RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDUFAF3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070283

Ensembl transcript IDs: ENSMUST00000074208.6, ENSMUST00000194381.2

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTCCAGGAGGGGGAATGAGGGCAGCTCCTGTCACTCGACCTTCGTaGCACAGGAAGTTGAAAGTGGCACAGGCATTGGGCGTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: SPGGGMRAAPVTRPS*HRKLKVAQALGVSW
Trigger: CCAGGACACGCCCAATGCCTGTGCCACTTTCAACTTCCTGTGCCACGAAGGTCGAGTGACAGGAGCTGCCCTCATTCCCCCTCCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
3UTR CCA 90 bp AGTCTCATTTGTGACAGAGCCTTGGGCCATGCCCTGTGGACTTCATaGACCTGTAGTTCTACTTCTAAAGAAGTTGGGAAAGCTATTGGG +
Preference number: 1 (lower is better)
Translates to: SLICDRALGHALWTS*TCSSTSKEVGKAIG
Trigger: CCCAATAGCTTTCCCAACTTCTTTAGAAGTAGAACTACAGGTCCATGAAGTCCACAGGGCATGGCCCAAGGCTCTGTCACAAATGAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR CCA 90 bp ACCATCACACATGTTCATAGCATAGTCTCATTTGTGACAGAGCCTTaGGCCATGCCCTGTGGACTTCATGGACCTGTAGTTCTACTTCTA +
Preference number: 1 (lower is better)
Translates to: TITHVHSIVSFVTEP*AMPCGLHGPVVLLL
Trigger: TAGAAGTAGAACTACAGGTCCATGAAGTCCACAGGGCATGGCCCAAGGCTCTGTCACAAATGAGACTATGCTATGAACATGTGTGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR CAA 90 bp GGAATGAGGGCAGCTCCTGTCACTCGACCTTCGTGGCACAGGAAGTaGAAAGTGGCACAGGCATTGGGCGTGTCCTGGACCTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: GMRAAPVTRPSWHRK*KVAQALGVSWTSTA
Trigger: TGCTGTGGAGGTCCAGGACACGCCCAATGCCTGTGCCACTTTCAACTTCCTGTGCCACGAAGGTCGAGTGACAGGAGCTGCCCTCATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
3UTR-3UTR CCA 90 bp TGTGTCATTCTGAGGCTTGACCCAAAGAAGCCAGTGCAGTCTCTCCAGGAGGGGGTCACTCGACCTTCGTaGCACAGGAAGTTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: CVILRLDPKKPVQSLQEGVTRPS*HRKLKV
Trigger: CACTTTCAACTTCCTGTGCCACGAAGGTCGAGTGAC...CCCCTCCTGGAGAGACTGCACTGGCTTCTTTGGGTCAAGCCTCAGAATGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
3UTR-3UTR TCA 90 bp GAGCCTTGGGCCATGCCCTGTGGACTTCATGGACCTGTAGTTCTACTTCTAAAGCGTCAGCAGCCAAACTaGGCAACAAAAATATGTAAG +
Preference number: 2 (lower is better)
Translates to: EPWAMPCGLHGPVVLLLKRQQPN*ATKICK
Trigger: CTTACATATTTTTGTTGCTCAGTTTGGCTGCTGACG...CTTTAGAAGTAGAACTACAGGTCCATGAAGTCCACAGGGCATGGCCCAAGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR-3UTR TCA 90 bp GAGGAGTATAAATTATTATCCTGGGTGAGCATGACAAGTGTGGAGAAAGCGTTGCGTGGCACAGGAAGTTaGAAGTGGCACAGGCATTGG +
Preference number: 2 (lower is better)
Translates to: EEYKLLSWVSMTSVEKALRGTGS*KWHRHW
