Pregenerated sensors for NDUFAF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024082Ensembl transcript IDs: ENSMUST00000024887.6, ENSMUST00000233068.2, ENSMUST00000233777.2, ENSMUST00000233935.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTGGAGAGCTaGCGACTCCTTCCCAGTTACTCCTCCTTCACTTGTGCACAGAAC | + |
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Preference number: 1 (lower is better) Translates to: RGIGILPNPASRVES*RLLPSYSSFTCAQN Trigger: GTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGTCGGCAGCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR CCA 90 bp | TCATCCATAGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTaGAGAGCTGCCGACTCCTTCCCAGTTACTCCTCCTTCACTTGTG | + |
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Preference number: 1 (lower is better) Translates to: SSIEALESFRILLPE*RAADSFPVTPPSLV Trigger: CACAAGTGAAGGAGGAGTAACTGGGAAGGAGTCGGCAGCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCTATGGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR GCA 90 bp | AGTGGAGAGCTGCCGACTCCTTCCCAGTTACTCCTCCTTCACTTGTaGACAGAACAGGAAACTAAGTCTATACTGACGTACTCAGTTAAT | + |
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Preference number: 1 (lower is better) Translates to: SGELPTPSQLLLLHL*TEQETKSILTYSVN Trigger: ATTAACTGAGTACGTCAGTATAGACTTAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGTCGGCAGCTCTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR GCA 90 bp | ACAGCAATTCCCCAGATGGGATCACAGTGTCCTCTAACTGTAGGATaGTGTGATCCAAATGTATACATCTGCATCGTTAGCAGATATCCC | + |
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Preference number: 1 (lower is better) Translates to: TAIPQMGSQCPLTVG*CDPNVYICIVSRYP Trigger: GGGATATCTGCTAACGATGCAGATGTATACATTTGGATCACAGCATCCTACAGTTAGAGGACACTGTGATCCCATCTGGGGAATTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR CCA 90 bp | GTGTATTTATCTGAGAATGAGCTCAGCTTAGGAAGTTGCTCCTCCTaGAGAGTTAACATTACTCTTAATTTTTATTTCAGTAAAAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: VYLSENELSLGSCSS*RVNITLNFYFSKSQ Trigger: CTGACTTTTACTGAAATAAAAATTAAGAGTAATGTTAACTCTCCAGGAGGAGCAACTTCCTAAGCTGAGCTCATTCTCAGATAAATACAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCATAGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTGGAGAGCTGCGGAGGAGGGGGTTTTTaGCTGGCAGGCATTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: IHRGIGILPNPASRVESCGGGGF*LAGIPF Trigger: GAAAGGAATGCCTGCCAGTCAAAAACCCCCTCCTCC...GCAGCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCTATGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCTTCCCAGTTACTCCTCCTTCACTTGTGCACAGAACAGGAAACTAAGTCTCTAGGATTAAAGGCATaGGCCACCACTGCCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TPSQLLLLHLCTEQETKSLGLKA*ATTAQH Trigger: ATGCTGGGCAGTGGTGGCGCATGCCTTTAATCCTAG...AGACTTAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCGCAGATGGCTCACCTGCTTTATCCAAGAGAACCTGAGCGGAAAGAAAGGCCCCAGTCCTTACTTGTaGAAAATTACACCTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LRRWLTCFIQENLSGKKGPSPYL*KITPEA Trigger: GGCTTCAGGTGTAATTTTGCACAAGTAAGGACTGGG...GCCTTTCTTTCCGCTCAGGTTCTCTTGGATAAAGCAGGTGAGCCATCTGCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCATAGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTGGAGAGCTGCCTCCTCCTTCACTTGTaGACAGAACAGGAAACTAAG | + |
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Preference number: 2 (lower is better) Translates to: IHRGIGILPNPASRVESCLLLHL*TEQETK Trigger: CTTAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAG...GCAGCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCTATGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCATAGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTGGAGAGCTGCCCAGATCTGTTGACTTaGAATAGCCATTTACCTTAT | + |
