Pregenerated sensors for NDUFS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025968Ensembl transcript IDs: ENSMUST00000027111.15, ENSMUST00000168099.9, ENSMUST00000185412.7, ENSMUST00000185732.7, ENSMUST00000185847.2, ENSMUST00000187756.7, ENSMUST00000188370.7
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGGGTCCCTGTTAGATGTCTCAGCATATGGACGGCTCCTCTACTaGCTGAGCGCCCTCGGTGACAGCTTTGACACACTTGGCCATTGT | + |
|
Preference number: 1 (lower is better) Translates to: KGSLLDVSAYGRLLY*LSALGDSFDTLGHC Trigger: ACAATGGCCAAGTGTGTCAAAGCTGTCACCGAGGGCGCTCAGGCAGTAGAGGAGCCGTCCATATGCTGAGACATCTAACAGGGACCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187756.7 |
||
| 3UTR TCA 90 bp | CTGAGCGCCCTCGGTGACAGCTTTGACACACTTGGCCATTGTCTGTaGGGCTCTGCTAATGGAGTCTTTATCAACTGTTGTCAAAGTTAT | + |
|
Preference number: 1 (lower is better) Translates to: LSALGDSFDTLGHCL*GSANGVFINCCQSY Trigger: ATAACTTTGACAACAGTTGATAAAGACTCCATTAGCAGAGCCTCACAGACAATGGCCAAGTGTGTCAAAGCTGTCACCGAGGGCGCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187756.7 |
||
| 3UTR GCA 72 bp | CTGTTAGATGTCTCAGCATATGGACGGCTCCTCTACTaGCTGAGCGCCCTCGGTGACAGCTTTGACACACTT | + |
|
Preference number: 3 (lower is better) Translates to: LLDVSAYGRLLY*LSALGDSFDTL Trigger: AAGTGTGTCAAAGCTGTCACCGAGGGCGCTCAGGCAGTAGAGGAGCCGTCCATATGCTGAGACATCTAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187756.7 |
||
| 3UTR TCA 72 bp | CTCGGTGACAGCTTTGACACACTTGGCCATTGTCTGTaGGGCTCTGCTAATGGAGTCTTTATCAACTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LGDSFDTLGHCL*GSANGVFINCC Trigger: ACAACAGTTGATAAAGACTCCATTAGCAGAGCCTCACAGACAATGGCCAAGTGTGTCAAAGCTGTCACCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187756.7 |
||
| CDS-3UTR TCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGGCTCCTCTACTGCCTaGGCGCCCTCGGTGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPGSSTA*APSVTA Trigger: AGCTGTCACCGAGGGCGCTCAGGCAGTAGAGGAGCC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | GCCATTGTCTGTGAGGCTCTGCTAATGGAGTCTTTATCAACTGTTGTCAAAGTTCTGAGGTGGAACGAGTaGGTCAGCAAGAACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIVCEALLMESLSTVVKVLRWNE*VSKNLL Trigger: CAGGAGGTTCTTGCTGACCCACTCGTTCCACCTCAG...AACTTTGACAACAGTTGATAAAGACTCCATTAGCAGAGCCTCACAGACAATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187756.7 |
||
| CDS-3UTR TCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCGCAAGTCCTGTCGCGTaGTACAACCTCCATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSASPVA*YNLHLL Trigger: GAGCAGATGGAGGTTGTATCACGCGACAGGACTTGC...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGCAAGTCCTGTCGCGTaGTACAACCTCCATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPASPVA*YNLHLL Trigger: GAGCAGATGGAGGTTGTATCACGCGACAGGACTTGC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGCCAGGAGGCGTCACTaGTACTTTGGTTTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPARRRH*YFGLLS Trigger: GCTCAGCAAACCAAAGTAGCAGTGACGCCTCCTGGC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTCCAGTCTTCTCGTaGCAAGCCAGGAGGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPFPVFS*QARRRH Trigger: GTGACGCCTCCTGGCTTGGCACGAGAAGACTGGAAA...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGTAAGTGAGGTCCACTaGACTACCGATGAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPVSEVH*TTDEGH Trigger: GTGGCCCTCATCGGTAGTCCAGTGGACCTCACTTAC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCTGAGGTGGAACGAGTaGGTCAGCAAGAACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSLRWNE*VSKNLL Trigger: CAGGAGGTTCTTGCTGACCCACTCGTTCCACCTCAG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000187756.7 |
||
| CDS-3UTR TCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGGTCGTATCTGTAAGTaGGGTCCACTGGACTACCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPGRICK*GPLDYR Trigger: TCGGTAGTCCAGTGGACCTCACTTACAGATACGACC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCGGTCGTATCTGTAAGTaGGGTCCACTGGACTACCGA | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSGRICK*GPLDYR Trigger: TCGGTAGTCCAGTGGACCTCACTTACAGATACGACC...