Pregenerated sensors for NDUFB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026032Ensembl transcript IDs: ENSMUST00000027193.9
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GCCAAGAATGCTACAGTGAGAGAATCTTATTTTTATGGAAGAGACGTCACAAGGATCTCCAAGCCTCATTaGGAGCCCATGGATCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: AKNATVRESYFYGRDVTRISKPH*EPMDPS Trigger: TGAGGGATCCATGGGCTCGCAATGAGGCTTGGAGAT...CCTTGTGACGTCTCTTCCATAAAAATAAGATTCTCTCACTGTAGCATTCTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027193.9 |
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| CDS-3UTR TCA 90 bp | GCCAAGAATGCTACAGTGAGAGAATCTTATTTTTATGGAAGAGACGTCACAAGGCAGCAAACCCCCATTTaGATCCTTTTAATATTACAC | + |
|
Preference number: 4 (lower is better) Translates to: AKNATVRESYFYGRDVTRQQTPI*ILLILH Trigger: GTGTAATATTAAAAGGATTCAAATGGGGGTTTGCTG...CCTTGTGACGTCTCTTCCATAAAAATAAGATTCTCTCACTGTAGCATTCTTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027193.9 |
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| CDS-3UTR CCA 90 bp | ACAGCCAAGAATGCTACAGTGAGAGAATCTTATTTTTATGGAAGAGACGTCACATTCTTATCACCATTCTaGGAATCCAGGAAATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAKNATVRESYFYGRDVTFLSPF*ESRKYS Trigger: TGAATATTTCCTGGATTCCCAGAATGGTGATAAGAA...TGTGACGTCTCTTCCATAAAAATAAGATTCTCTCACTGTAGCATTCTTGGCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027193.9 |
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| CDS-3UTR CAA 90 bp | ACAGCCAAGAATGCTACAGTGAGAGAATCTTATTTTTATGGAAGAGACGTCACACTCGGGAAGGTGATGTaGCCTGCAAAGCCGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TAKNATVRESYFYGRDVTLGKVM*PAKPPM Trigger: CATGGGCGGCTTTGCAGGCAACATCACCTTCCCGAG...TGTGACGTCTCTTCCATAAAAATAAGATTCTCTCACTGTAGCATTCTTGGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027193.9 |
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| CDS-3UTR CAA 90 bp | AAACATACAGCCAAGAATGCTACAGTGAGAGAATCTTATTTTTATGGAAGAGACTATCTCCAAGCCTCATaGCGAGCCCATGGATCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KHTAKNATVRESYFYGRDYLQAS*RAHGSL Trigger: GAGGGATCCATGGGCTCGCAATGAGGCTTGGAGATA...GTCTCTTCCATAAAAATAAGATTCTCTCACTGTAGCATTCTTGGCTGTATGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027193.9 |
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| CDS-3UTR CAA 90 bp | AAACATACAGCCAAGAATGCTACAGTGAGAGAATCTTATTTTTATGGAAGAGACGCAGCAAACCCCCATTaGAATCCTTTTAATATTACA | + |
|
Preference number: 5 (lower is better) Translates to: KHTAKNATVRESYFYGRDAANPH*NPFNIT Trigger: TGTAATATTAAAAGGATTCAAATGGGGGTTTGCTGC...GTCTCTTCCATAAAAATAAGATTCTCTCACTGTAGCATTCTTGGCTGTATGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027193.9 |
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