Trigger: CCAATGCCTGTGCCACTTTCAACTTCCTGTGCCACG...CAACGCTTTCTCCACACTTGTCATGCTCACCCAGGATAATAATTTATACTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
3UTR-3UTR GCA 90 bp TTGGGCCATGCCCTGTGGACTTCATGGACCTGTAGTTCTACTTCTAAAGAAGTTAAAGCGTTGAGAGCATaGAGTGCCCTCCTTGATGGT +
Preference number: 2 (lower is better)
Translates to: LGHALWTSWTCSSTSKEVKALRA*SALLDG
Trigger: ACCATCAAGGAGGGCACTGCATGCTCTCAACGCTTT...AACTTCTTTAGAAGTAGAACTACAGGTCCATGAAGTCCACAGGGCATGGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR CAA 90 bp ATGCCCTGTGGACTTCATGGACCTGTAGTTCTACTTCTAAAGAAGTaGGGAAAGCTATTGGGGTCTCCTCAAATCTGCCTCCTAGCCTTT +
Preference number: 2 (lower is better)
Translates to: MPCGLHGPVVLLLKK*GKLLGSPQICLLAF
Trigger: AAAGGCTAGGAGGCAGATTTGAGGAGACCCCAATAGCTTTCCCAACTTCTTTAGAAGTAGAACTACAGGTCCATGAAGTCCACAGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR-3UTR CCA 90 bp TGTGTCATTCTGAGGCTTGACCCAAAGAAGCCAGTGCAGTCTCTCCAGGAGGGGTATAAATTATTATCCTaGGTGAGCATGACAAGTGTG +
Preference number: 2 (lower is better)
Translates to: CVILRLDPKKPVQSLQEGYKLLS*VSMTSV
Trigger: CACACTTGTCATGCTCACCCAGGATAATAATTTATA...CCCCTCCTGGAGAGACTGCACTGGCTTCTTTGGGTCAAGCCTCAGAATGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
3UTR-3UTR CCA 90 bp TTGGGCCATGCCCTGTGGACTTCATGGACCTGTAGTTCTACTTCTAAAGAAGTTTATAAATTATTATCCTaGGTGAGCATGACAAGTGTG +
Preference number: 2 (lower is better)
Translates to: LGHALWTSWTCSSTSKEVYKLLS*VSMTSV
Trigger: CACACTTGTCATGCTCACCCAGGATAATAATTTATA...AACTTCTTTAGAAGTAGAACTACAGGTCCATGAAGTCCACAGGGCATGGCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR-3UTR CCA 90 bp CTTCATGGACCTGTAGTTCTACTTCTAAAGAAGTTGGGAAAGCTATTGGGGTCTATATCCTACATTGTCTaGGTGAAAACAACCCTTAGT +
Preference number: 2 (lower is better)
Translates to: LHGPVVLLLKKLGKLLGSISYIV*VKTTLS
Trigger: ACTAAGGGTTGTTTTCACCCAGACAATGTAGGATAT...AGACCCCAATAGCTTTCCCAACTTCTTTAGAAGTAGAACTACAGGTCCATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR TCA 72 bp CCAAAGAAGCCAGTGCAGTCTCTCCAGGAGGGGGAATaGGGGCAGCTCCTGTCACTCGACCTTCGTGGCACA +
Preference number: 3 (lower is better)
Translates to: PKKPVQSLQEGE*GQLLSLDLRGT
Trigger: TGTGCCACGAAGGTCGAGTGACAGGAGCTGCCCTCATTCCCCCTCCTGGAGAGACTGCACTGGCTTCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
3UTR CCA 72 bp GGGGGAATGAGGGCAGCTCCTGTCACTCGACCTTCGTaGCACAGGAAGTTGAAAGTGGCACAGGCATTGGGC +
Preference number: 3 (lower is better)
Translates to: GGMRAAPVTRPS*HRKLKVAQALG
Trigger: GCCCAATGCCTGTGCCACTTTCAACTTCCTGTGCCACGAAGGTCGAGTGACAGGAGCTGCCCTCATTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
3UTR TCA 72 bp GCAGTGCCCTCCTTGATGGTTCCTGATGTGTCATTCTaGGGCTTGACCCAAAGAAGCCAGTGCAGTCTCTCC +
