Pregenerated sensors for NDST4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027971Ensembl transcript IDs: ENSMUST00000144344.3, ENSMUST00000173932.8, ENSMUST00000174648.6, ENSMUST00000198101.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAAACAGTATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTaGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGCAACAACAG | + |
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Preference number: 1 (lower is better) Translates to: TNSITPVAVPAAGFI*RKRWSWSLMLGQQQ Trigger: CTGTTGTTGCCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATACTGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR TCA 90 bp | GGGATGAGGGTTCCGACTTTGAAAACCCATTCCCGGGTTTACATTTaGTGCTTGGCATCCAGGGATTGTGTATGCAATCATGAAGACAAG | + |
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Preference number: 1 (lower is better) Translates to: GMRVPTLKTHSRVYI*CLASRDCVCNHEDK Trigger: CTTGTCTTCATGATTGCATACACAATCCCTGGATGCCAAGCATCAAATGTAAACCCGGGAATGGGTTTTCAAAGTCGGAACCCTCATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR GCA 90 bp | CATGCCATAGCGATGAAGTGGGATGCTGGACCAATGGATAAATGGTaGTTAGAAACATTAGCCCTTCATTCAGACGCTGGGTTAAACCTG | + |
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Preference number: 1 (lower is better) Translates to: HAIAMKWDAGPMDKW*LETLALHSDAGLNL Trigger: CAGGTTTAACCCAGCGTCTGAATGAAGGGCTAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCACTTCATCGCTATGGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR TCA 90 bp | GGTTTACATTTGATGCTTGGCATCCAGGGATTGTGTATGCAATCATaGAGACAAGGGAGTTATCAACCCGCACTTAAAGGCCAGCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: GLHLMLGIQGLCMQS*RQGSYQPALKGQLS Trigger: TGAAAGCTGGCCTTTAAGTGCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATGCCAAGCATCAAATGTAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR CCA 90 bp | ACTCAGGAGGAGGGAGATATGTGGGTAATGTTCCCAAAGTCACCTTaGTTGACTGTTATAGTAAATTTACCTTCATGTATCACTCAAAAG | + |
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Preference number: 1 (lower is better) Translates to: TQEEGDMWVMFPKSP*LTVIVNLPSCITQK Trigger: CTTTTGAGTGATACATGAAGGTAAATTTACTATAACAGTCAACCAAGGTGACTTTGGGAACATTACCCACATATCTCCCTCCTCCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR GCA 90 bp | ACCATTAACAAAGTGAAAGTAGTTGACAGGTATATTTGTAAGTCCTaGAAGGCTCCAAAAGTCTGGAAAAGAATGAAACAACCATGCCAG | + |
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Preference number: 1 (lower is better) Translates to: TINKVKVVDRYICKS*KAPKVWKRMKQPCQ Trigger: CTGGCATGGTTGTTTCATTCTTTTCCAGACTTTTGGAGCCTTGCAGGACTTACAAATATACCTGTCAACTACTTTCACTTTGTTAATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR TCA 90 bp | AAGGCAGGCTGCGCTAGTTATATAACAGAACTAGGAGGGGAATGGTaGATAAATAGTAGTGGTCTAAATAAATCATCATGGTTATTTTTC | + |
|
Preference number: 1 (lower is better) Translates to: KAGCASYITELGGEW*INSSGLNKSSWLFF Trigger: GAAAAATAACCATGATGATTTATTTAGACCACTACTATTTATTCACCATTCCCCTCCTAGTTCTGTTATATAACTAGCGCAGCCTGCCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR TCA 90 bp | TATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCGGCCCATGTTATTTTTaGGTCCCTCCCCCTTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: YHSSGCTSSRVYLEEEMVGPCYF*VPPPFS Trigger: TGAGAAAGGGGGAGGGACTCAAAAATAACATGGGCC...GACCATCTCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGGCATTAGTGAAGTGGTaGCCTGAAATCTGGATGACA | + |
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Preference number: 2 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGALVKW*PEIWMT Trigger: TGTCATCCAGATTTCAGGTCACCACTTCACTAATGC...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCAGACAGTCTGCTTTATaGAGTCAGCTGGCCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: WHPGIVYAIMKTRELSTRRQSAL*SQLAHV Trigger: AACATGGGCCAGCTGACTTCATAAAGCAGACTGTCT...GCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | CATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCACTCAGGGGAGAGCATTTTaGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HPGIVYAIMKTRELSTRTQGRAF*CVCVCV Trigger: CACACACACACACACACACCAAAATGCTCTCCCCTG...AGTGCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGTACTGCTGTTCTGCATAGTGAAGTGGTGACCTaGAATCTGGATGACAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVCETSTAVLHSEVVT*NLDDRG Trigger: TCCTCTGTCATCCAGATTTCAGGTCACCACTTCACT...ATGCAGAACAGCAGTACTAGTTTCACACACACACACACACACACACACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGCTGAGACAACATTCCTaGAGTGGGAAGAAATCTTTA | + |
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Preference number: 2 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGLRQHS*SGKKSL Trigger: TAAAGATTTCTTCCCACTTCAGGAATGTTGTCTCAG...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR GCA 90 bp | CATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCACTACAGGGTTTTCTCTCTaGCTATCTGGGGTATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: HPGIVYAIMKTRELSTRTTGFSL*LSGVSH Trigger: GTGAGATACCCCAGATAGGCAGAGAGAAAACCCTGT...AGTGCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGTATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAGAGGAGGGAGATATGTaGGTAATGTTCCCAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: QTVSLQWLYQQQGLFGGREEGDM*VMFPKS Trigger: TGACTTTGGGAACATTACCCACATATCTCCCTCCTC...TCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATACTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCCTAGGAGGGGAATGGTaGATAAATAGTAGTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: WHPGIVYAIMKTRELSTRLGGEW*INSSGL Trigger: TAGACCACTACTATTTATTCACCATTCCCCTCCTAG...GCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR GCA 90 bp | GACAGTCTGCTTTATGAAGTCAGCTGGCCCATGTTATTTTTGAGTCCCTCCCCCACAGAGAAGGCTCAATaGCTGTTTAGATCTGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: DSLLYEVSWPMLFLSPSPTEKAQ*LFRSAN Trigger: ATTTGCAGATCTAAACAGGCATTGAGCCTTCTCTGT...GGGGGAGGGACTCAAAAATAACATGGGCCAGCTGACTTCATAAAGCAGACTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGGTTGGGTTGACAGTTTaGTTTCAGATATTGTTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGVGLTV*FQILLG Trigger: ACCTAACAATATCTGAAAGCAAACTGTCAACCCAAC...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGAAGGCTCCAAAAGTCTaGAAAAGAATGAAACAACCA | + |