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCTTGGCCATTGTCTGTaGGGCTCTGCTAATGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSLGHCL*GSANGV Trigger: GACTCCATTAGCAGAGCCTCACAGACAATGGCCAAG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCATCCACCAAGCCTCCTaGAATCGCTGCCACAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSIHQAS*NRCHSI Trigger: AATGCTGTGGCAGCGATTGCAGGAGGCTTGGTGGAT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGCGTCACTGCTACTTTaGTTTGCTGAGCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPASLLL*FAELCP Trigger: AGGGCAGAGCTCAGCAAACCAAAGTAGCAGTGACGC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCCACTGGACTACCGATaGGGGCCACTTTTAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSPLDYR*GPLLSH Trigger: ATGACTTAAAAGTGGCCCTCATCGGTAGTCCAGTGG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGCTACTTTGGTTTGCTaGGCTCTGCCCTCAGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPATLVC*ALPSVL Trigger: CAATACTGAGGGCAGAGCTCAGCAAACCAAAGTAGC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCAGAATCGAGGGATTTaGATGCCGACCTTCTCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSQNRGI*MPTFSQ Trigger: TTGCGAGAAGGTCGGCATGCAAATCCCTCGATTCTG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACAGAATCGAGGGATTTaGATGCCGACCTTCTCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPQNRGI*MPTFSQ Trigger: TTGCGAGAAGGTCGGCATGCAAATCCCTCGATTCTG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATCCTGCAATCTCACTTaGAAACCTGATGCACCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPSCNLT*KPDAPG Trigger: ACCCGGTGCATCAGGTTTGCAAGTGAGATTGCAGGA...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACAGAACAGTGGTTCCTaGTTCCACCATGACAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPQNSGS*FHHDRL Trigger: CAGTCTGTCATGGTGGAACCAGGAACCACTGTTCTG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATACCAGCTCCTTCAGTaGGGAAGATCTCTTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPYQLLQ*GRSLQC Trigger: GCACTGAAGAGATCTTCCCCACTGAAGGAGCTGGTA...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTACCAGCTCCTTCAGTaGGGAAGATCTCTTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSYQLLQ*GRSLQC Trigger: GCACTGAAGAGATCTTCCCCACTGAAGGAGCTGGTA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCAGGGCAGATATCAATaGCATTCCCAGACAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSQGRYQ*HSQTVQ Trigger: CTGAACTGTCTGGGAATGTCATTGATATCTGCCCTG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCACTTCCAAACATCATaGACTGGTCCTGCAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSHFQTS*TGPADH Trigger: GTGATCTGCAGGACCAGTCCATGATGTTTGGAAGTG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGCTCCATCATCTCTCTaGAGTGCAGAACTGCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPAPSSL*SAELPK Trigger: TTTAGGCAGTTCTGCACTCCAGAGAGATGATGGAGC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCGCTCCATCATCTCTCTaGAGTGCAGAACTGCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSAPSSL*SAELPK Trigger: TTTAGGCAGTTCTGCACTCCAGAGAGATGATGGAGC...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTGTGTAAGCAGCCCCTaGGAGAATAACATCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSCVSSP*ENNISH Trigger: ATGGCTGATGTTATTCTCCCAGGGGCTGCTTACACA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACAGAGAGAGCTCTTATaGTTTTCCAGTCTTCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPQRELL*FSSLLV Trigger: CACGAGAAGACTGGAAAATCATAAGAGCTCTCTCTG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATCTTTTATAGTTAGCTaGGGTGGAACGAGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPSFIVS*GGTSGS Trigger: TGACCCACTCGTTCCACCTCAGCTAACTATAAAAGA...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000187756.7 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCAGTTACTTGCTGCTGTaGCAGTTGTGCGAACATATC | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSSYLLL*QLCEHI Trigger: GATATGTTCGCACAACTGGCACAGCAGCAAGTAACT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTTCAATCAAGTTACTTaGTGCTGTGCCAGTTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSFNQVT*CCASCA Trigger: CGCACAACTGGCACAGCAGCAAGTAACTTGATTGAA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTCAATCAAGTTACTTaGTGCTGTGCCAGTTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPFNQVT*CCASCA Trigger: CGCACAACTGGCACAGCAGCAAGTAACTTGATTGAA...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTCTGGAGTGCAGAACTaGCTAAAACCACCATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSSGVQN*LKPPLV Trigger: AACCAATGGTGGTTTTAGGCAGTTCTGCACTCCAGA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAAGCTACAAGAATTGCTaGTCCATCATCTCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPSYKNC*SIISLE Trigger: CTCCAGAGAGATGATGGAGCAGCAATTCTTGTAGCT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACACAGCTACAAGAATTaGTGCTCCATCATCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPHSYKN*CSIISL Trigger: CAGAGAGATGATGGAGCAGCAATTCTTGTAGCTGTG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCGATACAACCTCCATCTaGTCCCAGAAGAAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSDTTSI*SQKKQH Trigger: ATGCTGTTTCTTCTGGGAGCAGATGGAGGTTGTATC...