Pregenerated sensors for NDRG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036564Ensembl transcript IDs: ENSMUST00000041318.14, ENSMUST00000073139.14, ENSMUST00000080666.8, ENSMUST00000160915.8, ENSMUST00000160964.8, ENSMUST00000162578.8, ENSMUST00000166358.8
Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TTGACCTGGCCCATCCCCTCACTGCTGTCTGAGTGGGCGCAGGGCTaGGGGCGGCTGCCGTCCACGGAACTGGCGCTGGTGAGGGACGCG | + |
Preference number: 1 (lower is better) Translates to: LTWPIPSLLSEWAQG*GRLPSTELALVRDA Trigger: CGCGTCCCTCACCAGCGCCAGTTCCGTGGACGGCAGCCGCCCTCAGCCCTGCGCCCACTCAGACAGCAGTGAGGGGATGGGCCAGGTCAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR TCA 90 bp | CACCTCCATGGTGTGGTTGACCTGGCCCATCCCCTCACTGCTGTCTaGGTGGGCGCAGGGCTGAGGGCGGCTGCCGTCCACGGAACTGGC | + |
Preference number: 1 (lower is better) Translates to: HLHGVVDLAHPLTAV*VGAGLRAAAVHGTG Trigger: GCCAGTTCCGTGGACGGCAGCCGCCCTCAGCCCTGCGCCCACTCAGACAGCAGTGAGGGGATGGGCCAGGTCAACCACACCATGGAGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR CCA 90 bp | CCTCTGCCAACAGGGACAAGAGACCAGGTGACCTTTGCCTCAGGGTaGGACAAGGCCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCC | + |
Preference number: 1 (lower is better) Translates to: PLPTGTRDQVTFASG*DKALWWQGMGVPAP Trigger: GGGGGCAGGAACCCCCATACCCTGCCACCACAGGGCCTTGTCCCACCCTGAGGCAAAGGTCACCTGGTCTCTTGTCCCTGTTGGCAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR GCA 90 bp | CTCAGGGTGGGACAAGGCCCTGTGGTGGCAGGGTATGGGGGTTCCTaGCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTGGCCT | + |
Preference number: 1 (lower is better) Translates to: LRVGQGPVVAGYGGS*PHVRVLHILQPGWP Trigger: AGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGGCCTTGTCCCACCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR CCA 90 bp | TGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTaGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAA | + |
Preference number: 1 (lower is better) Translates to: WGFLPPCQGSPYSSA*LALHHLSCPESTRK Trigger: TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGCAGGAACCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR TCA 90 bp | ATGGCGGGCATAGTTGTGGGCTGTAGGAGGCATGGAACCTTTGTTTaGGGATGGCCCATTTCCCACCCAAGGGCCAGGCAATCTCCAGCC | + |
Preference number: 1 (lower is better) Translates to: MAGIVVGCRRHGTFV*GWPISHPRARQSPA Trigger: GGCTGGAGATTGCCTGGCCCTTGGGTGGGAAATGGGCCATCCTCAAACAAAGGTTCCATGCCTCCTACAGCCCACAACTATGCCCGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR CCA 90 bp | GGTTCCTGCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTaGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGG | + |
Preference number: 1 (lower is better) Translates to: GSCPHVRVLHILQPG*PYTTCPAQRAPGKW Trigger: CCATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGCAGGAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR GCA 90 bp | AACATTTTAACCTCTGCCAACAGGGACAAGAGACCAGGTGACCTTTaGCTCAGGGTGGGACAAGGCCCTGTGGTGGCAGGGTATGGGGGT | + |
Preference number: 1 (lower is better) Translates to: NILTSANRDKRPGDL*LRVGQGPVVAGYGG Trigger: ACCCCCATACCCTGCCACCACAGGGCCTTGTCCCACCCTGAGGCAAAGGTCACCTGGTCTCTTGTCCCTGTTGGCAGAGGTTAAAATGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR CCA 90 bp | CAAGGTCTCTGCGGCTGTTGTACATGTTCCAGAAGAGCTGCAGGTTaGCCTGGTTCACCACGTTTGAGATCTGCTGCCGGTAGCTCTGCA | + |
Preference number: 1 (lower is better) Translates to: QGLCGCCTCSRRAAG*PGSPRLRSAAGSSA Trigger: TGCAGAGCTACCGGCAGCAGATCTCAAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACATGTACAACAGCCGCAGAGACCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR TCA 90 bp | CCTCCAACTATCAGCGCCCTGGGGCAGCCAGGCAGCCTAAACAGTTaGGCCTTCCCTGTGATAGGAAACACGACACACGTAGACTTAATT | + |
Preference number: 1 (lower is better) Translates to: PPTISALGQPGSLNS*AFPVIGNTTHVDLI Trigger: AATTAAGTCTACGTGTGTCGTGTTTCCTATCACAGGGAAGGCTCAACTGTTTAGGCTGCCTGGCTGCCCCAGGGCGCTGATAGTTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073139.14 |
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3UTR CCA 90 bp | AGGAAGACCACCAGAATCTGCCATCTTCAGGAAGGTCGTAGTGGTTaGGTCCAGTTTGGAGTTACACTCAACCACCCCTTCCTCAGCAGG | + |
Preference number: 1 (lower is better) Translates to: RKTTRICHLQEGRSG*VQFGVTLNHPFLSR Trigger: CCTGCTGAGGAAGGGGTGGTTGAGTGTAACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR TCA 90 bp | TATACACACTTAGTGCTTTCTCTCCTCTCTGGGGATGAGAGCAGATaGAACCAATGGCCAGGCTGTGAGCGCCTACTTGGTGAGATGGCG | + |
Preference number: 1 (lower is better) Translates to: YTHLVLSLLSGDESR*NQWPGCERLLGEMA Trigger: CGCCATCTCACCAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCCAGAGAGGAGAGAAAGCACTAAGTGTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR GCA 90 bp | AGTCAGCTTCCCTGGTTGTGTCACCTGAGGAAGACCACCAGAATCTaGCATCTTCAGGAAGGTCGTAGTGGTTGGGTCCAGTTTGGAGTT | + |
Preference number: 1 (lower is better) Translates to: SQLPWLCHLRKTTRI*HLQEGRSGWVQFGV Trigger: AACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGGGAAGCTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR CCA 90 bp | TCTGGGACAAGAGGGACCTACAGTACCTGCCAGCTTCCAAAGGGATaGGTAATCATGAAGTTCTCAGGGGCTACACACAGCATACACAGC | + |
Preference number: 1 (lower is better) Translates to: SGTRGTYSTCQLPKG*VIMKFSGATHSIHS Trigger: GCTGTGTATGCTGTGTGTAGCCCCTGAGAACTTCATGATTACCCATCCCTTTGGAAGCTGGCAGGTACTGTAGGTCCCTCTTGTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR CCA 90 bp | AGGAAGACCACCAGAATCTGCCATCTTCAGGAAGGTCGTAGTGGTTaGGTCCAGTTTGGAGTTACACTCAACCTGGGAACAAGGAGCCAG | + |
Preference number: 1 (lower is better) Translates to: RKTTRICHLQEGRSG*VQFGVTLNLGTRSQ Trigger: CTGGCTCCTTGTTCCCAGGTTGAGTGTAACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
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3UTR GCA 90 bp | CATCAGAGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTaGCAGATCCAGGGGCTGGGCTGGGCTTTCTTCAGTACTGTATCT | + |
Preference number: 1 (lower is better) Translates to: HQSFSSLPTIFKPHI*QIQGLGWAFFSTVS Trigger: AGATACAGTACTGAAGAAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCTCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR TCA 90 bp | ACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTGAGTaGACTGAACCGGGGATAGGAAACACTCCACTGGACTCCAGAGCA | + |
Preference number: 1 (lower is better) Translates to: TTSKQSHSVFTEARE*TEPGIGNTPLDSRA Trigger: TGCTCTGGAGTCCAGTGGAGTGTTTCCTATCCCCGGTTCAGTTCACTCACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR CCA 90 bp | AATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAATaGATGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCAC | + |
Preference number: 1 (lower is better) Translates to: NGLQLQKGAACATDK*MWVSSCLRTPIQYH Trigger: GTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR CCA 90 bp | TTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAATGGATGTaGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACATACAT | + |
Preference number: 1 (lower is better) Translates to: LQLQKGAACATDKWM*VSSCLRTPIQYHIH Trigger: ATGTATGTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR TCA 90 bp | CTTTGTACAGAGAGGAAAATAATGAACTCCATTAAAAGTTCATCTTaGCCAAAGAGAAGACAACTACCAATGGGAAACCACATACAGGAA | + |
Preference number: 1 (lower is better) Translates to: LCTERKIMNSIKSSS*PKRRQLPMGNHIQE Trigger: TTCCTGTATGTGGTTTCCCATTGGTAGTTGTCTTCTCTTTGGTCAAGATGAACTTTTAATGGAGTTCATTATTTTCCTCTCTGTACAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | GCAGGGCTGAGGGCGGCTGCCGTCCACGGAACTGGCGCTGGTGAGGGACGCGGTCAGTGTCTGGTAAAGTaGTGGTCAAGCCAGAGAGCT | + |
Preference number: 2 (lower is better) Translates to: AGLRAAAVHGTGAGEGRGQCLVK*WSSQRA Trigger: AGCTCTCTGGCTTGACCAGCACTTTACCAGACACTG...ACCGCGTCCCTCACCAGCGCCAGTTCCGTGGACGGCAGCCGCCCTCAGCCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GCAGGGCTGAGGGCGGCTGCCGTCCACGGAACTGGCGCTGGTGAGGGACGCGGTTGTCTGGTAAAGTGCTaGTCAAGCCAGAGAGCTTGG | + |
Preference number: 2 (lower is better) Translates to: AGLRAAAVHGTGAGEGRGCLVKC*SSQRAW Trigger: CCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACA...ACCGCGTCCCTCACCAGCGCCAGTTCCGTGGACGGCAGCCGCCCTCAGCCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | GGTTGGCCTGGTTCACCACGTTTGAGATCTGCTGCCGGTAGCTCTGCACCAGCTCCCCTGAGGGAACTGTaGCGCTCCCACCTGCTGCCC | + |
Preference number: 2 (lower is better) Translates to: GWPGSPRLRSAAGSSAPAPLREL*RSHLLP Trigger: GGGCAGCAGGTGGGAGCGTCACAGTTCCCTCAGGGG...AGCTGGTGCAGAGCTACCGGCAGCAGATCTCAAACGTGGTGAACCAGGCCAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | CCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATATGGGGAGGGGCCACACTaGGTGAGACAGGAGTGTGTA | + |
Preference number: 2 (lower is better) Translates to: PCGGRVWGFLPPCQGSPYGEGPH*VRQECV Trigger: TACACACTCCTGTCTCACTCAGTGTGGCCCCTCCCC...ATATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGGGAAGATGAGCCGGTaGAGAGATGGCAGTGGGACC | + |
Preference number: 2 (lower is better) Translates to: SAWLALHHLSCPESTRKMGKMSR*RDGSGT Trigger: GGTCCCACTGCCATCTCTGCACCGGCTCATCTTCCC...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GGCCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATATCCAGGGGCTGGGCTaGGCTTTCTTCAGTACTGTA | + |
Preference number: 2 (lower is better) Translates to: GPVVAGYGGSCPHVRVLHIQGLG*AFFSTV Trigger: TACAGTACTGAAGAAAGCCCAGCCCAGCCCCTGGAT...ATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | CCACGTTTGAGATCTGCTGCCGGTAGCTCTGCACCAGCTCCGTGTTGTTCACCAGGCAGCGGAGTGTCTTaGCATTGGGCACCGTCCCAG | + |
Preference number: 2 (lower is better) Translates to: PRLRSAAGSSAPAPCCSPGSGVS*HWAPSQ Trigger: CTGGGACGGTGCCCAATGCCAAGACACTCCGCTGCC...TGGTGAACAACACGGAGCTGGTGCAGAGCTACCGGCAGCAGATCTCAAACGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | GCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTGGGGAGGGGCCACACTaGGTGAGACAGGAGTGTGTA | + |
Preference number: 2 (lower is better) Translates to: AHYPPSSNLTSARSRGWAGEGPH*VRQECV Trigger: TACACACTCCTGTCTCACTCAGTGTGGCCCCTCCCC...AGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | GCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTGGCCTTACACCACCTGGACAAGAGACCAGGTaGCCTTTGCCTCAGGGTGGG | + |
Preference number: 2 (lower is better) Translates to: APMSGFSIFFSLAGLTPPGQETR*PLPQGG Trigger: CCCACCCTGAGGCAAAGGTCACCTGGTCTCTTGTCC...AGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GGTCCAAGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACGTGCAGAGATGGCAGTaGGACCTGGGGGCAGGTAAG | + |
Preference number: 2 (lower is better) Translates to: GPRLPTGLTPTHIRALAHVQRWQ*DLGAGK Trigger: CTTACCTGCCCCCAGGTCCCACTGCCATCTCTGCAC...GTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCTTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GGTAAAGTGCTGGTCAAGCCAGAGAGCTTGGTGGCAGCCCAGTCAATCCAGCCTGTGCAGAGATGGCAGTaGGACCTGGGGGCAGGTAAG | + |
Preference number: 2 (lower is better) Translates to: GKVLVKPESLVAAQSIQPVQRWQ*DLGAGK Trigger: CTTACCTGCCCCCAGGTCCCACTGCCATCTCTGCAC...AGGCTGGATTGACTGGGCTGCCACCAAGCTCTCTGGCTTGACCAGCACTTTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | TCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAGCCAGATCCAGGGGCTaGGCTGGGCTTTCTTCAGTA | + |
Preference number: 2 (lower is better) Translates to: SSAWLALHHLSCPESTRKARSRG*AGLSSV Trigger: TACTGAAGAAAGCCCAGCCCAGCCCCTGGATCTGGC...TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | TCTCTGGGGATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGGGACAAGAGACCAGGTaGCCTTTGCCTCAGGGTGGG | + |
Preference number: 2 (lower is better) Translates to: SLGMRADETNGQAVSAYLGQETR*PLPQGG Trigger: CCCACCCTGAGGCAAAGGTCACCTGGTCTCTTGTCC...CAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | GCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTCCAGCTCCTCCTGGCTaGAGAGATGGGAGAGTACAG | + |
Preference number: 2 (lower is better) Translates to: AHYPPSSNLTSARSRGWAPAPPG*RDGRVQ Trigger: CTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGG...AGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | GGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTGCTGTCGGGAAGATGAGCCGGTaGAGAGATGGCAGTGGGACC | + |
Preference number: 2 (lower is better) Translates to: GVCKASPSHHLRLLCCAVGKMSR*RDGSGT Trigger: GGTCCCACTGCCATCTCTGCACCGGCTCATCTTCCC...GACAGCACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | CCCAAGGGCCAGGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTGCCAGATCCAGGGGCTaGGCTGGGCTTTCTTCAGTA | + |
Preference number: 2 (lower is better) Translates to: PKGQAISSPSSKQRSLYLARSRG*AGLSSV Trigger: TACTGAAGAAAGCCCAGCCCAGCCCCTGGATCTGGC...AAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCCTGGCCCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GGCCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATTCCAGCCTTTGCCGTTaGGGTCAATGTTCATCAACA | + |
Preference number: 2 (lower is better) Translates to: GPVVAGYGGSCPHVRVLHSSLCR*GQCSST Trigger: TGTTGATGAACATTGACCCCAACGGCAAAGGCTGGA...ATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | CTTCCTCAGCAGGTGCATTATCTCCGACTACCAGCATCACTGGGCAGCGGAGTGAGCCAGAGAGCTTGGTaGCAGCCCAGTCAATCCAGC | + |
Preference number: 2 (lower is better) Translates to: LPQQVHYLRLPASLGSGVSQRAW*QPSQSS Trigger: GCTGGATTGACTGGGCTGCCACCAAGCTCTCTGGCT...CACTCCGCTGCCCAGTGATGCTGGTAGTCGGAGATAATGCACCTGCTGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | AGTGTCTTGGCATTGGGCACCGTCCCAGGTCGGTTAATATCAAGGTCTCTGCGGCCAGCTCCTCCTGGCTaGAGAGATGGGAGAGTACAG | + |
Preference number: 2 (lower is better) Translates to: SVLALGTVPGRLISRSLRPAPPG*RDGRVQ Trigger: CTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGG...CCGCAGAGACCTTGATATTAACCGACCTGGGACGGTGCCCAATGCCAAGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | CCACGTTTGAGATCTGCTGCCGGTAGCTCTGCACCAGCTCCGTGTTGTTCACCACTGGTTCACCACGTTTaGGATCTGCTGCCGGTAGCT | + |
