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Pregenerated sensors for NDUFAF5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027384

Ensembl transcript IDs: ENSMUST00000044825.5

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGGGCGAGGTGCTGCCCGAAGGAGGGACACCAGAAGCGACCTCCCTaGGACTGCCGCTCGATGCAGAGACCGCTGGCCGGCCAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: WARCCPKEGHQKRPP*DCRSMQRPLAGQAV
Trigger: CACTGCTTGGCCGGCCAGCGGTCTCTGCATCGAGCGGCAGTCGCAGGGAGGTCGCTTCTGGTGTCCCTCCTTCGGGCAGCACCTCGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS GCA 90 bp TCCTCTTCAATTCCCTGTCGAAGATGTTTAGGGCTCTGGGCGAGGTaGTGCCCGAAGGAGGGACACCAGAAGCGACCTCCCTGCGACTGC +
Preference number: 5 (lower is better)
Translates to: SSSIPCRRCLGLWAR*CPKEGHQKRPPCDC
Trigger: GCAGTCGCAGGGAGGTCGCTTCTGGTGTCCCTCCTTCGGGCAGCACCTCGCCCAGAGCCCTAAACATCTTCGACAGGGAATTGAAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 90 bp TCTTCTGCTTCCTCTTCAATTCCCTGTCGAAGATGTTTAGGGCTCTaGGCGAGGTGCTGCCCGAAGGAGGGACACCAGAAGCGACCTCCC +
Preference number: 5 (lower is better)
Translates to: SSASSSIPCRRCLGL*ARCCPKEGHQKRPP
Trigger: GGGAGGTCGCTTCTGGTGTCCCTCCTTCGGGCAGCACCTCGCCCAGAGCCCTAAACATCTTCGACAGGGAATTGAAGAGGAAGCAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 90 bp CTGCAATCCGACTTCCAACCTCCTCCTTCAGGTAGTCAAATTTCATaGGGTCGGGCTGCCGGGCGGCCCAATTCTTCTGCTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LQSDFQPPPSGSQIS*GRAAGRPNSSASSS
Trigger: TGAAGAGGAAGCAGAAGAATTGGGCCGCCCGGCAGCCCGACCCCATGAAATTTGACTACCTGAAGGAGGAGGTTGGAAGTCGGATTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS GCA 90 bp GGAACCATCCTCATTCCGGTACATTTCTCTGTAAACCGCTGCAGCTaGCAGCATTGTGTCTCGGTGCAGCAGGGCTTTTCTGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: GTILIPVHFSVNRCS*QHCVSVQQGFSVPR
Trigger: TCTTGGAACAGAAAAGCCCTGCTGCACCGAGACACAATGCTGGCAGCTGCAGCGGTTTACAGAGAAATGTACCGGAATGAGGATGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS GCA 90 bp AGGTATGGAACCATCCTCATTCCGGTACATTTCTCTGTAAACCGCTaGAGCTGCCAGCATTGTGTCTCGGTGCAGCAGGGCTTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RYGTILIPVHFSVNR*SCQHCVSVQQGFSV
Trigger: AACAGAAAAGCCCTGCTGCACCGAGACACAATGCTGGCAGCTGCAGCGGTTTACAGAGAAATGTACCGGAATGAGGATGGTTCCATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 90 bp GGTATTTCCATCCTATCATGTGGTAGATCTGAAAGGTGGCAGGTATaGAACCATCCTCATTCCGGTACATTTCTCTGTAAACCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GISILSCGRSERWQV*NHPHSGTFLCKPLQ
Trigger: CTGCAGCGGTTTACAGAGAAATGTACCGGAATGAGGATGGTTCCATACCTGCCACCTTTCAGATCTACCACATGATAGGATGGAAATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 90 bp GAGAGTCATGGTATTTCCATCCTATCATGTGGTAGATCTGAAAGGTaGCAGGTATGGAACCATCCTCATTCCGGTACATTTCTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: ESHGISILSCGRSER*QVWNHPHSGTFLCK
