGGGCAAAACCGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: ATTSANMCPLDI*SKPARWAKPGA Trigger: GGCTCCCGGTTTTGCCCACCTGGCTGGTTTGGACAAGATGTCTAAGGGACACATGTTGGCAGATGTCGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS CAA 90 bp | GACTCCATGGACGTCTTCATCTCTGCTCGCTTCGGTGGGGACACTTaGGCGTCATCAACCTTGATCTCCCCGGGAGGCATCTTGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DSMDVFISARFGGDT*ASSTLISPGGILFR Trigger: TCTGAACAAGATGCCTCCCGGGGAGATCAAGGTTGATGACGCCAAAGTGTCCCCACCGAAGCGAGCAGAGATGAAGACGTCCATGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS TCA 72 bp | AGTATGGAAGGGCCTGCAGATAGGTCTTGTACTCAATaGGCTTCTCCGTGCCTCGGTGCAGGAGCCCGATGT | + |
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Preference number: 6 (lower is better) Translates to: SMEGPADRSCTQ*ASPCLGAGARC Trigger: ACATCGGGCTCCTGCACCGAGGCACGGAGAAGCTCATTGAGTACAAGACCTATCTGCAGGCCCTTCCATACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000191871.2 ENSMUST00000194778.6 |
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| CDS GCA 72 bp | GTTTCCTTGGAGGGGTACATGACAGCTCCCGAAAACTaGTCTGCCCATTCAATATCTGGCTGCCACTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: VSLEGYMTAPEN*SAHSISGCHCR Trigger: TCGGCAGTGGCAGCCAGATATTGAATGGGCAGAGCAGTTTTCGGGAGCTGTCATGTACCCCTCCAAGGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
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| CDS CAA 72 bp | TTGGCGTCATCAACCTTGATCTCCCCGGGAGGCATCTaGTTCAGACACTGCTCAATGATTCGCAGGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: LASSTLISPGGI*FRHCSMIRRDW Trigger: CCAGTCCCTGCGAATCATTGAGCAGTGTCTGAACAAGATGCCTCCCGGGGAGATCAAGGTTGATGACGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS GCA 72 bp | GCCTCGGAGCATCACCCCACTGAATCCATAGTTAAGTaGGTCTTCCGCTGTTACAACCCCAATGTCGACTGT | + |
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Preference number: 6 (lower is better) Translates to: ASEHHPTESIVK*VFRCYNPNVDC Trigger: ACAGTCGACATTGGGGTTGTAACAGCGGAAGACGCACTTAACTATGGATTCAGTGGGGTGATGCTCCGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS GCA 72 bp | CTATTTCGCCAGATTCTATTGTTGGTCAGCATCTGGTaGACTCCTCCAGGTCGGATATACGCCGCGTGCATC | + |
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Preference number: 6 (lower is better) Translates to: LFRQILLLVSIW*TPPGRIYAACI Trigger: GATGCACGCGGCGTATATCCGACCTGGAGGAGTGCACCAGATGCTGACCAACAATAGAATCTGGCGAAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111318.8 |
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| CDS CCA 72 bp | ATCTTGTTCAGACACTGCTCAATGATTCGCAGGGACTaGCGCATCTCCTCCACACGACACAGGTACCTATCG | + |
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Preference number: 6 (lower is better) Translates to: ILFRHCSMIRRD*RISSTRHRYLS Trigger: CGATAGGTACCTGTGTCGTGTGGAGGAGATGCGCCAGTCCCTGCGAATCATTGAGCAGTGTCTGAACAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS CAA 72 bp | TCATTCCAAGGAGGAGGTTTCCAGTGGGCTGTTTCCTaGGAGGGGTACATGACAGCTCCCGAAAACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SFQGGGFQWAVS*EGYMTAPENCS Trigger: AGAGCAGTTTTCGGGAGCTGTCATGTACCCCTCCAAGGAAACAGCCCACTGGAAACCTCCTCCTTGGAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
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| CDS CAA 90 bp | ATGTCCACATCATTCCAAGGAGGAGGTTTCCAGTGGGCTGTTTCCTaGGAGGGGTACATGACAGCTCCCGAAAACTGCTCTGCCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: MSTSFQGGGFQWAVS*EGYMTAPENCSAHS Trigger: TGAATGGGCAGAGCAGTTTTCGGGAGCTGTCATGTACCCCTCCAAGGAAACAGCCCACTGGAAACCTCCTCCTTGGAATGATGTGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