Preference number: 2 (lower is better) Translates to: PRLRSAAGSSAPAPCCSPLVHHV*DLLPVA Trigger: AGCTACCGGCAGCAGATCTCAAACGTGGTGAACCAG...TGGTGAACAACACGGAGCTGGTGCAGAGCTACCGGCAGCAGATCTCAAACGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | ATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACTGGGAAGATGAGCCGGTaGAGAGATGGCAGTGGGACC | + |
Preference number: 2 (lower is better) Translates to: MAVCLERPLVATILMTVTGKMSR*RDGSGT Trigger: GGTCCCACTGCCATCTCTGCACCGGCTCATCTTCCC...AGTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | TCCAAAGGGATGGGTAATCATGAAGTTCTCAGGGGCTACACACAGCATACACAGGACGCTCCCACCTGCTaGCCAGGGGCATCCACGTGG | + |
Preference number: 2 (lower is better) Translates to: SKGMGNHEVLRGYTQHTQDAPTC*PGASTW Trigger: CCACGTGGATGCCCCTGGGCAGCAGGTGGGAGCGTC...CTGTGTATGCTGTGTGTAGCCCCTGAGAACTTCATGATTACCCATCCCTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | AATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACGTGCAGAGATGGCAGTaGGACCTGGGGGCAGGTAAG | + |
Preference number: 2 (lower is better) Translates to: NGCLSRAPSCGYHPHDCHVQRWQ*DLGAGK Trigger: CTTACCTGCCCCCAGGTCCCACTGCCATCTCTGCAC...GTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | ATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACTGTGCAGAGATGGCAGTaGGACCTGGGGGCAGGTAAG | + |
Preference number: 2 (lower is better) Translates to: MAVCLERPLVATILMTVTVQRWQ*DLGAGK Trigger: CTTACCTGCCCCCAGGTCCCACTGCCATCTCTGCAC...AGTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGATCCAGGGGCTGGGCTaGGCTTTCTTCAGTACTGTA | + |
Preference number: 2 (lower is better) Translates to: SAWLALHHLSCPESTRKMIQGLG*AFFSTV Trigger: TACAGTACTGAAGAAAGCCCAGCCCAGCCCCTGGAT...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | TCTCTGGGGATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGGCCAGATCCAGGGGCTaGGCTGGGCTTTCTTCAGTA | + |
Preference number: 2 (lower is better) Translates to: SLGMRADETNGQAVSAYLARSRG*AGLSSV Trigger: TACTGAAGAAAGCCCAGCCCAGCCCCTGGATCTGGC...CAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGAGAAGAGCTGCAGGTTaGCCTGGTTCACCACGTTTG | + |
Preference number: 2 (lower is better) Translates to: SAWLALHHLSCPESTRKMRRAAG*PGSPRL Trigger: CAAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCT...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | GTACAGTGTCTGGTAAAGTGCTGGTCAAGCCAGAGAGCTTGGTGGCAGCCCAGTGACTACCAGCATCACTaGGCAGCGGAGTGTCTTGGC | + |
Preference number: 2 (lower is better) Translates to: VQCLVKCWSSQRAWWQPSDYQHH*AAECLG Trigger: GCCAAGACACTCCGCTGCCCAGTGATGCTGGTAGTC...ACTGGGCTGCCACCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACACTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | TCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAAAACTAAAGGGAAGATaGGCCGGTGCAGAGATGGCA | + |
Preference number: 2 (lower is better) Translates to: SSAWLALHHLSCPESTRKKLKGR*AGAEMA Trigger: TGCCATCTCTGCACCGGCTCATCTTCCCTTTAGTTT...TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | ATTCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAACTAAAGGGAAGATaGGCCGGTGCAGAGATGGCA | + |
Preference number: 2 (lower is better) Translates to: ILQPGWPYTTCPAQRAPGKLKGR*AGAEMA Trigger: TGCCATCTCTGCACCGGCTCATCTTCCCTTTAGTTT...TCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | AGTATTCAAGACCAGCCTGGGCTACAGAAAGATTGCTCAACCCTCCCCCAACCAGGACAAGAGACCAGGTaGCCTTTGCCTCAGGGTGGG | + |
Preference number: 2 (lower is better) Translates to: SIQDQPGLQKDCSTLPQPGQETR*PLPQGG Trigger: CCCACCCTGAGGCAAAGGTCACCTGGTCTCTTGTCC...TGGTTGGGGGAGGGTTGAGCAATCTTTCTGTAGCCCAGGCTGGTCTTGAATACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073139.14 |
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3UTR-3UTR TCA 90 bp | TTGATGCAAGGGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGCCACATCATGGTAGGTaGGGATGGCTGGGCGGTTCC | + |
Preference number: 2 (lower is better) Translates to: LMQGLQERDTLKVQGCPLPHHGR*GWLGGS Trigger: GGAACCGCCCAGCCATCCTCACCTACCATGATGTGG...CAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACCCTTGCATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
||
3UTR-3UTR GCA 90 bp | TTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGGAAGATGAGCCGGTaGAGAGATGGCAGTGGGACC | + |
Preference number: 2 (lower is better) Translates to: FSSLPTIFKPHICQIQGLGKMSR*RDGSGT Trigger: GGTCCCACTGCCATCTCTGCACCGGCTCATCTTCCC...CAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR GCA 90 bp | GGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGGTCTGACTCCGGGACCTACAGTACCTaGCAGCTTCCAAAGGGATGG | + |
Preference number: 2 (lower is better) Translates to: GYRKGTLLRSKAAHWSDSGTYST*QLPKGW Trigger: CCATCCCTTTGGAAGCTGGCAGGTACTGTAGGTCCC...GGAGTCAGACCAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR GCA 90 bp | ACTGGACTCCAGAGCAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATAGCATGGCGGCCAGCTaGTCCATGGAGGGGAACTGG | + |
Preference number: 2 (lower is better) Translates to: TGLQSSLEMAYSYRKGRHSMAAS*SMEGNW Trigger: CCAGTTCCCCTCCATGGAGCAGCTGGCCGCCATGCT...ATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTGCTCTGGAGTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | CAGCGCCCTGGGGCAGCCAGGCAGCCTAAACAGTTGAGCCTTCCCTGTGATAGGTGTGCTGTCCCAAGGTaGATCCCCTCATTTCTTTTT | + |
Preference number: 2 (lower is better) Translates to: QRPGAARQPKQLSLPCDRCAVPR*IPSFLF Trigger: AAAAAGAAATGAGGGGATCCACCTTGGGACAGCACA...CCTATCACAGGGAAGGCTCAACTGTTTAGGCTGCCTGGCTGCCCCAGGGCGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073139.14 |
||
3UTR-3UTR CCA 90 bp | CTTCCTCAGCAGGTGCATTATCTCCGACTACCAGCATCACTGGGCAGCGGAGTGATCCAGGGGCTGGGCTaGGCTTTCTTCAGTACTGTA | + |
Preference number: 2 (lower is better) Translates to: LPQQVHYLRLPASLGSGVIQGLG*AFFSTV Trigger: TACAGTACTGAAGAAAGCCCAGCCCAGCCCCTGGAT...CACTCCGCTGCCCAGTGATGCTGGTAGTCGGAGATAATGCACCTGCTGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | CCCAAGGGCCAGGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTTTGTCTGTGACACACTaGCCCAAGTTGACCAGGGCA | + |
Preference number: 2 (lower is better) Translates to: PKGQAISSPSSKQRSLYLLSVTH*PKLTRA Trigger: TGCCCTGGTCAACTTGGGCCAGTGTGTCACAGACAA...AAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCCTGGCCCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GTGTTGTTCACCAGCTCCTCCTGGCTGAAGAGATGGGAGAGTACAGTGTCTGGTAGCCAGAGAGCTTGGTaGCAGCCCAGTCAATCCAGC | + |
Preference number: 2 (lower is better) Translates to: VLFTSSSWLKRWESTVSGSQRAW*QPSQSS Trigger: GCTGGATTGACTGGGCTGCCACCAAGCTCTCTGGCT...ACCAGACACTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAACAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | CCCAAGGGCCAGGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTAGCTGCAGGTTGGCCTaGTTCACCACGTTTGAGATC | + |
Preference number: 2 (lower is better) Translates to: PKGQAISSPSSKQRSLYLSCRLA*FTTFEI Trigger: GATCTCAAACGTGGTGAACCAGGCCAACCTGCAGCT...AAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCCTGGCCCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | TCACCACGTTTGAGATCTGCTGCCGGTAGCTCTGCACCAGCTCCGTGTTGTTCACCAGGGGCATCCACGTaGCACACCACAAAGTGTTTG | + |
Preference number: 2 (lower is better) Translates to: SPRLRSAAGSSAPAPCCSPGAST*HTTKCL Trigger: CAAACACTTTGTGGTGTGCCACGTGGATGCCCCTGG...TGAACAACACGGAGCTGGTGCAGAGCTACCGGCAGCAGATCTCAAACGTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR CAA 90 bp | CCAGAATCTGCCATCTTCAGGAAGGTCGTAGTGGTTGGGTCCAGTTaGGAGTTACACTCAACCTGGGAACAAGGAGCCAGCACCCCTTCC | + |
Preference number: 2 (lower is better) Translates to: PESAIFRKVVVVGSS*ELHSTWEQGASTPS Trigger: GGAAGGGGTGCTGGCTCCTTGTTCCCAGGTTGAGTGTAACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGCAGATTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
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3UTR-3UTR TCA 90 bp | GCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTAAACTAAAGGGAAGATaGGCCGGTGCAGAGATGGCA | + |
Preference number: 2 (lower is better) Translates to: AHYPPSSNLTSARSRGWAKLKGR*AGAEMA Trigger: TGCCATCTCTGCACCGGCTCATCTTCCCTTTAGTTT...AGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | GAGACAGGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTCACACTGGCCCAAGTTaGCCAGGGCACTGTGACAAA | + |
Preference number: 2 (lower is better) Translates to: ETGVCKASPSHHLRLLCCHTGPS*PGHCDK Trigger: TTTGTCACAGTGCCCTGGTCAACTTGGGCCAGTGTG...ACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCCTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | TGGAACCTTTGTTTGAGGATGGCCCATTTCCCACCCAAGGGCCAGGCAATCTCCCCTGGTTGTGTCACCTaGGGAAGACCACCAGAATCT | + |
Preference number: 2 (lower is better) Translates to: WNLCLRMAHFPPKGQAISPGCVT*GRPPES Trigger: AGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGG...GGAGATTGCCTGGCCCTTGGGTGGGAAATGGGCCATCCTCAAACAAAGGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | CCACGTTTGAGATCTGCTGCCGGTAGCTCTGCACCAGCTCCGTGTTGTTCACCAAGCACAGCTTGTGATTaGGACCCACATCATGGTAGG | + |
Preference number: 2 (lower is better) Translates to: PRLRSAAGSSAPAPCCSPSTACD*DPHHGR Trigger: CCTACCATGATGTGGGTCTCAATCACAAGCTGTGCT...TGGTGAACAACACGGAGCTGGTGCAGAGCTACCGGCAGCAGATCTCAAACGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | GGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGGTCTGACTCCTTACACCACCTGTCCTaGCCAGAGAGCACCAGGAAA | + |
Preference number: 2 (lower is better) Translates to: GYRKGTLLRSKAAHWSDSLHHLS*PESTRK Trigger: TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAA...GGAGTCAGACCAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | ATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGGTGAGATGGGGGACCTACAGTACCTaGCAGCTTCCAAAGGGATGG | + |
Preference number: 2 (lower is better) Translates to: MRADETNGQAVSAYLVRWGTYST*QLPKGW Trigger: CCATCCCTTTGGAAGCTGGCAGGTACTGTAGGTCCC...CCATCTCACCAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | AGTACAGTGTCTGGTAAAGTGCTGGTCAAGCCAGAGAGCTTGGTGGCAGCCCAGATGTTCCAGAAGAGCTaGAGGTTGGCCTGGTTCACC | + |
Preference number: 2 (lower is better) Translates to: STVSGKVLVKPESLVAAQMFQKS*RLAWFT Trigger: GGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACAT...CTGGGCTGCCACCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACACTGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | ATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTCTTTGTGCAGAGATGGCAGTaGGACCTGGGGGCAGGTAAG | + |
Preference number: 2 (lower is better) Translates to: ISSPSSKQRSLYLPICVFVQRWQ*DLGAGK Trigger: CTTACCTGCCCCCAGGTCCCACTGCCATCTCTGCAC...AAAGACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | TCTCTGGGGATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGATCCAGGGGCTGGGCTaGGCTTTCTTCAGTACTGTA | + |
Preference number: 2 (lower is better) Translates to: SLGMRADETNGQAVSAYLIQGLG*AFFSTV Trigger: TACAGTACTGAAGAAAGCCCAGCCCAGCCCCTGGAT...CAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | CCACGTTTGAGATCTGCTGCCGGTAGCTCTGCACCAGCTCCGTGTTGTTCACCATGTCTGGTAAAGTGCTaGTCAAGCCAGAGAGCTTGG | + |
Preference number: 2 (lower is better) Translates to: PRLRSAAGSSAPAPCCSPCLVKC*SSQRAW Trigger: CCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACA...TGGTGAACAACACGGAGCTGGTGCAGAGCTACCGGCAGCAGATCTCAAACGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | TGGAACCTTTGTTTGAGGATGGCCCATTTCCCACCCAAGGGCCAGGCAATCTCCCTCAGTCAGCTTCCCTaGTTGTGTCACCTGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: WNLCLRMAHFPPKGQAISLSQLP*LCHLRK Trigger: CTTCCTCAGGTGACACAACCAGGGAAGCTGACTGAG...GGAGATTGCCTGGCCCTTGGGTGGGAAATGGGCCATCCTCAAACAAAGGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGTTGACCAGGGCACTGTaGCAAATACTTGGTGAAATC | + |
Preference number: 2 (lower is better) Translates to: SAWLALHHLSCPESTRKMLTRAL*QILGEI Trigger: GATTTCACCAAGTATTTGTCACAGTGCCCTGGTCAA...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | AGTATTCAAGACCAGCCTGGGCTACAGAAAGATTGCTCAACCCTCCCCCAACCACACACTGGCCCAAGTTaGCCAGGGCACTGTGACAAA | + |
Preference number: 2 (lower is better) Translates to: SIQDQPGLQKDCSTLPQPHTGPS*PGHCDK Trigger: TTTGTCACAGTGCCCTGGTCAACTTGGGCCAGTGTG...TGGTTGGGGGAGGGTTGAGCAATCTTTCTGTAGCCCAGGCTGGTCTTGAATACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073139.14 |
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3UTR-3UTR TCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGGGGGATGAGAGCAGATaGAACCAATGGCCAGGCTGT | + |
Preference number: 2 (lower is better) Translates to: SFSSLPTIFKPHICQIQGGDESR*NQWPGC Trigger: ACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCC...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 53% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | TCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAATGTGCTGTCCCAAGGTaGATCCCCTCATTTCTTTTT | + |
Preference number: 2 (lower is better) Translates to: SSAWLALHHLSCPESTRKCAVPR*IPSFLF Trigger: AAAAAGAAATGAGGGGATCCACCTTGGGACAGCACA...TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | ATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGGTGAGATGGATTCTTCAGCCTGGCTaGCCTTACACCACCTGTCCT | + |
Preference number: 2 (lower is better) Translates to: MRADETNGQAVSAYLVRWILQPG*PYTTCP Trigger: AGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGAAT...CCATCTCACCAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GTTTGGAGTTACACTCAACCTGGGAACAAGGAGCCAGCACCCCTTCCTCAGCAGTCCTGGCTGAAGAGATaGGAGAGTACAGTGTCTGGT | + |
