Pregenerated sensors for NDUFAF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050323Ensembl transcript IDs: ENSMUST00000058183.9
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAGCTCCAGGCAGTAGAGGTGGGAACCGGGGATGCCTGGCCCGCTaGCCGCCGCCACGCTGCGCCGGACCGCCGAGGGCCCCGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: AAPGSRGGNRGCLAR*PPPRCAGPPRAPAG Trigger: GCCTGCCGGGGCCCTCGGCGGTCCGGCGCAGCGTGGCGGCGGCCAGCGGGCCAGGCATCCCCGGTTCCCACCTCTACTGCCTGGAGCTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 90 bp | GCAGGAAACGCTTCCGCAGGGACGCTTCTGTGGAAGGACCTCGCATaGTTTAGGTGCAAGTGGGCCTGGCTGGCAATGTCATATACTACA | + |
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Preference number: 5 (lower is better) Translates to: AGNASAGTLLWKDLA*FRCKWAWLAMSYTT Trigger: TGTAGTATATGACATTGCCAGCCAGGCCCACTTGCACCTAAAGCATGCGAGGTCCTTCCACAGAAGCGTCCCTGCGGAAGCGTTTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 90 bp | GCTTCCGCAGGGACGCTTCTGTGGAAGGACCTCGCATGCTTTAGGTaGAAGTGGGCCTGGCTGGCAATGTCATATACTACATCTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: ASAGTLLWKDLACFR*KWAWLAMSYTTSLT Trigger: TGTGAGAGATGTAGTATATGACATTGCCAGCCAGGCCCACTTGCACCTAAAGCATGCGAGGTCCTTCCACAGAAGCGTCCCTGCGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 90 bp | CGTGACAATGCCTTGTGCCTTTCCAATGTGGCTTGCAGCATGATCTaGATGAAGATCCTTCACGCCCAGCACCTCCAGTGTCAGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: RDNALCLSNVACSMI*MKILHAQHLQCQVE Trigger: CTCTACCTGACACTGGAGGTGCTGGGCGTGAAGGATCTTCATGCAGATCATGCTGCAAGCCACATTGGAAAGGCACAAGGCATTGTCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 90 bp | TGCTCTCAAGCACGTGACAATGCCTTGTGCCTTTCCAATGTGGCTTaGAGCATGATCTGCATGAAGATCCTTCACGCCCAGCACCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: CSQARDNALCLSNVA*SMICMKILHAQHLQ Trigger: CTGGAGGTGCTGGGCGTGAAGGATCTTCATGCAGATCATGCTGCAAGCCACATTGGAAAGGCACAAGGCATTGTCACGTGCTTGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 90 bp | ATCCATGGGCAGGAACACCTGTCTCCTGCTACTGTGATAGGGTGTTaGTCTCAAGCACGTGACAATGCCTTGTGCCTTTCCAATGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: IHGQEHLSPATVIGC*SQARDNALCLSNVA Trigger: AGCCACATTGGAAAGGCACAAGGCATTGTCACGTGCTTGAGAGCAACACCCTATCACAGTAGCAGGAGACAGGTGTTCCTGCCCATGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS TCA 90 bp | ACACCTGTCTCCTGCTACTGTGATAGGGTGTTGCTCTCAAGCACGTaGCAATGCCTTGTGCCTTTCCAATGTGGCTTGCAGCATGATCTG | + |
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Preference number: 5 (lower is better) Translates to: TPVSCYCDRVLLSST*QCLVPFQCGLQHDL Trigger: CAGATCATGCTGCAAGCCACATTGGAAAGGCACAAGGCATTGTCACGTGCTTGAGAGCAACACCCTATCACAGTAGCAGGAGACAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 90 bp | GTAGAAAGTCCTCTTGTGAAACACCATGCTGCACACAGACATCCATaGGCAGGAACACCTGTCTCCTGCTACTGTGATAGGGTGTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: VESPLVKHHAAHRHP*AGTPVSCYCDRVLL Trigger: GAGCAACACCCTATCACAGTAGCAGGAGACAGGTGTTCCTGCCCATGGATGTCTGTGTGCAGCATGGTGTTTCACAAGAGGACTTTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 90 bp | TTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCTaGACACAGACATCCATGGGCAGGAACACCTGTCTCCTGCTACTG | + |