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Preference number: 2 (lower is better) Translates to: IHRGIGILPNPASRVESCPDLLT*NSHLPY Trigger: ATAAGGTAAATGGCTATTTCAAGTCAACAGATCTGG...GCAGCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCTATGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCATAGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTGGAGAGCTGCAAGCTGAAGTATCACTaGCAAACAAGTTCATCAAAC | + |
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Preference number: 2 (lower is better) Translates to: IHRGIGILPNPASRVESCKLKYH*QTSSSN Trigger: GTTTGATGAACTTGTTTGGCAGTGATACTTCAGCTT...GCAGCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCTATGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR TCA 90 bp | TTCATCCATAGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTGGAGAGCATTTTTAAGGCCCACTaGGGAATAAAAGTTCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: FIHRGIGILPNPASRVESIFKAH*GIKVQA Trigger: AGCTTGAACTTTTATTCCTCAGTGGGCCTTAAAAAT...GCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCTATGGATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTTCCCAGTTACTCCTCCTTCACTTGTGCACAGAACAGGAAACTAAGTCTTCTACCAGAATACACTaGCTGCTTTTGCCCTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: TPSQLLLLHLCTEQETKSSTRIH*LLLPFK Trigger: TTTAAAGGGCAAAAGCAGTCAGTGTATTCTGGTAGA...AGACTTAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR TCA 90 bp | CTACCAGAATACACTGACTGCTTTTGCCCTTTAAAAATACCCAGATCTGTTGACACAACAGAGGAGTCATaGTTTCATACCCATGAACGT | + |
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Preference number: 2 (lower is better) Translates to: LPEYTDCFCPLKIPRSVDTTEES*FHTHER Trigger: ACGTTCATGGGTATGAAATCATGACTCCTCTGTTGT...GTCAACAGATCTGGGTATTTTTAAAGGGCAAAAGCAGTCAGTGTATTCTGGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTATTTATCTGAGAATGAGCTCAGCTTAGGAAGTTGCTCCTCCTGGAGAGTTAATACCCAGATCTGTTaGCTTGAAATAGCCATTTAC | + |
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Preference number: 2 (lower is better) Translates to: VYLSENELSLGSCSSWRVNTQIC*LEIAIY Trigger: GTAAATGGCTATTTCAAGTCAACAGATCTGGGTATT...AACTCTCCAGGAGGAGCAACTTCCTAAGCTGAGCTCATTCTCAGATAAATACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCTTCCCAGTTACTCCTCCTTCACTTGTGCACAGAACAGGAAACTAAGTCTCCAGAATACACTGACTaGTTTTGCCCTTTAAAAATA | + |
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Preference number: 2 (lower is better) Translates to: TPSQLLLLHLCTEQETKSPEYTD*FCPLKI Trigger: TATTTTTAAAGGGCAAAAGCAGTCAGTGTATTCTGG...AGACTTAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCATTTACCTTATCTCCAGTTTCTAACAAACCAATCAGTGCTCATATGTGTTAACTGTAGGATGCTGTaGTCCAAATGTATACATCTG | + |
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Preference number: 2 (lower is better) Translates to: SHLPYLQFLTNQSVLICVNCRML*SKCIHL Trigger: CAGATGTATACATTTGGATCACAGCATCCTACAGTT...AACACATATGAGCACTGATTGGTTTGTTAGAAACTGGAGATAAGGTAAATGGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR CCA 72 bp | TGGTTTTCTTGGGCGTATCAGCCTCACATAGAAACTTaGCAAGCTGTGCACACCCCAGTCCTTACTTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: WFSWAYQPHIET*QAVHTPVLTCA Trigger: TGCACAAGTAAGGACTGGGGTGTGCACAGCTTGCCAAGTTTCTATGTGAGGCTGATACGCCCAAGAAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR TCA 72 bp | TGCACACCCCAGTCCTTACTTGTGCAAAATTACACCTaGAGCCTGCTCGCTATAAGAGCATTAACGCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: CTPQSLLVQNYT*SLLAIRALTPV Trigger: CACTGGCGTTAATGCTCTTATAGCGAGCAGGCTTCAGGTGTAATTTTGCACAAGTAAGGACTGGGGTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR GCA 72 bp | CTGCCGACTCCTTCCCAGTTACTCCTCCTTCACTTGTaGACAGAACAGGAAACTAAGTCTATACTGACGTAC | + |
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Preference number: 3 (lower is better) Translates to: LPTPSQLLLLHL*TEQETKSILTY Trigger: GTACGTCAGTATAGACTTAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGTCGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR GCA 72 bp | CTAACTGTAGGATGCTGTGATCCAAATGTATACATCTaGATCGTTAGCAGATATCCCAGGCGATCTGCTCCG | + |
