Pregenerated sensors for NDUFB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002416Ensembl transcript IDs: ENSMUST00000135671.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTAAAGCCTCTGGACTGGTTACGCTTGCTCACACTCACACAGATGTaGACCCAGCCCCATGCAAGTGTCCCCAGTGCCACAGGTAGGACT | + |
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Preference number: 1 (lower is better) Translates to: LKPLDWLRLLTLTQM*TQPHASVPSATGRT Trigger: AGTCCTACCTGTGGCACTGGGGACACTTGCATGGGGCTGGGTTCACATCTGTGTGAGTGTGAGCAAGCGTAACCAGTCCAGAGGCTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 90 bp | GGTGTGTCCTCGTTAGAGGAAGTGAGTCACTGCAAGGGTAGGCTCTaGGGTCTCCAATGCTCAAGCTACATCCAGTGTCGCATAGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: GVSSLEEVSHCKGRL*GLQCSSYIQCRIVS Trigger: GGAGACTATGCGACACTGGATGTAGCTTGAGCATTGGAGACCTCAGAGCCTACCCTTGCAGTGACTCACTTCCTCTAACGAGGACACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 90 bp | AGCAATCCCTTGGCCTCACTCTCCACAAAGCTAAACTTAGAGGTGTaGAACTCCACCCCACCCCCAAATCCTGGCACTGTACTCCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SNPLASLSTKLNLEV*NSTPPPNPGTVLQR Trigger: TCTTTGGAGTACAGTGCCAGGATTTGGGGGTGGGGTGGAGTTGCACACCTCTAAGTTTAGCTTTGTGGAGAGTGAGGCCAAGGGATTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 90 bp | AAGCAATGGACTCTTCTGACCCCTAACCTCTGGGGCAACAATCTCTaGAGCATCTATATGGTCACATCACCTGTCAGCACACGAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KQWTLLTPNLWGNNL*SIYMVTSPVSTRGR Trigger: TCTGCCTCGTGTGCTGACAGGTGATGTGACCATATAGATGCTCCAGAGATTGTTGCCCCAGAGGTTAGGGGTCAGAAGAGTCCATTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 90 bp | CTTATGAGTCCTACAAGAGGCCACTTGGAAAGCAATGGACTCTTCTaGCCCCTAACCTCTGGGGCAACAATCTCTGGAGCATCTATATGG | + |
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Preference number: 1 (lower is better) Translates to: LMSPTRGHLESNGLF*PLTSGATISGASIW Trigger: CCATATAGATGCTCCAGAGATTGTTGCCCCAGAGGTTAGGGGTCAGAAGAGTCCATTGCTTTCCAAGTGGCCTCTTGTAGGACTCATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 90 bp | GCTGCCAGTGAGAAAGGCAGCTGCTCCACTTATTTCAGCTCCTACTaGTACTGTGGCAACCGAGGAAAAGGAAGTAGATATCTGTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: AASEKGSCSTYFSSY*YCGNRGKGSRYLCY Trigger: ATAACACAGATATCTACTTCCTTTTCCTCGGTTGCCACAGTAGCAGTAGGAGCTGAAATAAGTGGAGCAGCTGCCTTTCTCACTGGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 90 bp | GTCTGCCTGGATGCTGCCATGCTTCCCACCTTGATAATAATGGACTaGACCTCTGAGACTGTAACCCAGCCCCAATTAAATGTCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: VCLDAAMLPTLIIMD*TSETVTQPQLNVFL Trigger: AAGAAAGACATTTAATTGGGGCTGGGTTACAGTCTCAGAGGTTCAGTCCATTATTATCAAGGTGGGAAGCATGGCAGCATCCAGGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 90 bp | TTCAGGCTAAGATGCATAATTAGTTCCATAATGTTGCTTGCTGCTTaGTGGGTAGAGATGAAGTTGCCGAATCCCTGCATGGTCGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: FRLRCIISSIMLLAA*WVEMKLPNPCMVEP Trigger: TGGCTCGACCATGCAGGGATTCGGCAACTTCATCTCTACCCATCAAGCAGCAAGCAACATTATGGAACTAATTATGCATCTTAGCCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 90 bp | TCCTACTTAAACACACTGTGTAGACTTTATTCTAAGTGGCTCTTCTaGCACAAGGAGAGGGTAAGGACCAGAAAAGAGCCACTCTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: SYLNTLCRLYSKWLF*HKERVRTRKEPLSW Trigger: CCAAGAGAGTGGCTCTTTTCTGGTCCTTACCCTCTCCTTGTGGCAGAAGAGCCACTTAGAATAAAGTCTACACAGTGTGTTTAAGTAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 90 bp | CGTTTTACAAATGAGGACATAGACTTAGGGTCAGACCTGGCTACCTaGCCTCCAGAGCTTGAAGTGTTATATCTATCAGATTGTACACTG | + |