Trigger: TTTACAGAGAAATGTACCGGAATGAGGATGGTTCCATACCTGCCACCTTTCAGATCTACCACATGATAGGATGGAAATACCATGACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 90 bp TCTGTTTCTAAAGAATTTTTCAAAGCATGCTCTGCAATGTCTGTTTaGAAGATCTTTCCCACAGTCTCCTTATCCAAATGTTGTGCTATG +
Preference number: 5 (lower is better)
Translates to: SVSKEFFKACSAMSV*KIFPTVSLSKCCAM
Trigger: CATAGCACAACATTTGGATAAGGAGACTGTGGGAAAGATCTTCCAAACAGACATTGCAGAGCATGCTTTGAAAAATTCTTTAGAAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 72 bp GACCTCCCTGCGACTGCCGCTCGATGCAGAGACCGCTaGCCGGCCAAGCAGTGGGCAGAGGCGCAAAAGAAC +
Preference number: 6 (lower is better)
Translates to: DLPATAARCRDR*PAKQWAEAQKN
Trigger: GTTCTTTTGCGCCTCTGCCCACTGCTTGGCCGGCCAGCGGTCTCTGCATCGAGCGGCAGTCGCAGGGAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS GCA 72 bp ATTCCCTGTCGAAGATGTTTAGGGCTCTGGGCGAGGTaGTGCCCGAAGGAGGGACACCAGAAGCGACCTCCC +
Preference number: 6 (lower is better)
Translates to: IPCRRCLGLWAR*CPKEGHQKRPP
Trigger: GGGAGGTCGCTTCTGGTGTCCCTCCTTCGGGCAGCACCTCGCCCAGAGCCCTAAACATCTTCGACAGGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 72 bp TCCTCTTCAATTCCCTGTCGAAGATGTTTAGGGCTCTaGGCGAGGTGCTGCCCGAAGGAGGGACACCAGAAG +
Preference number: 6 (lower is better)
Translates to: SSSIPCRRCLGL*ARCCPKEGHQK
Trigger: CTTCTGGTGTCCCTCCTTCGGGCAGCACCTCGCCCAGAGCCCTAAACATCTTCGACAGGGAATTGAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 72 bp GACTTCCAACCTCCTCCTTCAGGTAGTCAAATTTCATaGGGTCGGGCTGCCGGGCGGCCCAATTCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: DFQPPPSGSQIS*GRAAGRPNSSA
Trigger: AGCAGAAGAATTGGGCCGCCCGGCAGCCCGACCCCATGAAATTTGACTACCTGAAGGAGGAGGTTGGAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS GCA 72 bp TTCATGGGGTCGGGCTGCCGGGCGGCCCAATTCTTCTaGTTCCTCTTCAATTCCCTGTCGAAGATGTTTAGG +
Preference number: 6 (lower is better)
Translates to: FMGSGCRAAQFF*FLFNSLSKMFR
Trigger: CCTAAACATCTTCGACAGGGAATTGAAGAGGAAGCAGAAGAATTGGGCCGCCCGGCAGCCCGACCCCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS GCA 72 bp CTCATTCCGGTACATTTCTCTGTAAACCGCTGCAGCTaGCAGCATTGTGTCTCGGTGCAGCAGGGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: LIPVHFSVNRCS*QHCVSVQQGFS
Trigger: AGAAAAGCCCTGCTGCACCGAGACACAATGCTGGCAGCTGCAGCGGTTTACAGAGAAATGTACCGGAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CAA 90 bp CCTCATTCCGGTACATTTCTCTGTAAACCGCTGCAGCTGCCAGCATaGTGTCTCGGTGCAGCAGGGCTTTTCTGTTCCAAGAACAGTTGC +
Preference number: 6 (lower is better)
Translates to: PHSGTFLCKPLQLPA*CLGAAGLFCSKNSC