Preference number: 2 (lower is better) Translates to: VWSYTQPGNKEPAPLPQQSWLKR*ESTVSG Trigger: ACCAGACACTGTACTCTCCCATCTCTTCAGCCAGGA...CTGCTGAGGAAGGGGTGCTGGCTCCTTGTTCCCAGGTTGAGTGTAACTCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
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3UTR-3UTR CCA 90 bp | CAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAACGGCCAGCTGCTCCATaGAGGGGAACTGGTACCCCT | + |
Preference number: 2 (lower is better) Translates to: QSRNGLQLQKGAACATDKRPAAP*RGTGTP Trigger: AGGGGTACCAGTTCCCCTCCATGGAGCAGCTGGCCG...TTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | ATTCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGATGGCTACCATCCTCATaGCTGTCACTTCTACTATTA | + |
Preference number: 2 (lower is better) Translates to: ILQPGWPYTTCPAQRAPGWLPSS*LSLLLL Trigger: TAATAGTAGAAGTGACAGTCATGAGGATGGTAGCCA...TCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | ACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTGGGCTTTTGTGCTGTCCCAAGGTaGATCCCCTCATTTCTTTTT | + |
Preference number: 2 (lower is better) Translates to: THHLQTSHLPDPGAGLGFCAVPR*IPSFLF Trigger: AAAAAGAAATGAGGGGATCCACCTTGGGACAGCACA...AAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | CTTCCTCAGCAGGTGCATTATCTCCGACTACCAGCATCACTGGGCAGCGGAGTGTGTGCTGTCCCAAGGTaGATCCCCTCATTTCTTTTT | + |
Preference number: 2 (lower is better) Translates to: LPQQVHYLRLPASLGSGVCAVPR*IPSFLF Trigger: AAAAAGAAATGAGGGGATCCACCTTGGGACAGCACA...CACTCCGCTGCCCAGTGATGCTGGTAGTCGGAGATAATGCACCTGCTGAGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGTTGTCTGTGACACACTaGCCCAAGTTGACCAGGGCA | + |
Preference number: 2 (lower is better) Translates to: SFSSLPTIFKPHICQIQGLSVTH*PKLTRA Trigger: TGCCCTGGTCAACTTGGGCCAGTGTGTCACAGACAA...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | TGGTTGTGTCACCTGAGGAAGACCACCAGAATCTGCCATCTTCAGGAAGGTCGTTTCACCAGCTCCTCCTaGCTGAAGAGATGGGAGAGT | + |
Preference number: 2 (lower is better) Translates to: WLCHLRKTTRICHLQEGRFTSSS*LKRWES Trigger: ACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAA...ACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTTCCTCAGGTGACACAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGAAACTAAAGGGAAGATaGGCCGGTGCAGAGATGGCA | + |
Preference number: 2 (lower is better) Translates to: SFSSLPTIFKPHICQIQGKLKGR*AGAEMA Trigger: TGCCATCTCTGCACCGGCTCATCTTCCCTTTAGTTT...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | TTGATGCAAGGGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGAAACTAAAGGGAAGATaGGCCGGTGCAGAGATGGCA | + |
Preference number: 2 (lower is better) Translates to: LMQGLQERDTLKVQGCPLKLKGR*AGAEMA Trigger: TGCCATCTCTGCACCGGCTCATCTTCCCTTTAGTTT...CAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACCCTTGCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | TGGAACCTTTGTTTGAGGATGGCCCATTTCCCACCCAAGGGCCAGGCAATCTCCTTGACCAGGGCACTGTaGCAAATACTTGGTGAAATC | + |
Preference number: 2 (lower is better) Translates to: WNLCLRMAHFPPKGQAISLTRAL*QILGEI Trigger: GATTTCACCAAGTATTTGTCACAGTGCCCTGGTCAA...GGAGATTGCCTGGCCCTTGGGTGGGAAATGGGCCATCCTCAAACAAAGGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR GCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTGGGAAGATGAGCCGGTaGAGAGATGGCAGTGGGACC | + |
Preference number: 2 (lower is better) Translates to: GISSTTSKQSHSVFTEARGKMSR*RDGSGT Trigger: GGTCCCACTGCCATCTCTGCACCGGCTCATCTTCCC...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR GCA 90 bp | GAGACAGGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTATGTGGGTGTCCTCTTaGCTCAGAACACCCATACAA | + |
Preference number: 2 (lower is better) Translates to: ETGVCKASPSHHLRLLCCMWVSS*LRTPIQ Trigger: TTGTATGGGTGTTCTGAGGCAAGAGGACACCCACAT...ACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCCTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | GAATCTGCCATCTTCAGGAAGGTCGTAGTGGTTGGGTCCAGTTTGGAGTTACACTTCACCAGCTCCTCCTaGCTGAAGAGATGGGAGAGT | + |
Preference number: 2 (lower is better) Translates to: ESAIFRKVVVVGSSLELHFTSSS*LKRWES Trigger: ACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAA...GTGTAACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGCAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTGGAGTGTCTTGGCATTaGGCACCGTCCCAGGTCGGT | + |
Preference number: 2 (lower is better) Translates to: GISSTTSKQSHSVFTEARGVSWH*APSQVG Trigger: ACCGACCTGGGACGGTGCCCAATGCCAAGACACTCC...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | AAGAGAAGACAACTACCAATGGGAAACCACATACAGGAAGGAGGACCTGATATAGGGGAGGGGCCACACTaGGTGAGACAGGAGTGTGTA | + |
Preference number: 2 (lower is better) Translates to: KRRQLPMGNHIQEGGPDIGEGPH*VRQECV Trigger: TACACACTCCTGTCTCACTCAGTGTGGCCCCTCCCC...TATATCAGGTCCTCCTTCCTGTATGTGGTTTCCCATTGGTAGTTGTCTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | TCTCTGGGGATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGTGGCTACCATCCTCATaGCTGTCACTTCTACTATTA | + |
Preference number: 2 (lower is better) Translates to: SLGMRADETNGQAVSAYLWLPSS*LSLLLL Trigger: TAATAGTAGAAGTGACAGTCATGAGGATGGTAGCCA...CAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | CAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAAGGGGATGAGAGCAGATaGAACCAATGGCCAGGCTGT | + |
Preference number: 2 (lower is better) Translates to: QSRNGLQLQKGAACATDKGDESR*NQWPGC Trigger: ACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCC...TTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR GCA 90 bp | GAATCTGCCATCTTCAGGAAGGTCGTAGTGGTTGGGTCCAGTTTGGAGTTACACCAGTGTCTGGTAAAGTaGTGGTCAAGCCAGAGAGCT | + |
Preference number: 2 (lower is better) Translates to: ESAIFRKVVVVGSSLELHQCLVK*WSSQRA Trigger: AGCTCTCTGGCTTGACCAGCACTTTACCAGACACTG...GTGTAACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGCAGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | ATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACTTGTGCTGTCCCAAGGTaGATCCCCTCATTTCTTTTT | + |
Preference number: 2 (lower is better) Translates to: MAVCLERPLVATILMTVTCAVPR*IPSFLF Trigger: AAAAAGAAATGAGGGGATCCACCTTGGGACAGCACA...AGTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | AAGAGAAGACAACTACCAATGGGAAACCACATACAGGAAGGAGGACCTGATATAGACAAGGCCCTGTGGTaGCAGGGTATGGGGGTTCCT | + |
Preference number: 2 (lower is better) Translates to: KRRQLPMGNHIQEGGPDIDKALW*QGMGVP Trigger: AGGAACCCCCATACCCTGCCACCACAGGGCCTTGTC...TATATCAGGTCCTCCTTCCTGTATGTGGTTTCCCATTGGTAGTTGTCTTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGTGTGCCACAGATAAATaGATGTGGGTGTCCTCTTGC | + |
Preference number: 2 (lower is better) Translates to: SFSSLPTIFKPHICQIQGCATDK*MWVSSC Trigger: GCAAGAGGACACCCACATCCATTTATCTGTGGCACA...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | TGGAACCTTTGTTTGAGGATGGCCCATTTCCCACCCAAGGGCCAGGCAATCTCCGAAGACAACTACCAATaGGAAACCACATACAGGAAG | + |
Preference number: 2 (lower is better) Translates to: WNLCLRMAHFPPKGQAISEDNYQ*ETTYRK Trigger: CTTCCTGTATGTGGTTTCCCATTGGTAGTTGTCTTC...GGAGATTGCCTGGCCCTTGGGTGGGAAATGGGCCATCCTCAAACAAAGGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTGACTACCAGCATCACTaGGCAGCGGAGTGTCTTGGC | + |
Preference number: 2 (lower is better) Translates to: GISSTTSKQSHSVFTEARDYQHH*AAECLG Trigger: GCCAAGACACTCCGCTGCCCAGTGATGCTGGTAGTC...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | AAGAGAAGACAACTACCAATGGGAAACCACATACAGGAAGGAGGACCTGATATAGACACCTCCATGGTGTaGTTGACCTGGCCCATCCCC | + |
Preference number: 2 (lower is better) Translates to: KRRQLPMGNHIQEGGPDIDTSMV*LTWPIP Trigger: GGGGATGGGCCAGGTCAACCACACCATGGAGGTGTC...TATATCAGGTCCTCCTTCCTGTATGTGGTTTCCCATTGGTAGTTGTCTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | TCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTCTAAACGGGGAGGGGCCACACTaGGTGAGACAGGAGTGTGTA | + |
Preference number: 2 (lower is better) Translates to: SNTWSAIYSKGLVLPPLNGEGPH*VRQECV Trigger: TACACACTCCTGTCTCACTCAGTGTGGCCCCTCCCC...GTTTAGAGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | TCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTCTAAACGGCTGCCCACTGGTCTaGCTCCCACTCACATCAGAG | + |
Preference number: 2 (lower is better) Translates to: SNTWSAIYSKGLVLPPLNGCPLV*LPLTSE Trigger: CTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCC...GTTTAGAGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | AAGATGTCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTTGGGACAAGGCCCTGTaGTGGCAGGGTATGGGGGTT | + |
Preference number: 2 (lower is better) Translates to: KMSNTWSAIYSKGLVLPPWDKAL*WQGMGV Trigger: AACCCCCATACCCTGCCACCACAGGGCCTTGTCCCA...AGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGACATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTCAGCTTCCAAAGGGATaGGTAATCATGAAGTTCTCA | + |
Preference number: 2 (lower is better) Translates to: GNLQPLQQAEVIVSSHLCQLPKG*VIMKFS Trigger: TGAGAACTTCATGATTACCCATCCCTTTGGAAGCTG...ACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GAGACAGGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTCAGCTTCCAAAGGGATaGGTAATCATGAAGTTCTCA | + |
Preference number: 2 (lower is better) Translates to: ETGVCKASPSHHLRLLCCQLPKG*VIMKFS Trigger: TGAGAACTTCATGATTACCCATCCCTTTGGAAGCTG...ACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCCTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | ATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAATGGATGTGGGGAAGGTCGTAGTGGTTaGGTCCAGTTTGGAGTTACA | + |
Preference number: 2 (lower is better) Translates to: MAYSYRKGRHVPQINGCGEGRSG*VQFGVT Trigger: TGTAACTCCAAACTGGACCCAACCACTACGACCTTC...CCCACATCCATTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | ATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTCTTTTTGACCAGGGCACTGTaGCAAATACTTGGTGAAATC | + |
Preference number: 2 (lower is better) Translates to: ISSPSSKQRSLYLPICVFLTRAL*QILGEI Trigger: GATTTCACCAAGTATTTGTCACAGTGCCCTGGTCAA...AAAGACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTTTACACCACCTGTCCTaGCCAGAGAGCACCAGGAAA | + |
Preference number: 2 (lower is better) Translates to: GISSTTSKQSHSVFTEARLHHLS*PESTRK Trigger: TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAA...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | ACTGGACTCCAGAGCAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATCAACATTTTAACCTCTaGCAACAGGGACAAGAGACC | + |
Preference number: 2 (lower is better) Translates to: TGLQSSLEMAYSYRKGRHQHFNL*QQGQET Trigger: GGTCTCTTGTCCCTGTTGGCAGAGGTTAAAATGTTG...ATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTGCTCTGGAGTCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | ATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTCTTTCAACATTTTAACCTCTaGCAACAGGGACAAGAGACC | + |
Preference number: 2 (lower is better) Translates to: ISSPSSKQRSLYLPICVFQHFNL*QQGQET Trigger: GGTCTCTTGTCCCTGTTGGCAGAGGTTAAAATGTTG...AAAGACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | CATCTGTGTCTTTCTAACAAGCTCACTTCTCAAGTATTGTCTGTGACACACTGGGGGACCTACAGTACCTaGCAGCTTCCAAAGGGATGG | + |
Preference number: 2 (lower is better) Translates to: HLCLSNKLTSQVLSVTHWGTYST*QLPKGW Trigger: CCATCCCTTTGGAAGCTGGCAGGTACTGTAGGTCCC...CCAGTGTGTCACAGACAATACTTGAGAAGTGAGCTTGTTAGAAAGACACAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTATCCAGGGGCTGGGCTaGGCTTTCTTCAGTACTGTA | + |
Preference number: 2 (lower is better) Translates to: GISSTTSKQSHSVFTEARIQGLG*AFFSTV Trigger: TACAGTACTGAAGAAAGCCCAGCCCAGCCCCTGGAT...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | TTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGCAGCTTCCAAAGGGATaGGTAATCATGAAGTTCTCA | + |
Preference number: 2 (lower is better) Translates to: FSSLPTIFKPHICQIQGLQLPKG*VIMKFS Trigger: TGAGAACTTCATGATTACCCATCCCTTTGGAAGCTG...CAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | ACAGATAAATGGATGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACTCCTGGCTGAAGAGATaGGAGAGTACAGTGTCTGGT | + |
Preference number: 2 (lower is better) Translates to: TDKWMWVSSCLRTPIQYHSWLKR*ESTVSG Trigger: ACCAGACACTGTACTCTCCCATCTCTTCAGCCAGGA...GTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR-3UTR TCA 90 bp | GATATCTTAAGAACACAGCAAAAAGATGTCCAATACTTGGAGTGCTATCTACAGGGCTGCCCACTGGTCTaGCTCCCACTCACATCAGAG | + |
Preference number: 2 (lower is better) Translates to: DILRTQQKDVQYLECYLQGCPLV*LPLTSE Trigger: CTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCC...CTGTAGATAGCACTCCAAGTATTGGACATCTTTTTGCTGTGTTCTTAAGATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | CATCTGTGTCTTTCTAACAAGCTCACTTCTCAAGTATTGTCTGTGACACACTGGTTACACCACCTGTCCTaGCCAGAGAGCACCAGGAAA | + |
Preference number: 2 (lower is better) Translates to: HLCLSNKLTSQVLSVTHWLHHLS*PESTRK Trigger: TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAA...CCAGTGTGTCACAGACAATACTTGAGAAGTGAGCTTGTTAGAAAGACACAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR GCA 90 bp | TCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTCTAAACGGGACCTACAGTACCTaGCAGCTTCCAAAGGGATGG | + |
Preference number: 2 (lower is better) Translates to: SNTWSAIYSKGLVLPPLNGTYST*QLPKGW Trigger: CCATCCCTTTGGAAGCTGGCAGGTACTGTAGGTCCC...GTTTAGAGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CCA 90 bp | CAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAATGTGCCACAGATAAATaGATGTGGGTGTCCTCTTGC | + |
Preference number: 2 (lower is better) Translates to: QSRNGLQLQKGAACATDKCATDK*MWVSSC Trigger: GCAAGAGGACACCCACATCCATTTATCTGTGGCACA...TTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR TCA 90 bp | ACAGATAAATGGATGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACTGGCTACCATCCTCATaGCTGTCACTTCTACTATTA | + |