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Preference number: 1 (lower is better) Translates to: RFTNEDIDLGSDLAT*PPELEVLYLSDCTL Trigger: CAGTGTACAATCTGATAGATATAACACTTCAAGCTCTGGAGGTCAGGTAGCCAGGTCTGACCCTAAGTCTATGTCCTCATTTGTAAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 90 bp | ATGTGCCTCTCCAACCTAAACATGCTGCCAGGACTTAGCACTCTCTaGTCCATAGCTTCCTCAGCTGAACAAAAATTATCCTGTATTTAC | + |
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Preference number: 1 (lower is better) Translates to: MCLSNLNMLPGLSTL*SIASSAEQKLSCIY Trigger: GTAAATACAGGATAATTTTTGTTCAGCTGAGGAAGCTATGGATCAGAGAGTGCTAAGTCCTGGCAGCATGTTTAGGTTGGAGAGGCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 90 bp | ATGGGATTATCCTACTTAAACACACTGTGTAGACTTTATTCTAAGTaGCTCTTCTGCCACAAGGAGAGGGTAAGGACCAGAAAAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: MGLSYLNTLCRLYSK*LFCHKERVRTRKEP Trigger: TGGCTCTTTTCTGGTCCTTACCCTCTCCTTGTGGCAGAAGAGCCACTTAGAATAAAGTCTACACAGTGTGTTTAAGTAGGATAATCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 90 bp | GCTTTCACAAAGATCTCTACCATGCCAGCTCTTCTGAAGGGGCTGTaGTCATTCTATCTTACTGTCTGGATTACATATAATCTCCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: AFTKISTMPALLKGL*SFYLTVWITYNLPN Trigger: GTTTGGGAGATTATATGTAATCCAGACAGTAAGATAGAATGATCACAGCCCCTTCAGAAGAGCTGGCATGGTAGAGATCTTTGTGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 90 bp | TCTTTCAAAATGCTTTCACAAAGATCTCTACCATGCCAGCTCTTCTaGAGGGGCTGTGATCATTCTATCTTACTGTCTGGATTACATATA | + |
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Preference number: 1 (lower is better) Translates to: SFKMLSQRSLPCQLF*RGCDHSILLSGLHI Trigger: TATATGTAATCCAGACAGTAAGATAGAATGATCACAGCCCCTTCAGAAGAGCTGGCATGGTAGAGATCTTTGTGAAAGCATTTTGAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTGGCAGGAGGGCAGGGGCCTGAGGGGTCCATTCTGGCCTTTCTGTTGTATGACTCTGGCTGCCAGTaGGAAAGGCAGCTGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: YLAGGQGPEGSILAFLLYDSGCQ*ERQLLH Trigger: GTGGAGCAGCTGCCTTTCTCACTGGCAGCCAGAGTC...ATACAACAGAAAGGCCAGAATGGACCCCTCAGGCCCCTGCCCTCCTGCCAGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CCA 90 bp | TATCTGGCAGGAGGGCAGGGGCCTGAGGGGTCCATTCTGGCCTTTCTGTTGTATCCCACCCCCAAATCCTaGCACTGTACTCCAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: YLAGGQGPEGSILAFLLYPTPKS*HCTPKT Trigger: GGTCTTTGGAGTACAGTGCCAGGATTTGGGGGTGGG...ATACAACAGAAAGGCCAGAATGGACCCCTCAGGCCCCTGCCCTCCTGCCAGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTGGCAGGAGGGCAGGGGCCTGAGGGGTCCATTCTGGCCTTTCTGTTGTATGGACTTAGCACTCTCTaGTCCATAGCTTCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: YLAGGQGPEGSILAFLLYGLSTL*SIASSA Trigger: AGCTGAGGAAGCTATGGATCAGAGAGTGCTAAGTCC...ATACAACAGAAAGGCCAGAATGGACCCCTCAGGCCCCTGCCCTCCTGCCAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAAGGAGAGGGTAAGGACCAGAAAAGAGCCACTCTCTTGGTCTTTCAATTTCCCGAGAGGGTCAGCTaGAAGGGCACAAACCACTGG | + |
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Preference number: 2 (lower is better) Translates to: PQGEGKDQKRATLLVFQFPERVS*KGTNHW Trigger: CCAGTGGTTTGTGCCCTTTCAGCTGACCCTCTCGGG...AAATTGAAAGACCAAGAGAGTGGCTCTTTTCTGGTCCTTACCCTCTCCTTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTGGCAGGAGGGCAGGGGCCTGAGGGGTCCATTCTGGCCTTTCTGTTGTATCTTCTGAAGGGGCTGTaGTCATTCTATCTTACTGTC | + |