Trigger: GCAACTGTTCTTGGAACAGAAAAGCCCTGCTGCACCGAGACACAATGCTGGCAGCTGCAGCGGTTTACAGAGAAATGTACCGGAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS GCA 72 bp AAGGGGAAAGTCTCTGGCTATGTCATAAACACGGTCTaGAATCCGACTTCCAACCTCCTCCTTCAGGTAGTC +
Preference number: 6 (lower is better)
Translates to: KGKVSGYVINTV*NPTSNLLLQVV
Trigger: GACTACCTGAAGGAGGAGGTTGGAAGTCGGATTGCAGACCGTGTTTATGACATAGCCAGAGACTTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CAA 90 bp AATGTCTGTTTGGAAGATCTTTCCCACAGTCTCCTTATCCAAATGTaGTGCTATGTAGCCTCTTCCACATCCTATGTCCAGGGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: NVCLEDLSHSLLIQM*CYVASSTSYVQGKG
Trigger: CCCCTTGCCCTGGACATAGGATGTGGAAGAGGCTACATAGCACAACATTTGGATAAGGAGACTGTGGGAAAGATCTTCCAAACAGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CAA 72 bp CATCATTTAGTTTTGCTAGCTCTCCAAATGACACGGTaGCAGAACCTCTTTCAGCTGGCCTTGCCTGAGAGT +
Preference number: 6 (lower is better)
Translates to: HHLVLLALQMTR*QNLFQLALPES
Trigger: ACTCTCAGGCAAGGCCAGCTGAAAGAGGTTCTGCAACCGTGTCATTTGGAGAGCTAGCAAAACTAAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 72 bp GGTATTTCCATCCTATCATGTGGTAGATCTGAAAGGTaGCAGGTATGGAACCATCCTCATTCCGGTACATTT +
Preference number: 6 (lower is better)
Translates to: GISILSCGRSER*QVWNHPHSGTF
Trigger: AAATGTACCGGAATGAGGATGGTTCCATACCTGCCACCTTTCAGATCTACCACATGATAGGATGGAAATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CAA 72 bp TTGGAAGATCTTTCCCACAGTCTCCTTATCCAAATGTaGTGCTATGTAGCCTCTTCCACATCCTATGTCCAG +
Preference number: 6 (lower is better)
Translates to: LEDLSHSLLIQM*CYVASSTSYVQ
Trigger: CTGGACATAGGATGTGGAAGAGGCTACATAGCACAACATTTGGATAAGGAGACTGTGGGAAAGATCTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CAA 90 bp GCTGTAATGAACACCGGAGTTCATAGAGTGTGTCGCCTCCAAACATaGCACCAACAAACACCCCATCTGGTTTTAAGACATAATGAATCT +
Preference number: 6 (lower is better)
Translates to: AVMNTGVHRVCRLQT*HQQTPHLVLRHNES
Trigger: AGATTCATTATGTCTTAAAACCAGATGGGGTGTTTGTTGGTGCAATGTTTGGAGGCGACACACTCTATGAACTCCGGTGTTCATTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 72 bp ATCCTATCATGTGGTAGATCTGAAAGGTGGCAGGTATaGAACCATCCTCATTCCGGTACATTTCTCTGTAAA +
Preference number: 6 (lower is better)
Translates to: ILSCGRSERWQV*NHPHSGTFLCK
Trigger: TTTACAGAGAAATGTACCGGAATGAGGATGGTTCCATACCTGCCACCTTTCAGATCTACCACATGATAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5
CDS CCA 72 bp AAAGAATTTTTCAAAGCATGCTCTGCAATGTCTGTTTaGAAGATCTTTCCCACAGTCTCCTTATCCAAATGT +
Preference number: 6 (lower is better)
Translates to: KEFFKACSAMSV*KIFPTVSLSKC
Trigger: ACATTTGGATAAGGAGACTGTGGGAAAGATCTTCCAAACAGACATTGCAGAGCATGCTTTGAAAAATTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044825.5