|
Preference number: 2 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGKAPKV*KRMKQP Trigger: TGGTTGTTTCATTCTTTTCCAGACTTTTGGAGCCTT...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCTTAGACCTCTGTGTGTaGCAGGGGAGAGCATTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLLDLCV*QGRAFW Trigger: CCAAAATGCTCTCCCCTGCCACACACAGAGGTCTAA...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR CAA 90 bp | TCACAGTCCTCTCCTGATAATCACACGCGTATGAAAAGGATAGAGTaGCTTGGTTTGCCTTTTCTACTTAATGGTGACTCGGTGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: SQSSPDNHTRMKRIE*LGLPFLLNGDSVPC Trigger: ACATGGCACCGAGTCACCATTAAGTAGAAAAGGCAAACCAAGCAACTCTATCCTTTTCATACGCGTGTGATTATCAGGAGAGGACTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR GCA 90 bp | TATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCAGAATGAAACAACCATaGCAGTGTGCTAAAGGATAT | + |
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Preference number: 2 (lower is better) Translates to: YHSSGCTSSRVYLEEEMVRMKQP*QCAKGY Trigger: ATATCCTTTAGCACACTGGCATGGTTGTTTCATTCT...GACCATCTCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGTATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAGGACCAATGGATAAATaGTGCTTAGAAACATTAGCC | + |
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Preference number: 2 (lower is better) Translates to: QTVSLQWLYQQQGLFGGRGPMDK*CLETLA Trigger: GGCTAATGTTTCTAAGCACCATTTATCCATTGGTCC...TCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATACTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGATGCTTGCAAATAGATaGACATATGTCTTACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGMLANR*TYVLQR Trigger: TCTCTGTAAGACATATGTCCATCTATTTGCAAGCAT...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR TCA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCGCATTAGTGAAGTGGTaGCCTGAAATCTGGATGACA | + |
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Preference number: 2 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLALVKW*PEIWMT Trigger: TGTCATCCAGATTTCAGGTCACCACTTCACTAATGC...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGTACTGCTGTTCTGCATACAGAGAAGGCTCAATaGCTGTTTAGATCTGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVCETSTAVLHTEKAQ*LFRSAN Trigger: ATTTGCAGATCTAAACAGGCATTGAGCCTTCTCTGT...ATGCAGAACAGCAGTACTAGTTTCACACACACACACACACACACACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | CATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCACTCCTTCATTCAGACGCTaGGTTAAACCTGAATTCATT | + |
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Preference number: 2 (lower is better) Translates to: HPGIVYAIMKTRELSTRTPSFRR*VKPEFI Trigger: AATGAATTCAGGTTTAACCCAGCGTCTGAATGAAGG...AGTGCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTCATTCAGACGCTGGGTTAAACCTGAATTCATTTTTAGACTCTTATCTTAGTGAAGTGGTGACCTaGAATCTGGATGACAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: ALHSDAGLNLNSFLDSYLSEVVT*NLDDRG Trigger: TCCTCTGTCATCCAGATTTCAGGTCACCACTTCACT...AAGATAAGAGTCTAAAAATGAATTCAGGTTTAACCCAGCGTCTGAATGAAGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGTACTGCTGTTCTGCATCCAATGGATAAATGGTaGTTAGAAACATTAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVCETSTAVLHPMDKW*LETLAL Trigger: AAGGGCTAATGTTTCTAAGCACCATTTATCCATTGG...ATGCAGAACAGCAGTACTAGTTTCACACACACACACACACACACACACACACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCGAGGAGGGAGATATGTaGGTAATGTTCCCAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LTVHFSQYRVFSLPIWGIEEGDM*VMFPKS Trigger: TGACTTTGGGAACATTACCCACATATCTCCCTCCTC...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | CATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCACTAAGGCTCCAAAAGTCTaGAAAAGAATGAAACAACCA | + |
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Preference number: 2 (lower is better) Translates to: HPGIVYAIMKTRELSTRTKAPKV*KRMKQP Trigger: TGGTTGTTTCATTCTTTTCCAGACTTTTGGAGCCTT...AGTGCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCCCTTCATTCAGACGCTaGGTTAAACCTGAATTCATT | + |
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Preference number: 2 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLPSFRR*VKPEFI Trigger: AATGAATTCAGGTTTAACCCAGCGTCTGAATGAAGG...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR GCA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCCCAATGGATAAATGGTaGTTAGAAACATTAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLPMDKW*LETLAL Trigger: AAGGGCTAATGTTTCTAAGCACCATTTATCCATTGG...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCGGACCAATGGATAAATaGTGCTTAGAAACATTAGCC | + |
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Preference number: 2 (lower is better) Translates to: LTVHFSQYRVFSLPIWGIGPMDK*CLETLA Trigger: GGCTAATGTTTCTAAGCACCATTTATCCATTGGTCC...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAAATATTAAAGGTGAGTTTTCCCAATTACTACAGTGCAGAATCTCAGAGCTCCAGAGACCATGTTaGAGTTTTCTGAGGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: KENIKGEFSQLLQCRISELQRPC*SFLRMA Trigger: TGCCATCCTCAGAAAACTCCAACATGGTCTCTGGAG...CTCTGAGATTCTGCACTGTAGTAATTGGGAAAACTCACCTTTAATATTTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAAATATTAAAGGTGAGTTTTCCCAATTACTACAGTGCAGAATCTCAGAGAATTTCCCAATTTCCTaGGGCTCTCCAGAGACCATG | + |