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Preference number: 2 (lower is better) Translates to: YLAGGQGPEGSILAFLLYLLKGL*SFYLTV Trigger: GACAGTAAGATAGAATGATCACAGCCCCTTCAGAAG...ATACAACAGAAAGGCCAGAATGGACCCCTCAGGCCCCTGCCCTCCTGCCAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTCATTCTGTCCCCCAGGCTGTCTCCAGCAATCCCTTGGCCTCACTCTCCACTGGGGCAACAATCTCTaGAGCATCTATATGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: ISFCPPGCLQQSLGLTLHWGNNL*SIYMVT Trigger: TGTGACCATATAGATGCTCCAGAGATTGTTGCCCCA...GTGGAGAGTGAGGCCAAGGGATTGCTGGAGACAGCCTGGGGGACAGAATGAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTGGCAGGAGGGCAGGGGCCTGAGGGGTCCATTCTGGCCTTTCTGTTGTATAAGCCGTTTTACAAATaGGGACATAGACTTAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: YLAGGQGPEGSILAFLLYKPFYK*GHRLRV Trigger: GACCCTAAGTCTATGTCCTCATTTGTAAAACGGCTT...ATACAACAGAAAGGCCAGAATGGACCCCTCAGGCCCCTGCCCTCCTGCCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR GCA 90 bp | GATCAGGTTTGGGGCTGGTGGGGCTCTCCTGTGAAATCATACCAGGATCCCAGGACAGTGTCTAGCCTGTaGTACAATTTGCTGCGAATT | + |
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Preference number: 2 (lower is better) Translates to: DQVWGWWGSPVKSYQDPRTVSSL*YNLLRI Trigger: AATTCGCAGCAAATTGTAGCACAGGCTAGACACTGT...CCTGGGATCCTGGTATGATTTCACAGGAGAGCCCCACCAGCCCCAAACCTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAAGGAGAGGGTAAGGACCAGAAAAGAGCCACTCTCTTGGTCTTTCAATTTCTGACCCCTAACCTCTaGGGCAACAATCTCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PQGEGKDQKRATLLVFQFLTPNL*GNNLWS Trigger: GCTCCAGAGATTGTTGCCCCAGAGGTTAGGGGTCAG...AAATTGAAAGACCAAGAGAGTGGCTCTTTTCTGGTCCTTACCCTCTCCTTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CCA 90 bp | GATCAGGTTTGGGGCTGGTGGGGCTCTCCTGTGAAATCATACCAGGATCCCAGGCAAAATCCTTTTGTCTaGGTGAATCTGAGACACATC | + |
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Preference number: 2 (lower is better) Translates to: DQVWGWWGSPVKSYQDPRQNPFV*VNLRHI Trigger: GATGTGTCTCAGATTCACCCAGACAAAAGGATTTTG...CCTGGGATCCTGGTATGATTTCACAGGAGAGCCCCACCAGCCCCAAACCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAAGGAGAGGGTAAGGACCAGAAAAGAGCCACTCTCTTGGTCTTTCAATTTAATGGACTGAACCTCTaGGACTGTAACCCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: PQGEGKDQKRATLLVFQFNGLNL*DCNPAP Trigger: TGGGGCTGGGTTACAGTCTCAGAGGTTCAGTCCATT...AAATTGAAAGACCAAGAGAGTGGCTCTTTTCTGGTCCTTACCCTCTCCTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CCA 90 bp | GATCAGGTTTGGGGCTGGTGGGGCTCTCCTGTGAAATCATACCAGGATCCCAGGCTAACAGGAAGAATTTaGCAAATTTCCAACCCATCT | + |
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Preference number: 2 (lower is better) Translates to: DQVWGWWGSPVKSYQDPRLTGRI*QISNPS Trigger: AGATGGGTTGGAAATTTGCCAAATTCTTCCTGTTAG...CCTGGGATCCTGGTATGATTTCACAGGAGAGCCCCACCAGCCCCAAACCTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CAA 90 bp | CTTCTGCCACAAGGAGAGGGTAAGGACCAGAAAAGAGCCACTCTCTaGGTCTTTCAATTTTTAAAGCCTCTGGACTGGTTACGCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LLPQGEGKDQKRATL*VFQFLKPLDWLRLL Trigger: GAGCAAGCGTAACCAGTCCAGAGGCTTTAAAAATTGAAAGACCAAGAGAGTGGCTCTTTTCTGGTCCTTACCCTCTCCTTGTGGCAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR GCA 90 bp | CCACAAGGAGAGGGTAAGGACCAGAAAAGAGCCACTCTCTTGGTCTTTCAATTTGAAACCCTAGGACACTaGCTTACCACATCAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PQGEGKDQKRATLLVFQFETLGH*LTTSAS Trigger: ACTGGCTGATGTGGTAAGGCAGTGTCCTAGGGTTTC...AAATTGAAAGACCAAGAGAGTGGCTCTTTTCTGGTCCTTACCCTCTCCTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTTAGAGTAGTGGTTCTCAACCTATGGGTTCTTGACCTTTCAGGGGGACACCTCCAGCACTTTGTCTaGCTGGATGCTGCCATGCTT | + |