Preference number: 3 (lower is better)
Translates to: AVPSLMVPDVSF*GLTQRSQCSLS
Trigger: GGAGAGACTGCACTGGCTTCTTTGGGTCAAGCCTCAGAATGACACATCAGGAACCATCAAGGAGGGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
3UTR TCA 72 bp GCGTTGAGAGCATGCAGTGCCCTCCTTGATGGTTCCTaGTGTGTCATTCTGAGGCTTGACCCAAAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: ALRACSALLDGS*CVILRLDPKKP
Trigger: TGGCTTCTTTGGGTCAAGCCTCAGAATGACACATCAGGAACCATCAAGGAGGGCACTGCATGCTCTCAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
3UTR CCA 72 bp CATGTTCATAGCATAGTCTCATTTGTGACAGAGCCTTaGGCCATGCCCTGTGGACTTCATGGACCTGTAGTT +
Preference number: 3 (lower is better)
Translates to: HVHSIVSFVTEP*AMPCGLHGPVV
Trigger: AACTACAGGTCCATGAAGTCCACAGGGCATGGCCCAAGGCTCTGTCACAAATGAGACTATGCTATGAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR GCA 72 bp AAGAAGTTGGGAAAGCTATTGGGGTCTCCTCAAATCTaGCTCCTAGCCTTTAAGGGACCAGGGAATATCCTA +
Preference number: 3 (lower is better)
Translates to: KKLGKLLGSPQI*LLAFKGPGNIL
Trigger: TAGGATATTCCCTGGTCCCTTAAAGGCTAGGAGGCAGATTTGAGGAGACCCCAATAGCTTTCCCAACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR CCA 72 bp AGTCTCATTTGTGACAGAGCCTTGGGCCATGCCCTGTaGACTTCATGGACCTGTAGTTCTACTTCTAAAGAA +
Preference number: 3 (lower is better)
Translates to: SLICDRALGHAL*TSWTCSSTSKE
Trigger: TTCTTTAGAAGTAGAACTACAGGTCCATGAAGTCCACAGGGCATGGCCCAAGGCTCTGTCACAAATGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS-3UTR TCA 90 bp GAGCCTTGGGCCATGCCCTGTGGACTTCATGGACCTGTAGTTCTACTTCTAAAGCGTGGCACAGGAAGTTaGAAGTGGCACAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: EPWAMPCGLHGPVVLLLKRGTGS*KWHRHW
Trigger: CCAATGCCTGTGCCACTTTCAACTTCCTGTGCCACG...CTTTAGAAGTAGAACTACAGGTCCATGAAGTCCACAGGGCATGGCCCAAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS-3UTR TCA 90 bp GTAGTTCTACTTCTAAAGAAGTTGGGAAAGCTATTGGGGTCTCCTCAAATCTGCCTCCAGGAGGGGGAATaGGGGCAGCTCCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: VVLLLKKLGKLLGSPQICLQEGE*GQLLSL
Trigger: GAGTGACAGGAGCTGCCCTCATTCCCCCTCCTGGAG...GCAGATTTGAGGAGACCCCAATAGCTTTCCCAACTTCTTTAGAAGTAGAACTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS-3UTR TCA 90 bp TGGACCTGTAGTTCTACTTCTAAAGAAGTTGGGAAAGCTATTGGGGTCTCCTCAATGGCCTGTAGTACTTaGGGGTGCAGCCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: WTCSSTSKEVGKAIGVSSMACST*GCSRSV
Trigger: GACTGAGCGGCTGCACCCTCAAGTACTACAGGCCAT...TGAGGAGACCCCAATAGCTTTCCCAACTTCTTTAGAAGTAGAACTACAGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS-3UTR TCA 90 bp GAGGAGTATAAATTATTATCCTGGGTGAGCATGACAAGTGTGGAGAAAGCGTTGATGGCCTGTAGTACTTaGGGGTGCAGCCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: EEYKLLSWVSMTSVEKALMACST*GCSRSV