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Preference number: 3 (lower is better) Translates to: LTVGCCDPNVYI*IVSRYPRRSAP Trigger: CGGAGCAGATCGCCTGGGATATCTGCTAACGATGCAGATGTATACATTTGGATCACAGCATCCTACAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR GCA 72 bp | CCCCAGATGGGATCACAGTGTCCTCTAACTGTAGGATaGTGTGATCCAAATGTATACATCTGCATCGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: PQMGSQCPLTVG*CDPNVYICIVS Trigger: GCTAACGATGCAGATGTATACATTTGGATCACAGCATCCTACAGTTAGAGGACACTGTGATCCCATCTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR TCA 72 bp | CTCCGTAACAACAGAGGAGTCATGATTTCATACCCATaGACGTGGTTTTCTTGGGCGTATCAGCCTCACATA | + |
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Preference number: 3 (lower is better) Translates to: LRNNRGVMISYP*TWFSWAYQPHI Trigger: TATGTGAGGCTGATACGCCCAAGAAAACCACGTTCATGGGTATGAAATCATGACTCCTCTGTTGTTACGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR GCA 72 bp | GTGTATTTATCTGAGAATGAGCTCAGCTTAGGAAGTTaGTCCTCCTGGAGAGTTAACATTACTCTTAATTTT | + |
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Preference number: 3 (lower is better) Translates to: VYLSENELSLGS*SSWRVNITLNF Trigger: AAAATTAAGAGTAATGTTAACTCTCCAGGAGGAGCAACTTCCTAAGCTGAGCTCATTCTCAGATAAATACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR TCA 90 bp | AATCCTGCTTCCAGAGTGGAGAGCTGCCGACTCCTTCCCAGTTACTCCTCCTTCCAGACCCAAGCTGACTaGACACCCTCAAAATATCTG | + |
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Preference number: 4 (lower is better) Translates to: NPASRVESCRLLPSYSSFQTQAD*TPSKYL Trigger: CAGATATTTTGAGGGTGTTCAGTCAGCTTGGGTCTG...GAAGGAGGAGTAACTGGGAAGGAGTCGGCAGCTCTCCACTCTGGAAGCAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CCA 90 bp | ATCCATAGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTGGAGAGCTGCCGCTGGGACAGTTCTTaGATGATAACCCCAGCATCG | + |
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Preference number: 4 (lower is better) Translates to: IHRGIGILPNPASRVESCRWDSS*MITPAS Trigger: CGATGCTGGGGTTATCATCCAAGAACTGTCCCAGCG...GCAGCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCTATGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR TCA 90 bp | AATCCTGCTTCCAGAGTGGAGAGCTGCCGACTCCTTCCCAGTTACTCCTCCTTCCCGCGTGGTGTTTTCTaGAATTTATGCACAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: NPASRVESCRLLPSYSSFPRGVF*NLCTGR Trigger: TCTTCCTGTGCATAAATTTCAGAAAACACCACGCGG...GAAGGAGGAGTAACTGGGAAGGAGTCGGCAGCTCTCCACTCTGGAAGCAGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGATGGGATCACAGTGTCCTCTAACTGTAGGATGCTGTGATCCAAATGTACACCCTCAAAATATCTaGTGTGAGGGTGCCCCGACC | + |
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Preference number: 4 (lower is better) Translates to: PQMGSQCPLTVGCCDPNVHPQNI*CEGAPT Trigger: GGTCGGGGCACCCTCACAGCAGATATTTTGAGGGTG...TACATTTGGATCACAGCATCCTACAGTTAGAGGACACTGTGATCCCATCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR CAA 72 bp | GTGGTTTTCTTGGGCGTATCAGCCTCACATAGAAACTaGGCAAGCTGTGCACACCCCAGTCCTTACTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: VVFLGVSASHRN*ASCAHPSPYLC Trigger: GCACAAGTAAGGACTGGGGTGTGCACAGCTTGCCAAGTTTCTATGTGAGGCTGATACGCCCAAGAAAACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR GCA 90 bp | CACACCCCAGTCCTTACTTGTGCAAAATTACACCTGAAGCCTGCTCGCTATAAGTTCCACCAGCTGGAATaGTGGGCTTTTTCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: HTPVLTCAKLHLKPARYKFHQLE*WAFSRG Trigger: GCCTCTGGAAAAAGCCCAGCATTCCAGCTGGTGGAA...CTTATAGCGAGCAGGCTTCAGGTGTAATTTTGCACAAGTAAGGACTGGGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CCA 90 bp | ACTCCTTCCCAGTTACTCCTCCTTCACTTGTGCACAGAACAGGAAACTAAGTCTAGCGTCTCTCTCCAATaGGACCTTCTCCTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TPSQLLLLHLCTEQETKSSVSLQ*DLLLSQ Trigger: CTGGCTGAGGAGAAGGTCCCATTGGAGAGAGACGCT...AGACTTAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| 3UTR CAA 72 bp | GAGCTGCCGACTCCTTCCCAGTTACTCCTCCTTCACTaGTGCACAGAACAGGAAACTAAGTCTATACTGACG | + |