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGATACAACCTCCATCTaGTCCCAGAAGAAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPDTTSI*SQKKQH Trigger: ATGCTGTTTCTTCTGGGAGCAGATGGAGGTTGTATC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTGGAAGAGTGATACCTaGAATCTCAGAGAGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSWKSDT*NLRESS Trigger: AGAGCTCTCTCTGAGATTGCAGGTATCACTCTTCCA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTCACATTCACCTCCCTaGTCACAAATAGGACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSSHSPP*SQIGQS Trigger: GGATTGTCCTATTTGTGACCAGGGAGGTGAATGTGA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCCAAACATCATGGACTaGTCCTGCAGATCACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSPNIMD*SCRSHS Trigger: TGAATGTGATCTGCAGGACCAGTCCATGATGTTTGG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGGACAATCCAATGGGTaGTTTGCTAATAAGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPGQSNG*FANKNS Trigger: GGAGTTCTTATTAGCAAATCACCCATTGGATTGTCC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCGGACAATCCAATGGGTaGTTTGCTAATAAGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSGQSNG*FANKNS Trigger: GGAGTTCTTATTAGCAAATCACCCATTGGATTGTCC...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTGTCATATGGAAGAGTaGTACCTGCAATCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSCHMEE*YLQSQR Trigger: TCTCTGAGATTGCAGGTATCACTCTTCCATATGACA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTCGCTGCCACAGCATTaGCTTCAAAATTCTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSSLPQH*LQNSVT Trigger: TGTTACAGAATTTTGAAGGCAATGCTGTGGCAGCGA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAAGCATTAAACAGCGGTaGCTCAAAACGTGGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPSIKQR*LKTWIC Trigger: ACAAATCCACGTTTTGAGGCACCGCTGTTTAATGCT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAAGCAGCTACCTGGCTTaGAATCCTATGCAGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPSSYLA*NPMQNI Trigger: AATATTCTGCATAGGATTGCAAGCCAGGTAGCTGCT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAAATGAAACAATCCTTTaGCAAGTCCTGTCGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPNETIL*QVLSRD Trigger: ATCACGCGACAGGACTTGCCAAAGGATTGTTTCATT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCAATGAAACAATCCTTTaGCAAGTCCTGTCGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSNETIL*QVLSRD Trigger: ATCACGCGACAGGACTTGCCAAAGGATTGTTTCATT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACAAATCATCTACTCCTaGAATCTCACTTGCAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPQIIYS*NLTCKP Trigger: AGGTTTGCAAGTGAGATTGCAGGAGTAGATGATTTG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCATGTATGTGCCAACTTaGATGTCATTTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSMYVPT*MSFPLP Trigger: AGGAAGAGGAAATGACATGCAAGTTGGCACATACAT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAATGTATGTGCCAACTTaGATGTCATTTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPMYVPT*MSFPLP Trigger: AGGAAGAGGAAATGACATGCAAGTTGGCACATACAT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGGAAGATCTCTTCAGTaGATAAGTTGTCAGAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPGRSLQ*ISCQSQ Trigger: TTGACTCTGACAACTTATGCACTGAAGAGATCTTCC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCGGAAGATCTCTTCAGTaGATAAGTTGTCAGAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSGRSLQ*ISCQSQ Trigger: TTGACTCTGACAACTTATGCACTGAAGAGATCTTCC...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTTCGTTTCTGACCATTaGTTCAGTAAGTCTTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSFVSDH*FSKSLT Trigger: CGTCAAAGACTTACTGAACCAATGGTCAGAAACGAA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTCGTTTCTGACCATTaGTTCAGTAAGTCTTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPFVSDH*FSKSLT Trigger: CGTCAAAGACTTACTGAACCAATGGTCAGAAACGAA...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAATCCAGAGTGTCATATaGAAGAGTGATACCTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPIQSVI*KSDTCN Trigger: ATTGCAGGTATCACTCTTCCATATGACACTCTGGAT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCATCCAGAGTGTCATATaGAAGAGTGATACCTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSIQSVI*KSDTCN Trigger: ATTGCAGGTATCACTCTTCCATATGACACTCTGGAT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACAGCAATTGTGGTATTaGGAAGATAATTGGAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPQQLWY*EDNWNV Trigger: TACGTTCCAATTATCTTCTCAATACCACAATTGCTG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR TCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAGTCCTTGATAAACAATaGAACAATCCTTTGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPVLDKQ*NNPLAS Trigger: ACTTGCCAAAGGATTGTTTCATTGTTTATCAAGGAC...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCAATGTTACTTCCCACTaGATCCATTACATCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSNVTSH*IHYING Trigger: TCCATTGATGTAATGGATGCAGTGGGAAGTAACATT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATGGCTTGCAATCCTATaGAGAATATTCATAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPWLAIL*RIFITF Trigger: GAAAGTTATGAATATTCTGCATAGGATTGCAAGCCA...