Trigger: GACTGAGCGGCTGCACCCTCAAGTACTACAGGCCAT...CAACGCTTTCTCCACACTTGTCATGCTCACCCAGGATAATAATTTATACTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074208.6
ENSMUST00000194381.2
CDS-3UTR CCA 90 bp TGGGCCATGCCCTGTGGACTTCATGGACCTGTAGTTCTACTTCTAAAGAAGTTGGTCACTCGACCTTCGTaGCACAGGAAGTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: WAMPCGLHGPVVLLLKKLVTRPS*HRKLKV
Trigger: CACTTTCAACTTCCTGTGCCACGAAGGTCGAGTGAC...CAACTTCTTTAGAAGTAGAACTACAGGTCCATGAAGTCCACAGGGCATGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR CAA 72 bp GGACTTCATGGACCTGTAGTTCTACTTCTAAAGAAGTaGGGAAAGCTATTGGGGTCTCCTCAAATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GLHGPVVLLLKK*GKLLGSPQICL
Trigger: GAGGCAGATTTGAGGAGACCCCAATAGCTTTCCCAACTTCTTTAGAAGTAGAACTACAGGTCCATGAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
3UTR CAA 72 bp CCTGTAGTTCTACTTCTAAAGAAGTTGGGAAAGCTATaGGGGTCTCCTCAAATCTGCCTCCTAGCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: PVVLLLKKLGKL*GSPQICLLAFK
Trigger: CTTAAAGGCTAGGAGGCAGATTTGAGGAGACCCCAATAGCTTTCCCAACTTCTTTAGAAGTAGAACTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS-3UTR TCA 90 bp CTTCATGGACCTGTAGTTCTACTTCTAAAGAAGTTGGGAAAGCTATTGGGGTCTAGAAGCTCTCTTCAGTaGTATCCTGATGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: LHGPVVLLLKKLGKLLGSRSSLQ*YPDEIP
Trigger: TGGGATCTCATCAGGATATCACTGAAGAGAGCTTCT...AGACCCCAATAGCTTTCCCAACTTCTTTAGAAGTAGAACTACAGGTCCATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS CCA 90 bp CATTGGGCGTGTCCTGGACCTCCACAGCAATTCCCCGCTGCCTCATaGCCTGTAGTACTTGAGGGTGCAGCCGCTCAGTCTTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: HWACPGPPQQFPAAS*PVVLEGAAAQSCFQ
Trigger: CTGGAAACAAGACTGAGCGGCTGCACCCTCAAGTACTACAGGCCATGAGGCAGCGGGGAATTGCTGTGGAGGTCCAGGACACGCCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS TCA 90 bp TGGACCTCCACAGCAATTCCCCGCTGCCTCATGGCCTGTAGTACTTaGGGGTGCAGCCGCTCAGTCTTGTTTCCAGTGCCCACCACAACA +
Preference number: 5 (lower is better)
Translates to: WTSTAIPRCLMACST*GCSRSVLFPVPTTT
Trigger: TGTTGTGGTGGGCACTGGAAACAAGACTGAGCGGCTGCACCCTCAAGTACTACAGGCCATGAGGCAGCGGGGAATTGCTGTGGAGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS GCA 90 bp TGTCGATGTACACGGCCTGAGGGAACTCGCTTTGCAGCAGTGAGATaGGAGTCCGCTGGTATAACTCATCGTCCGCCGGAGAAAGCCGGT +
Preference number: 5 (lower is better)
Translates to: CRCTRPEGTRFAAVR*ESAGITHRPPEKAG