Preference number: 2 (lower is better) Translates to: TDKWMWVSSCLRTPIQYHWLPSS*LSLLLL Trigger: TAATAGTAGAAGTGACAGTCATGAGGATGGTAGCCA...GTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTTATTCAAGACCAGCCTaGGCTACAGAAAGATTGCTC | + |
Preference number: 2 (lower is better) Translates to: GISSTTSKQSHSVFTEARYSRPA*ATERLL Trigger: GAGCAATCTTTCTGTAGCCCAGGCTGGTCTTGAATA...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073139.14 |
||
3UTR TCA 72 bp | CCCATCCCCTCACTGCTGTCTGAGTGGGCGCAGGGCTaGGGGCGGCTGCCGTCCACGGAACTGGCGCTGGTG | + |
Preference number: 3 (lower is better) Translates to: PIPSLLSEWAQG*GRLPSTELALV Trigger: CACCAGCGCCAGTTCCGTGGACGGCAGCCGCCCTCAGCCCTGCGCCCACTCAGACAGCAGTGAGGGGATGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR CCA 72 bp | GTGACCTTTGCCTCAGGGTGGGACAAGGCCCTGTGGTaGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGG | + |
Preference number: 3 (lower is better) Translates to: VTFASGWDKALW*QGMGVPAPMSG Trigger: CCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGGCCTTGTCCCACCCTGAGGCAAAGGTCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR CCA 72 bp | GTACCACACTCGGGAGCATGGCGGCCAGCTGCTCCATaGAGGGGAACTGGTACCCCTGAGGGAACTGTGACG | + |
Preference number: 3 (lower is better) Translates to: VPHSGAWRPAAP*RGTGTPEGTVT Trigger: CGTCACAGTTCCCTCAGGGGTACCAGTTCCCCTCCATGGAGCAGCTGGCCGCCATGCTCCCGAGTGTGGTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
||
3UTR GCA 72 bp | ACCTCTGCCAACAGGGACAAGAGACCAGGTGACCTTTaGCTCAGGGTGGGACAAGGCCCTGTGGTGGCAGGG | + |
Preference number: 3 (lower is better) Translates to: TSANRDKRPGDL*LRVGQGPVVAG Trigger: CCCTGCCACCACAGGGCCTTGTCCCACCCTGAGGCAAAGGTCACCTGGTCTCTTGTCCCTGTTGGCAGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CAA 90 bp | AGTACAGTGTCTGGTAAAGTGCTGGTCAAGCCAGAGAGCTTGGTGGCAGCCCAGGGGCAGCGGAGTGTCTaGGCATTGGGCACCGTCCCA | + |
Preference number: 3 (lower is better) Translates to: STVSGKVLVKPESLVAAQGQRSV*ALGTVP Trigger: TGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCC...CTGGGCTGCCACCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACACTGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR GCA 72 bp | CTGGGAACAAGGAGCCAGCACCCCTTCCTCAGCAGGTaGATTATCTCCGACTACCAGCATCACTGGGCAGCG | + |
Preference number: 3 (lower is better) Translates to: LGTRSQHPFLSR*IISDYQHHWAA Trigger: CGCTGCCCAGTGATGCTGGTAGTCGGAGATAATGCACCTGCTGAGGAAGGGGTGCTGGCTCCTTGTTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
||
3UTR-3UTR CAA 90 bp | CCCTGGTTGTGTCACCTGAGGAAGACCACCAGAATCTGCCATCTTCAGGAAGGTGGGCAGCGGAGTGTCTaGGCATTGGGCACCGTCCCA | + |
Preference number: 3 (lower is better) Translates to: PWLCHLRKTTRICHLQEGGQRSV*ALGTVP Trigger: TGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCC...ACCTTCCTGAAGATGGCAGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CAA 90 bp | AGCATCACTGGGCAGCGGAGTGTCTTGGCATTGGGCACCGTCCCAGGTCGGTTAAGGTCTCTGCGGCTGTaGTACATGTTCCAGAAGAGC | + |
Preference number: 3 (lower is better) Translates to: SITGQRSVLALGTVPGRLRSLRL*YMFQKS Trigger: GCTCTTCTGGAACATGTACAACAGCCGCAGAGACCT...TAACCGACCTGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCCAGTGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR CCA 72 bp | CCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTaGCCTTACACCACCTGTCCTGCCCAGAGAGCACCA | + |
Preference number: 3 (lower is better) Translates to: PHVRVLHILQPG*PYTTCPAQRAP Trigger: TGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR TCA 72 bp | ATCAGCGCCCTGGGGCAGCCAGGCAGCCTAAACAGTTaGGCCTTCCCTGTGATAGGAAACACGACACACGTA | + |
Preference number: 3 (lower is better) Translates to: ISALGQPGSLNS*AFPVIGNTTHV Trigger: TACGTGTGTCGTGTTTCCTATCACAGGGAAGGCTCAACTGTTTAGGCTGCCTGGCTGCCCCAGGGCGCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073139.14 |
||
3UTR-3UTR CAA 90 bp | CAGCGGAGTGTCTTGGCATTGGGCACCGTCCCAGGTCGGTTAATATCAAGGTCTAGTCAGCTTCCCTGGTaGTGTCACCTGAGGAAGACC | + |
Preference number: 3 (lower is better) Translates to: QRSVLALGTVPGRLISRSSQLPW*CHLRKT Trigger: GGTCTTCCTCAGGTGACACAACCAGGGAAGCTGACT...AGACCTTGATATTAACCGACCTGGGACGGTGCCCAATGCCAAGACACTCCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR TCA 72 bp | CATTTTAACCTCTGCCAACAGGGACAAGAGACCAGGTaGCCTTTGCCTCAGGGTGGGACAAGGCCCTGTGGT | + |
Preference number: 3 (lower is better) Translates to: HFNLCQQGQETR*PLPQGGTRPCG Trigger: ACCACAGGGCCTTGTCCCACCCTGAGGCAAAGGTCACCTGGTCTCTTGTCCCTGTTGGCAGAGGTTAAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR GCA 72 bp | CCCTGGTTGTGTCACCTGAGGAAGACCACCAGAATCTaGCATCTTCAGGAAGGTCGTAGTGGTTGGGTCCAG | + |
Preference number: 3 (lower is better) Translates to: PWLCHLRKTTRI*HLQEGRSGWVQ Trigger: CTGGACCCAACCACTACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR CCA 72 bp | TGCGGCTGTTGTACATGTTCCAGAAGAGCTGCAGGTTaGCCTGGTTCACCACGTTTGAGATCTGCTGCCGGT | + |
Preference number: 3 (lower is better) Translates to: CGCCTCSRRAAG*PGSPRLRSAAG Trigger: ACCGGCAGCAGATCTCAAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACATGTACAACAGCCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR TCA 72 bp | ATAGTTGTGGGCTGTAGGAGGCATGGAACCTTTGTTTaGGGATGGCCCATTTCCCACCCAAGGGCCAGGCAA | + |
Preference number: 3 (lower is better) Translates to: IVVGCRRHGTFV*GWPISHPRARQ Trigger: TTGCCTGGCCCTTGGGTGGGAAATGGGCCATCCTCAAACAAAGGTTCCATGCCTCCTACAGCCCACAACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR GCA 72 bp | AGGTCTCTGCGGCTGTTGTACATGTTCCAGAAGAGCTaGAGGTTGGCCTGGTTCACCACGTTTGAGATCTGC | + |
Preference number: 3 (lower is better) Translates to: RSLRLLYMFQKS*RLAWFTTFEIC Trigger: GCAGATCTCAAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACATGTACAACAGCCGCAGAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR GCA 72 bp | TTTGGAGTTACACTCAACCACCCCTTCCTCAGCAGGTaGATTATCTCCGACTACCAGCATCACTGGGCAGCG | + |
Preference number: 3 (lower is better) Translates to: FGVTLNHPFLSR*IISDYQHHWAA Trigger: CGCTGCCCAGTGATGCTGGTAGTCGGAGATAATGCACCTGCTGAGGAAGGGGTGGTTGAGTGTAACTCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
||
3UTR CCA 72 bp | CTCTGCACCAGCTCCGTGTTGTTCACCAGCTCCTCCTaGCTGAAGAGATGGGAGAGTACAGTGTCTGGTAAA | + |
Preference number: 3 (lower is better) Translates to: LCTSSVLFTSSS*LKRWESTVSGK Trigger: TTTACCAGACACTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAACAACACGGAGCTGGTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CAA 90 bp | GTGTTGTTCACCAGCTCCTCCTGGCTGAAGAGATGGGAGAGTACAGTGTCTGGTAGGTCTCTGCGGCTGTaGTACATGTTCCAGAAGAGC | + |
Preference number: 3 (lower is better) Translates to: VLFTSSSWLKRWESTVSGRSLRL*YMFQKS Trigger: GCTCTTCTGGAACATGTACAACAGCCGCAGAGACCT...ACCAGACACTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAACAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR TCA 72 bp | GCCCAAGTTGACCAGGGCACTGTGACAAATACTTGGTaGAATCTGGGACAAGAGGGACCTACAGTACCTGCC | + |
Preference number: 3 (lower is better) Translates to: AQVDQGTVTNTW*NLGQEGPTVPA Trigger: GGCAGGTACTGTAGGTCCCTCTTGTCCCAGATTTCACCAAGTATTTGTCACAGTGCCCTGGTCAACTTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR TCA 72 bp | TTAGTGCTTTCTCTCCTCTCTGGGGATGAGAGCAGATaGAACCAATGGCCAGGCTGTGAGCGCCTACTTGGT | + |
Preference number: 3 (lower is better) Translates to: LVLSLLSGDESR*NQWPGCERLLG Trigger: ACCAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCCAGAGAGGAGAGAAAGCACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
||
3UTR GCA 72 bp | TGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTaGTGTGCTGTCCCAAGGTGGATCCCCTCATTTCTT | + |
Preference number: 3 (lower is better) Translates to: CKASPSHHLRLL*CAVPRWIPSFL Trigger: AAGAAATGAGGGGATCCACCTTGGGACAGCACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR GCA 72 bp | TTTAGCTCACTACCCACCATCTTCAAACCTCACATCTaGCAGATCCAGGGGCTGGGCTGGGCTTTCTTCAGT | + |
Preference number: 3 (lower is better) Translates to: FSSLPTIFKPHI*QIQGLGWAFFS Trigger: ACTGAAGAAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR CCA 72 bp | AGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTaGTCTGACTCCCACTCACATCAGAGCTTTAGCTCA | + |
Preference number: 3 (lower is better) Translates to: RKGTLLRSKAAH*SDSHSHQSFSS Trigger: TGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
||
3UTR CCA 72 bp | AGAGGGACCTACAGTACCTGCCAGCTTCCAAAGGGATaGGTAATCATGAAGTTCTCAGGGGCTACACACAGC | + |
Preference number: 3 (lower is better) Translates to: RGTYSTCQLPKG*VIMKFSGATHS Trigger: GCTGTGTGTAGCCCCTGAGAACTTCATGATTACCCATCCCTTTGGAAGCTGGCAGGTACTGTAGGTCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR CCA 72 bp | TCCGTGTTGTTCACCAGCTCCTCCTGGCTGAAGAGATaGGAGAGTACAGTGTCTGGTAAAGTGCTGGTCAAG | + |
Preference number: 3 (lower is better) Translates to: SVLFTSSSWLKR*ESTVSGKVLVK Trigger: CTTGACCAGCACTTTACCAGACACTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAACAACACGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CAA 90 bp | CCCTGGTTGTGTCACCTGAGGAAGACCACCAGAATCTGCCATCTTCAGGAAGGTATCCAGCCTTTGCCGTaGGGGTCAATGTTCATCAAC | + |
Preference number: 3 (lower is better) Translates to: PWLCHLRKTTRICHLQEGIQPLP*GSMFIN Trigger: GTTGATGAACATTGACCCCAACGGCAAAGGCTGGAT...ACCTTCCTGAAGATGGCAGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
||
3UTR-3UTR CAA 90 bp | CCCAAGGGCCAGGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCACTGTGACAAATACTaGGTGAAATCTGGGACAAGA | + |
Preference number: 3 (lower is better) Translates to: PKGQAISSPSSKQRSLYLHCDKY*VKSGTR Trigger: TCTTGTCCCAGATTTCACCAAGTATTTGTCACAGTG...AAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCCTGGCCCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CAA 90 bp | TGGTTGTGTCACCTGAGGAAGACCACCAGAATCTGCCATCTTCAGGAAGGTCGTATCCAGCCTTTGCCGTaGGGGTCAATGTTCATCAAC | + |
Preference number: 3 (lower is better) Translates to: WLCHLRKTTRICHLQEGRIQPLP*GSMFIN Trigger: GTTGATGAACATTGACCCCAACGGCAAAGGCTGGAT...ACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTTCCTCAGGTGACACAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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3UTR CCA 72 bp | TTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTaGGCTTTCTTCAGTACTGTATCTAACTATCCTGGC | + |
Preference number: 3 (lower is better) Translates to: FKPHICQIQGLG*AFFSTVSNYPG Trigger: GCCAGGATAGTTAGATACAGTACTGAAGAAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR CCA 72 bp | CAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAATaGATGTGGGTGTCCTCTTGCCTCAGAACACCCATA | + |
Preference number: 3 (lower is better) Translates to: QLQKGAACATDK*MWVSSCLRTPI Trigger: TATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR CCA 72 bp | ACCAGAATCTGCCATCTTCAGGAAGGTCGTAGTGGTTaGGTCCAGTTTGGAGTTACACTCAACCACCCCTTC | + |
Preference number: 3 (lower is better) Translates to: TRICHLQEGRSG*VQFGVTLNHPF Trigger: GAAGGGGTGGTTGAGTGTAACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGCAGATTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR CCA 72 bp | CCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTaGGCTGGGCTTTCTTCAGTACTGTATCTAACTATC | + |
Preference number: 3 (lower is better) Translates to: PSSNLTSARSRG*AGLSSVLYLTI Trigger: GATAGTTAGATACAGTACTGAAGAAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR CCA 72 bp | ACCAGAATCTGCCATCTTCAGGAAGGTCGTAGTGGTTaGGTCCAGTTTGGAGTTACACTCAACCTGGGAACA | + |
Preference number: 3 (lower is better) Translates to: TRICHLQEGRSG*VQFGVTLNLGT Trigger: TGTTCCCAGGTTGAGTGTAACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGCAGATTCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
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3UTR-3UTR CAA 90 bp | GAGACAGGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTCACTGTGACAAATACTaGGTGAAATCTGGGACAAGA | + |
Preference number: 3 (lower is better) Translates to: ETGVCKASPSHHLRLLCCHCDKY*VKSGTR Trigger: TCTTGTCCCAGATTTCACCAAGTATTTGTCACAGTG...ACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCCTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR TCA 72 bp | AAACAGTCACATTCAGTATTCACGGAAGCACGTGAGTaGACTGAACCGGGGATAGGAAACACTCCACTGGAC | + |
Preference number: 3 (lower is better) Translates to: KQSHSVFTEARE*TEPGIGNTPLD Trigger: GTCCAGTGGAGTGTTTCCTATCCCCGGTTCAGTTCACTCACGTGCTTCCGTGAATACTGAATGTGACTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CAA 90 bp | TCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTCTAAACCTCACTTCTCAAGTATaGTCTGTGACACACTGGCCC | + |
Preference number: 3 (lower is better) Translates to: SNTWSAIYSKGLVLPPLNLTSQV*SVTHWP Trigger: GGGCCAGTGTGTCACAGACAATACTTGAGAAGTGAG...GTTTAGAGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CAA 90 bp | CATCTGTGTCTTTCTAACAAGCTCACTTCTCAAGTATTGTCTGTGACACACTGGCACTGTGACAAATACTaGGTGAAATCTGGGACAAGA | + |
Preference number: 3 (lower is better) Translates to: HLCLSNKLTSQVLSVTHWHCDKY*VKSGTR Trigger: TCTTGTCCCAGATTTCACCAAGTATTTGTCACAGTG...CCAGTGTGTCACAGACAATACTTGAGAAGTGAGCTTGTTAGAAAGACACAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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3UTR-3UTR CAA 90 bp | TCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTCTAAACCACTGTGACAAATACTaGGTGAAATCTGGGACAAGA | + |
Preference number: 3 (lower is better) Translates to: SNTWSAIYSKGLVLPPLNHCDKY*VKSGTR Trigger: TCTTGTCCCAGATTTCACCAAGTATTTGTCACAGTG...GTTTAGAGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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CDS-3UTR TCA 90 bp | CACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGCTGTCTGTCTAGAGCGCCCTGAGTGGGCGCAGGGCTaGGGGCGGCTGCCGTCCACG | + |