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Preference number: 2 (lower is better) Translates to: LFRVVVLNLWVLDLSGGHLQHFV*LDAAML Trigger: AAGCATGGCAGCATCCAGGCAGACAAAGTGCTGGAG...GTGTCCCCCTGAAAGGTCAAGAACCCATAGGTTGAGAACCACTACTCTAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR GCA 90 bp | TACTTGTTCACAGCCAAATCAGGCAGTCTCTCAAACAACCTTGATAAGTCATCTCTTTGTCTGCCTGGATaGTGCCATGCTTCCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: YLFTAKSGSLSNNLDKSSLCLPG*CHASHL Trigger: AAGGTGGGAAGCATGGCAGCATCCAGGCAGACAAAG...AGATGACTTATCAAGGTTGTTTGAGAGACTGCCTGATTTGGCTGTGAACAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTTAGAGTAGTGGTTCTCAACCTATGGGTTCTTGACCTTTCAGGGGGACACTATTTCAGCTCCTACTaGTACTGTGGCAACCGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LFRVVVLNLWVLDLSGGHYFSSY*YCGNRG Trigger: TCCTCGGTTGCCACAGTAGCAGTAGGAGCTGAAATA...GTGTCCCCCTGAAAGGTCAAGAACCCATAGGTTGAGAACCACTACTCTAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CCA 90 bp | TACTTGTTCACAGCCAAATCAGGCAGTCTCTCAAACAACCTTGATAAGTCATCTTCTCCAGCAATCCCTTaGCCTCACTCTCCACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: YLFTAKSGSLSNNLDKSSSPAIP*PHSPQS Trigger: GCTTTGTGGAGAGTGAGGCCAAGGGATTGCTGGAGA...AGATGACTTATCAAGGTTGTTTGAGAGACTGCCTGATTTGGCTGTGAACAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGACTTTTGTCCACAAACACATCTGAAAGTGAACTGGTATGTGTTCACTCAGAGCACTTTGTCTGCCTaGATGCTGCCATGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: TDFCPQTHLKVNWYVFTQSTLSA*MLPCFP Trigger: TGGGAAGCATGGCAGCATCCAGGCAGACAAAGTGCT...CTGAGTGAACACATACCAGTTCACTTTCAGATGTGTTTGTGGACAAAAGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CAA 90 bp | CAGACACAAGCTTACAACAAACACCTAGTTCCACCCTCTCCTTACTaGTTCACAGCCAAATCAGGCAGTCTCTCAAACAACCTTGATAAG | + |
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Preference number: 2 (lower is better) Translates to: QTQAYNKHLVPPSPY*FTAKSGSLSNNLDK Trigger: CTTATCAAGGTTGTTTGAGAGACTGCCTGATTTGGCTGTGAACAAGTAAGGAGAGGGTGGAACTAGGTGTTTGTTGTAAGCTTGTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGGACACCAAAGACACTGGAAAATACAGATAACTGCATTACAAATCCACAGAGTGAGAAAGGCAGCTaGTCCACTTATTTCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RGTPKTLENTDNCITNPQSEKGS*STYFSS Trigger: GGAGCTGAAATAAGTGGAGCAGCTGCCTTTCTCACT...CTGTGGATTTGTAATGCAGTTATCTGTATTTTCCAGTGTCTTTGGTGTCCCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTTAGAGTAGTGGTTCTCAACCTATGGGTTCTTGACCTTTCAGGGGGACACCTACAAGAGGCCACTTaGAAAGCAATGGACTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LFRVVVLNLWVLDLSGGHLQEAT*KAMDSS Trigger: AGAAGAGTCCATTGCTTTCCAAGTGGCCTCTTGTAG...GTGTCCCCCTGAAAGGTCAAGAACCCATAGGTTGAGAACCACTACTCTAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTTAAACCAACCTTCTGTAGACCCTCCTTACTCAGTACAGCTACATCATCTGCCCAGTTCTGATTACTaGCTTTCCTTCTTAAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: ILNQPSVDPPYSVQLHHLPSSDY*LSFLKS Trigger: GGACTTTAAGAAGGAAAGTCAGTAATCAGAACTGGG...CAGATGATGTAGCTGTACTGAGTAAGGAGGGTCTACAGAAGGTTGGTTTAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGACTTTTGTCCACAAACACATCTGAAAGTGAACTGGTATGTGTTCACTCAGTACATACTTGTCTCCTaGAGATGGCCAGATAGTAGT | + |
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Preference number: 2 (lower is better) Translates to: TDFCPQTHLKVNWYVFTQYILVS*RWPDSS Trigger: ACTACTATCTGGCCATCTGCAGGAGACAAGTATGTA...CTGAGTGAACACATACCAGTTCACTTTCAGATGTGTTTGTGGACAAAAGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CAA 90 bp | ATTATTTTTCTAGCATTGCCATCCAACAACAGTAGGCGCTGGCTGTaGACGGTCATTTTCAGGCTAAGATGCATAATTAGTTCCATAATG | + |
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Preference number: 2 (lower is better) Translates to: IIFLALPSNNSRRWL*TVIFRLRCIISSIM Trigger: CATTATGGAACTAATTATGCATCTTAGCCTGAAAATGACCGTCAACAGCCAGCGCCTACTGTTGTTGGATGGCAATGCTAGAAAAATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGACTTTTGTCCACAAACACATCTGAAAGTGAACTGGTATGTGTTCACTCAGGCCTGTGCTACAATTTaGTGCGAATTTCCATTGTAT | + |