Trigger: ACCGGCTTTCTCCGGCGGACGATGAGTTATACCAGCGGACTCGCATCTCACTGCTGCAAAGCGAGTTCCCTCAGGCCGTGTACATCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS CCA 90 bp AGTGATATCCTGATGAGATCCCACGTTCCACTGGACCACCGTCTGTaGGAGCAGCACGCAAGGGCCAAACACGCGATTTCCGCAGATAGT +
Preference number: 5 (lower is better)
Translates to: SDILMRSHVPLDHRL*EQHARAKHAISADS
Trigger: ACTATCTGCGGAAATCGCGTGTTTGGCCCTTGCGTGCTGCTCCCACAGACGGTGGTCCAGTGGAACGTGGGATCTCATCAGGATATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS-3UTR CAA 90 bp CATGGACCTGTAGTTCTACTTCTAAAGAAGTTGGGAAAGCTATTGGGGTCTCCTTCGTGGCACAGGAAGTaGAAAGTGGCACAGGCATTG +
Preference number: 5 (lower is better)
Translates to: HGPVVLLLKKLGKLLGSPSWHRK*KVAQAL
Trigger: CAATGCCTGTGCCACTTTCAACTTCCTGTGCCACGA...AGGAGACCCCAATAGCTTTCCCAACTTCTTTAGAAGTAGAACTACAGGTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS CCA 72 bp CTGATGAGATCCCACGTTCCACTGGACCACCGTCTGTaGGAGCAGCACGCAAGGGCCAAACACGCGATTTCC +
Preference number: 6 (lower is better)
Translates to: LMRSHVPLDHRL*EQHARAKHAIS
Trigger: GGAAATCGCGTGTTTGGCCCTTGCGTGCTGCTCCCACAGACGGTGGTCCAGTGGAACGTGGGATCTCATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS CCA 72 bp TGTCCTGGACCTCCACAGCAATTCCCCGCTGCCTCATaGCCTGTAGTACTTGAGGGTGCAGCCGCTCAGTCT +
Preference number: 6 (lower is better)
Translates to: CPGPPQQFPAAS*PVVLEGAAAQS
Trigger: AGACTGAGCGGCTGCACCCTCAAGTACTACAGGCCATGAGGCAGCGGGGAATTGCTGTGGAGGTCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS TCA 72 bp ACAGCAATTCCCCGCTGCCTCATGGCCTGTAGTACTTaGGGGTGCAGCCGCTCAGTCTTGTTTCCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: TAIPRCLMACST*GCSRSVLFPVP
Trigger: GGGCACTGGAAACAAGACTGAGCGGCTGCACCCTCAAGTACTACAGGCCATGAGGCAGCGGGGAATTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS CCA 72 bp GGGAACTCGCTTTGCAGCAGTGAGATGCGAGTCCGCTaGTATAACTCATCGTCCGCCGGAGAAAGCCGGTGT +
Preference number: 6 (lower is better)
Translates to: GNSLCSSEMRVR*YNSSSAGESRC
Trigger: ACACCGGCTTTCTCCGGCGGACGATGAGTTATACCAGCGGACTCGCATCTCACTGCTGCAAAGCGAGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6
CDS GCA 72 bp GTACTTGAGGGTGCAGCCGCTCAGTCTTGTTTCCAGTaGCCACCACAACAATCTGTTCCACTGGACCACCGT +
Preference number: 6 (lower is better)
Translates to: VLEGAAAQSCFQ*PPQQSVPLDHR
Trigger: ACGGTGGTCCAGTGGAACAGATTGTTGTGGTGGGCACTGGAAACAAGACTGAGCGGCTGCACCCTCAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194381.2
CDS TCA 72 bp GTTCCAGCATCCAGAAAAGGGAGAAGCTCTCTTCAGTaGTATCCTGATGAGATCCCACGTTCCACTGGACCA +
Preference number: 6 (lower is better)
Translates to: VPASRKGRSSLQ*YPDEIPRSTGP
Trigger: TGGTCCAGTGGAACGTGGGATCTCATCAGGATATCACTGAAGAGAGCTTCTCCCTTTTCTGGATGCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074208.6