Preference number: 4 (lower is better) Translates to: HLSCPESTRKMAVCLERPEWAQG*GRLPST Trigger: CGTGGACGGCAGCCGCCCTCAGCCCTGCGCCCACTC...AGGGCGCTCTAGACAGACAGCCATTTTCCTGGTGCTCTCTGGGCAGGACAGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR TCA 90 bp | GGTCCAAGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACGAGTGGGCGCAGGGCTaGGGGCGGCTGCCGTCCACG | + |
Preference number: 4 (lower is better) Translates to: GPRLPTGLTPTHIRALAHEWAQG*GRLPST Trigger: CGTGGACGGCAGCCGCCCTCAGCCCTGCGCCCACTC...GTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCTTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR TCA 90 bp | CCCAAGGGCCAGGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTGAGTGGGCGCAGGGCTaGGGGCGGCTGCCGTCCACG | + |
Preference number: 4 (lower is better) Translates to: PKGQAISSPSSKQRSLYLEWAQG*GRLPST Trigger: CGTGGACGGCAGCCGCCCTCAGCCCTGCGCCCACTC...AAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCCTGGCCCTTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR CCA 90 bp | AGGCCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCACCACACTCGGGAGCATaGCGGCCAGCTGCTCCATGG | + |
Preference number: 4 (lower is better) Translates to: RPCGGRVWGFLPPCQGSPPHSGA*RPAAPW Trigger: CCATGGAGCAGCTGGCCGCCATGCTCCCGAGTGTGG...TGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR CCA 90 bp | CCAGCATCACTGGGCAGCGGAGTGTCTTGGCATTGGGCACCGTCCCAGGTCGGTCCACACTCGGGAGCATaGCGGCCAGCTGCTCCATGG | + |
Preference number: 4 (lower is better) Translates to: PASLGSGVSWHWAPSQVGPHSGA*RPAAPW Trigger: CCATGGAGCAGCTGGCCGCCATGCTCCCGAGTGTGG...ACCGACCTGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCCAGTGATGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
||
CDS-3UTR TCA 90 bp | GGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGGTCTGACTCCGAGTGGGCGCAGGGCTaGGGGCGGCTGCCGTCCACG | + |
Preference number: 4 (lower is better) Translates to: GYRKGTLLRSKAAHWSDSEWAQG*GRLPST Trigger: CGTGGACGGCAGCCGCCCTCAGCCCTGCGCCCACTC...GGAGTCAGACCAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
||
CDS-3UTR GCA 90 bp | GGCCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATGTGCGAGGCGGGTCATaGTGGCTGAGGGCATGTAGC | + |
Preference number: 4 (lower is better) Translates to: GPVVAGYGGSCPHVRVLHVRGGS*WLRACS Trigger: GCTACATGCCCTCAGCCAGCATGACCCGCCTCGCAC...ATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080666.8 |
||
CDS-3UTR TCA 90 bp | CCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATATGCGGGTCATGCTGGCTaGGGGCATGTAGCCCATGCC | + |
Preference number: 4 (lower is better) Translates to: PCGGRVWGFLPPCQGSPYAGHAG*GHVAHA Trigger: GGCATGGGCTACATGCCCTCAGCCAGCATGACCCGC...ATATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080666.8 |
||
CDS-3UTR TCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGCGGGTCATGCTGGCTaGGGGCACTGCTCCTCCACT | + |
Preference number: 4 (lower is better) Translates to: SAWLALHHLSCPESTRKMAGHAG*GHCSST Trigger: AGTGGAGGAGCAGTGCCCTCAGCCAGCATGACCCGC...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000162578.8 |
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CDS-3UTR GCA 90 bp | CACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGCTGTCTGTCTAGAGCGCCCTGTGCGAGGCGGGTCATaGTGGCTGAGGGCACTGCTC | + |
Preference number: 4 (lower is better) Translates to: HLSCPESTRKMAVCLERPVRGGS*WLRALL Trigger: GAGCAGTGCCCTCAGCCAGCATGACCCGCCTCGCAC...AGGGCGCTCTAGACAGACAGCCATTTTCCTGGTGCTCTCTGGGCAGGACAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000162578.8 |
||
CDS-3UTR CCA 90 bp | TCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAACCACACTCGGGAGCATaGCGGCCAGCTGCTCCATGG | + |
Preference number: 4 (lower is better) Translates to: SSAWLALHHLSCPESTRKPHSGA*RPAAPW Trigger: CCATGGAGCAGCTGGCCGCCATGCTCCCGAGTGTGG...TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | CCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATATCCACATCATGGTAGGTaGGGATGGCTGGGCGGTTCC | + |
Preference number: 4 (lower is better) Translates to: PCGGRVWGFLPPCQGSPYPHHGR*GWLGGS Trigger: GGAACCGCCCAGCCATCCTCACCTACCATGATGTGG...ATATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | AGTACAGTGTCTGGTAAAGTGCTGGTCAAGCCAGAGAGCTTGGTGGCAGCCCAGCCCCTGAGGGAACTGTaGCGCTCCCACCTGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: STVSGKVLVKPESLVAAQPLREL*RSHLLP Trigger: GGGCAGCAGGTGGGAGCGTCACAGTTCCCTCAGGGG...CTGGGCTGCCACCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACACTGTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
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CDS-3UTR TCA 90 bp | CACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGCTGTCTGTCTAGAGCGCCCTCCTCCATGGTGTGGTTaGCCTGGCCCATCCCCTCAC | + |
Preference number: 4 (lower is better) Translates to: HLSCPESTRKMAVCLERPPPWCG*PGPSPH Trigger: GTGAGGGGATGGGCCAGGTCAACCACACCATGGAGG...AGGGCGCTCTAGACAGACAGCCATTTTCCTGGTGCTCTCTGGGCAGGACAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR GCA 90 bp | GCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTGGCCTTACACCACCTGTGCGAGGCGGGTCATaGTGGCTGAGGGCACTGCTC | + |
Preference number: 4 (lower is better) Translates to: APMSGFSIFFSLAGLTPPVRGGS*WLRALL Trigger: GAGCAGTGCCCTCAGCCAGCATGACCCGCCTCGCAC...AGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 |
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CDS-3UTR CCA 90 bp | CCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATATGGAGTGTCTTGGCATTaGGCACCGTCCCAGGTCGGT | + |
Preference number: 4 (lower is better) Translates to: PCGGRVWGFLPPCQGSPYGVSWH*APSQVG Trigger: ACCGACCTGGGACGGTGCCCAATGCCAAGACACTCC...ATATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGGCAGCGGAGTGTCTTaGCATTGGGCACCGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: SAWLALHHLSCPESTRKMGSGVS*HWAPSQ Trigger: CTGGGACGGTGCCCAATGCCAAGACACTCCGCTGCC...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | CCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATATGACACCTCCATGGTGTaGTTGACCTGGCCCATCCCC | + |
Preference number: 4 (lower is better) Translates to: PCGGRVWGFLPPCQGSPYDTSMV*LTWPIP Trigger: GGGGATGGGCCAGGTCAACCACACCATGGAGGTGTC...ATATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | GAGACAGGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTCCCCTGAGGGAACTGTaGCGCTCCCACCTGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: ETGVCKASPSHHLRLLCCPLREL*RSHLLP Trigger: GGGCAGCAGGTGGGAGCGTCACAGTTCCCTCAGGGG...ACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCCTGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | CCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATATCCAGCTCCTCCTGGCTaGAGAGATGGGAGAGTACAG | + |
Preference number: 4 (lower is better) Translates to: PCGGRVWGFLPPCQGSPYPAPPG*RDGRVQ Trigger: CTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGG...ATATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | ACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTGGGCTTTCCTCCATGGTGTGGTTaGCCTGGCCCATCCCCTCAC | + |
Preference number: 4 (lower is better) Translates to: THHLQTSHLPDPGAGLGFPPWCG*PGPSPH Trigger: GTGAGGGGATGGGCCAGGTCAACCACACCATGGAGG...AAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR GCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGGAAATCGCAGCTCCTaGAGCCCTGCCATGGTCACG | + |
Preference number: 4 (lower is better) Translates to: SAWLALHHLSCPESTRKMGNRSS*SPAMVT Trigger: CGTGACCATGGCAGGGCTGCAGGAGCTGCGATTTCC...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR GCA 90 bp | ACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTGGGCTTTAGCATGGCGGCCAGCTaGTCCATGGAGGGGAACTGG | + |
Preference number: 4 (lower is better) Translates to: THHLQTSHLPDPGAGLGFSMAAS*SMEGNW Trigger: CCAGTTCCCCTCCATGGAGCAGCTGGCCGCCATGCT...AAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGCCATGGTCACGTCGTaGAGCAGAAGCCCTGTCAGC | + |
Preference number: 4 (lower is better) Translates to: SAWLALHHLSCPESTRKMAMVTS*SRSPVS Trigger: GCTGACAGGGCTTCTGCTCCACGACGTGACCATGGC...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR CCA 90 bp | CCCAAGGGCCAGGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCGGCCAGCTGCTCCATaGAGGGGAACTGGTACCCCT | + |
Preference number: 4 (lower is better) Translates to: PKGQAISSPSSKQRSLYLRPAAP*RGTGTP Trigger: AGGGGTACCAGTTCCCCTCCATGGAGCAGCTGGCCG...AAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCCTGGCCCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GGTCCAAGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACCGGCCAGCTGCTCCATaGAGGGGAACTGGTACCCCT | + |
Preference number: 4 (lower is better) Translates to: GPRLPTGLTPTHIRALAHRPAAP*RGTGTP Trigger: AGGGGTACCAGTTCCCCTCCATGGAGCAGCTGGCCG...GTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCTTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | TCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAGACACCTCCATGGTGTaGTTGACCTGGCCCATCCCC | + |
Preference number: 4 (lower is better) Translates to: SSAWLALHHLSCPESTRKDTSMV*LTWPIP Trigger: GGGGATGGGCCAGGTCAACCACACCATGGAGGTGTC...TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR TCA 90 bp | GGTCCAAGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACCCACATCATGGTAGGTaGGGATGGCTGGGCGGTTCC | + |
Preference number: 4 (lower is better) Translates to: GPRLPTGLTPTHIRALAHPHHGR*GWLGGS Trigger: GGAACCGCCCAGCCATCCTCACCTACCATGATGTGG...GTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCTTGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | GGCCCTGTGGTGGCAGGGTATGGGGGTTCCTGCCCCCATGTCAGGGTTCTCCATAGCACAGCTTGTGATTaGGACCCACATCATGGTAGG | + |
Preference number: 4 (lower is better) Translates to: GPVVAGYGGSCPHVRVLHSTACD*DPHHGR Trigger: CCTACCATGATGTGGGTCTCAATCACAAGCTGTGCT...ATGGAGAACCCTGACATGGGGGCAGGAACCCCCATACCCTGCCACCACAGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | TTGATGCAAGGGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGCCCCTGAGGGAACTGTaGCGCTCCCACCTGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: LMQGLQERDTLKVQGCPLPLREL*RSHLLP Trigger: GGGCAGCAGGTGGGAGCGTCACAGTTCCCTCAGGGG...CAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACCCTTGCATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | AGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACTACCCAAGCATGGCGGCCAGCTaGTCCATGGAGGGGAACTGG | + |
Preference number: 4 (lower is better) Translates to: RLPTGLTPTHIRALAHYPSMAAS*SMEGNW Trigger: CCAGTTCCCCTCCATGGAGCAGCTGGCCGCCATGCT...TGGGTAGTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | ACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTGGGCTTTAGCCCTGTCAGCAGTTaGAGCCTGTGTCCCAGCACC | + |
Preference number: 4 (lower is better) Translates to: THHLQTSHLPDPGAGLGFSPVSS*SLCPST Trigger: GGTGCTGGGACACAGGCTCCAACTGCTGACAGGGCT...AAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR CCA 90 bp | CACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGCTGTCTGTCTAGAGCGCCCTGGTTATCCATCTCAGTaGCATCCTGGCCGCGGAGCA | + |
Preference number: 4 (lower is better) Translates to: HLSCPESTRKMAVCLERPGYPSQ*HPGRGA Trigger: TGCTCCGCGGCCAGGATGCCACTGAGATGGATAACC...AGGGCGCTCTAGACAGACAGCCATTTTCCTGGTGCTCTCTGGGCAGGACAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR CCA 90 bp | TCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAAGCCAGAGAGCTTGGTaGCAGCCCAGTCAATCCAGC | + |
Preference number: 4 (lower is better) Translates to: SSAWLALHHLSCPESTRKSQRAW*QPSQSS Trigger: GCTGGATTGACTGGGCTGCCACCAAGCTCTCTGGCT...TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTGGAGTGTCTTGGCATTaGGCACCGTCCCAGGTCGGT | + |
Preference number: 4 (lower is better) Translates to: AHYPPSSNLTSARSRGWAGVSWH*APSQVG Trigger: ACCGACCTGGGACGGTGCCCAATGCCAAGACACTCC...AGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | TCTCTGGGGATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGGGCAGCGGAGTGTCTTaGCATTGGGCACCGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: SLGMRADETNGQAVSAYLGSGVS*HWAPSQ Trigger: CTGGGACGGTGCCCAATGCCAAGACACTCCGCTGCC...CAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGATGGTGTGGTTGACCTaGCCCATCCCCTCACTGCTG | + |
Preference number: 4 (lower is better) Translates to: SAWLALHHLSCPESTRKMMVWLT*PIPSLL Trigger: CAGCAGTGAGGGGATGGGCCAGGTCAACCACACCAT...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR CCA 90 bp | CACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGCTGTCTGTCTAGAGCGCCCTATGGTGTGGTTGACCTaGCCCATCCCCTCACTGCTG | + |
Preference number: 4 (lower is better) Translates to: HLSCPESTRKMAVCLERPMVWLT*PIPSLL Trigger: CAGCAGTGAGGGGATGGGCCAGGTCAACCACACCAT...AGGGCGCTCTAGACAGACAGCCATTTTCCTGGTGCTCTCTGGGCAGGACAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR CCA 90 bp | ACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTGGGCTTTGACACCTCCATGGTGTaGTTGACCTGGCCCATCCCC | + |
Preference number: 4 (lower is better) Translates to: THHLQTSHLPDPGAGLGFDTSMV*LTWPIP Trigger: GGGGATGGGCCAGGTCAACCACACCATGGAGGTGTC...AAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR TCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGGCGGGTCATGCTGGCTaGGGGCACTGCTCCTCCACT | + |
Preference number: 4 (lower is better) Translates to: SFSSLPTIFKPHICQIQGAGHAG*GHCSST Trigger: AGTGGAGGAGCAGTGCCCTCAGCCAGCATGACCCGC...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000162578.8 |
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CDS-3UTR GCA 90 bp | TCTCTGGGGATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGGGAAATCGCAGCTCCTaGAGCCCTGCCATGGTCACG | + |