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Preference number: 5 (lower is better) Translates to: LSWFLRRKSSCETPC*TQTSMGRNTCLLLL Trigger: CAGTAGCAGGAGACAGGTGTTCCTGCCCATGGATGTCTGTGTGCAGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 90 bp | GCTACTGTGATAGGGTGTTGCTCTCAAGCACGTGACAATGCCTTGTaGCTTTCCAATGTGGCTTGCAGCATGATCTGCATGAAGATCCTT | + |
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Preference number: 5 (lower is better) Translates to: ATVIGCCSQARDNAL*LSNVACSMICMKIL Trigger: AAGGATCTTCATGCAGATCATGCTGCAAGCCACATTGGAAAGGCACAAGGCATTGTCACGTGCTTGAGAGCAACACCCTATCACAGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | GGCAGTAGAGGTGGGAACCGGGGATGCCTGGCCCGCTaGCCGCCGCCACGCTGCGCCGGACCGCCGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSRGGNRGCLAR*PPPRCAGPPRA Trigger: GGCCCTCGGCGGTCCGGCGCAGCGTGGCGGCGGCCAGCGGGCCAGGCATCCCCGGTTCCCACCTCTACTGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | CAGCTCCAGGCAGTAGAGGTGGGAACCGGGGATGCCTaGCCCGCTGGCCGCCGCCACGCTGCGCCGGACCGC | + |
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Preference number: 6 (lower is better) Translates to: QLQAVEVGTGDA*PAGRRHAAPDR Trigger: GCGGTCCGGCGCAGCGTGGCGGCGGCCAGCGGGCCAGGCATCCCCGGTTCCCACCTCTACTGCCTGGAGCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | AGGCGCCGCACACGTTCCCACGCATCCCGAGGCGGCTaGCGATGGAACAGGTTAGCCAAACCGAATGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: RRRTRSHASRGG*RWNRLAKPNGL Trigger: AAGGCCATTCGGTTTGGCTAACCTGTTCCATCGCCAGCCGCCTCGGGATGCGTGGGAACGTGTGCGGCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | AGGCGGCTGGCGATGGAACAGGTTAGCCAAACCGAATaGCCTTGGGCCGCGGACAGAACCCAGCATGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RRLAMEQVSQTE*PWAADRTQHGG Trigger: ACCTCCATGCTGGGTTCTGTCCGCGGCCCAAGGCCATTCGGTTTGGCTAACCTGTTCCATCGCCAGCCGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 72 bp | GCTTCCGCAGGGACGCTTCTGTGGAAGGACCTCGCATaGTTTAGGTGCAAGTGGGCCTGGCTGGCAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: ASAGTLLWKDLA*FRCKWAWLAMS Trigger: TGACATTGCCAGCCAGGCCCACTTGCACCTAAAGCATGCGAGGTCCTTCCACAGAAGCGTCCCTGCGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | AGAAAAGCAGGAAACGCTTCCGCAGGGACGCTTCTGTaGAAGGACCTCGCATGCTTTAGGTGCAAGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RKAGNASAGTLL*KDLACFRCKWA Trigger: GGCCCACTTGCACCTAAAGCATGCGAGGTCCTTCCACAGAAGCGTCCCTGCGGAAGCGTTTCCTGCTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 72 bp | GGGACGCTTCTGTGGAAGGACCTCGCATGCTTTAGGTaGAAGTGGGCCTGGCTGGCAATGTCATATACTACA | + |
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Preference number: 6 (lower is better) Translates to: GTLLWKDLACFR*KWAWLAMSYTT Trigger: TGTAGTATATGACATTGCCAGCCAGGCCCACTTGCACCTAAAGCATGCGAGGTCCTTCCACAGAAGCGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | GACAGCCTTCCAGAGTTCAATGGCCACCGGCTGGTGTaGTGGGTTGTCACAGTACATATCTTCCACAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: DSLPEFNGHRLV*WVVTVHIFHSF Trigger: AAAGCTGTGGAAGATATGTACTGTGACAACCCACCACACCAGCCGGTGGCCATTGAACTCTGGAAGGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | CCTCTTGTGAAACACCATGCTGCACACAGACATCCATaGGCAGGAACACCTGTCTCCTGCTACTGTGATAGG | + |