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Preference number: 2 (lower is better) Translates to: TDFCPQTHLKVNWYVFTQACATI*CEFPLY Trigger: ATACAATGGAAATTCGCAGCAAATTGTAGCACAGGC...CTGAGTGAACACATACCAGTTCACTTTCAGATGTGTTTGTGGACAAAAGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTTACTGTCTGGATTACATATAATCTCCCAAACTCACAATACTGGTAGAGCCGGACACCAAAGACACTaGAAAATACAGATAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: ILLSGLHIISQTHNTGRAGHQRH*KIQITA Trigger: TGCAGTTATCTGTATTTTCCAGTGTCTTTGGTGTCC...GGCTCTACCAGTATTGTGAGTTTGGGAGATTATATGTAATCCAGACAGTAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 72 bp | ATCTGGCAGGAGGGCAGGGGCCTGAGGGGTCCATTCTaGCCTTTCTGTTGTATGTGCCTCTCCAACCTAAAC | + |
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Preference number: 3 (lower is better) Translates to: IWQEGRGLRGPF*PFCCMCLSNLN Trigger: GTTTAGGTTGGAGAGGCACATACAACAGAAAGGCCAGAATGGACCCCTCAGGCCCCTGCCCTCCTGCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 72 bp | GAGCCATCCTGTTCTAGAGATCAGGTTTGGGGCTGGTaGGGCTCTCCTGTGAAATCATACCAGGATCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: EPSCSRDQVWGW*GSPVKSYQDPR Trigger: CCTGGGATCCTGGTATGATTTCACAGGAGAGCCCCACCAGCCCCAAACCTGATCTCTAGAACAGGATGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 72 bp | ATACCTGGAAACCGTGAGAACAATATGAAGGGTATCTaGCAGGAGGGCAGGGGCCTGAGGGGTCCATTCTGG | + |
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Preference number: 3 (lower is better) Translates to: IPGNRENNMKGI*QEGRGLRGPFW Trigger: CCAGAATGGACCCCTCAGGCCCCTGCCCTCCTGCCAGATACCCTTCATATTGTTCTCACGGTTTCCAGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 72 bp | GTAGGACTGACTCTGGCTGCCAGTGAGAAAGGCAGCTaGTCCACTTATTTCAGCTCCTACTGCTACTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: VGLTLAASEKGS*STYFSSYCYCG Trigger: GCCACAGTAGCAGTAGGAGCTGAAATAAGTGGAGCAGCTGCCTTTCTCACTGGCAGCCAGAGTCAGTCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 72 bp | GGCCTGAGGGGTCCATTCTGGCCTTTCTGTTGTATGTaGCTCTCCAACCTAAACATGCTGCCAGGACTTAGC | + |
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Preference number: 3 (lower is better) Translates to: GLRGPFWPFCCM*LSNLNMLPGLS Trigger: GCTAAGTCCTGGCAGCATGTTTAGGTTGGAGAGGCACATACAACAGAAAGGCCAGAATGGACCCCTCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 72 bp | CTTAGAGGTGTGCAACTCCACCCCACCCCCAAATCCTaGCACTGTACTCCAAAGACCAAGGTGATCAAACCC | + |
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Preference number: 3 (lower is better) Translates to: LRGVQLHPTPKS*HCTPKTKVIKP Trigger: GGGTTTGATCACCTTGGTCTTTGGAGTACAGTGCCAGGATTTGGGGGTGGGGTGGAGTTGCACACCTCTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 72 bp | GAAGAGCCATCCTGTTCTAGAGATCAGGTTTGGGGCTaGTGGGGCTCTCCTGTGAAATCATACCAGGATCCC | + |
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Preference number: 3 (lower is better) Translates to: EEPSCSRDQVWG*WGSPVKSYQDP Trigger: GGGATCCTGGTATGATTTCACAGGAGAGCCCCACCAGCCCCAAACCTGATCTCTAGAACAGGATGGCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CAA 90 bp | TATCTGGCAGGAGGGCAGGGGCCTGAGGGGTCCATTCTGGCCTTTCTGTTGTATGCAGCATTAGGAAGGTaGAGAACCAACGGTTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: YLAGGQGPEGSILAFLLYAALGR*RTNGLE Trigger: CTCTAAACCGTTGGTTCTCAACCTTCCTAATGCTGC...ATACAACAGAAAGGCCAGAATGGACCCCTCAGGCCCCTGCCCTCCTGCCAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 72 bp | ATCTACCTACATCATAGGGGACCCGAGAGGGTCAGCTaGAAGGGCACAAACCACTGGACCAGCAAGCAGTTA | + |