Preference number: 4 (lower is better) Translates to: SLGMRADETNGQAVSAYLGNRSS*SPAMVT Trigger: CGTGACCATGGCAGGGCTGCAGGAGCTGCGATTTCC...CAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR GCA 90 bp | TGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACATACATCATCCCCGACGCTCCCACCTGCTaGCCAGGGGCATCCACGTGG | + |
Preference number: 4 (lower is better) Translates to: CGCPLASEHPYNTTYIIPDAPTC*PGASTW Trigger: CCACGTGGATGCCCCTGGGCAGCAGGTGGGAGCGTC...GGGGATGATGTATGTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | ATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTCTTTGACGCTCCCACCTGCTaGCCAGGGGCATCCACGTGG | + |
Preference number: 4 (lower is better) Translates to: ISSPSSKQRSLYLPICVFDAPTC*PGASTW Trigger: CCACGTGGATGCCCCTGGGCAGCAGGTGGGAGCGTC...AAAGACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | GGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTAGCATGGCGGCCAGCTaGTCCATGGAGGGGAACTGG | + |
Preference number: 4 (lower is better) Translates to: GNLQPLQQAEVIVSSHLCSMAAS*SMEGNW Trigger: CCAGTTCCCCTCCATGGAGCAGCTGGCCGCCATGCT...ACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | AGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACTACCCACCTGCAGCCCTGCCATaGTCACGTCGTGGAGCAGAA | + |
Preference number: 4 (lower is better) Translates to: RLPTGLTPTHIRALAHYPPAALP*SRRGAE Trigger: TTCTGCTCCACGACGTGACCATGGCAGGGCTGCAGG...TGGGTAGTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR CCA 90 bp | ATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACTCTGGGCGGTTCCCTTTaGGAGAGCCCCGGATCACCA | + |
Preference number: 4 (lower is better) Translates to: MAVCLERPLVATILMTVTLGGSL*ESPGSP Trigger: TGGTGATCCGGGGCTCTCCCAAAGGGAACCGCCCAG...AGTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTCGGCCAGCTGCTCCATaGAGGGGAACTGGTACCCCT | + |
Preference number: 4 (lower is better) Translates to: GNLQPLQQAEVIVSSHLCRPAAP*RGTGTP Trigger: AGGGGTACCAGTTCCCCTCCATGGAGCAGCTGGCCG...ACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | TCCGTGTTGTTCACCAGCTCCTCCTGGCTGAAGAGATGGGAGAGTACAGTGTCTCGGCCAGCTGCTCCATaGAGGGGAACTGGTACCCCT | + |
Preference number: 4 (lower is better) Translates to: SVLFTSSSWLKRWESTVSRPAAP*RGTGTP Trigger: AGGGGTACCAGTTCCCCTCCATGGAGCAGCTGGCCG...AGACACTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAACAACACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
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CDS-3UTR CCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCCACACTCGGGAGCATaGCGGCCAGCTGCTCCATGG | + |
Preference number: 4 (lower is better) Translates to: SFSSLPTIFKPHICQIQGPHSGA*RPAAPW Trigger: CCATGGAGCAGCTGGCCGCCATGCTCCCGAGTGTGG...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GGTCCAAGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACAGCCAGAGAGCTTGGTaGCAGCCCAGTCAATCCAGC | + |
Preference number: 4 (lower is better) Translates to: GPRLPTGLTPTHIRALAHSQRAW*QPSQSS Trigger: GCTGGATTGACTGGGCTGCCACCAAGCTCTCTGGCT...GTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCTTGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | AGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACTACCCAGGAGTGTCTTGGCATTaGGCACCGTCCCAGGTCGGT | + |
Preference number: 4 (lower is better) Translates to: RLPTGLTPTHIRALAHYPGVSWH*APSQVG Trigger: ACCGACCTGGGACGGTGCCCAATGCCAAGACACTCC...TGGGTAGTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | CCCAAGGGCCAGGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTGACTACCAGCATCACTaGGCAGCGGAGTGTCTTGGC | + |
Preference number: 4 (lower is better) Translates to: PKGQAISSPSSKQRSLYLDYQHH*AAECLG Trigger: GCCAAGACACTCCGCTGCCCAGTGATGCTGGTAGTC...AAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCCTGGCCCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | CCCAAGGGCCAGGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTATGGTGTGGTTGACCTaGCCCATCCCCTCACTGCTG | + |
Preference number: 4 (lower is better) Translates to: PKGQAISSPSSKQRSLYLMVWLT*PIPSLL Trigger: CAGCAGTGAGGGGATGGGCCAGGTCAACCACACCAT...AAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCCTGGCCCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGGTCTGACTCCGACACCTCCATGGTGTaGTTGACCTGGCCCATCCCC | + |
Preference number: 4 (lower is better) Translates to: GYRKGTLLRSKAAHWSDSDTSMV*LTWPIP Trigger: GGGGATGGGCCAGGTCAACCACACCATGGAGGTGTC...GGAGTCAGACCAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR CCA 90 bp | ATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGGTGAGATGGCGAGGCGGGTCATGCTaGCTGAGGGCATGTAGCCCA | + |
Preference number: 4 (lower is better) Translates to: MRADETNGQAVSAYLVRWRGGSC*LRACSP Trigger: TGGGCTACATGCCCTCAGCCAGCATGACCCGCCTCG...CCATCTCACCAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | GGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTGCTGTCCCAGCTCCTCCTGGCTaGAGAGATGGGAGAGTACAG | + |
Preference number: 4 (lower is better) Translates to: GVCKASPSHHLRLLCCAVPAPPG*RDGRVQ Trigger: CTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGG...GACAGCACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | ATTCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGACCTGGTTGTGTCACCTaGGGAAGACCACCAGAATCT | + |
Preference number: 4 (lower is better) Translates to: ILQPGWPYTTCPAQRAPGPGCVT*GRPPES Trigger: AGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGG...TCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR GCA 90 bp | TGGTTGTGTCACCTGAGGAAGACCACCAGAATCTGCCATCTTCAGGAAGGTCGTAGCATGGCGGCCAGCTaGTCCATGGAGGGGAACTGG | + |
Preference number: 4 (lower is better) Translates to: WLCHLRKTTRICHLQEGRSMAAS*SMEGNW Trigger: CCAGTTCCCCTCCATGGAGCAGCTGGCCGCCATGCT...ACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTTCCTCAGGTGACACAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
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CDS-3UTR CCA 90 bp | TTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGCTGGGCGGTTCCCTTTaGGAGAGCCCCGGATCACCA | + |
Preference number: 4 (lower is better) Translates to: FSSLPTIFKPHICQIQGLLGGSL*ESPGSP Trigger: TGGTGATCCGGGGCTCTCCCAAAGGGAACCGCCCAG...CAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GGTCCAAGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACCCAGGGGCATCCACGTaGCACACCACAAAGTGTTTG | + |
Preference number: 4 (lower is better) Translates to: GPRLPTGLTPTHIRALAHPGAST*HTTKCL Trigger: CAAACACTTTGTGGTGTGCCACGTGGATGCCCCTGG...GTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCTTGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | TCTCTGGGGATGAGAGCAGATGAAACCAATGGCCAGGCTGTGAGCGCCTACTTGGACTACCAGCATCACTaGGCAGCGGAGTGTCTTGGC | + |
Preference number: 4 (lower is better) Translates to: SLGMRADETNGQAVSAYLDYQHH*AAECLG Trigger: GCCAAGACACTCCGCTGCCCAGTGATGCTGGTAGTC...CAAGTAGGCGCTCACAGCCTGGCCATTGGTTTCATCTGCTCTCATCCCCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGCTCAGTCAGCTTCCCTaGTTGTGTCACCTGAGGAAG | + |
Preference number: 4 (lower is better) Translates to: SAWLALHHLSCPESTRKMLSQLP*LCHLRK Trigger: CTTCCTCAGGTGACACAACCAGGGAAGCTGACTGAG...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR CCA 90 bp | TCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAGGAGACAGATGGCACTaGACACTTCCAGTCTGTGTC | + |
Preference number: 4 (lower is better) Translates to: SSAWLALHHLSCPESTRKGDRWH*TLPVCV Trigger: GACACAGACTGGAAGTGTCCAGTGCCATCTGTCTCC...TTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR CAA 72 bp | TATCAGCGCCCTGGGGCAGCCAGGCAGCCTAAACAGTaGAGCCTTCCCTGTGATAGGAAACACGACACACGT | + |
Preference number: 4 (lower is better) Translates to: YQRPGAARQPKQ*SLPCDRKHDTR Trigger: ACGTGTGTCGTGTTTCCTATCACAGGGAAGGCTCAACTGTTTAGGCTGCCTGGCTGCCCCAGGGCGCTGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073139.14 |
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CDS-3UTR TCA 90 bp | ATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTCTTTCCTCCATGGTGTGGTTaGCCTGGCCCATCCCCTCAC | + |
Preference number: 4 (lower is better) Translates to: ISSPSSKQRSLYLPICVFPPWCG*PGPSPH Trigger: GTGAGGGGATGGGCCAGGTCAACCACACCATGGAGG...AAAGACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | ACAGATAAATGGATGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACGACGCTCCCACCTGCTaGCCAGGGGCATCCACGTGG | + |
Preference number: 4 (lower is better) Translates to: TDKWMWVSSCLRTPIQYHDAPTC*PGASTW Trigger: CCACGTGGATGCCCCTGGGCAGCAGGTGGGAGCGTC...GTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | GCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTATGTTCCAGAAGAGCTaGAGGTTGGCCTGGTTCACC | + |
Preference number: 4 (lower is better) Translates to: AHYPPSSNLTSARSRGWAMFQKS*RLAWFT Trigger: GGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACAT...AGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | TCCAAAGGGATGGGTAATCATGAAGTTCTCAGGGGCTACACACAGCATACACAGGTGCGAGGCGGGTCATaGTGGCTGAGGGCACTGCTC | + |
Preference number: 4 (lower is better) Translates to: SKGMGNHEVLRGYTQHTQVRGGS*WLRALL Trigger: GAGCAGTGCCCTCAGCCAGCATGACCCGCCTCGCAC...CTGTGTATGCTGTGTGTAGCCCCTGAGAACTTCATGATTACCCATCCCTTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 |
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CDS-3UTR CCA 90 bp | AGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACTACCCACCAGGGGCATCCACGTaGCACACCACAAAGTGTTTG | + |
Preference number: 4 (lower is better) Translates to: RLPTGLTPTHIRALAHYPPGAST*HTTKCL Trigger: CAAACACTTTGTGGTGTGCCACGTGGATGCCCCTGG...TGGGTAGTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTGCTGTCCCAGGGGCATCCACGTaGCACACCACAAAGTGTTTG | + |
Preference number: 4 (lower is better) Translates to: GVCKASPSHHLRLLCCAVPGAST*HTTKCL Trigger: CAAACACTTTGTGGTGTGCCACGTGGATGCCCCTGG...GACAGCACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | AGTACAGTGTCTGGTAAAGTGCTGGTCAAGCCAGAGAGCTTGGTGGCAGCCCAGCCAGGGGCATCCACGTaGCACACCACAAAGTGTTTG | + |
Preference number: 4 (lower is better) Translates to: STVSGKVLVKPESLVAAQPGAST*HTTKCL Trigger: CAAACACTTTGTGGTGTGCCACGTGGATGCCCCTGG...CTGGGCTGCCACCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACACTGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
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CDS-3UTR CCA 90 bp | GCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTGGCCTTACACCACCTTTCACCAGCTCCTCCTaGCTGAAGAGATGGGAGAGT | + |
Preference number: 4 (lower is better) Translates to: APMSGFSIFFSLAGLTPPFTSSS*LKRWES Trigger: ACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAA...AGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTGGCCTTACACCACCTAGCTGCAGGTTGGCCTaGTTCACCACGTTTGAGATC | + |
Preference number: 4 (lower is better) Translates to: APMSGFSIFFSLAGLTPPSCRLA*FTTFEI Trigger: GATCTCAAACGTGGTGAACCAGGCCAACCTGCAGCT...AGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GGTCCAAGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACAGAAGAGCTGCAGGTTaGCCTGGTTCACCACGTTTG | + |
Preference number: 4 (lower is better) Translates to: GPRLPTGLTPTHIRALAHRRAAG*PGSPRL Trigger: CAAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCT...GTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCTTGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | AGTGTCTTGGCATTGGGCACCGTCCCAGGTCGGTTAATATCAAGGTCTCTGCGGCCTGTGGGAGACAGATaGCACTGGACACTTCCAGTC | + |
Preference number: 4 (lower is better) Translates to: SVLALGTVPGRLISRSLRPVGDR*HWTLPV Trigger: GACTGGAAGTGTCCAGTGCCATCTGTCTCCCACAGG...CCGCAGAGACCTTGATATTAACCGACCTGGGACGGTGCCCAATGCCAAGACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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3UTR CAA 72 bp | ACTACCAGCATCACTGGGCAGCGGAGTGTCTTGGCATaGGGCACCGTCCCAGGTCGGTTAATATCAAGGTCT | + |
Preference number: 4 (lower is better) Translates to: TTSITGQRSVLA*GTVPGRLISRS Trigger: AGACCTTGATATTAACCGACCTGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCCAGTGATGCTGGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160915.8 ENSMUST00000166358.8 |
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CDS-3UTR TCA 90 bp | ATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAATGGATGTGGGCCACATCATGGTAGGTaGGGATGGCTGGGCGGTTCC | + |
Preference number: 4 (lower is better) Translates to: MAYSYRKGRHVPQINGCGPHHGR*GWLGGS Trigger: GGAACCGCCCAGCCATCCTCACCTACCATGATGTGG...CCCACATCCATTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | TTGATGCAAGGGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGCCAGCTCCTCCTGGCTaGAGAGATGGGAGAGTACAG | + |
Preference number: 4 (lower is better) Translates to: LMQGLQERDTLKVQGCPLPAPPG*RDGRVQ Trigger: CTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGG...CAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACCCTTGCATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | GCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTCAGTGTCTGGTAAAGTaGTGGTCAAGCCAGAGAGCT | + |
Preference number: 4 (lower is better) Translates to: AHYPPSSNLTSARSRGWAQCLVK*WSSQRA Trigger: AGCTCTCTGGCTTGACCAGCACTTTACCAGACACTG...AGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | GGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGGTCTGACTCCATGTTCCAGAAGAGCTaGAGGTTGGCCTGGTTCACC | + |
Preference number: 4 (lower is better) Translates to: GYRKGTLLRSKAAHWSDSMFQKS*RLAWFT Trigger: GGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACAT...GGAGTCAGACCAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | ACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTGGGCTTTTCGGTCCTTCAAGTGTaGAATGTAGCCCATGCCTTG | + |