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Preference number: 4 (lower is better) Translates to: ELPTPSQLLLLH*CTEQETKSILT Trigger: CGTCAGTATAGACTTAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGTCGGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR TCA 90 bp | CTTCGCAGATGGCTCACCTGCTTTATCCAAGAGAACCTGAGCGGAAAGAAAGGCGAATCCCAGACTTTGTaGCACCTTTCATGTACACCA | + |
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Preference number: 4 (lower is better) Translates to: LRRWLTCFIQENLSGKKGESQTL*HLSCTP Trigger: TGGTGTACATGAAAGGTGTCACAAAGTCTGGGATTC...GCCTTTCTTTCCGCTCAGGTTCTCTTGGATAAAGCAGGTGAGCCATCTGCGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGATGGGATCACAGTGTCCTCTAACTGTAGGATGCTGTGATCCAAATGTACCAAGTTCCACCAGCTaGAATGCTGGGCTTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PQMGSQCPLTVGCCDPNVPSSTS*NAGLFP Trigger: TGGAAAAAGCCCAGCATTCCAGCTGGTGGAACTTGG...TACATTTGGATCACAGCATCCTACAGTTAGAGGACACTGTGATCCCATCTGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR TCA 90 bp | GTGTATTTATCTGAGAATGAGCTCAGCTTAGGAAGTTGCTCCTCCTGGAGAGTTTTTCATCACGTTGAATaGAGGCTTCTGCAGGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: VYLSENELSLGSCSSWRVFHHVE*RLLQGS Trigger: CGACCCCTGCAGAAGCCTTCATTCAACGTGATGAAA...AACTCTCCAGGAGGAGCAACTTCCTAAGCTGAGCTCATTCTCAGATAAATACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CCA 90 bp | CTACCAGAATACACTGACTGCTTTTGCCCTTTAAAAATACCCAGATCTGTTGACAGCATCGGTGTCACCTaGTTGCTTTCTGCCGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LPEYTDCFCPLKIPRSVDSIGVT*LLSAGS Trigger: TGAGCCGGCAGAAAGCAACCAGGTGACACCGATGCT...GTCAACAGATCTGGGTATTTTTAAAGGGCAAAAGCAGTCAGTGTATTCTGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CCA 90 bp | GTGTATTTATCTGAGAATGAGCTCAGCTTAGGAAGTTGCTCCTCCTGGAGAGTTCACCAGCTGGAATGCTaGGCTTTTTCCAGAGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: VYLSENELSLGSCSSWRVHQLEC*AFSRGY Trigger: ATAGCCTCTGGAAAAAGCCCAGCATTCCAGCTGGTG...AACTCTCCAGGAGGAGCAACTTCCTAAGCTGAGCTCATTCTCAGATAAATACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CCA 90 bp | GTGTATTTATCTGAGAATGAGCTCAGCTTAGGAAGTTGCTCCTCCTGGAGAGTTGCCAGTGTCAGTGCTTaGATCTCACTTAGTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VYLSENELSLGSCSSWRVASVSA*ISLSFW Trigger: CCAGAAACTAAGTGAGATCCAAGCACTGACACTGGC...AACTCTCCAGGAGGAGCAACTTCCTAAGCTGAGCTCATTCTCAGATAAATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR TCA 90 bp | CTACCAGAATACACTGACTGCTTTTGCCCTTTAAAAATACCCAGATCTGTTGACTTCTGCGCAGGTAACTaGAGTCCACATCAGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LPEYTDCFCPLKIPRSVDFCAGN*SPHQLS Trigger: TGACAGCTGATGTGGACTTCAGTTACCTGCGCAGAA...GTCAACAGATCTGGGTATTTTTAAAGGGCAAAAGCAGTCAGTGTATTCTGGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CCA 90 bp | CTACCAGAATACACTGACTGCTTTTGCCCTTTAAAAATACCCAGATCTGTTGACTCGGTACCAGGAGACTaGAATCCCAGACTTTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LPEYTDCFCPLKIPRSVDSVPGD*NPRLCD Trigger: GTCACAAAGTCTGGGATTCCAGTCTCCTGGTACCGA...GTCAACAGATCTGGGTATTTTTAAAGGGCAAAAGCAGTCAGTGTATTCTGGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CCA 90 bp | CACACCCCAGTCCTTACTTGTGCAAAATTACACCTGAAGCCTGCTCGCTATAAGTTCTCTCCATCCGCGTaGTGTTTTCTGAAATTTATG | + |
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Preference number: 4 (lower is better) Translates to: HTPVLTCAKLHLKPARYKFSPSA*CFLKFM Trigger: CATAAATTTCAGAAAACACCACGCGGATGGAGAGAA...CTTATAGCGAGCAGGCTTCAGGTGTAATTTTGCACAAGTAAGGACTGGGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR GCA 90 bp | CTACCAGAATACACTGACTGCTTTTGCCCTTTAAAAATACCCAGATCTGTTGACGGCTACTTTTCCTTGTaGCATTCTGCGCAGGTAACT | + |