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Preference number: 2 (lower is better) Translates to: KENIKGEFSQLLQCRISENFPIS*GSPETM Trigger: CATGGTCTCTGGAGAGCCCCAGGAAATTGGGAAATT...CTCTGAGATTCTGCACTGTAGTAATTGGGAAAACTCACCTTTAATATTTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | AATTACTCAGGAGGAGGGAGATATGTGGGTAATGTTCCCAAAGTCACCTTGGTTATGCTTGCAAATAGATaGACATATGTCTTACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NYSGGGRYVGNVPKVTLVMLANR*TYVLQR Trigger: TCTCTGTAAGACATATGTCCATCTATTTGCAAGCAT...AACCAAGGTGACTTTGGGAACATTACCCACATATCTCCCTCCTCCTGAGTAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR CAA 90 bp | CAGGAGGAGGGAGATATGTGGGTAATGTTCCCAAAGTCACCTTGGTaGACTGTTATAGTAAATTTACCTTCATGTATCACTCAAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: QEEGDMWVMFPKSPW*TVIVNLPSCITQKI Trigger: TATCTTTTGAGTGATACATGAAGGTAAATTTACTATAACAGTCAACCAAGGTGACTTTGGGAACATTACCCACATATCTCCCTCCTCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR CAA 90 bp | TACTCAGGAGGAGGGAGATATGTGGGTAATGTTCCCAAAGTCACCTaGGTTGACTGTTATAGTAAATTTACCTTCATGTATCACTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: YSGGGRYVGNVPKVT*VDCYSKFTFMYHSK Trigger: TTTTGAGTGATACATGAAGGTAAATTTACTATAACAGTCAACCAAGGTGACTTTGGGAACATTACCCACATATCTCCCTCCTCCTGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CCA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTTCCCAAAGTCACCTTaGTTGACTGTTATAGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: LTVHFSQYRVFSLPIWGIFPKSP*LTVIVN Trigger: ATTTACTATAACAGTCAACCAAGGTGACTTTGGGAA...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CAA 90 bp | CATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCACTAGGAGGATTGCACACTaGAAGGCAGGCTGCGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: HPGIVYAIMKTRELSTRTRRIAH*KAGCAS Trigger: ACTAGCGCAGCCTGCCTTCAAGTGTGCAATCCTCCT...AGTGCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR CCA 72 bp | GCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAGATaGTCATGGTCCCTTATGCTTGGGCAACAACAGCTT | + |
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Preference number: 3 (lower is better) Translates to: AVPAAGFIWRKR*SWSLMLGQQQL Trigger: AAGCTGTTGTTGCCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGGTACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| 3UTR-3UTR CAA 90 bp | TGGCATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCTCTCCAGAGACCATGTaGGAGTTTTCTGAGGATGGC | + |
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Preference number: 3 (lower is better) Translates to: WHPGIVYAIMKTRELSTRSPETM*EFSEDG Trigger: GCCATCCTCAGAAAACTCCAACATGGTCTCTGGAGA...GCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR GCA 72 bp | GCGATGAAGTGGGATGCTGGACCAATGGATAAATGGTaGTTAGAAACATTAGCCCTTCATTCAGACGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AMKWDAGPMDKW*LETLALHSDAG Trigger: CCCAGCGTCTGAATGAAGGGCTAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCACTTCATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR CCA 72 bp | ACTACTAGGCTAGACAGTCTGCTTTATGAAGTCAGCTaGCCCATGTTATTTTTGAGTCCCTCCCCCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TTRLDSLLYEVS*PMLFLSPSPFL Trigger: GAGAAAGGGGGAGGGACTCAAAAATAACATGGGCCAGCTGACTTCATAAAGCAGACTGTCTAGCCTAGTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR TCA 72 bp | TTGATGCTTGGCATCCAGGGATTGTGTATGCAATCATaGAGACAAGGGAGTTATCAACCCGCACTTAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LMLGIQGLCMQS*RQGSYQPALKG Trigger: GCCTTTAAGTGCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATGCCAAGCATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR CCA 72 bp | GGTACTACAGTTCAGAATCACAATTTCCCAATTTCCTaGGGCTCTCCAGAGACCATGTTGGAGTTTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTTVQNHNFPIS*GSPETMLEFSE Trigger: CTCAGAAAACTCCAACATGGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACTGTAGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR-3UTR CAA 90 bp | TATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCGTTTGCTTTCAGATATaGTTAGGTAGGTCACTGATA | + |
|
Preference number: 3 (lower is better) Translates to: YHSSGCTSSRVYLEEEMVVCFQI*LGRSLI Trigger: TATCAGTGACCTACCTAACAATATCTGAAAGCAAAC...GACCATCTCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR TCA 72 bp | GGTAATTTGCATACAGTCAGAGCATTAGTGAAGTGGTaGCCTGAAATCTGGATGACAGAGGAAGTGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GNLHTVRALVKW*PEIWMTEEVSC Trigger: ACAGCTCACTTCCTCTGTCATCCAGATTTCAGGTCACCACTTCACTAATGCTCTGACTGTATGCAAATTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR TCA 72 bp | GTTCCGACTTTGAAAACCCATTCCCGGGTTTACATTTaGTGCTTGGCATCCAGGGATTGTGTATGCAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: VPTLKTHSRVYI*CLASRDCVCNH Trigger: ATGATTGCATACACAATCCCTGGATGCCAAGCATCAAATGTAAACCCGGGAATGGGTTTTCAAAGTCGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR CCA 72 bp | GCCTCTAGAAAAATTACTCAGGAGGAGGGAGATATGTaGGTAATGTTCCCAAAGTCACCTTGGTTGACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASRKITQEEGDM*VMFPKSPWLTV Trigger: AACAGTCAACCAAGGTGACTTTGGGAACATTACCCACATATCTCCCTCCTCCTGAGTAATTTTTCTAGAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAACAGTATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAATAGAGTTGCTTGGTTaGCCTTTTCTACTTAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: QTVSLQWLYQQQGLFGGRIELLG*PFLLNG Trigger: ACCATTAAGTAGAAAAGGCAAACCAAGCAACTCTAT...TCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATACTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAAATATTAAAGGTGAGTTTTCCCAATTACTACAGTGCAGAATCTCAGAGAGGAGGATTGCACACTaGAAGGCAGGCTGCGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: KENIKGEFSQLLQCRISERRIAH*KAGCAS Trigger: ACTAGCGCAGCCTGCCTTCAAGTGTGCAATCCTCCT...CTCTGAGATTCTGCACTGTAGTAATTGGGAAAACTCACCTTTAATATTTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR CCA 72 bp | AATTTAGATATAGAGAAACTATTAGACCTCTGTGTGTaGCAGGGGAGAGCATTTTGGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: NLDIEKLLDLCV*QGRAFWCVCVC Trigger: ACACACACACACACACCAAAATGCTCTCCCCTGCCACACACAGAGGTCTAATAGTTTCTCTATATCTAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR-3UTR CAA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCATAGAGTTGCTTGGTTaGCCTTTTCTACTTAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLIELLG*PFLLNG Trigger: ACCATTAAGTAGAAAAGGCAAACCAAGCAACTCTAT...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR TCA 72 bp | ATTCTCACATCTACCACCATTAAACCTCTCATTTGTTaGAAAAACCAGCGGTCTCCATCTGACATTTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILTSTTIKPLIC*KNQRSPSDIFG Trigger: GCCAAAAATGTCAGATGGAGACCGCTGGTTTTTTCAACAAATGAGAGGTTTAATGGTGGTAGATGTGAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| 3UTR CCA 72 bp | GAGGGAGATATGTGGGTAATGTTCCCAAAGTCACCTTaGTTGACTGTTATAGTAAATTTACCTTCATGTATC | + |
|