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Preference number: 6 (lower is better) Translates to: PLVKHHAAHRHP*AGTPVSCYCDR Trigger: CCTATCACAGTAGCAGGAGACAGGTGTTCCTGCCCATGGATGTCTGTGTGCAGCATGGTGTTTCACAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS TCA 72 bp | TCCTGCTACTGTGATAGGGTGTTGCTCTCAAGCACGTaGCAATGCCTTGTGCCTTTCCAATGTGGCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SCYCDRVLLSST*QCLVPFQCGLQ Trigger: CTGCAAGCCACATTGGAAAGGCACAAGGCATTGTCACGTGCTTGAGAGCAACACCCTATCACAGTAGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 72 bp | TTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCTaGACACAGACATCCATGGGCAGGAACACCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: FLRRKSSCETPC*TQTSMGRNTCL Trigger: GAGACAGGTGTTCCTGCCCATGGATGTCTGTGTGCAGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | TTCTTGACAGCCTTCCAGAGTTCAATGGCCACCGGCTaGTGTGGTGGGTTGTCACAGTACATATCTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: FLTAFQSSMATG*CGGLSQYISST Trigger: TGTGGAAGATATGTACTGTGACAACCCACCACACCAGCCGGTGGCCATTGAACTCTGGAAGGCTGTCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | CTTCTGTGGAAGGACCTCGCATGCTTTAGGTGCAAGTaGGCCTGGCTGGCAATGTCATATACTACATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LLWKDLACFRCK*AWLAMSYTTSL Trigger: GAGAGATGTAGTATATGACATTGCCAGCCAGGCCCACTTGCACCTAAAGCATGCGAGGTCCTTCCACAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CAA 72 bp | GTGATAGGGTGTTGCTCTCAAGCACGTGACAATGCCTaGTGCCTTTCCAATGTGGCTTGCAGCATGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: VIGCCSQARDNA*CLSNVACSMIC Trigger: GCAGATCATGCTGCAAGCCACATTGGAAAGGCACAAGGCATTGTCACGTGCTTGAGAGCAACACCCTATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CAA 90 bp | CCTGCTACTGTGATAGGGTGTTGCTCTCAAGCACGTGACAATGCCTaGTGCCTTTCCAATGTGGCTTGCAGCATGATCTGCATGAAGATC | + |
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Preference number: 6 (lower is better) Translates to: PATVIGCCSQARDNA*CLSNVACSMICMKI Trigger: GATCTTCATGCAGATCATGCTGCAAGCCACATTGGAAAGGCACAAGGCATTGTCACGTGCTTGAGAGCAACACCCTATCACAGTAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS GCA 72 bp | ATAGGGTGTTGCTCTCAAGCACGTGACAATGCCTTGTaGCTTTCCAATGTGGCTTGCAGCATGATCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: IGCCSQARDNAL*LSNVACSMICM Trigger: CATGCAGATCATGCTGCAAGCCACATTGGAAAGGCACAAGGCATTGTCACGTGCTTGAGAGCAACACCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CCA 72 bp | TGGAAGGACCTCGCATGCTTTAGGTGCAAGTGGGCCTaGCTGGCAATGTCATATACTACATCTCTCACATTT | + |
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Preference number: 6 (lower is better) Translates to: WKDLACFRCKWA*LAMSYTTSLTF Trigger: AAATGTGAGAGATGTAGTATATGACATTGCCAGCCAGGCCCACTTGCACCTAAAGCATGCGAGGTCCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CAA 90 bp | TCATCAATGATTCTCATGAGCCACCTTTTAGTTAGGTTATGTTTCTaGACAGCCTTCCAGAGTTCAATGGCCACCGGCTGGTGTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SSMILMSHLLVRLCF*TAFQSSMATGWCGG Trigger: CCCACCACACCAGCCGGTGGCCATTGAACTCTGGAAGGCTGTCAAGAAACATAACCTAACTAAAAGGTGGCTCATGAGAATCATTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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| CDS CAA 72 bp | ATTCTCATGAGCCACCTTTTAGTTAGGTTATGTTTCTaGACAGCCTTCCAGAGTTCAATGGCCACCGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ILMSHLLVRLCF*TAFQSSMATGW Trigger: CCAGCCGGTGGCCATTGAACTCTGGAAGGCTGTCAAGAAACATAACCTAACTAAAAGGTGGCTCATGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058183.9 |
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