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Preference number: 4 (lower is better) Translates to: LPEYTDCFCPLKIPRSVDGYFSL*HSAQVT Trigger: AGTTACCTGCGCAGAATGGCACAAGGAAAAGTAGCC...GTCAACAGATCTGGGTATTTTTAAAGGGCAAAAGCAGTCAGTGTATTCTGGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR GCA 90 bp | AGCCATTTACCTTATCTCCAGTTTCTAACAAACCAATCAGTGCTCATATGTGTTATTTTGTACATAAGATaGCGCAGCATCGGTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: SHLPYLQFLTNQSVLICVILYIR*RSIGVT Trigger: GGTGACACCGATGCTGCGGCATCTTATGTACAAAAT...AACACATATGAGCACTGATTGGTTTGTTAGAAACTGGAGATAAGGTAAATGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS CCA 90 bp | TGTGAGGGTGCCCCGACCAGGGCCAAGTTCCACCAGCTGGAATGCTaGGCTTTTTCCAGAGGCTATCCATTCACTAACAAACCACACCCC | + |
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Preference number: 5 (lower is better) Translates to: CEGAPTRAKFHQLEC*AFSRGYPFTNKPHP Trigger: GGGGTGTGGTTTGTTAGTGAATGGATAGCCTCTGGAAAAAGCCCAGCATTCCAGCTGGTGGAACTTGGCCCTGGTCGGGGCACCCTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS GCA 90 bp | TGCTGTGAGGGTGCCCCGACCAGGGCCAAGTTCCACCAGCTGGAATaGTGGGCTTTTTCCAGAGGCTATCCATTCACTAACAAACCACAC | + |
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Preference number: 5 (lower is better) Translates to: CCEGAPTRAKFHQLE*WAFSRGYPFTNKPH Trigger: GTGTGGTTTGTTAGTGAATGGATAGCCTCTGGAAAAAGCCCAGCATTCCAGCTGGTGGAACTTGGCCCTGGTCGGGGCACCCTCACAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS TCA 90 bp | CCAGCATCGGGACATACTTCCACATGTTCCCTCCTTTCATCACGTTaGATGAAGGCTTCTGCAGGGGTCGCACAAGGCGCCAAGACGAAC | + |
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Preference number: 5 (lower is better) Translates to: PASGHTSTCSLLSSR*MKASAGVAQGAKTN Trigger: GTTCGTCTTGGCGCCTTGTGCGACCCCTGCAGAAGCCTTCATTCAACGTGATGAAAGGAGGGAACATGTGGAAGTATGTCCCGATGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 |
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| CDS CCA 90 bp | ATATCTGCTGTGAGGGTGCCCCGACCAGGGCCAAGTTCCACCAGCTaGAATGCTGGGCTTTTTCCAGAGGCTATCCATTCACTAACAAAC | + |
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Preference number: 5 (lower is better) Translates to: ISAVRVPRPGPSSTS*NAGLFPEAIHSLTN Trigger: GTTTGTTAGTGAATGGATAGCCTCTGGAAAAAGCCCAGCATTCCAGCTGGTGGAACTTGGCCCTGGTCGGGGCACCCTCACAGCAGATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS TCA 90 bp | CATCCTTCAGGTCTCGGTACCAGGAGACTGGAATCCCAGACTTTGTaGCACCTTTCATGTACACCAGGGATTCAGCGTCTCTCTCCAATG | + |
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Preference number: 5 (lower is better) Translates to: HPSGLGTRRLESQTL*HLSCTPGIQRLSPM Trigger: CATTGGAGAGAGACGCTGAATCCCTGGTGTACATGAAAGGTGTCACAAAGTCTGGGATTCCAGTCTCCTGGTACCGAGACCTGAAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS GCA 90 bp | TTTGTACATAAGATGCCGCAGCATCGGTGTCACCTGGTTGCTTTCTaGCGGCTCATTCCCGGAGCTGTAGCATTTCCCTCTCCAAATACA | + |
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Preference number: 5 (lower is better) Translates to: FVHKMPQHRCHLVAF*RLIPGAVAFPSPNT Trigger: TGTATTTGGAGAGGGAAATGCTACAGCTCCGGGAATGAGCCGGCAGAAAGCAACCAGGTGACACCGATGCTGCGGCATCTTATGTACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS GCA 90 bp | TCGGCCACAGTGATGGGACCTGTAGACTTTATTTTGTACATAAGATaGCGCAGCATCGGTGTCACCTGGTTGCTTTCTGCCGGCTCATTC | + |
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Preference number: 5 (lower is better) Translates to: SATVMGPVDFILYIR*RSIGVTWLLSAGSF Trigger: GAATGAGCCGGCAGAAAGCAACCAGGTGACACCGATGCTGCGGCATCTTATGTACAAAATAAAGTCTACAGGTCCCATCACTGTGGCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CCA 90 bp | GCGTCTCTCTCCAATGGGACCTTCTCCTCAGCCAGTGTCAGTGCTTaGATCTCACTTAGTTTCTGGCTCACCTCTACAAGGTGTATTGAG | + |