Preference number: 4 (lower is better) Translates to: THHLQTSHLPDPGAGLGFSVLQV*NVAHAL Trigger: CAAGGCATGGGCTACATTGCACACTTGAAGGACCGA...AAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000162578.8 |
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CDS-3UTR CCA 90 bp | ACTGGACTCCAGAGCAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATGCCATGGTCACGTCGTaGAGCAGAAGCCCTGTCAGC | + |
Preference number: 4 (lower is better) Translates to: TGLQSSLEMAYSYRKGRHAMVTS*SRSPVS Trigger: GCTGACAGGGCTTCTGCTCCACGACGTGACCATGGC...ATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTGCTCTGGAGTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR CCA 90 bp | GCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTGGCCTTACACCACCTTGTCTGGTAAAGTGCTaGTCAAGCCAGAGAGCTTGG | + |
Preference number: 4 (lower is better) Translates to: APMSGFSIFFSLAGLTPPCLVKC*SSQRAW Trigger: CCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACA...AGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | AGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACTACCCACTCAGTCAGCTTCCCTaGTTGTGTCACCTGAGGAAG | + |
Preference number: 4 (lower is better) Translates to: RLPTGLTPTHIRALAHYPLSQLP*LCHLRK Trigger: CTTCCTCAGGTGACACAACCAGGGAAGCTGACTGAG...TGGGTAGTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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3UTR CAA 72 bp | GTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTaGTGCTGTGCTGTCCCAAGGTGGATCCCCTCATTT | + |
Preference number: 4 (lower is better) Translates to: VCKASPSHHLRL*CCAVPRWIPSF Trigger: AAATGAGGGGATCCACCTTGGGACAGCACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 ENSMUST00000166358.8 |
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3UTR CAA 72 bp | GCCATCTTCAGGAAGGTCGTAGTGGTTGGGTCCAGTTaGGAGTTACACTCAACCTGGGAACAAGGAGCCAGC | + |
Preference number: 4 (lower is better) Translates to: AIFRKVVVVGSS*ELHSTWEQGAS Trigger: GCTGGCTCCTTGTTCCCAGGTTGAGTGTAACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160915.8 |
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3UTR CAA 72 bp | GCCATCTTCAGGAAGGTCGTAGTGGTTGGGTCCAGTTaGGAGTTACACTCAACCACCCCTTCCTCAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: AIFRKVVVVGSS*ELHSTTPSSAG Trigger: ACCTGCTGAGGAAGGGGTGGTTGAGTGTAACTCCAAACTGGACCCAACCACTACGACCTTCCTGAAGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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CDS-3UTR TCA 90 bp | GAGACAGGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTCCTGGTTGTGTCACCTaGGGAAGACCACCAGAATCT | + |
Preference number: 4 (lower is better) Translates to: ETGVCKASPSHHLRLLCCPGCVT*GRPPES Trigger: AGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGG...ACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCCTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR GCA 90 bp | ATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACTATGTTCCAGAAGAGCTaGAGGTTGGCCTGGTTCACC | + |
Preference number: 4 (lower is better) Translates to: MAVCLERPLVATILMTVTMFQKS*RLAWFT Trigger: GGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACAT...AGTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | CCCAAGGGCCAGGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTTCCAGCCTTTGCCGTTaGGGTCAATGTTCATCAACA | + |
Preference number: 4 (lower is better) Translates to: PKGQAISSPSSKQRSLYLSSLCR*GQCSST Trigger: TGTTGATGAACATTGACCCCAACGGCAAAGGCTGGA...AAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCCTGGCCCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTGGCCTTACACCACCTTCCAGCCTTTGCCGTTaGGGTCAATGTTCATCAACA | + |
Preference number: 4 (lower is better) Translates to: APMSGFSIFFSLAGLTPPSSLCR*GQCSST Trigger: TGTTGATGAACATTGACCCCAACGGCAAAGGCTGGA...AGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | ATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAATGGATGTGGGAGCCAGAGAGCTTGGTaGCAGCCCAGTCAATCCAGC | + |
Preference number: 4 (lower is better) Translates to: MAYSYRKGRHVPQINGCGSQRAW*QPSQSS Trigger: GCTGGATTGACTGGGCTGCCACCAAGCTCTCTGGCT...CCCACATCCATTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | AATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACAGAAGAGCTGCAGGTTaGCCTGGTTCACCACGTTTG | + |
Preference number: 4 (lower is better) Translates to: NGCLSRAPSCGYHPHDCHRRAAG*PGSPRL Trigger: CAAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCT...GTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTGGCCTTACACCACCTGAAGGTCGTAGTGGTTaGGTCCAGTTTGGAGTTACA | + |
Preference number: 4 (lower is better) Translates to: APMSGFSIFFSLAGLTPPEGRSG*VQFGVT Trigger: TGTAACTCCAAACTGGACCCAACCACTACGACCTTC...AGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GAGACAGGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTCTCAGTCAGCTTCCCTaGTTGTGTCACCTGAGGAAG | + |
Preference number: 4 (lower is better) Translates to: ETGVCKASPSHHLRLLCCLSQLP*LCHLRK Trigger: CTTCCTCAGGTGACACAACCAGGGAAGCTGACTGAG...ACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCCTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR TCA 90 bp | TCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTCTAAACCCCCTGAGGGAACTGTaGCGCTCCCACCTGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: SNTWSAIYSKGLVLPPLNPLREL*RSHLLP Trigger: GGGCAGCAGGTGGGAGCGTCACAGTTCCCTCAGGGG...GTTTAGAGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCCTGGTTGTGTCACCTaGGGAAGACCACCAGAATCT | + |
Preference number: 4 (lower is better) Translates to: SFSSLPTIFKPHICQIQGPGCVT*GRPPES Trigger: AGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGG...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
||
CDS-3UTR TCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTCCTCCATGGTGTGGTTaGCCTGGCCCATCCCCTCAC | + |
Preference number: 4 (lower is better) Translates to: GISSTTSKQSHSVFTEARPPWCG*PGPSPH Trigger: GTGAGGGGATGGGCCAGGTCAACCACACCATGGAGG...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR GCA 90 bp | GGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTGCTGTCAAGACCACCAGAATCTaGCATCTTCAGGAAGGTCGT | + |
Preference number: 4 (lower is better) Translates to: GVCKASPSHHLRLLCCAVKTTRI*HLQEGR Trigger: ACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTT...GACAGCACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR CCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTCTGGGCGGTTCCCTTTaGGAGAGCCCCGGATCACCA | + |
Preference number: 4 (lower is better) Translates to: GISSTTSKQSHSVFTEARLGGSL*ESPGSP Trigger: TGGTGATCCGGGGCTCTCCCAAAGGGAACCGCCCAG...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR CCA 90 bp | GGCAATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTTCCTGGCTGAAGAGATaGGAGAGTACAGTGTCTGGT | + |
Preference number: 4 (lower is better) Translates to: GNLQPLQQAEVIVSSHLCSWLKR*ESTVSG Trigger: ACCAGACACTGTACTCTCCCATCTCTTCAGCCAGGA...ACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGATTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR CCA 90 bp | GGAGTGTGTAAGGCGAGCCCCTCACACCATCTAAGACTGTTGTGCTGTGCTGTCGAAGGTCGTAGTGGTTaGGTCCAGTTTGGAGTTACA | + |
Preference number: 4 (lower is better) Translates to: GVCKASPSHHLRLLCCAVEGRSG*VQFGVT Trigger: TGTAACTCCAAACTGGACCCAACCACTACGACCTTC...GACAGCACAGCACAACAGTCTTAGATGGTGTGAGGGGCTCGCCTTACACACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR TCA 90 bp | TCCAAAGGGATGGGTAATCATGAAGTTCTCAGGGGCTACACACAGCATACACAGCTGGTTCACCACGTTTaGGATCTGCTGCCGGTAGCT | + |
Preference number: 4 (lower is better) Translates to: SKGMGNHEVLRGYTQHTQLVHHV*DLLPVA Trigger: AGCTACCGGCAGCAGATCTCAAACGTGGTGAACCAG...CTGTGTATGCTGTGTGTAGCCCCTGAGAACTTCATGATTACCCATCCCTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR GCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCAGTGTCTGGTAAAGTaGTGGTCAAGCCAGAGAGCT | + |
Preference number: 4 (lower is better) Translates to: SFSSLPTIFKPHICQIQGQCLVK*WSSQRA Trigger: AGCTCTCTGGCTTGACCAGCACTTTACCAGACACTG...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR CCA 90 bp | CAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAAGGTTATCCATCTCAGTaGCATCCTGGCCGCGGAGCA | + |
Preference number: 4 (lower is better) Translates to: QSRNGLQLQKGAACATDKGYPSQ*HPGRGA Trigger: TGCTCCGCGGCCAGGATGCCACTGAGATGGATAACC...TTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
||
CDS-3UTR CCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGTGTCTGGTAAAGTGCTaGTCAAGCCAGAGAGCTTGG | + |
Preference number: 4 (lower is better) Translates to: SFSSLPTIFKPHICQIQGCLVKC*SSQRAW Trigger: CCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACA...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR CCA 90 bp | AGCTTTAGCTCACTACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGTCCTGGCTGAAGAGATaGGAGAGTACAGTGTCTGGT | + |
Preference number: 4 (lower is better) Translates to: SFSSLPTIFKPHICQIQGSWLKR*ESTVSG Trigger: ACCAGACACTGTACTCTCCCATCTCTTCAGCCAGGA...CCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGTAGTGAGCTAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
||
CDS-3UTR CCA 90 bp | CATCTGTGTCTTTCTAACAAGCTCACTTCTCAAGTATTGTCTGTGACACACTGGGGCAGCGGAGTGTCTTaGCATTGGGCACCGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: HLCLSNKLTSQVLSVTHWGSGVS*HWAPSQ Trigger: CTGGGACGGTGCCCAATGCCAAGACACTCCGCTGCC...CCAGTGTGTCACAGACAATACTTGAGAAGTGAGCTTGTTAGAAAGACACAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | ATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACTGAAGGTCGTAGTGGTTaGGTCCAGTTTGGAGTTACA | + |
Preference number: 4 (lower is better) Translates to: MAVCLERPLVATILMTVTEGRSG*VQFGVT Trigger: TGTAACTCCAAACTGGACCCAACCACTACGACCTTC...AGTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | CAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAACTGGTTCACCACGTTTaGGATCTGCTGCCGGTAGCT | + |
Preference number: 4 (lower is better) Translates to: QSRNGLQLQKGAACATDKLVHHV*DLLPVA Trigger: AGCTACCGGCAGCAGATCTCAAACGTGGTGAACCAG...TTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | ATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAATGGATGTGGGTCCTGGCTGAAGAGATaGGAGAGTACAGTGTCTGGT | + |
Preference number: 4 (lower is better) Translates to: MAYSYRKGRHVPQINGCGSWLKR*ESTVSG Trigger: ACCAGACACTGTACTCTCCCATCTCTTCAGCCAGGA...CCCACATCCATTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTATGGTGTGGTTGACCTaGCCCATCCCCTCACTGCTG | + |
Preference number: 4 (lower is better) Translates to: GISSTTSKQSHSVFTEARMVWLT*PIPSLL Trigger: CAGCAGTGAGGGGATGGGCCAGGTCAACCACACCAT...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | ATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAATGGATGTGGGGATGTCATGTTCCTGTaGGAGACAGATGGCACTGGA | + |
Preference number: 4 (lower is better) Translates to: MAYSYRKGRHVPQINGCGDVMFL*ETDGTG Trigger: TCCAGTGCCATCTGTCTCCCACAGGAACATGACATC...CCCACATCCATTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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CDS-3UTR TCA 90 bp | TCCAAAGGGATGGGTAATCATGAAGTTCTCAGGGGCTACACACAGCATACACAGAGCACAGCTTGTGATTaGGACCCACATCATGGTAGG | + |
Preference number: 4 (lower is better) Translates to: SKGMGNHEVLRGYTQHTQSTACD*DPHHGR Trigger: CCTACCATGATGTGGGTCTCAATCACAAGCTGTGCT...CTGTGTATGCTGTGTGTAGCCCCTGAGAACTTCATGATTACCCATCCCTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | CAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAACCTGGTTGTGTCACCTaGGGAAGACCACCAGAATCT | + |
Preference number: 4 (lower is better) Translates to: QSRNGLQLQKGAACATDKPGCVT*GRPPES Trigger: AGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGG...TTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | GATATCTTAAGAACACAGCAAAAAGATGTCCAATACTTGGAGTGCTATCTACAGGCGGGTCATGCTGGCTaGGGGCACTGCTCCTCCACT | + |
Preference number: 4 (lower is better) Translates to: DILRTQQKDVQYLECYLQAGHAG*GHCSST Trigger: AGTGGAGGAGCAGTGCCCTCAGCCAGCATGACCCGC...CTGTAGATAGCACTCCAAGTATTGGACATCTTTTTGCTGTGTTCTTAAGATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 |
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CDS-3UTR CCA 90 bp | AAGATGTCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTAGCCCTGTCAGCAGTTaGAGCCTGTGTCCCAGCACC | + |
Preference number: 4 (lower is better) Translates to: KMSNTWSAIYSKGLVLPPSPVSS*SLCPST Trigger: GGTGCTGGGACACAGGCTCCAACTGCTGACAGGGCT...AGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGACATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR CCA 90 bp | ACTGGACTCCAGAGCAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATTCCAGCCTTTGCCGTTaGGGTCAATGTTCATCAACA | + |
Preference number: 4 (lower is better) Translates to: TGLQSSLEMAYSYRKGRHSSLCR*GQCSST Trigger: TGTTGATGAACATTGACCCCAACGGCAAAGGCTGGA...ATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTGCTCTGGAGTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | CAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAACTCAGTCAGCTTCCCTaGTTGTGTCACCTGAGGAAG | + |
Preference number: 4 (lower is better) Translates to: QSRNGLQLQKGAACATDKLSQLP*LCHLRK Trigger: CTTCCTCAGGTGACACAACCAGGGAAGCTGACTGAG...TTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | ACAGATAAATGGATGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACCAGTGTCTGGTAAAGTaGTGGTCAAGCCAGAGAGCT | + |
Preference number: 4 (lower is better) Translates to: TDKWMWVSSCLRTPIQYHQCLVK*WSSQRA Trigger: AGCTCTCTGGCTTGACCAGCACTTTACCAGACACTG...GTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | ACAGATAAATGGATGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACTCGGTCCTTCAAGTGTaGAATGTAGCCCATGCCTTG | + |