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Preference number: 3 (lower is better) Translates to: IYLHHRGPERVS*KGTNHWTSKQL Trigger: TAACTGCTTGCTGGTCCAGTGGTTTGTGCCCTTTCAGCTGACCCTCTCGGGTCCCCTATGATGTAGGTAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 72 bp | CCTACAAGAGGCCACTTGGAAAGCAATGGACTCTTCTaGCCCCTAACCTCTGGGGCAACAATCTCTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: PTRGHLESNGLF*PLTSGATISGA Trigger: TGCTCCAGAGATTGTTGCCCCAGAGGTTAGGGGTCAGAAGAGTCCATTGCTTTCCAAGTGGCCTCTTGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 72 bp | TCGTTAGAGGAAGTGAGTCACTGCAAGGGTAGGCTCTaGGGTCTCCAATGCTCAAGCTACATCCAGTGTCGC | + |
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Preference number: 3 (lower is better) Translates to: SLEEVSHCKGRL*GLQCSSYIQCR Trigger: GCGACACTGGATGTAGCTTGAGCATTGGAGACCTCAGAGCCTACCCTTGCAGTGACTCACTTCCTCTAACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 72 bp | TTGGCCTCACTCTCCACAAAGCTAAACTTAGAGGTGTaGAACTCCACCCCACCCCCAAATCCTGGCACTGTA | + |
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Preference number: 3 (lower is better) Translates to: LASLSTKLNLEV*NSTPPPNPGTV Trigger: TACAGTGCCAGGATTTGGGGGTGGGGTGGAGTTGCACACCTCTAAGTTTAGCTTTGTGGAGAGTGAGGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 72 bp | CTCTTAGCTCCTCCTCCAGCACTTTGTCTGCCTGGATaGTGCCATGCTTCCCACCTTGATAATAATGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LLAPPPALCLPG*CHASHLDNNGL Trigger: CAGTCCATTATTATCAAGGTGGGAAGCATGGCAGCATCCAGGCAGACAAAGTGCTGGAGGAGGAGCTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CAA 90 bp | TATCTGGCAGGAGGGCAGGGGCCTGAGGGGTCCATTCTGGCCTTTCTGTTGTATGAAGTCTGTAATTTCTaGAAATGTCTCACCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: YLAGGQGPEGSILAFLLYEVCNF*KCLTLL Trigger: GAGCAAGGTGAGACATTTCAAGAAATTACAGACTTC...ATACAACAGAAAGGCCAGAATGGACCCCTCAGGCCCCTGCCCTCCTGCCAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 72 bp | TTAGCTCCTCCTCCAGCACTTTGTCTGCCTGGATGCTaGCATGCTTCCCACCTTGATAATAATGGACTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LAPPPALCLPGC*HASHLDNNGLN Trigger: GTTCAGTCCATTATTATCAAGGTGGGAAGCATGGCAGCATCCAGGCAGACAAAGTGCTGGAGGAGGAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 72 bp | ACTCTTCTGACCCCTAACCTCTGGGGCAACAATCTCTaGAGCATCTATATGGTCACATCACCTGTCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: TLLTPNLWGNNL*SIYMVTSPVST Trigger: TGTGCTGACAGGTGATGTGACCATATAGATGCTCCAGAGATTGTTGCCCCAGAGGTTAGGGGTCAGAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 72 bp | ACTTATGAGTCCTACAAGAGGCCACTTGGAAAGCAATaGACTCTTCTGACCCCTAACCTCTGGGGCAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TYESYKRPLGKQ*TLLTPNLWGNN Trigger: ATTGTTGCCCCAGAGGTTAGGGGTCAGAAGAGTCCATTGCTTTCCAAGTGGCCTCTTGTAGGACTCATAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTACTTAAACACACTGTGTAGACTTTATTCTAAGTGGCTCTTCTGCCACAAGTCCTCCTCCAGCACTTaGTCTGCCTGGATGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SYLNTLCRLYSKWLFCHKSSSST*SAWMLP Trigger: TGGCAGCATCCAGGCAGACAAAGTGCTGGAGGAGGA...CTTGTGGCAGAAGAGCCACTTAGAATAAAGTCTACACAGTGTGTTTAAGTAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTACTTAAACACACTGTGTAGACTTTATTCTAAGTGGCTCTTCTGCCACAAGGTCTCCAGCAATCCCTaGGCCTCACTCTCCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SYLNTLCRLYSKWLFCHKVSSNP*ASLSTK Trigger: CTTTGTGGAGAGTGAGGCCAAGGGATTGCTGGAGAC...CTTGTGGCAGAAGAGCCACTTAGAATAAAGTCTACACAGTGTGTTTAAGTAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 72 bp | GAGAAAGGCAGCTGCTCCACTTATTTCAGCTCCTACTaGTACTGTGGCAACCGAGGAAAAGGAAGTAGATAT | + |