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Preference number: 5 (lower is better) Translates to: ASLSNGTFSSASVSA*ISLSFWLTSTRCIE Trigger: CTCAATACACCTTGTAGAGGTGAGCCAGAAACTAAGTGAGATCCAAGCACTGACACTGGCTGAGGAGAAGGTCCCATTGGAGAGAGACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CCA 90 bp | GGTCGCACAAGGCGCCAAGACGAACCTCAGTTTATCAGAAGCTTGTaGGTCGACATCAACAAACACTTCTCTCCATCCGCGTGGTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: GRTRRQDEPQFIRSL*VDINKHFSPSAWCF Trigger: AAAACACCACGCGGATGGAGAGAAGTGTTTGTTGATGTCGACCCACAAGCTTCTGATAAACTGAGGTTCGTCTTGGCGCCTTGTGCGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS-3UTR CAA 90 bp | ATCCATAGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTGGAGAGCTGCCCTCCTTTCATCACGTaGAATGAAGGCTTCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: IHRGIGILPNPASRVESCPPFIT*NEGFCR Trigger: CCTGCAGAAGCCTTCATTCAACGTGATGAAAGGAGG...GCAGCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCTATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS GCA 90 bp | TACTTCCACATGTTCCCTCCTTTCATCACGTTGAATGAAGGCTTCTaGAGGGGTCGCACAAGGCGCCAAGACGAACCTCAGTTTATCAGA | + |
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Preference number: 5 (lower is better) Translates to: YFHMFPPFITLNEGF*RGRTRRQDEPQFIR Trigger: TCTGATAAACTGAGGTTCGTCTTGGCGCCTTGTGCGACCCCTGCAGAAGCCTTCATTCAACGTGATGAAAGGAGGGAACATGTGGAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 |
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| CDS CCA 90 bp | GCTGTATCCTTCAGGAACATCCTTCAGGTCTCGGTACCAGGAGACTaGAATCCCAGACTTTGTGACACCTTTCATGTACACCAGGGATTC | + |
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Preference number: 5 (lower is better) Translates to: AVSFRNILQVSVPGD*NPRLCDTFHVHQGF Trigger: GAATCCCTGGTGTACATGAAAGGTGTCACAAAGTCTGGGATTCCAGTCTCCTGGTACCGAGACCTGAAGGATGTTCCTGAAGGATACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CCA 90 bp | ACCTTCTCCTCAGCCAGTGTCAGTGCTTGGATCTCACTTAGTTTCTaGCTCACCTCTACAAGGTGTATTGAGATGGCACAGGTCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFSSASVSAWISLSF*LTSTRCIEMAQVFS Trigger: GCTAAAGACCTGTGCCATCTCAATACACCTTGTAGAGGTGAGCCAGAAACTAAGTGAGATCCAAGCACTGACACTGGCTGAGGAGAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS-3UTR CAA 90 bp | TTCATCCATAGAGGCATTGGAATCCTTCCGAATCCTGCTTCCAGAGTGGAGAGCCCTCTACAAGGTGTATaGAGATGGCACAGGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FIHRGIGILPNPASRVESPLQGV*RWHRSL Trigger: TAAAGACCTGTGCCATCTCAATACACCTTGTAGAGG...GCTCTCCACTCTGGAAGCAGGATTCGGAAGGATTCCAATGCCTCTATGGATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CAA 90 bp | AGCCATTTACCTTATCTCCAGTTTCTAACAAACCAATCAGTGCTCATATGTGTTAGAGGCTACTTTTCCTaGTGCCATTCTGCGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SHLPYLQFLTNQSVLICVRGYFS*CHSAQV Trigger: TACCTGCGCAGAATGGCACAAGGAAAAGTAGCCTCT...AACACATATGAGCACTGATTGGTTTGTTAGAAACTGGAGATAAGGTAAATGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS-3UTR CAA 90 bp | AGCCATTTACCTTATCTCCAGTTTCTAACAAACCAATCAGTGCTCATATGTGTTCCTGTAGACTTTATTTaGTACATAAGATGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHLPYLQFLTNQSVLICVPVDFI*YIRCRS Trigger: GCTGCGGCATCTTATGTACAAAATAAAGTCTACAGG...AACACATATGAGCACTGATTGGTTTGTTAGAAACTGGAGATAAGGTAAATGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233068.2 |
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| CDS CCA 72 bp | GTGAGGGTGCCCCGACCAGGGCCAAGTTCCACCAGCTaGAATGCTGGGCTTTTTCCAGAGGCTATCCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: VRVPRPGPSSTS*NAGLFPEAIHS Trigger: TGAATGGATAGCCTCTGGAAAAAGCCCAGCATTCCAGCTGGTGGAACTTGGCCCTGGTCGGGGCACCCTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS GCA 72 bp | AAGATGCCGCAGCATCGGTGTCACCTGGTTGCTTTCTaGCGGCTCATTCCCGGAGCTGTAGCATTTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: KMPQHRCHLVAF*RLIPGAVAFPS Trigger: AGAGGGAAATGCTACAGCTCCGGGAATGAGCCGGCAGAAAGCAACCAGGTGACACCGATGCTGCGGCATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS GCA 72 bp | GGTGCCCCGACCAGGGCCAAGTTCCACCAGCTGGAATaGTGGGCTTTTTCCAGAGGCTATCCATTCACTAAC | + |