Preference number: 3 (lower is better) Translates to: EGDMWVMFPKSP*LTVIVNLPSCI Trigger: GATACATGAAGGTAAATTTACTATAACAGTCAACCAAGGTGACTTTGGGAACATTACCCACATATCTCCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR CCA 72 bp | ATGGTGCTTAGAAACATTAGCCCTTCATTCAGACGCTaGGTTAAACCTGAATTCATTTTTAGACTCTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: MVLRNISPSFRR*VKPEFIFRLLS Trigger: AGATAAGAGTCTAAAAATGAATTCAGGTTTAACCCAGCGTCTGAATGAAGGGCTAATGTTTCTAAGCACCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR TCA 72 bp | TGCGCTAGTTATATAACAGAACTAGGAGGGGAATGGTaGATAAATAGTAGTGGTCTAAATAAATCATCATGG | + |
|
Preference number: 3 (lower is better) Translates to: CASYITELGGEW*INSSGLNKSSW Trigger: CCATGATGATTTATTTAGACCACTACTATTTATTCACCATTCCCCTCCTAGTTCTGTTATATAACTAGCGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR GCA 72 bp | AAAGTGAAAGTAGTTGACAGGTATATTTGTAAGTCCTaGAAGGCTCCAAAAGTCTGGAAAAGAATGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: KVKVVDRYICKS*KAPKVWKRMKQ Trigger: TTGTTTCATTCTTTTCCAGACTTTTGGAGCCTTGCAGGACTTACAAATATACCTGTCAACTACTTTCACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| 3UTR CCA 72 bp | TTCTTCACCATGCACATACAGGATTTATTCCAAGGATaGAAGGATAATGCAGAATATGAAAATCATGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: FFTMHIQDLFQG*KDNAEYENHVM Trigger: CATTACATGATTTTCATATTCTGCATTATCCTTCCATCCTTGGAATAAATCCTGTATGTGCATGGTGAAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144344.3 |
||
| CDS-3UTR TCA 90 bp | TATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCGCAGCTGGATCTTCATaGGATCGTTGGTGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YHSSGCTSSRVYLEEEMVAAGSS*DRWCWY Trigger: GTACCAGCACCAACGATCTCATGAAGATCCAGCTGC...GACCATCTCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR GCA 90 bp | AATTACTCAGGAGGAGGGAGATATGTGGGTAATGTTCCCAAAGTCACCTTGGTTGTGATGTGGGGCCACTaGGTAGCCCAGGTTGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: NYSGGGRYVGNVPKVTLVVMWGH*VAQVDR Trigger: CCGATCAACCTGGGCTACGCAGTGGCCCCACATCAC...AACCAAGGTGACTTTGGGAACATTACCCACATATCTCCCTCCTCCTGAGTAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGCTGGTACCAAGAATATaGCCTGTCCGAGGGGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGLVPRI*PVRGVY Trigger: ATAGACCCCTCGGACAGGGCATATTCTTGGTACCAG...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGTCTTTCTATGTGCACTaGATACCACCCAGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGSFYVH*IPPRHQ Trigger: CTGGTGCCTGGGTGGTATGCAGTGCACATAGAAAGA...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | GGTACTACAGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCGAGATGCAGCCCTCTTaGGAGCCTCTTCTGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTTVQNHNFPISWGSPETEMQPS*EPLLSG Trigger: TCCACTCAGAAGAGGCTCCCAAGAGGGCTGCATCTC...GGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACTGTAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR TCA 90 bp | ATAGCGATGAAGTGGGATGCTGGACCAATGGATAAATGGTGCTTAGAAACATTAGACTGGGTAGACCCCTaGGTGATGTGGGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IAMKWDAGPMDKWCLETLDWVDP*VMWGHC Trigger: GCAGTGGCCCCACATCACTCAGGGGTCTACCCAGTC...TAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCACTTCATCGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGTGAGCTGTATGGTGATCCCCAGACTAGACACAAGATATTGCCGCAAACCCTTGGGAGCCTCTTCTaGGTGGAAGTAGTTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GSELYGDPQTRHKILPQTLGSLF*VEVVST Trigger: AGTGCTAACTACTTCCACTCAGAAGAGGCTCCCAAG...GGTTTGCGGCAATATCTTGTGTCTAGTCTGGGGATCACCATACAGCTCACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR GCA 90 bp | GACAGTCTGCTTTATGAAGTCAGCTGGCCCATGTTATTTTTGAGTCCCTCCCCCAGCCATCTTTCTATGTaGACTGCATACCACCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSLLYEVSWPMLFLSPSPSHLSM*TAYHPG Trigger: GCCTGGGTGGTATGCAGTGCACATAGAAAGATGGCT...GGGGGAGGGACTCAAAAATAACATGGGCCAGCTGACTTCATAAAGCAGACTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | TGGCATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCAGCTCGAAGTATTTGTaGGCCAGTTGCACTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WHPGIVYAIMKTRELSTRSSKYL*ASCTGG Trigger: GCCTCCAGTGCAACTGGCCCACAAATACTTCGAGCT...GCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR TCA 90 bp | GGTACTACAGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCCTTGGGAGCCTCTTCTaGGTGGAAGTAGTTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GTTVQNHNFPISWGSPETLGSLF*VEVVST Trigger: AGTGCTAACTACTTCCACTCAGAAGAGGCTCCCAAG...GGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACTGTAGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | TGGCATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCTGGACTCTGAATCCATaGGCGGGTATTTTCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WHPGIVYAIMKTRELSTRWTLNP*AGIFGL Trigger: AAGGCCGAAAATACCCGCCCATGGATTCAGAGTCCA...GCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGTACTGCTGTTCTGCATCTGGTACCAAGAATATaGCCTGTCCGAGGGGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCETSTAVLHLVPRI*PVRGVY Trigger: ATAGACCCCTCGGACAGGGCATATTCTTGGTACCAG...ATGCAGAACAGCAGTACTAGTTTCACACACACACACACACACACACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCATGTTGGATCTTTCTATGTGCACTaGATACCACCCAGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSESQFPNFLGLSRDHVGSFYVH*IPPRHQ Trigger: CTGGTGCCTGGGTGGTATGCAGTGCACATAGAAAGA...TCCAACATGGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCATGTTGGAAGCCATCTTTCTATGTaGACTGCATACCACCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSESQFPNFLGLSRDHVGSHLSM*TAYHPG Trigger: GCCTGGGTGGTATGCAGTGCACATAGAAAGATGGCT...TCCAACATGGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | CCCACTAAAGATGGCCCTCACTTTCTAGGGTACTACAGTTCAGAATCACAATTTGAGATGCAGCCCTCTTaGGAGCCTCTTCTGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTKDGPHFLGYYSSESQFEMQPS*EPLLSG Trigger: TCCACTCAGAAGAGGCTCCCAAGAGGGCTGCATCTC...AAATTGTGATTCTGAACTGTAGTACCCTAGAAAGTGAGGGCCATCTTTAGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAATCCATCACAGTAGCTaGGTCAGATCTCAGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTVSLQWLYQQQGLFGGRIHHSS*VRSQLL Trigger: CAACAGCTGAGATCTGACCCAGCTACTGTGATGGAT...TCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATACTGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGTACTGCTGTTCTGCATTGGACTCTGAATCCATaGGCGGGTATTTTCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCETSTAVLHWTLNP*AGIFGL Trigger: AAGGCCGAAAATACCCGCCCATGGATTCAGAGTCCA...ATGCAGAACAGCAGTACTAGTTTCACACACACACACACACACACACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCGGGCCTTTGGTAATATaGAGCAGAGGAGACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLGPLVI*SRGDWG Trigger: CCCCCAGTCTCCTCTGCTCCATATTACCAAAGGCCC...