|
Preference number: 3 (lower is better) Translates to: EKGSCSTYFSSY*YCGNRGKGSRY Trigger: ATATCTACTTCCTTTTCCTCGGTTGCCACAGTAGCAGTAGGAGCTGAAATAAGTGGAGCAGCTGCCTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CAA 90 bp | CCTTACTTGTTCACAGCCAAATCAGGCAGTCTCTCAAACAACCTTGATAAGTCACCTACAAGAGGCCACTaGGAAAGCAATGGACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PYLFTAKSGSLSNNLDKSPTRGH*ESNGLF Trigger: GAAGAGTCCATTGCTTTCCAAGTGGCCTCTTGTAGG...TGACTTATCAAGGTTGTTTGAGAGACTGCCTGATTTGGCTGTGAACAAGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 72 bp | GATGCTGCCATGCTTCCCACCTTGATAATAATGGACTaGACCTCTGAGACTGTAACCCAGCCCCAATTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: DAAMLPTLIIMD*TSETVTQPQLN Trigger: ATTTAATTGGGGCTGGGTTACAGTCTCAGAGGTTCAGTCCATTATTATCAAGGTGGGAAGCATGGCAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 72 bp | CACACACACACCCATAAACTCTTGTGTTTGAACACATaGCCCATGGAGAATGGCACTGTTAAGAGGTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHKLLCLNT*PMENGTVKRCV Trigger: GACACACCTCTTAACAGTGCCATTCTCCATGGGTCATGTGTTCAAACACAAGAGTTTATGGGTGTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR GCA 72 bp | AACACACTGTGTAGACTTTATTCTAAGTGGCTCTTCTaGCACAAGGAGAGGGTAAGGACCAGAAAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NTLCRLYSKWLF*HKERVRTRKEP Trigger: TGGCTCTTTTCTGGTCCTTACCCTCTCCTTGTGGCAGAAGAGCCACTTAGAATAAAGTCTACACAGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 72 bp | AATGAGGACATAGACTTAGGGTCAGACCTGGCTACCTaGCCTCCAGAGCTTGAAGTGTTATATCTATCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NEDIDLGSDLAT*PPELEVLYLSD Trigger: ATCTGATAGATATAACACTTCAAGCTCTGGAGGTCAGGTAGCCAGGTCTGACCCTAAGTCTATGTCCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CCA 72 bp | TCCTACTTAAACACACTGTGTAGACTTTATTCTAAGTaGCTCTTCTGCCACAAGGAGAGGGTAAGGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SYLNTLCRLYSK*LFCHKERVRTR Trigger: TCTGGTCCTTACCCTCTCCTTGTGGCAGAAGAGCCACTTAGAATAAAGTCTACACAGTGTGTTTAAGTAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTACTTAAACACACTGTGTAGACTTTATTCTAAGTGGCTCTTCTGCCACAAGCAATCTCCGTGGTCCTaGATAGCCTCAAAGAACATC | + |
|
Preference number: 3 (lower is better) Translates to: SYLNTLCRLYSKWLFCHKQSPWS*IASKNI Trigger: GATGTTCTTTGAGGCTATCAAGGACCACGGAGATTG...CTTGTGGCAGAAGAGCCACTTAGAATAAAGTCTACACAGTGTGTTTAAGTAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 72 bp | CACTGTACTCCAAAGACCAAGGTGATCAAACCCCAATaGATAATTAAGTACTCAAGCTACATCACACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: HCTPKTKVIKPQ*IIKYSSYITPD Trigger: GTCTGGTGTGATGTAGCTTGAGTACTTAATTATTCATTGGGGTTTGATCACCTTGGTCTTTGGAGTACAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTTAAACCAACCTTCTGTAGACCCTCCTTACTCAGTACAGCTACATCATCTGTTTAAAAGACTTGCCTaGGTCATAGTGTCTCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ILNQPSVDPPYSVQLHHLFKRLA*VIVSLH Trigger: GTGAAGAGACACTATGACCAAGGCAAGTCTTTTAAA...CAGATGATGTAGCTGTACTGAGTAAGGAGGGTCTACAGAAGGTTGGTTTAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGACTTTTGTCCACAAACACATCTGAAAGTGAACTGGTATGTGTTCACTCAGAGCCTGTGCTACAATTaGCTGCGAATTTCCATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TDFCPQTHLKVNWYVFTQSLCYN*LRISIV Trigger: TACAATGGAAATTCGCAGCAAATTGTAGCACAGGCT...CTGAGTGAACACATACCAGTTCACTTTCAGATGTGTTTGTGGACAAAAGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR TCA 72 bp | AAGATCTCTACCATGCCAGCTCTTCTGAAGGGGCTGTaGTCATTCTATCTTACTGTCTGGATTACATATAAT | + |
|