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACATCCATTACATCAATaGACTCTGTCTTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPHPLHQ*TLSFLF Trigger: AAACAAGAAAGACAGAGTCCATTGATGTAATGGATG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACATCATAAGCAAACCTaGTTTTATCAGAGATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPHHKQT*FYQRSI Trigger: AATGGATCTCTGATAAAACCAGGTTTGCTTATGATG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 90 bp | CAGCAACAGACAACCTTTCATGGTAACAGAATCGAGGGATTTGCATaGCGACCTTCTCGCAAGCCTGCAGAACAGTGGTTCCTGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QQQTTFHGNRIEGFA*RPSRKPAEQWFLVP Trigger: TGGAACCAGGAACCACTGTTCTGCAGGCTTGCGAGAAGGTCGGCATGCAAATCCCTCGATTCTGTTACCATGAAAGGTTGTCTGTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185412.7 ENSMUST00000185732.7 ENSMUST00000188370.7 |
||
| CDS GCA 90 bp | ACCTGCAATCTCAGAGAGAGCTCTTATGATTTTCCAGTCTTCTCGTaGCAAGCCAGGAGGCGTCACTGCTACTTTGGTTTGCTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TCNLRESSYDFPVFS*QARRRHCYFGLLSS Trigger: AGAGCTCAGCAAACCAAAGTAGCAGTGACGCCTCCTGGCTTGGCACGAGAAGACTGGAAAATCATAAGAGCTCTCTCTGAGATTGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 90 bp | GAAACAATCCTTTGGCAAGTCCTGTCGCGTGATACAACCTCCATCTaGTCCCAGAAGAAACAGCATTTTGGGAGGGTTCTTCCTAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: ETILWQVLSRDTTSI*SQKKQHFGRVLPNR Trigger: GCGATTAGGAAGAACCCTCCCAAAATGCTGTTTCTTCTGGGAGCAGATGGAGGTTGTATCACGCGACAGGACTTGCCAAAGGATTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS TCA 90 bp | CGACCTTCTCGCAAGCCTGCAGAACAGTGGTTCCTGGTTCCACCATaGCAGACTGACCATCAACAAATACTTCAATCAAGTTACTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPSRKPAEQWFLVPP*QTDHQQILQSSYLL Trigger: CAGCAAGTAACTTGATTGAAGTATTTGTTGATGGTCAGTCTGTCATGGTGGAACCAGGAACCACTGTTCTGCAGGCTTGCGAGAAGGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185412.7 ENSMUST00000185732.7 ENSMUST00000188370.7 |
||
| CDS TCA 90 bp | CTGAGCGCCCTCGGTGACAGCTTTGACACACTTGGCCATTGTCTGTaGGGCTCTGCTAATGGAGTCTGTCATATAGAAGTCTTTTATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSALGDSFDTLGHCL*GSANGVCHIEVFYS Trigger: ACTATAAAAGACTTCTATATGACAGACTCCATTAGCAGAGCCTCACAGACAATGGCCAAGTGTGTCAAAGCTGTCACCGAGGGCGCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 90 bp | TCTTATGATTTTCCAGTCTTCTCGTGCCAAGCCAGGAGGCGTCACTaGTACTTTGGTTTGCTGAGCTCTGCCCTCAGTATTGACATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SYDFPVFSCQARRRH*YFGLLSSALSIDIS Trigger: ACTTATGTCAATACTGAGGGCAGAGCTCAGCAAACCAAAGTAGCAGTGACGCCTCCTGGCTTGGCACGAGAAGACTGGAAAATCATAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CCA 90 bp | GATTTGCATGCCGACCTTCTCGCAAGCCTGCAGAACAGTGGTTCCTaGTTCCACCATGACAGACTGACCATCAACAAATACTTCAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: DLHADLLASLQNSGS*FHHDRLTINKYFNQ Trigger: TTGATTGAAGTATTTGTTGATGGTCAGTCTGTCATGGTGGAACCAGGAACCACTGTTCTGCAGGCTTGCGAGAAGGTCGGCATGCAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185412.7 ENSMUST00000185732.7 ENSMUST00000188370.7 |
||
| CDS CCA 90 bp | ACTCTGCAGCAACACCGGTTGTCACTCGAATCTTTTGTACCATGTTaGACACAGCTACAAGAATTGCTGCTCCATCATCTCTCTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLQQHRLSLESFVPC*TQLQELLLHHLSGV Trigger: CACTCCAGAGAGATGATGGAGCAGCAATTCTTGTAGCTGTGTCCAACATGGTACAAAAGATTCGAGTGACAACCGGTGTTGCTGCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185847.2 |
||
| CDS CCA 90 bp | CTCAGTATTGACATAAGTAGCAGACTTTTCTGTGTAAGCAGCCCCTaGGAGAATAACATCAGCCATGGGAGCACCAACATCACCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSIDISSRLFCVSSP*ENNISHGSTNITMV Trigger: CACCATGGTGATGTTGGTGCTCCCATGGCTGATGTTATTCTCCCAGGGGCTGCTTACACAGAAAAGTCTGCTACTTATGTCAATACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 90 bp | TCCTCTTCCTGTTGTTCCCAAATCATCTACTCCTGCAATCTCACTTaGAAACCTGATGCACCGGGTACACTGGATGCATCTAGTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSCCSQIIYSCNLT*KPDAPGTLDASSHD Trigger: ATCATGACTAGATGCATCCAGTGTACCCGGTGCATCAGGTTTGCAAGTGAGATTGCAGGAGTAGATGATTTGGGAACAACAGGAAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CCA 90 bp | ACCAACATCACCATGGTGTCCTTGATAAACAATGAAACAATCCTTTaGCAAGTCCTGTCGCGTGATACAACCTCCATCTGCTCCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TNITMVSLINNETIL*QVLSRDTTSICSQK Trigger: CTTCTGGGAGCAGATGGAGGTTGTATCACGCGACAGGACTTGCCAAAGGATTGTTTCATTGTTTATCAAGGACACCATGGTGATGTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS TCA 90 bp | TATCGAACCAGATTAGGAGAGACCTCTTCAAGACGGTTCCTTACTTaGTCCAGAGTGTCATATGGAAGAGTGATACCTGCAATCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YRTRLGETSSRRFLT*SRVSYGRVIPAISE Trigger: CTCTGAGATTGCAGGTATCACTCTTCCATATGACACTCTGGATCAAGTAAGGAACCGTCTTGAAGAGGTCTCTCCTAATCTGGTTCGATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAAGGGGCCCAATGTTCTaGTCCTCCACAGCACGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPRGPMF*SSTARF Trigger: GAAGCGTGCTGTGGAGGACAAGAACATTGGGCCCCT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCAGGGGCCCAATGTTCTaGTCCTCCACAGCACGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSRGPMF*SSTARF Trigger: GAAGCGTGCTGTGGAGGACAAGAACATTGGGCCCCT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 90 bp | CATTACCTCTCCAGTTCTTGTGCTAACCACAATGTTACTTCCCACTaGATCCATTACATCAATGGACTCTGTCTTTCTTGTTTCCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HYLSSSCANHNVTSH*IHYINGLCLSCFPR Trigger: CCTTGGGAAACAAGAAAGACAGAGTCCATTGATGTAATGGATGCAGTGGGAAGTAACATTGTGGTTAGCACAAGAACTGGAGAGGTAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 90 bp | TACCTGGCTTGCAATCCTATGCAGAATATTCATAACTTTCCACTCTaGAGCAACACCGGTTGTCACTCGAATCTTTTGTACCATGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YLACNPMQNIHNFPL*SNTGCHSNLLYHVG Trigger: TCCAACATGGTACAAAAGATTCGAGTGACAACCGGTGTTGCTGCAGAGTGGAAAGTTATGAATATTCTGCATAGGATTGCAAGCCAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185847.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCTGGACTCTGTCTTTCTaGTTTCCCAAGGCCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSWTLSF*FPKAGQ Trigger: CTGCCCGGCCTTGGGAAACAAGAAAGACAGAGTCCA...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCCCTCGGTGACAGCTTaGACACACTTGGCCATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSPSVTA*THLAIV Trigger: GACAATGGCCAAGTGTGTCAAAGCTGTCACCGAGGG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACCCTCGGTGACAGCTTaGACACACTTGGCCATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPPSVTA*THLAIV Trigger: GACAATGGCCAAGTGTGTCAAAGCTGTCACCGAGGG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS TCA 90 bp | AGATCACATTCACCTCCCTGGTCACAAATAGGACAATCCAATGGGTaGTTTGCTAATAAGAACTCCATCACACCTTCTCTGGCTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSHSPPWSQIGQSNG*FANKNSITPSLAFL Trigger: TAAGAAAGCCAGAGAAGGTGTGATGGAGTTCTTATTAGCAAATCACCCATTGGATTGTCCTATTTGTGACCAGGGAGGTGAATGTGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CCA 90 bp | AGAGACCTCTTCAAGACGGTTCCTTACTTGATCCAGAGTGTCATATaGAAGAGTGATACCTGCAATCTCAGAGAGAGCTCTTATGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RDLFKTVPYLIQSVI*KSDTCNLRESSYDF Trigger: AAAATCATAAGAGCTCTCTCTGAGATTGCAGGTATCACTCTTCCATATGACACTCTGGATCAAGTAAGGAACCGTCTTGAAGAGGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCACAGAATCGAGGGATTaGCATGCCGACCTTCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSTESRD*HADLLA Trigger: TGCGAGAAGGTCGGCATGCAAATCCCTCGATTCTGT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAACAGAATCGAGGGATTaGCATGCCGACCTTCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPTESRD*HADLLA Trigger: TGCGAGAAGGTCGGCATGCAAATCCCTCGATTCTGT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 90 bp | CACCATGACAGACTGACCATCAACAAATACTTCAATCAAGTTACTTaGTGCTGTGCCAGTTGTGCGAACATATCCTTTAGGAGAATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHDRLTINKYFNQVT*CCASCANISFRRIR Trigger: TCTAATTCTCCTAAAGGATATGTTCGCACAACTGGCACAGCAGCAAGTAACTTGATTGAAGTATTTGTTGATGGTCAGTCTGTCATGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185412.7 ENSMUST00000185732.7 ENSMUST00000188370.7 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCACAGCTTTGACACACTaGGCCATTGTCTGTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSTALTH*AIVCEA Trigger: AGCCTCACAGACAATGGCCAAGTGTGTCAAAGCTGT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 90 bp | CATGACAGACTGACCATCAACAAATACTTCAATCAAGTTACTTGCTaGTGTGCCAGTTGTGCGAACATATCCTTTAGGAGAATTAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HDRLTINKYFNQVTC*CASCANISFRRIRK Trigger: CTTTCTAATTCTCCTAAAGGATATGTTCGCACAACTGGCACAGCAGCAAGTAACTTGATTGAAGTATTTGTTGATGGTCAGTCTGTCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185412.7 ENSMUST00000185732.7 ENSMUST00000188370.7 |
||
| CDS-3UTR CAA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACTTCAATCAAGTTACTaGCTGCTGTGCCAGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPLQSSY*LLCQLC Trigger: GCACAACTGGCACAGCAGCAAGTAACTTGATTGAAG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCTTCAATCAAGTTACTaGCTGCTGTGCCAGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSLQSSY*LLCQLC Trigger: GCACAACTGGCACAGCAGCAAGTAACTTGATTGAAG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACTGCAGCAACACCGGTaGTCACTCGAATCTTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPLQQHR*SLESFV Trigger: TACAAAAGATTCGAGTGACAACCGGTGTTGCTGCAG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCATCGCTGCCACAGCATaGCCTTCAAAATTCTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSIAATA*PSKFCN Trigger: GTTACAGAATTTTGAAGGCAATGCTGTGGCAGCGAT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCACACAGCTACAAGAATaGCTGCTCCATCATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSTQLQE*LLHHLS Trigger: AGAGAGATGATGGAGCAGCAATTCTTGTAGCTGTGT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAACACAGCTACAAGAATaGCTGCTCCATCATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPTQLQE*LLHHLS Trigger: AGAGAGATGATGGAGCAGCAATTCTTGTAGCTGTGT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATGTCACTCGAATCTTTaGTACCATGTTGGACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPCHSNL*YHVGHS Trigger: GCTGTGTCCAACATGGTACAAAAGATTCGAGTGACA...