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| CDS CAA 90 bp | TTCATCTCTGCTCGCTTCGGTGGGGACACTTTGGCGTCATCAACCTaGATCTCCCCGGGAGGCATCTTGTTCAGACACTGCTCAATGATT | + |
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Preference number: 6 (lower is better) Translates to: FISARFGGDTLASST*ISPGGILFRHCSMI Trigger: AATCATTGAGCAGTGTCTGAACAAGATGCCTCCCGGGGAGATCAAGGTTGATGACGCCAAAGTGTCCCCACCGAAGCGAGCAGAGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS CCA 72 bp | AAAATGTCCACATCATTCCAAGGAGGAGGTTTCCAGTaGGCTGTTTCCTTGGAGGGGTACATGACAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: KMSTSFQGGGFQ*AVSLEGYMTAP Trigger: GGGAGCTGTCATGTACCCCTCCAAGGAAACAGCCCACTGGAAACCTCCTCCTTGGAATGATGTGGACATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000194778.6 |
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| CDS GCA 72 bp | CACAATATCCTGGGTACCTATGATGGCCACGACATCTaGCAACATGTGTCCCTTAGACATCTTGTCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: HNILGTYDGHDI*QHVSLRHLVQT Trigger: GGTTTGGACAAGATGTCTAAGGGACACATGTTGGCAGATGTCGTGGCCATCATAGGTACCCAGGATATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS CCA 72 bp | CCGATGTCCAGGGCATGTGTGGTGACAGCCATGATATaGTTTAAAATCCGTGTGATCTCTCCAAAGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: PMSRACVVTAMI*FKIRVISPKST Trigger: AGTGCTCTTTGGAGAGATCACACGGATTTTAAACCATATCATGGCTGTCACCACACATGCCCTGGACATCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000191871.2 ENSMUST00000194778.6 |
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| CDS CCA 72 bp | CCACAGCTATCGAATAGGCCTGTTCATTACACATCATaGACACATAGTCCAACCGGTCAAAGTATGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: PQLSNRPVHYTS*THSPTGQSMEG Trigger: CCCTTCCATACTTTGACCGGTTGGACTATGTGTCCATGATGTGTAATGAACAGGCCTATTCGATAGCTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 ENSMUST00000191871.2 ENSMUST00000194778.6 |
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| CDS CCA 72 bp | CAATGTCGACTGTCCTATTTCGCCAGATTCTATTGTTaGTCAGCATCTCCTCCACCTCATCAATCCGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: QCRLSYFARFYC*SASPPPHQSEE Trigger: CTCTTCGGATTGATGAGGTGGAGGAGATGCTGACCAACAATAGAATCTGGCGAAATAGGACAGTCGACATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013737.13 |
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| CDS CCA 72 bp | TCCCTTAGGAGCTTCAATGGCAGTATATGTGGCTCCTaGAGGAACTTGGTAGCCCTCTGTATACAGCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: SLRSFNGSICGS*RNLVALCIQLK Trigger: TTTAAGCTGTATACAGAGGGCTACCAAGTTCCTCCAGGAGCCACATATACTGCCATTGAAGCTCCTAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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| CDS CAA 72 bp | CCAATGTCGACTGTCCTATTTCGCCAGATTCTATTGTaGGTCAGCATCTCCTCCACCTCATCAATCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PMSTVLFRQILL*VSISSTSSIRR Trigger: TCTTCGGATTGATGAGGTGGAGGAGATGCTGACCAACAATAGAATCTGGCGAAATAGGACAGTCGACATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013737.13 |
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| CDS CAA 72 bp | AGCTTCAATGGCAGTATATGTGGCTCCTGGAGGAACTaGGTAGCCCTCTGTATACAGCTTAAAGTGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: SFNGSICGSWRN*VALCIQLKVMN Trigger: ATTCATCACTTTAAGCTGTATACAGAGGGCTACCAAGTTCCTCCAGGAGCCACATATACTGCCATTGAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013737.13 ENSMUST00000111318.8 |
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