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGGGGCAAATTCTTTGTTaGGAATCATCTGTTCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGGQILC*ESSVPL Trigger: TAGTGGAACAGATGATTCTCAACAAAGAATTTGCCC...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR TCA 90 bp | CCCACTAAAGATGGCCCTCACTTTCTAGGGTACTACAGTTCAGAATCACAATTTGCAGCTGGATCTTCATaGGATCGTTGGTGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PTKDGPHFLGYYSSESQFAAGSS*DRWCWY Trigger: GTACCAGCACCAACGATCTCATGAAGATCCAGCTGC...AAATTGTGATTCTGAACTGTAGTACCCTAGAAAGTGAGGGCCATCTTTAGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR TCA 90 bp | GGTACTACAGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCATGCCTTCACATCTTTaGCATTCATTCTCGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTTVQNHNFPISWGSPETMPSHL*HSFSCP Trigger: AGGGCACGAGAATGAATGTCAAAGATGTGAAGGCAT...GGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACTGTAGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR GCA 90 bp | CCCACTAAAGATGGCCCTCACTTTCTAGGGTACTACAGTTCAGAATCACAATTTTCGTCGCATGGATTCTaGCAGAGAGGGTCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTKDGPHFLGYYSSESQFSSHGF*QRGSFC Trigger: GCAGAAAGACCCTCTCTGGCAGAATCCATGCGACGA...AAATTGTGATTCTGAACTGTAGTACCCTAGAAAGTGAGGGCCATCTTTAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | GGTACTACAGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCTCTGCAGTTTCAAGTTaGTCCAGCTGTGCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTTVQNHNFPISWGSPETSAVSS*SSCAQS Trigger: ACTTTGTGCACAGCTGGACCAACTTGAAACTGCAGA...GGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACTGTAGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCGGTCGCGGTAGTAGCTaGAGAGGAAAGTTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLGRGSS*RGKFWT Trigger: AGTCCAGAACTTTCCTCTCCAGCTACTACCGCGACC...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR GCA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCGTCGCATGGATTCTaGCAGAGAGGGTCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTVHFSQYRVFSLPIWGISSHGF*QRGSFC Trigger: GCAGAAAGACCCTCTCTGGCAGAATCCATGCGACGA...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCATGTTGGATCTGCAGTTTCAAGTTaGTCCAGCTGTGCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSESQFPNFLGLSRDHVGSAVSS*SSCAQS Trigger: ACTTTGTGCACAGCTGGACCAACTTGAAACTGCAGA...TCCAACATGGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | ATAGCGATGAAGTGGGATGCTGGACCAATGGATAAATGGTGCTTAGAAACATTAAGCTCGAAGTATTTGTaGGCCAGTTGCACTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IAMKWDAGPMDKWCLETLSSKYL*ASCTGG Trigger: GCCTCCAGTGCAACTGGCCCACAAATACTTCGAGCT...TAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCACTTCATCGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | GGTACTACAGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCAGGAATTTCGGTAAATaGTCACAGGTTTTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTTVQNHNFPISWGSPETRNFGK*SQVFSL Trigger: CAGGGAGAAAACCTGTGACCATTTACCGAAATTCCT...GGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACTGTAGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | GGTACTACAGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCCAAAGAGAAGGACAGTaGGGTCAGTTTTGGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GTTVQNHNFPISWGSPETQREGQ*GQFWMY Trigger: ATACATCCAAAACTGACCCCACTGTCCTTCTCTTTG...GGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACTGTAGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGTACTGCTGTTCTGCATACCATGATGCTATTATaGATGAAGCCCTTCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCETSTAVLHTMMLL*MKPFLY Trigger: GTACAGGAAGGGCTTCATTCATAATAGCATCATGGT...ATGCAGAACAGCAGTACTAGTTTCACACACACACACACACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGAGCTGTATGGTGATCCCCAGACTAGACACAAGATATTGCCGCAAACCACCAGACATCTCCTCTaGAATGTTTTTAAATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSELYGDPQTRHKILPQTTRHLL*NVFKSG Trigger: TCCTGATTTAAAAACATTGCAGAGGAGATGTCTGGT...GGTTTGCGGCAATATCTTGTGTCTAGTCTGGGGATCACCATACAGCTCACTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTGGAGAGGAAAGTTCTaGACTCTGAATCCATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LTVHFSQYRVFSLPIWGIWRGKF*TLNPWA Trigger: CGCCCATGGATTCAGAGTCCAGAACTTTCCTCTCCA...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS-3UTR CCA 90 bp | ATAGCGATGAAGTGGGATGCTGGACCAATGGATAAATGGTGCTTAGAAACATTATGGAGAGGAAAGTTCTaGACTCTGAATCCATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IAMKWDAGPMDKWCLETLWRGKF*TLNPWA Trigger: CGCCCATGGATTCAGAGTCCAGAACTTTCCTCTCCA...TAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCACTTCATCGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CCA 90 bp | TATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCGTAGAATGGTTATACTaGAAAATTGTCCAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YHSSGCTSSRVYLEEEMVVEWLY*KIVQSS Trigger: GGAAGACTGGACAATTTTCCAGTATAACCATTCTAC...GACCATCTCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR TCA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCGGAAGTAGGCAGAAATaGGGATGCTCACCAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTVHFSQYRVFSLPIWGIGSRQK*GCSPSK Trigger: TTTGCTTGGTGAGCATCCTCATTTCTGCCTACTTCC...