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCAAGACGGTTCCTTACTaGATCCAGAGTGTCATATGG | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSKTVPY*IQSVIW Trigger: CCATATGACACTCTGGATCAAGTAAGGAACCGTCTT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 90 bp | GCAAACCTGGTTTTATCAGAGATCCATTCTTCATTAATATCTTCATaGATTCTTGGCAAAATCCTCATTACCTCTCCAGTTCTTGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: ANLVLSEIHSSLISS*ILGKILITSPVLVL Trigger: TAGCACAAGAACTGGAGAGGTAATGAGGATTTTGCCAAGAATGCATGAAGATATTAATGAAGAATGGATCTCTGATAAAACCAGGTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCAAATGTATGTGCCAACTaGCATGTCATTTCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPNVCAN*HVISSS Trigger: GGAAGAGGAAATGACATGCAAGTTGGCACATACATT...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCAATGTATGTGCCAACTaGCATGTCATTTCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSNVCAN*HVISSS Trigger: GGAAGAGGAAATGACATGCAAGTTGGCACATACATT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | CATTCAGACTCATGTTGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCACCTCAAAACGTGGATTaGTACCAACTAGAAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: HSDSCWKTLTYKGLQQCPPQNVD*YQLEEQ Trigger: TTGTTCTTCTAGTTGGTACAAATCCACGTTTTGAGG...TGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCAACATGAGTCTGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCCCTCAAAACGTGGATTaGTACCAACTAGAAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSPQNVD*YQLEEQ Trigger: TTGTTCTTCTAGTTGGTACAAATCCACGTTTTGAGG...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACATTAACTTATAAGGGATTACAGCAATGTCCATTTACTGTCTGTAGCAATCCAATGGGTGATTaGCTAATAAGAACTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: WKTLTYKGLQQCPFTVCSNPMGD*LIRTPS Trigger: TGATGGAGTTCTTATTAGCAAATCACCCATTGGATT...GCTACAGACAGTAAATGGACATTGCTGTAATCCCTTATAAGTTAATGTTTTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 72 bp | TTTCCAGTCTTCTCGTGCCAAGCCAGGAGGCGTCACTaGTACTTTGGTTTGCTGAGCTCTGCCCTCAGTATT | + |
|
Preference number: 6 (lower is better) Translates to: FPVFSCQARRRH*YFGLLSSALSI Trigger: AATACTGAGGGCAGAGCTCAGCAAACCAAAGTAGCAGTGACGCCTCCTGGCTTGGCACGAGAAGACTGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CAA 90 bp | CCAGTCTTCTCGTGCCAAGCCAGGAGGCGTCACTGCTACTTTGGTTaGCTGAGCTCTGCCCTCAGTATTGACATAAGTAGCAGACTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PVFSCQARRRHCYFG*LSSALSIDISSRLF Trigger: GAAAAGTCTGCTACTTATGTCAATACTGAGGGCAGAGCTCAGCAAACCAAAGTAGCAGTGACGCCTCCTGGCTTGGCACGAGAAGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CAA 72 bp | CTAGTCATGATGGTCTTTACTAGGGGCCCAATGTTCTaGTCCTCCACAGCACGCTTCCCCTCTAGAAATCGG | + |
|
Preference number: 6 (lower is better) Translates to: LVMMVFTRGPMF*SSTARFPSRNR Trigger: CCGATTTCTAGAGGGGAAGCGTGCTGTGGAGGACAAGAACATTGGGCCCCTAGTAAAGACCATCATGACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000188370.7 |
||
| CDS CAA 90 bp | ATTTCCAGCAACAGACAACCTTTCATGGTAACAGAATCGAGGGATTaGCATGCCGACCTTCTCGCAAGCCTGCAGAACAGTGGTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ISSNRQPFMVTESRD*HADLLASLQNSGSW Trigger: CCAGGAACCACTGTTCTGCAGGCTTGCGAGAAGGTCGGCATGCAAATCCCTCGATTCTGTTACCATGAAAGGTTGTCTGTTGCTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185412.7 ENSMUST00000185732.7 ENSMUST00000188370.7 |
||
| CDS CAA 90 bp | TGGATGCATCTAGTCATGATGGTCTTTACTAGGGGCCCAATGTTCTaGTCCTCCACAGCACGCTTCCCCTCTAGAAATCGGCTCCTATCA | + |
|
Preference number: 6 (lower is better) Translates to: WMHLVMMVFTRGPMF*SSTARFPSRNRLLS Trigger: TGATAGGAGCCGATTTCTAGAGGGGAAGCGTGCTGTGGAGGACAAGAACATTGGGCCCCTAGTAAAGACCATCATGACTAGATGCATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000188370.7 |
||
| CDS GCA 72 bp | CATCCACCAAGCCTCCTGCAATCGCTGCCACAGCATTaGCTTCAAAATTCTGTAACATTCCAGCTACACGAG | + |
|