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Preference number: 6 (lower is better) Translates to: GAPTRAKFHQLE*WAFSRGYPFTN Trigger: GTTAGTGAATGGATAGCCTCTGGAAAAAGCCCAGCATTCCAGCTGGTGGAACTTGGCCCTGGTCGGGGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS GCA 72 bp | CACAGACCCAAGCTGACTGAACACCCTCAAAATATCTaGTGTGAGGGTGCCCCGACCAGGGCCAAGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HRPKLTEHPQNI*CEGAPTRAKFH Trigger: GTGGAACTTGGCCCTGGTCGGGGCACCCTCACAGCAGATATTTTGAGGGTGTTCAGTCAGCTTGGGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CAA 90 bp | CCCAGCATCGGGACATACTTCCACATGTTCCCTCCTTTCATCACGTaGAATGAAGGCTTCTGCAGGGGTCGCACAAGGCGCCAAGACGAA | + |
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Preference number: 6 (lower is better) Translates to: PSIGTYFHMFPPFIT*NEGFCRGRTRRQDE Trigger: TTCGTCTTGGCGCCTTGTGCGACCCCTGCAGAAGCCTTCATTCAACGTGATGAAAGGAGGGAACATGTGGAAGTATGTCCCGATGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 |
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| CDS TCA 72 bp | GGACATACTTCCACATGTTCCCTCCTTTCATCACGTTaGATGAAGGCTTCTGCAGGGGTCGCACAAGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: GHTSTCSLLSSR*MKASAGVAQGA Trigger: GGCGCCTTGTGCGACCCCTGCAGAAGCCTTCATTCAACGTGATGAAAGGAGGGAACATGTGGAAGTATGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 |
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| CDS GCA 72 bp | ATGTTCCCTCCTTTCATCACGTTGAATGAAGGCTTCTaGAGGGGTCGCACAAGGCGCCAAGACGAACCTCAG | + |
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Preference number: 6 (lower is better) Translates to: MFPPFITLNEGF*RGRTRRQDEPQ Trigger: CTGAGGTTCGTCTTGGCGCCTTGTGCGACCCCTGCAGAAGCCTTCATTCAACGTGATGAAAGGAGGGAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 |
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| CDS CCA 72 bp | GCCCCGACCAGGGCCAAGTTCCACCAGCTGGAATGCTaGGCTTTTTCCAGAGGCTATCCATTCACTAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: APTRAKFHQLEC*AFSRGYPFTNK Trigger: TTTGTTAGTGAATGGATAGCCTCTGGAAAAAGCCCAGCATTCCAGCTGGTGGAACTTGGCCCTGGTCGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CAA 72 bp | GGGACATACTTCCACATGTTCCCTCCTTTCATCACGTaGAATGAAGGCTTCTGCAGGGGTCGCACAAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: GTYFHMFPPFIT*NEGFCRGRTRR Trigger: GCGCCTTGTGCGACCCCTGCAGAAGCCTTCATTCAACGTGATGAAAGGAGGGAACATGTGGAAGTATGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 |
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| CDS CAA 90 bp | AGGGGTCGCACAAGGCGCCAAGACGAACCTCAGTTTATCAGAAGCTaGTGGGTCGACATCAACAAACACTTCTCTCCATCCGCGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RGRTRRQDEPQFIRS*WVDINKHFSPSAWC Trigger: ACACCACGCGGATGGAGAGAAGTGTTTGTTGATGTCGACCCACAAGCTTCTGATAAACTGAGGTTCGTCTTGGCGCCTTGTGCGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CAA 90 bp | CAGAGTGGAGAGCTGCCGACTCCTTCCCAGTTACTCCTCCTTCACTaGTGCACAGAACAGGAAACTTCAGCCGGACATCAATGCCCATGT | + |
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Preference number: 6 (lower is better) Translates to: QSGELPTPSQLLLLH*CTEQETSAGHQCPC Trigger: ACATGGGCATTGATGTCCGGCTGAAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGTCGGCAGCTCTCCACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233935.2 |
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| CDS TCA 72 bp | GGTCTCGGTACCAGGAGACTGGAATCCCAGACTTTGTaGCACCTTTCATGTACACCAGGGATTCAGCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GLGTRRLESQTL*HLSCTPGIQRL Trigger: GAGACGCTGAATCCCTGGTGTACATGAAAGGTGTCACAAAGTCTGGGATTCCAGTCTCCTGGTACCGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS TCA 72 bp | AGACATCGTGAAGCTGGTGTCCATAAAACCCTTGAATaGAGGCTTCTGCAGGGGTCGCACAAGGCGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: RHREAGVHKTLE*RLLQGSHKAPR Trigger: TCTTGGCGCCTTGTGCGACCCCTGCAGAAGCCTTCATTCAAGGGTTTTATGGACACCAGCTTCACGATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233777.2 |