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTATCACTCCAGTGGCTGTACCAGCAGCAGGGTTTATTTGGAGGAAGAACCAGACATCTCCTCTaGAATGTTTTTAAATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTVSLQWLYQQQGLFGGRTRHLL*NVFKSG Trigger: TCCTGATTTAAAAACATTGCAGAGGAGATGTCTGGT...TCTTCCTCCAAATAAACCCTGCTGCTGGTACAGCCACTGGAGTGATACTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR GCA 90 bp | TGGGATGCTGGACCAATGGATAAATGGTGCTTAGAAACATTAGCCCTTCATTCAGATGTCAGCACACTCTaGTTCTGCAGTCGTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WDAGPMDKWCLETLALHSDVSTL*FCSRFN Trigger: ATTGAAACGACTGCAGAAGCAGAGTGTGCTGACATC...TGAATGAAGGGCTAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| 3UTR CAA 72 bp | AATCACACGCGTATGAAAAGGATAGAGTTGCTTGGTTaGCCTTTTCTACTTAATGGTGACTCGGTGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NHTRMKRIELLG*PFLLNGDSVPC Trigger: ACATGGCACCGAGTCACCATTAAGTAGAAAAGGCAAACCAAGCAACTCTATCCTTTTCATACGCGTGTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR TCA 90 bp | CCCACTAAAGATGGCCCTCACTTTCTAGGGTACTACAGTTCAGAATCACAATTTGTGGTAAAACTTCCCTaGAAATCCAAGGTTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTKDGPHFLGYYSSESQFVVKLP*KSKVEG Trigger: ACCTTCAACCTTGGATTTTCAGGGAAGTTTTACCAC...AAATTGTGATTCTGAACTGTAGTACCCTAGAAAGTGAGGGCCATCTTTAGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR TCA 90 bp | TGGGATGCTGGACCAATGGATAAATGGTGCTTAGAAACATTAGCCCTTCATTCAGTGCGCAGTAAATTTTaGGTCTCTAGTAATGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WDAGPMDKWCLETLALHSVRSKF*VSSNAF Trigger: GAAGGCATTACTAGAGACTCAAAATTTACTGCGCAC...TGAATGAAGGGCTAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR GCA 90 bp | CCCACTAAAGATGGCCCTCACTTTCTAGGGTACTACAGTTCAGAATCACAATTTAGCACACTCTGCTTCTaGAGTCGTTTCAATAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTKDGPHFLGYYSSESQFSTLCF*SRFNKC Trigger: ACACTTATTGAAACGACTGCAGAAGCAGAGTGTGCT...AAATTGTGATTCTGAACTGTAGTACCCTAGAAAGTGAGGGCCATCTTTAGTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAAATATTAAAGGTGAGTTTTCCCAATTACTACAGTGCAGAATCTCAGAGATCCATCACAGTAGCTaGGTCAGATCTCAGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KENIKGEFSQLLQCRISEIHHSS*VRSQLL Trigger: CAACAGCTGAGATCTGACCCAGCTACTGTGATGGAT...CTCTGAGATTCTGCACTGTAGTAATTGGGAAAACTCACCTTTAATATTTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS-3UTR TCA 90 bp | GCCCTTCATTCAGACGCTGGGTTAAACCTGAATTCATTTTTAGACTCTTATCTTTCCATGAGTCCATGCTaGCGTACTTCAGAATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALHSDAGLNLNSFLDSYLSMSPC*RTSEYF Trigger: AAAATATTCTGAAGTACGTCAGCATGGACTCATGGA...AAGATAAGAGTCTAAAAATGAATTCAGGTTTAACCCAGCGTCTGAATGAAGGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR TCA 90 bp | ATAGCGATGAAGTGGGATGCTGGACCAATGGATAAATGGTGCTTAGAAACATTATCAGAGCTACGTTATTaGATAAGTTCAAAGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: IAMKWDAGPMDKWCLETLSELRY*ISSKET Trigger: GGTTTCCTTTGAACTTATTCAATAACGTAGCTCTGA...TAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCACTTCATCGCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTTCATTCAGACGCTGGGTTAAACCTGAATTCATTTTTAGACTCTTATCTTGACTTTCTTCCAAGCTaGATACAACTGAATATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALHSDAGLNLNSFLDSYLDFLPS*IQLNMD Trigger: GTCCATATTCAGTTGTATGCAGCTTGGAAGAAAGTC...AAGATAAGAGTCTAAAAATGAATTCAGGTTTAACCCAGCGTCTGAATGAAGGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR GCA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCACTGGACTCCAAGATTaGTATAATATCTTGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTVHFSQYRVFSLPIWGITGLQD*YNILTK Trigger: CTTGGTCAAGATATTATAGCAATCTTGGAGTCCAGT...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAAATATTAAAGGTGAGTTTTCCCAATTACTACAGTGCAGAATCTCAGAGCCAAGTTGCGAATACTaGCTCTCTACAAAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KENIKGEFSQLLQCRISEPSCEY*LSTKRR Trigger: CCTTCTCTTTGTAGAGAGCCAGTATTCGCAACTTGG...CTCTGAGATTCTGCACTGTAGTAATTGGGAAAACTCACCTTTAATATTTTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| 3UTR CAA 72 bp | GGAGGGAGATATGTGGGTAATGTTCCCAAAGTCACCTaGGTTGACTGTTATAGTAAATTTACCTTCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGRYVGNVPKVT*VDCYSKFTFMY Trigger: ATACATGAAGGTAAATTTACTATAACAGTCAACCAAGGTGACTTTGGGAACATTACCCACATATCTCCCTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS-3UTR TCA 90 bp | AAGGAAAATATTAAAGGTGAGTTTTCCCAATTACTACAGTGCAGAATCTCAGAGGATTTAGAAGGATTGTaGGGAAGAGTTCACCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KENIKGEFSQLLQCRISEDLEGL*GRVHLL Trigger: AAGGAGGTGAACTCTTCCTCACAATCCTTCTAAATC...CTCTGAGATTCTGCACTGTAGTAATTGGGAAAACTCACCTTTAATATTTTCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR GCA 90 bp | GCCCTTCATTCAGACGCTGGGTTAAACCTGAATTCATTTTTAGACTCTTATCTTAATTTGCAACCTGAGTaGGCAGTAAATTTTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALHSDAGLNLNSFLDSYLNLQPE*AVNFES Trigger: AGACTCAAAATTTACTGCGCACTCAGGTTGCAAATT...AAGATAAGAGTCTAAAAATGAATTCAGGTTTAACCCAGCGTCTGAATGAAGGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| 3UTR CAA 72 bp | GGAGATATGTGGGTAATGTTCCCAAAGTCACCTTGGTaGACTGTTATAGTAAATTTACCTTCATGTATCACT | + |
|
Preference number: 4 (lower is better) Translates to: GDMWVMFPKSPW*TVIVNLPSCIT Trigger: AGTGATACATGAAGGTAAATTTACTATAACAGTCAACCAAGGTGACTTTGGGAACATTACCCACATATCTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS TCA 90 bp | CACGTTGTGGTCGCGGTAGTAGCTGGAGAGGAAAGTTCTGGACTCTaGATCCATGGGCGGGTATTTTCGGCCTTTGCTTTTCCCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HVVVAVVAGEESSGL*IHGRVFSAFAFPKA Trigger: TGCCTTGGGAAAAGCAAAGGCCGAAAATACCCGCCCATGGATTCAGAGTCCAGAACTTTCCTCTCCAGCTACTACCGCGACCACAACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS CCA 90 bp | TGTGCAGCAGCTTCGAGAGTTCCACGTTGTGGTCGCGGTAGTAGCTaGAGAGGAAAGTTCTGGACTCTGAATCCATGGGCGGGTATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CAAASRVPRCGRGSS*RGKFWTLNPWAGIF Trigger: GAAAATACCCGCCCATGGATTCAGAGTCCAGAACTTTCCTCTCCAGCTACTACCGCGACCACAACGTGGAACTCTCGAAGCTGCTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS TCA 90 bp | TTTCTTCCAAGCTGCATACAACTGAATATGGACTGGGTAGACCCCTaGGTGATGTGGGGCCACTGCGTAGCCCAGGTTGATCGGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLPSCIQLNMDWVDP*VMWGHCVAQVDRNS Trigger: GGAATTCCGATCAACCTGGGCTACGCAGTGGCCCCACATCACTCAGGGGTCTACCCAGTCCATATTCAGTTGTATGCAGCTTGGAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144344.3 ENSMUST00000173932.8 |