Preference number: 3 (lower is better) Translates to: KISTMPALLKGL*SFYLTVWITYN Trigger: ATTATATGTAATCCAGACAGTAAGATAGAATGATCACAGCCCCTTCAGAAGAGCTGGCATGGTAGAGATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| CDS-3UTR CCA 90 bp | ATCTCATTCTGTCCCCCAGGCTGTCTCCAGCAATCCCTTGGCCTCACTCTCCACCTTAAGAACTCACCCTaGATCACCTGGGACCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISFCPPGCLQQSLGLTLHLKNSP*ITWDRV Trigger: TACCCGGTCCCAGGTGATCCAGGGTGAGTTCTTAAG...GTGGAGAGTGAGGCCAAGGGATTGCTGGAGACAGCCTGGGGGACAGAATGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| CDS-3UTR TCA 90 bp | ATCTCATTCTGTCCCCCAGGCTGTCTCCAGCAATCCCTTGGCCTCACTCTCCACTCTGGATATGAAAAGTaGCCCAGCACAGCATCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISFCPPGCLQQSLGLTLHSGYEK*PSTASE Trigger: CTCGGATGCTGTGCTGGGTCACTTTTCATATCCAGA...GTGGAGAGTGAGGCCAAGGGATTGCTGGAGACAGCCTGGGGGACAGAATGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| CDS-3UTR TCA 90 bp | TTTAAAGCCTCTGGACTGGTTACGCTTGCTCACACTCACACAGATGTGAACCCAGAATCCAGAACCACATaGGTGAGCTTAAGAACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKASGLVTLAHTHTDVNPESRTT*VSLRTH Trigger: GTGAGTTCTTAAGCTCACTCATGTGGTTCTGGATTC...TGGGTTCACATCTGTGTGAGTGTGAGCAAGCGTAACCAGTCCAGAGGCTTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CAA 72 bp | CTAGCATTGCCATCCAACAACAGTAGGCGCTGGCTGTaGACGGTCATTTTCAGGCTAAGATGCATAATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LALPSNNSRRWL*TVIFRLRCIIS Trigger: ACTAATTATGCATCTTAGCCTGAAAATGACCGTCAACAGCCAGCGCCTACTGTTGTTGGATGGCAATGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| CDS-3UTR GCA 90 bp | TTATTTAGAGTAGTGGTTCTCAACCTATGGGTTCTTGACCTTTCAGGGGGACACACAGCATCCGAGTCATaGCAAAATCGCCAAAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LFRVVVLNLWVLDLSGGHTASES*QNRQRI Trigger: GATTCTTTGGCGATTTTGGCATGACTCGGATGCTGT...GTGTCCCCCTGAAAGGTCAAGAACCCATAGGTTGAGAACCACTACTCTAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CAA 72 bp | CAAGGAGAGGGTAAGGACCAGAAAAGAGCCACTCTCTaGGTCTTTCAATTTTTAAAGCCTCTGGACTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QGEGKDQKRATL*VFQFLKPLDWL Trigger: TAACCAGTCCAGAGGCTTTAAAAATTGAAAGACCAAGAGAGTGGCTCTTTTCTGGTCCTTACCCTCTCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CAA 72 bp | ACTGCATGGAGAAACCTTAAGATTATTTTTCTAGCATaGCCATCCAACAACAGTAGGCGCTGGCTGTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: TAWRNLKIIFLA*PSNNSRRWLLT Trigger: CGTCAACAGCCAGCGCCTACTGTTGTTGGATGGCAATGCTAGAAAAATAATCTTAAGGTTTCTCCATGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CAA 72 bp | ACCCTCCTTACTCAGTACAGCTACATCATCTGTGATTaGAAAAGATTTGACACACACACACACACACCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TLLTQYSYIICD*KRFDTHTHTPI Trigger: TATGGGTGTGTGTGTGTGTGTGTCAAATCTTTTCAAATCACAGATGATGTAGCTGTACTGAGTAAGGAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CAA 72 bp | AGCTGGCAATCACAGCCTTTCTATAGTAACAGACTTTaGTCCACAAACACATCTGAAAGTGAACTGGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SWQSQPFYSNRL*STNTSESELVC Trigger: ACATACCAGTTCACTTTCAGATGTGTTTGTGGACAAAAGTCTGTTACTATAGAAAGGCTGTGATTGCCAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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| 3UTR CAA 72 bp | TGTCTAGCCTGTGCTACAATTTGCTGCGAATTTCCATaGTATGTTACCATCAATAAATGTGGTACTTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLACATICCEFP*YVTINKCGTYC Trigger: ACAGTAAGTACCACATTTATTGATGGTAACATACAATGGAAATTCGCAGCAAATTGTAGCACAGGCTAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135671.8 |
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