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| CDS GCA 72 bp | CTGCCGACTCCTTCCCAGTTACTCCTCCTTCACTTGTaGACAGAACAGGAAACTTCAGCCGGACATCAATGC | + |
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Preference number: 6 (lower is better) Translates to: LPTPSQLLLLHL*TEQETSAGHQC Trigger: GCATTGATGTCCGGCTGAAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGTCGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233935.2 |
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| CDS CAA 72 bp | GAGCTGCCGACTCCTTCCCAGTTACTCCTCCTTCACTaGTGCACAGAACAGGAAACTTCAGCCGGACATCAA | + |
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Preference number: 6 (lower is better) Translates to: ELPTPSQLLLLH*CTEQETSAGHQ Trigger: TTGATGTCCGGCTGAAGTTTCCTGTTCTGTGCACAAGTGAAGGAGGAGTAACTGGGAAGGAGTCGGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233935.2 |
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| CDS CCA 72 bp | AGGCGCCAAGACGAACCTCAGTTTATCAGAAGCTTGTaGGTCGACATCAACAAACACTTCTCTCCATCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRQDEPQFIRSL*VDINKHFSPSA Trigger: CGCGGATGGAGAGAAGTGTTTGTTGATGTCGACCCACAAGCTTCTGATAAACTGAGGTTCGTCTTGGCGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CAA 72 bp | TACTCGGCCACAGTGATGGGACCTGTAGACTTTATTTaGTACATAAGATGCCGCAGCATCGGTGTCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: YSATVMGPVDFI*YIRCRSIGVTW Trigger: CCAGGTGACACCGATGCTGCGGCATCTTATGTACAAAATAAAGTCTACAGGTCCCATCACTGTGGCCGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS GCA 72 bp | GTGATGGGACCTGTAGACTTTATTTTGTACATAAGATaGCGCAGCATCGGTGTCACCTGGTTGCTTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VMGPVDFILYIR*RSIGVTWLLSA Trigger: GGCAGAAAGCAACCAGGTGACACCGATGCTGCGGCATCTTATGTACAAAATAAAGTCTACAGGTCCCATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CCA 72 bp | TTCAGGAACATCCTTCAGGTCTCGGTACCAGGAGACTaGAATCCCAGACTTTGTGACACCTTTCATGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: FRNILQVSVPGD*NPRLCDTFHVH Trigger: GTGTACATGAAAGGTGTCACAAAGTCTGGGATTCCAGTCTCCTGGTACCGAGACCTGAAGGATGTTCCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CAA 72 bp | ACAAGGCGCCAAGACGAACCTCAGTTTATCAGAAGCTaGTGGGTCGACATCAACAAACACTTCTCTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TRRQDEPQFIRS*WVDINKHFSPS Trigger: GGATGGAGAGAAGTGTTTGTTGATGTCGACCCACAAGCTTCTGATAAACTGAGGTTCGTCTTGGCGCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CAA 90 bp | TCCTTCATGTACTCGGCCACAGTGATGGGACCTGTAGACTTTATTTaGTACATAAGATGCCGCAGCATCGGTGTCACCTGGTTGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFMYSATVMGPVDFI*YIRCRSIGVTWLLS Trigger: AGAAAGCAACCAGGTGACACCGATGCTGCGGCATCTTATGTACAAAATAAAGTCTACAGGTCCCATCACTGTGGCCGAGTACATGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CAA 72 bp | TCTCACTTAGTTTCTGGCTCACCTCTACAAGGTGTATaGAGATGGCACAGGTCTTTAGCACAGACCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SHLVSGSPLQGV*RWHRSLAQTQA Trigger: AGCTTGGGTCTGTGCTAAAGACCTGTGCCATCTCAATACACCTTGTAGAGGTGAGCCAGAAACTAAGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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| CDS CCA 72 bp | CTAACAAACCACACCCCTAGTAGCTCCCCGAAGATTTaGCTTATTTCAGGTGAAGTAATAAAGTCTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LTNHTPSSSPKI*LISGEVIKSPF Trigger: AAAAGGAGACTTTATTACTTCACCTGAAATAAGCCAAATCTTCGGGGAGCTACTAGGGGTGTGGTTTGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024887.6 ENSMUST00000233068.2 ENSMUST00000233777.2 |
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