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| CDS CCA 90 bp | CTTCCCTTTGCCACTATCGGTAAGAGGCGGTATGTCTCCCTTGCCTaGAGCAATGACCATCTGGTATTGAAACCGACTGGACTCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPFATIGKRRYVSLA*SNDHLVLKPTGLQD Trigger: ATCTTGGAGTCCAGTCGGTTTCAATACCAGATGGTCATTGCTCCAGGCAAGGGAGACATACCGCCTCTTACCGATAGTGGCAAAGGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGTACTGCTGTTCTGCATAGAGATGCAGCCCTCTaGGGAGCCTCTTCTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCETSTAVLHRDAAL*GASSEW Trigger: CCACTCAGAAGAGGCTCCCAAGAGGGCTGCATCTCT...ATGCAGAACAGCAGTACTAGTTTCACACACACACACACACACACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS-3UTR CAA 90 bp | AATTACTCAGGAGGAGGGAGATATGTGGGTAATGTTCCCAAAGTCACCTTGGTTAGAGATGCAGCCCTCTaGGGAGCCTCTTCTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NYSGGGRYVGNVPKVTLVRDAAL*GASSEW Trigger: CCACTCAGAAGAGGCTCCCAAGAGGGCTGCATCTCT...AACCAAGGTGACTTTGGGAACATTACCCACATATCTCCCTCCTCCTGAGTAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS-3UTR CAA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGGTAATGATCTTGGCTTaGGGAACAAGAGATGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGVMILA*GTRDAA Trigger: GGCTGCATCTCTTGTTCCCAAAGCCAAGATCATTAC...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGTGAGCTGTATGGTGATCCCCAGACTAGACACAAGATATTGCCGCAAACCAATGTGTACTTCCCTTaGCCACTATCGGTAAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSELYGDPQTRHKILPQTNVYFP*PLSVRG Trigger: GCCTCTTACCGATAGTGGCAAAGGGAAGTACACATT...GGTTTGCGGCAATATCTTGTGTCTAGTCTGGGGATCACCATACAGCTCACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR CAA 90 bp | CCAGCAGCAGGGTTTATTTGGAGGAAGAGATGGTCATGGTCCCTTATGCTTGGGAATGCCTTCACATCTTaGACATTCATTCTCGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAAGFIWRKRWSWSLMLGNAFTS*TFILVP Trigger: GGGCACGAGAATGAATGTCAAAGATGTGAAGGCATT...CCCAAGCATAAGGGACCATGACCATCTCTTCCTCCAAATAAACCCTGCTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGTACTGCTGTTCTGCATGTCTGCAGTTTCAAGTaGGTCCAGCTGTGCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCETSTAVLHVCSFK*VQLCTK Trigger: CTTTGTGCACAGCTGGACCAACTTGAAACTGCAGAC...ATGCAGAACAGCAGTACTAGTTTCACACACACACACACACACACACACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CAA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCTTGGGGCTAGGAAGATaGCTGATGATGGAGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLLGLGR*LMMEGC Trigger: GCACCCCTCCATCATCAGCAATCTTCCTAGCCCCAA...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS-3UTR CAA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCGGCGGTATGTCTCCCTaGCCTGGAGCAATGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LTVHFSQYRVFSLPIWGIGGMSP*PGAMTI Trigger: GATGGTCATTGCTCCAGGCAAGGGAGACATACCGCC...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR CAA 90 bp | GACAGTCTGCTTTATGAAGTCAGCTGGCCCATGTTATTTTTGAGTCCCTCCCCCACTTTTATCCAATTCTaGAGGTCCTCCTGGATACTC | + |
|
Preference number: 5 (lower is better) Translates to: DSLLYEVSWPMLFLSPSPTFIQF*RSSWIL Trigger: GAGTATCCAGGAGGACCTCAAGAATTGGATAAAAGT...GGGGGAGGGACTCAAAAATAACATGGGCCAGCTGACTTCATAAAGCAGACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
||
| CDS-3UTR CAA 90 bp | TGGCATCCAGGGATTGTGTATGCAATCATGAAGACAAGGGAGTTATCAACCCGCACTTCTTCAAAGGTTTaGGGGCTAGGAAGATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WHPGIVYAIMKTRELSTRTSSKV*GLGRLL Trigger: CAGCAATCTTCCTAGCCCCAAAACCTTTGAAGAAGT...GCGGGTTGATAACTCCCTTGTCTTCATGATTGCATACACAATCCCTGGATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CAA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCGTCTGCAGTTTCAAGTaGGTCCAGCTGTGCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLVCSFK*VQLCTK Trigger: CTTTGTGCACAGCTGGACCAACTTGAAACTGCAGAC...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CAA 90 bp | GCCCTTCATTCAGACGCTGGGTTAAACCTGAATTCATTTTTAGACTCTTATCTTTTGGGGCTAGGAAGATaGCTGATGATGGAGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALHSDAGLNLNSFLDSYLLGLGR*LMMEGC Trigger: GCACCCCTCCATCATCAGCAATCTTCCTAGCCCCAA...AAGATAAGAGTCTAAAAATGAATTCAGGTTTAACCCAGCGTCTGAATGAAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS CCA 90 bp | ATGTCCTGTTGTGATAACTTCATAGAAATTGAACCTCAGGGCAGCTaGATCTTCATGAGATCGTTGGTGCTGGTACCAAGAATATGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: MSCCDNFIEIEPQGS*IFMRSLVLVPRICP Trigger: AGGGCATATTCTTGGTACCAGCACCAACGATCTCATGAAGATCCAGCTGCCCTGAGGTTCAATTTCTATGAAGTTATCACAACAGGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 ENSMUST00000198101.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGTACTGCTGTTCTGCATATAAATAAAGTGCAGTaGTTCCTGTCTTCTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCETSTAVLHINKVQ*FLSSVA Trigger: GGCCACAGAAGACAGGAACAACTGCACTTTATTTAT...ATGCAGAACAGCAGTACTAGTTTCACACACACACACACACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CAA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCGTAATGATCTTGGCTTaGGGAACAAGAGATGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLVMILA*GTRDAA Trigger: GGCTGCATCTCTTGTTCCCAAAGCCAAGATCATTAC...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
||
| CDS-3UTR CAA 90 bp | AACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCTCGGTCCCTTTTCAACTTaGGGGCCTTTGGTAATATGG | + |
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Preference number: 5 (lower is better) Translates to: NSSFQSIQGFLSAYLGYLGPFST*GPLVIW Trigger: CCATATTACCAAAGGCCCCAAAGTTGAAAAGGGACC...GAGATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR CAA 90 bp | AGTTCAGAATCACAATTTCCCAATTTCCTGGGGCTCTCCAGAGACCATGTTGGAAGGATAGTAATGATCTaGGCTTTGGGAACAAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: SSESQFPNFLGLSRDHVGRIVMI*ALGTRD Trigger: ATCTCTTGTTCCCAAAGCCAAGATCATTACTATCCT...TCCAACATGGTCTCTGGAGAGCCCCAGGAAATTGGGAAATTGTGATTCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS-3UTR CAA 90 bp | TGGGATGCTGGACCAATGGATAAATGGTGCTTAGAAACATTAGCCCTTCATTCAATAAATAAAGTGCAGTaGTTCCTGTCTTCTGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: WDAGPMDKWCLETLALHSINKVQ*FLSSVA Trigger: GGCCACAGAAGACAGGAACAACTGCACTTTATTTAT...TGAATGAAGGGCTAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS-3UTR CAA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCACTTCTTCAAAGGTTTaGGGGCTAGGAAGATTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LTVHFSQYRVFSLPIWGITSSKV*GLGRLL Trigger: CAGCAATCTTCCTAGCCCCAAAACCTTTGAAGAAGT...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS-3UTR CAA 90 bp | TTAACAGTTCATTTCAGTCAATACAGGGTTTTCTCTCTGCCTATCTGGGGTATCAATGACCATCTGGTATaGAAACCGACTGGACTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LTVHFSQYRVFSLPIWGINDHLV*KPTGLQ Trigger: TTGGAGTCCAGTCGGTTTCAATACCAGATGGTCATT...GATACCCCAGATAGGCAGAGAGAAAACCCTGTATTGACTGAAATGAACTGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS-3UTR CAA 90 bp | TGGGATGCTGGACCAATGGATAAATGGTGCTTAGAAACATTAGCCCTTCATTCAAGGATAGTAATGATCTaGGCTTTGGGAACAAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: WDAGPMDKWCLETLALHSRIVMI*ALGTRD Trigger: ATCTCTTGTTCCCAAAGCCAAGATCATTACTATCCT...TGAATGAAGGGCTAATGTTTCTAAGCACCATTTATCCATTGGTCCAGCATCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS TCA 72 bp | CCCCTGAGTGATGTGGGGCCACTGCGTAGCCCAGGTTaGTCGGAATTCCATGTTCCAGGGCAAATTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: PLSDVGPLRSPG*SEFHVPGQILC Trigger: ACAAAGAATTTGCCCTGGAACATGGAATTCCGATCAACCTGGGCTACGCAGTGGCCCCACATCACTCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144344.3 ENSMUST00000173932.8 |