Preference number: 6 (lower is better) Translates to: HPPSLLQSLPQH*LQNSVTFQLHE Trigger: CTCGTGTAGCTGGAATGTTACAGAATTTTGAAGGCAATGCTGTGGCAGCGATTGCAGGAGGCTTGGTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 72 bp | CTTTGGCAAGTCCTGTCGCGTGATACAACCTCCATCTaGTCCCAGAAGAAACAGCATTTTGGGAGGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LWQVLSRDTTSI*SQKKQHFGRVL Trigger: AAGAACCCTCCCAAAATGCTGTTTCTTCTGGGAGCAGATGGAGGTTGTATCACGCGACAGGACTTGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 72 bp | CTCAGAGAGAGCTCTTATGATTTTCCAGTCTTCTCGTaGCAAGCCAGGAGGCGTCACTGCTACTTTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRESSYDFPVFS*QARRRHCYFGL Trigger: CAAACCAAAGTAGCAGTGACGCCTCCTGGCTTGGCACGAGAAGACTGGAAAATCATAAGAGCTCTCTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CCA 72 bp | GCAATCTCACTTGCAAACCTGATGCACCGGGTACACTaGATGCATCTAGTCATGATGGTCTTTACTAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AISLANLMHRVH*MHLVMMVFTRG Trigger: GCCCCTAGTAAAGACCATCATGACTAGATGCATCCAGTGTACCCGGTGCATCAGGTTTGCAAGTGAGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CAA 72 bp | GCATCCACCAAGCCTCCTGCAATCGCTGCCACAGCATaGCCTTCAAAATTCTGTAACATTCCAGCTACACGA | + |
|
Preference number: 6 (lower is better) Translates to: ASTKPPAIAATA*PSKFCNIPATR Trigger: TCGTGTAGCTGGAATGTTACAGAATTTTGAAGGCAATGCTGTGGCAGCGATTGCAGGAGGCTTGGTGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS TCA 72 bp | CTCGGTGACAGCTTTGACACACTTGGCCATTGTCTGTaGGGCTCTGCTAATGGAGTCTGTCATATAGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGDSFDTLGHCL*GSANGVCHIEV Trigger: GACTTCTATATGACAGACTCCATTAGCAGAGCCTCACAGACAATGGCCAAGTGTGTCAAAGCTGTCACCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CCA 72 bp | GACATAAGTAGCAGACTTTTCTGTGTAAGCAGCCCCTaGGAGAATAACATCAGCCATGGGAGCACCAACATC | + |
|
Preference number: 6 (lower is better) Translates to: DISSRLFCVSSP*ENNISHGSTNI Trigger: GATGTTGGTGCTCCCATGGCTGATGTTATTCTCCCAGGGGCTGCTTACACAGAAAAGTCTGCTACTTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CAA 72 bp | AACAGACAACCTTTCATGGTAACAGAATCGAGGGATTaGCATGCCGACCTTCTCGCAAGCCTGCAGAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: NRQPFMVTESRD*HADLLASLQNS Trigger: ACTGTTCTGCAGGCTTGCGAGAAGGTCGGCATGCAAATCCCTCGATTCTGTTACCATGAAAGGTTGTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185412.7 ENSMUST00000185732.7 ENSMUST00000188370.7 |
||
| CDS CAA 90 bp | CACTCTGCAGCAACACCGGTTGTCACTCGAATCTTTTGTACCATGTaGGACACAGCTACAAGAATTGCTGCTCCATCATCTCTCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSAATPVVTRIFCTM*DTATRIAAPSSLWS Trigger: ACTCCAGAGAGATGATGGAGCAGCAATTCTTGTAGCTGTGTCCAACATGGTACAAAAGATTCGAGTGACAACCGGTGTTGCTGCAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185847.2 |
||
| CDS GCA 72 bp | TGTTGTTCCCAAATCATCTACTCCTGCAATCTCACTTaGAAACCTGATGCACCGGGTACACTGGATGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: CCSQIIYSCNLT*KPDAPGTLDAS Trigger: AGATGCATCCAGTGTACCCGGTGCATCAGGTTTGCAAGTGAGATTGCAGGAGTAGATGATTTGGGAACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 72 bp | ATTTCCTCTTCCTGTTGTTCCCAAATCATCTACTCCTaGAATCTCACTTGCAAACCTGATGCACCGGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: ISSSCCSQIIYS*NLTCKPDAPGT Trigger: TGTACCCGGTGCATCAGGTTTGCAAGTGAGATTGCAGGAGTAGATGATTTGGGAACAACAGGAAGAGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 72 bp | ACCTCGCAGAATGAATGCCTCCCTGAAGCAATGTCTTaGAGAATTTTAGGAGAGTCTCCTAGATGGTCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: TSQNECLPEAMS*RILGESPRWSY Trigger: ATACGACCATCTAGGAGACTCTCCTAAAATTCTGCAAGACATTGCTTCAGGGAGGCATTCATTCTGCGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 72 bp | AATCTTTTGTACCATGTTGGACACAGCTACAAGAATTaGTGCTCCATCATCTCTCTGGAGTGCAGAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NLLYHVGHSYKN*CSIISLECRTA Trigger: GGCAGTTCTGCACTCCAGAGAGATGATGGAGCAGCAATTCTTGTAGCTGTGTCCAACATGGTACAAAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185847.2 |
||
| CDS CCA 72 bp | GACACAGCTACAAGAATTGCTGCTCCATCATCTCTCTaGAGTGCAGAACTGCCTAAAACCACCATTGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DTATRIAAPSSL*SAELPKTTIGF Trigger: AAAACCAATGGTGGTTTTAGGCAGTTCTGCACTCCAGAGAGATGATGGAGCAGCAATTCTTGTAGCTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CCA 72 bp | CAACACCGGTTGTCACTCGAATCTTTTGTACCATGTTaGACACAGCTACAAGAATTGCTGCTCCATCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: QHRLSLESFVPC*TQLQELLLHHL Trigger: GAGATGATGGAGCAGCAATTCTTGTAGCTGTGTCCAACATGGTACAAAAGATTCGAGTGACAACCGGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185847.2 |
||
| CDS CCA 72 bp | CCTCTAGAAATCGGCTCCTATCACTTCCAAACATCATaGACTGGTCCTTTGGAGCTTTCTCAATCTCTACCA | + |
|
Preference number: 6 (lower is better) Translates to: PLEIGSYHFQTS*TGPLELSQSLP Trigger: TGGTAGAGATTGAGAAAGCTCCAAAGGACCAGTCCATGATGTTTGGAAGTGATAGGAGCCGATTTCTAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188370.7 |
||
| CDS CAA 72 bp | GAATCTTTTGTACCATGTTGGACACAGCTACAAGAATaGCTGCTCCATCATCTCTCTGGAGTGCAGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ESFVPCWTQLQE*LLHHLSGVQNC Trigger: GCAGTTCTGCACTCCAGAGAGATGATGGAGCAGCAATTCTTGTAGCTGTGTCCAACATGGTACAAAAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185847.2 |
||
| CDS CAA 72 bp | GCAACACCGGTTGTCACTCGAATCTTTTGTACCATGTaGGACACAGCTACAAGAATTGCTGCTCCATCATCT | + |
|
Preference number: 6 (lower is better) Translates to: ATPVVTRIFCTM*DTATRIAAPSS Trigger: AGATGATGGAGCAGCAATTCTTGTAGCTGTGTCCAACATGGTACAAAAGATTCGAGTGACAACCGGTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185847.2 |
||
| CDS CAA 72 bp | CAGATTAGGAGAGACCTCTTCAAGACGGTTCCTTACTaGATCCAGAGTGTCATATGGAAGAGTGATACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QIRRDLFKTVPY*IQSVIWKSDTC Trigger: GCAGGTATCACTCTTCCATATGACACTCTGGATCAAGTAAGGAACCGTCTTGAAGAGGTCTCTCCTAATCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CAA 90 bp | TTGTCACTCGAATCTTTTGTACCATGTTGGACACAGCTACAAGAATaGCTGCTCCATCATCTCTCTGGAGTGCAGAACTGCCTAAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLESFVPCWTQLQE*LLHHLSGVQNCLKP Trigger: TGGTTTTAGGCAGTTCTGCACTCCAGAGAGATGATGGAGCAGCAATTCTTGTAGCTGTGTCCAACATGGTACAAAAGATTCGAGTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185847.2 |
||
| CDS TCA 72 bp | TCACCTCCCTGGTCACAAATAGGACAATCCAATGGGTaGTTTGCTAATAAGAACTCCATCACACCTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPPWSQIGQSNG*FANKNSITPSL Trigger: CAGAGAAGGTGTGATGGAGTTCTTATTAGCAAATCACCCATTGGATTGTCCTATTTGTGACCAGGGAGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CCA 72 bp | GATAATTGGAACGTAAGTCTGTACCAGCTCCTTCAGTaGGGAAGATCTCTTCAGTGCATAAGTTGTCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: DNWNVSLYQLLQ*GRSLQCISCQS Trigger: ACTCTGACAACTTATGCACTGAAGAGATCTTCCCCACTGAAGGAGCTGGTACAGACTTACGTTCCAATTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CCA 72 bp | TTCAAGACGGTTCCTTACTTGATCCAGAGTGTCATATaGAAGAGTGATACCTGCAATCTCAGAGAGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FKTVPYLIQSVI*KSDTCNLRESS Trigger: AGAGCTCTCTCTGAGATTGCAGGTATCACTCTTCCATATGACACTCTGGATCAAGTAAGGAACCGTCTTGAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CAA 90 bp | ATATCGAACCAGATTAGGAGAGACCTCTTCAAGACGGTTCCTTACTaGATCCAGAGTGTCATATGGAAGAGTGATACCTGCAATCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ISNQIRRDLFKTVPY*IQSVIWKSDTCNLR Trigger: TCTGAGATTGCAGGTATCACTCTTCCATATGACACTCTGGATCAAGTAAGGAACCGTCTTGAAGAGGTCTCTCCTAATCTGGTTCGATAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS TCA 72 bp | CAACATCTGCTTCTTCCACACCAGCAATTGTGGTATTaGGAAGATAATTGGAACGTAAGTCTGTACCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QHLLLPHQQLWY*EDNWNVSLYQL Trigger: GAGCTGGTACAGACTTACGTTCCAATTATCTTCTCAATACCACAATTGCTGGTGTGGAAGAAGCAGATGTTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS CAA 90 bp | TCTGTACCAGCTCCTTCAGTGGGGAAGATCTCTTCAGTGCATAAGTaGTCAGAGTCAACTTTATTAAGCAAGTCTTTCAGAGCTACTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SVPAPSVGKISSVHK*SESTLLSKSFRATK Trigger: CTTAGTAGCTCTGAAAGACTTGCTTAATAAAGTTGACTCTGACAACTTATGCACTGAAGAGATCTTCCCCACTGAAGGAGCTGGTACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 72 bp | CTGACCATCAACAAATACTTCAATCAAGTTACTTGCTaGTGTGCCAGTTGTGCGAACATATCCTTTAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LTINKYFNQVTC*CASCANISFRR Trigger: TCTCCTAAAGGATATGTTCGCACAACTGGCACAGCAGCAAGTAACTTGATTGAAGTATTTGTTGATGGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185412.7 ENSMUST00000185732.7 ENSMUST00000188370.7 |
||
| CDS GCA 72 bp | AGACTGACCATCAACAAATACTTCAATCAAGTTACTTaGTGCTGTGCCAGTTGTGCGAACATATCCTTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLTINKYFNQVT*CCASCANISFR Trigger: CCTAAAGGATATGTTCGCACAACTGGCACAGCAGCAAGTAACTTGATTGAAGTATTTGTTGATGGTCAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185412.7 ENSMUST00000185732.7 ENSMUST00000188370.7 |
||
| CDS GCA 72 bp | TCCAGTTCTTGTGCTAACCACAATGTTACTTCCCACTaGATCCATTACATCAATGGACTCTGTCTTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSCANHNVTSH*IHYINGLCLSC Trigger: ACAAGAAAGACAGAGTCCATTGATGTAATGGATGCAGTGGGAAGTAACATTGTGGTTAGCACAAGAACTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||
| CDS GCA 72 bp | TGCAATCCTATGCAGAATATTCATAACTTTCCACTCTaGAGCAACACCGGTTGTCACTCGAATCTTTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: CNPMQNIHNFPL*SNTGCHSNLLY Trigger: GTACAAAAGATTCGAGTGACAACCGGTGTTGCTGCAGAGTGGAAAGTTATGAATATTCTGCATAGGATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 ENSMUST00000185847.2 |
||
| CDS CAA 72 bp | GCTCCTTCAGTGGGGAAGATCTCTTCAGTGCATAAGTaGTCAGAGTCAACTTTATTAAGCAAGTCTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: APSVGKISSVHK*SESTLLSKSFR Trigger: TCTGAAAGACTTGCTTAATAAAGTTGACTCTGACAACTTATGCACTGAAGAGATCTTCCCCACTGAAGGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027111.15 ENSMUST00000168099.9 |
||