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| CDS TCA 72 bp | AGCTGCATACAACTGAATATGGACTGGGTAGACCCCTaGGTGATGTGGGGCCACTGCGTAGCCCAGGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SCIQLNMDWVDP*VMWGHCVAQVD Trigger: ATCAACCTGGGCTACGCAGTGGCCCCACATCACTCAGGGGTCTACCCAGTCCATATTCAGTTGTATGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144344.3 ENSMUST00000173932.8 |
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| CDS TCA 72 bp | CCACAGGTCTGTCGAGGGAGGACCATGATGCTATTATaGATGAAGCCCTTCCTGTACCGCGCAGGTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PQVCRGRTMMLL*MKPFLYRAGFR Trigger: TCTGAAACCTGCGCGGTACAGGAAGGGCTTCATTCATAATAGCATCATGGTCCTCCCTCGACAGACCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144344.3 ENSMUST00000173932.8 |
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| CDS CCA 72 bp | GCCACTATCGGTAAGAGGCGGTATGTCTCCCTTGCCTaGAGCAATGACCATCTGGTATTGAAACCGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: ATIGKRRYVSLA*SNDHLVLKPTG Trigger: TCCAGTCGGTTTCAATACCAGATGGTCATTGCTCCAGGCAAGGGAGACATACCGCCTCTTACCGATAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS TCA 72 bp | GTCGCGGTAGTAGCTGGAGAGGAAAGTTCTGGACTCTaGATCCATGGGCGGGTATTTTCGGCCTTTGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VAVVAGEESSGL*IHGRVFSAFAF Trigger: AAAAGCAAAGGCCGAAAATACCCGCCCATGGATTCAGAGTCCAGAACTTTCCTCTCCAGCTACTACCGCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS CCA 72 bp | AGTAGCTGGAGAGGAAAGTTCTGGACTCTGAATCCATaGGCGGGTATTTTCGGCCTTTGCTTTTCCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SSWRGKFWTLNP*AGIFGLCFSQG Trigger: GCCTTGGGAAAAGCAAAGGCCGAAAATACCCGCCCATGGATTCAGAGTCCAGAACTTTCCTCTCCAGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 |
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| CDS CCA 72 bp | ACTTTGGGGCCTTTGGTAATATGGAGCAGAGGAGACTaGGGGTTCACAGAGCAGTCCTTCAGAGCTACGTTA | + |
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Preference number: 6 (lower is better) Translates to: TLGPLVIWSRGD*GFTEQSFRATL Trigger: TAACGTAGCTCTGAAGGACTGCTCTGTGAACCCCCAGTCTCCTCTGCTCCATATTACCAAAGGCCCCAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS CAA 72 bp | TCCGAGGGGTCTATGAGGATAGTAATGATCTTGGCTTaGGGAACAAGAGATGCAGCCCTCTTGGGAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SEGSMRIVMILA*GTRDAALLGAS Trigger: AGAGGCTCCCAAGAGGGCTGCATCTCTTGTTCCCAAAGCCAAGATCATTACTATCCTCATAGACCCCTCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 ENSMUST00000198101.2 |
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| CDS CAA 90 bp | AAGAGGCGGTATGTCTCCCTTGCCTGGAGCAATGACCATCTGGTATaGAAACCGACTGGACTCCAAGATTGCTATAATATCTTGACCAAG | + |
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Preference number: 6 (lower is better) Translates to: KRRYVSLAWSNDHLV*KPTGLQDCYNILTK Trigger: CTTGGTCAAGATATTATAGCAATCTTGGAGTCCAGTCGGTTTCAATACCAGATGGTCATTGCTCCAGGCAAGGGAGACATACCGCCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS TCA 72 bp | ATGTCTCCCTTGCCTGGAGCAATGACCATCTGGTATTaGAACCGACTGGACTCCAAGATTGCTATAATATCT | + |
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Preference number: 6 (lower is better) Translates to: MSPLPGAMTIWY*NRLDSKIAIIS Trigger: AGATATTATAGCAATCTTGGAGTCCAGTCGGTTTCAATACCAGATGGTCATTGCTCCAGGCAAGGGAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS CCA 72 bp | TGTGATAACTTCATAGAAATTGAACCTCAGGGCAGCTaGATCTTCATGAGATCGTTGGTGCTGGTACCAAGA | + |
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Preference number: 6 (lower is better) Translates to: CDNFIEIEPQGS*IFMRSLVLVPR Trigger: TCTTGGTACCAGCACCAACGATCTCATGAAGATCCAGCTGCCCTGAGGTTCAATTTCTATGAAGTTATCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000173932.8 ENSMUST00000174648.6 ENSMUST00000198101.2 |
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| CDS CAA 72 bp | TATGTCTCCCTTGCCTGGAGCAATGACCATCTGGTATaGAAACCGACTGGACTCCAAGATTGCTATAATATC | + |
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Preference number: 6 (lower is better) Translates to: YVSLAWSNDHLV*KPTGLQDCYNI Trigger: GATATTATAGCAATCTTGGAGTCCAGTCGGTTTCAATACCAGATGGTCATTGCTCCAGGCAAGGGAGACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS CAA 90 bp | AGAGGAGACTGGGGGTTCACAGAGCAGTCCTTCAGAGCTACGTTATaGAATAAGTTCAAAGGAAACCCTTTCAGTTGTGTAGTTGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: RGDWGFTEQSFRATL*NKFKGNPFSCVVGK Trigger: TTTACCAACTACACAACTGAAAGGGTTTCCTTTGAACTTATTCAATAACGTAGCTCTGAAGGACTGCTCTGTGAACCCCCAGTCTCCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS GCA 72 bp | GACCATCTGGTATTGAAACCGACTGGACTCCAAGATTaGTATAATATCTTGACCAAGTTGCGAATACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: DHLVLKPTGLQD*YNILTKLRILA Trigger: AGCCAGTATTCGCAACTTGGTCAAGATATTATAGCAATCTTGGAGTCCAGTCGGTTTCAATACCAGATGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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| CDS CAA 72 bp | TGGGGGTTCACAGAGCAGTCCTTCAGAGCTACGTTATaGAATAAGTTCAAAGGAAACCCTTTCAGTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: WGFTEQSFRATL*NKFKGNPFSCV Trigger: TACACAACTGAAAGGGTTTCCTTTGAACTTATTCAATAACGTAGCTCTGAAGGACTGCTCTGTGAACCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173932.8 |
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