Preference number: 4 (lower is better) Translates to: TDKWMWVSSCLRTPIQYHSVLQV*NVAHAL Trigger: CAAGGCATGGGCTACATTGCACACTTGAAGGACCGA...GTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 |
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CDS-3UTR CCA 90 bp | GGGATTAGTTCTACCACCTCTAAACAGTCACATTCAGTATTCACGGAAGCACGTAGCTGCAGGTTGGCCTaGTTCACCACGTTTGAGATC | + |
Preference number: 4 (lower is better) Translates to: GISSTTSKQSHSVFTEARSCRLA*FTTFEI Trigger: GATCTCAAACGTGGTGAACCAGGCCAACCTGCAGCT...ACGTGCTTCCGTGAATACTGAATGTGACTGTTTAGAGGTGGTAGAACTAATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | AAGATGTCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTGACTACCAGCATCACTaGGCAGCGGAGTGTCTTGGC | + |
Preference number: 4 (lower is better) Translates to: KMSNTWSAIYSKGLVLPPDYQHH*AAECLG Trigger: GCCAAGACACTCCGCTGCCCAGTGATGCTGGTAGTC...AGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGACATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | AAGAGAAGACAACTACCAATGGGAAACCACATACAGGAAGGAGGACCTGATATATTCACCAGCTCCTCCTaGCTGAAGAGATGGGAGAGT | + |
Preference number: 4 (lower is better) Translates to: KRRQLPMGNHIQEGGPDIFTSSS*LKRWES Trigger: ACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAA...TATATCAGGTCCTCCTTCCTGTATGTGGTTTCCCATTGGTAGTTGTCTTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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3UTR CAA 72 bp | CATCTGTGTCTTTCTAACAAGCTCACTTCTCAAGTATaGTCTGTGACACACTGGCCCAAGTTGACCAGGGCA | + |
Preference number: 4 (lower is better) Translates to: HLCLSNKLTSQV*SVTHWPKLTRA Trigger: TGCCCTGGTCAACTTGGGCCAGTGTGTCACAGACAATACTTGAGAAGTGAGCTTGTTAGAAAGACACAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000166358.8 |
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CDS-3UTR CCA 90 bp | AAGAGAAGACAACTACCAATGGGAAACCACATACAGGAAGGAGGACCTGATATATGTCTGGTAAAGTGCTaGTCAAGCCAGAGAGCTTGG | + |
Preference number: 4 (lower is better) Translates to: KRRQLPMGNHIQEGGPDICLVKC*SSQRAW Trigger: CCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACA...TATATCAGGTCCTCCTTCCTGTATGTGGTTTCCCATTGGTAGTTGTCTTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | AAGATGTCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTTTCACCAGCTCCTCCTaGCTGAAGAGATGGGAGAGT | + |
Preference number: 4 (lower is better) Translates to: KMSNTWSAIYSKGLVLPPFTSSS*LKRWES Trigger: ACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAA...AGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGACATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CCA 90 bp | TCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTCTAAACAGCTGCAGGTTGGCCTaGTTCACCACGTTTGAGATC | + |
Preference number: 4 (lower is better) Translates to: SNTWSAIYSKGLVLPPLNSCRLA*FTTFEI Trigger: GATCTCAAACGTGGTGAACCAGGCCAACCTGCAGCT...GTTTAGAGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR TCA 90 bp | GATATCTTAAGAACACAGCAAAAAGATGTCCAATACTTGGAGTGCTATCTACAGCTGGTTCACCACGTTTaGGATCTGCTGCCGGTAGCT | + |
Preference number: 4 (lower is better) Translates to: DILRTQQKDVQYLECYLQLVHHV*DLLPVA Trigger: AGCTACCGGCAGCAGATCTCAAACGTGGTGAACCAG...CTGTAGATAGCACTCCAAGTATTGGACATCTTTTTGCTGTGTTCTTAAGATATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | AAGAGAAGACAACTACCAATGGGAAACCACATACAGGAAGGAGGACCTGATATAAAGACCACCAGAATCTaGCATCTTCAGGAAGGTCGT | + |
Preference number: 4 (lower is better) Translates to: KRRQLPMGNHIQEGGPDIKTTRI*HLQEGR Trigger: ACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTT...TATATCAGGTCCTCCTTCCTGTATGTGGTTTCCCATTGGTAGTTGTCTTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR GCA 90 bp | TCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTCTAAACTCGGTCCTTCAAGTGTaGAATGTAGCCCATGCCTTG | + |
Preference number: 4 (lower is better) Translates to: SNTWSAIYSKGLVLPPLNSVLQV*NVAHAL Trigger: CAAGGCATGGGCTACATTGCACACTTGAAGGACCGA...GTTTAGAGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 |
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CDS-3UTR GCA 90 bp | TCCAATACTTGGAGTGCTATCTACAGTAAGGGATTAGTTCTACCACCTCTAAACAAGACCACCAGAATCTaGCATCTTCAGGAAGGTCGT | + |
Preference number: 4 (lower is better) Translates to: SNTWSAIYSKGLVLPPLNKTTRI*HLQEGR Trigger: ACGACCTTCCTGAAGATGGCAGATTCTGGTGGTCTT...GTTTAGAGGTGGTAGAACTAATCCCTTACTGTAGATAGCACTCCAAGTATTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | CACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGCTGTCTGTCTAGAGCGCCCTGCTGGGCGGTTCCCTTaGGGAGAGCCCCGGATCACC | + |
Preference number: 5 (lower is better) Translates to: HLSCPESTRKMAVCLERPAGRFP*GEPRIT Trigger: GGTGATCCGGGGCTCTCCCAAAGGGAACCGCCCAGC...AGGGCGCTCTAGACAGACAGCCATTTTCCTGGTGCTCTCTGGGCAGGACAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS CCA 90 bp | TCCTCAGGAAATCGCAGCTCCTGCAGCCCTGCCATGGTCACGTCGTaGAGCAGAAGCCCTGTCAGCAGTTGGAGCCTGTGTCCCAGCACC | + |
Preference number: 5 (lower is better) Translates to: SSGNRSSCSPAMVTS*SRSPVSSWSLCPST Trigger: GGTGCTGGGACACAGGCTCCAACTGCTGACAGGGCTTCTGCTCCACGACGTGACCATGGCAGGGCTGCAGGAGCTGCGATTTCCTGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS CCA 90 bp | GCAGGGGCTTCTCCTCAGGAAATCGCAGCTCCTGCAGCCCTGCCATaGTCACGTCGTGGAGCAGAAGCCCTGTCAGCAGTTGGAGCCTGT | + |
Preference number: 5 (lower is better) Translates to: AGASPQEIAAPAALP*SRRGAEALSAVGAC Trigger: ACAGGCTCCAACTGCTGACAGGGCTTCTGCTCCACGACGTGACCATGGCAGGGCTGCAGGAGCTGCGATTTCCTGAGGAGAAGCCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR CAA 90 bp | TCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGAAAATGGGGCAGCGGAGTGTCTaGGCATTGGGCACCGTCCCA | + |
Preference number: 5 (lower is better) Translates to: SAWLALHHLSCPESTRKMGQRSV*ALGTVP Trigger: TGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCC...CATTTTCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | GGTCCAAGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACGGGCAGCGGAGTGTCTaGGCATTGGGCACCGTCCCA | + |
Preference number: 5 (lower is better) Translates to: GPRLPTGLTPTHIRALAHGQRSV*ALGTVP Trigger: TGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCC...GTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCTTGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | ATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACTGCTGGGCGGTTCCCTTaGGGAGAGCCCCGGATCACC | + |
Preference number: 5 (lower is better) Translates to: MAVCLERPLVATILMTVTAGRFP*GEPRIT Trigger: GGTGATCCGGGGCTCTCCCAAAGGGAACCGCCCAGC...AGTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS CCA 90 bp | ACAATTGAGAGGAAGGCGTCAGGGTTATCCATCTCAGTGGCATCCTaGCCGCGGAGCAGGGGCTTCTCCTCAGGAAATCGCAGCTCCTGC | + |
Preference number: 5 (lower is better) Translates to: TIERKASGLSISVAS*PRSRGFSSGNRSSC Trigger: GCAGGAGCTGCGATTTCCTGAGGAGAAGCCCCTGCTCCGCGGCCAGGATGCCACTGAGATGGATAACCCTGACGCCTTCCTCTCAATTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000160964.8 ENSMUST00000166358.8 |
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CDS CCA 90 bp | CTGTGTCCACAATTGAGAGGAAGGCGTCAGGGTTATCCATCTCAGTaGCATCCTGGCCGCGGAGCAGGGGCTTCTCCTCAGGAAATCGCA | + |
Preference number: 5 (lower is better) Translates to: LCPQLRGRRQGYPSQ*HPGRGAGASPQEIA Trigger: TGCGATTTCCTGAGGAGAAGCCCCTGCTCCGCGGCCAGGATGCCACTGAGATGGATAACCCTGACGCCTTCCTCTCAATTGTGGACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000160964.8 ENSMUST00000166358.8 |
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CDS-3UTR CAA 90 bp | AGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACTACCCAAAGCCCTGTCAGCAGTaGGAGCCTGTGTCCCAGCAC | + |
Preference number: 5 (lower is better) Translates to: RLPTGLTPTHIRALAHYPKPCQQ*EPVSQH Trigger: GTGCTGGGACACAGGCTCCAACTGCTGACAGGGCTT...TGGGTAGTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS-3UTR CAA 90 bp | TTCATCAACACCAGCCCCTCCACCAGGTCAGGGAAGATGAGTGCAAACTTGGCCAAGCCCTGTCAGCAGTaGGAGCCTGTGTCCCAGCAC | + |
Preference number: 5 (lower is better) Translates to: FINTSPSTRSGKMSANLAKPCQQ*EPVSQH Trigger: GTGCTGGGACACAGGCTCCAACTGCTGACAGGGCTT...GGCCAAGTTTGCACTCATCTTCCCTGACCTGGTGGAGGGGCTGGTGTTGATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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CDS-3UTR CAA 90 bp | GCATGTGCCACAGATAAATGGATGTGGGTGTCCTCTTGCCTCAGAACACCCATAGCTGGGCGGTTCCCTTaGGGAGAGCCCCGGATCACC | + |
Preference number: 5 (lower is better) Translates to: ACATDKWMWVSSCLRTPIAGRFP*GEPRIT Trigger: GGTGATCCGGGGCTCTCCCAAAGGGAACCGCCCAGC...TATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGTGGCACATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | ATTCTTCAGCCTGGCTGGCCTTACACCACCTGTCCTGCCCAGAGAGCACCAGGACAGAAGAGCTGCAGGTaGGCCTGGTTCACCACGTTT | + |
Preference number: 5 (lower is better) Translates to: ILQPGWPYTTCPAQRAPGQKSCR*AWFTTF Trigger: AAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCTG...TCCTGGTGCTCTCTGGGCAGGACAGGTGGTGTAAGGCCAGCCAGGCTGAAGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | TTGATGCAAGGGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGGGGCAGCGGAGTGTCTaGGCATTGGGCACCGTCCCA | + |
Preference number: 5 (lower is better) Translates to: LMQGLQERDTLKVQGCPLGQRSV*ALGTVP Trigger: TGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCC...CAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACCCTTGCATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | AGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACTACCCAACCTCCATGGTGTGGTaGACCTGGCCCATCCCCTCA | + |
Preference number: 5 (lower is better) Translates to: RLPTGLTPTHIRALAHYPTSMVW*TWPIPS Trigger: TGAGGGGATGGGCCAGGTCAACCACACCATGGAGGT...TGGGTAGTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS TCA 90 bp | GTGGGAGACAGATGGCACTGGACACTTCCAGTCTGTGTCCACAATTaGGAGGAAGGCGTCAGGGTTATCCATCTCAGTGGCATCCTGGCC | + |
Preference number: 5 (lower is better) Translates to: VGDRWHWTLPVCVHN*EEGVRVIHLSGILA Trigger: GGCCAGGATGCCACTGAGATGGATAACCCTGACGCCTTCCTCTCAATTGTGGACACAGACTGGAAGTGTCCAGTGCCATCTGTCTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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CDS-3UTR CAA 90 bp | ACCCACCATCTTCAAACCTCACATCTGCCAGATCCAGGGGCTGGGCTGGGCTTTAGGTCTCTGCGGCTGTaGTACATGTTCCAGAAGAGC | + |
Preference number: 5 (lower is better) Translates to: THHLQTSHLPDPGAGLGFRSLRL*YMFQKS Trigger: GCTCTTCTGGAACATGTACAACAGCCGCAGAGACCT...AAAGCCCAGCCCAGCCCCTGGATCTGGCAGATGTGAGGTTTGAAGATGGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | GCCCCCATGTCAGGGTTCTCCATATTCTTCAGCCTGGCTGGCCTTACACCACCTAGGTCTCTGCGGCTGTaGTACATGTTCCAGAAGAGC | + |
Preference number: 5 (lower is better) Translates to: APMSGFSIFFSLAGLTPPRSLRL*YMFQKS Trigger: GCTCTTCTGGAACATGTACAACAGCCGCAGAGACCT...AGGTGGTGTAAGGCCAGCCAGGCTGAAGAATATGGAGAACCCTGACATGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | GGTTACAGGAAAGGGACACTCTTAAGGTCCAAGGCTGCCCACTGGTCTGACTCCAGTCAGCTTCCCTGGTaGTGTCACCTGAGGAAGACC | + |
Preference number: 5 (lower is better) Translates to: GYRKGTLLRSKAAHWSDSSQLPW*CHLRKT Trigger: GGTCTTCCTCAGGTGACACAACCAGGGAAGCTGACT...GGAGTCAGACCAGTGGGCAGCCTTGGACCTTAAGAGTGTCCCTTTCCTGTAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR CAA 90 bp | AGTATTCAAGACCAGCCTGGGCTACAGAAAGATTGCTCAACCCTCCCCCAACCAACCTCCATGGTGTGGTaGACCTGGCCCATCCCCTCA | + |
Preference number: 5 (lower is better) Translates to: SIQDQPGLQKDCSTLPQPTSMVW*TWPIPS Trigger: TGAGGGGATGGGCCAGGTCAACCACACCATGGAGGT...TGGTTGGGGGAGGGTTGAGCAATCTTTCTGTAGCCCAGGCTGGTCTTGAATACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073139.14 |
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CDS-3UTR CAA 90 bp | AATGGCTGTCTGTCTAGAGCGCCCTCTTGTGGCTACCATCCTCATGACTGTCACAGTCAGCTTCCCTGGTaGTGTCACCTGAGGAAGACC | + |
Preference number: 5 (lower is better) Translates to: NGCLSRAPSCGYHPHDCHSQLPW*CHLRKT Trigger: GGTCTTCCTCAGGTGACACAACCAGGGAAGCTGACT...GTGACAGTCATGAGGATGGTAGCCACAAGAGGGCGCTCTAGACAGACAGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 ENSMUST00000162578.8 |
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CDS-3UTR CAA 90 bp | ATCTCCAGCCCCTCCAGCAAGCAGAGGTCATTGTATCTTCCCATCTGTGTCTTTACCTCCATGGTGTGGTaGACCTGGCCCATCCCCTCA | + |
Preference number: 5 (lower is better) Translates to: ISSPSSKQRSLYLPICVFTSMVW*TWPIPS Trigger: TGAGGGGATGGGCCAGGTCAACCACACCATGGAGGT...AAAGACACAGATGGGAAGATACAATGACCTCTGCTTGCTGGAGGGGCTGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | AGGCTGCCCACTGGTCTGACTCCCACTCACATCAGAGCTTTAGCTCACTACCCAATCCAGCCTTTGCCGTaGGGGTCAATGTTCATCAAC | + |
Preference number: 5 (lower is better) Translates to: RLPTGLTPTHIRALAHYPIQPLP*GSMFIN Trigger: GTTGATGAACATTGACCCCAACGGCAAAGGCTGGAT...TGGGTAGTGAGCTAAAGCTCTGATGTGAGTGGGAGTCAGACCAGTGGGCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | TGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACATACATCATCCCCAGTCAGCTTCCCTGGTaGTGTCACCTGAGGAAGACC | + |
Preference number: 5 (lower is better) Translates to: CGCPLASEHPYNTTYIIPSQLPW*CHLRKT Trigger: GGTCTTCCTCAGGTGACACAACCAGGGAAGCTGACT...GGGGATGATGTATGTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | ACAGATAAATGGATGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACACCTCCATGGTGTGGTaGACCTGGCCCATCCCCTCA | + |
Preference number: 5 (lower is better) Translates to: TDKWMWVSSCLRTPIQYHTSMVW*TWPIPS Trigger: TGAGGGGATGGGCCAGGTCAACCACACCATGGAGGT...GTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACATCCATTTATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | TGTGGGTGTCCTCTTGCCTCAGAACACCCATACAATACCACATACATCATCCCCATCCAGCCTTTGCCGTaGGGGTCAATGTTCATCAAC | + |
Preference number: 5 (lower is better) Translates to: CGCPLASEHPYNTTYIIPIQPLP*GSMFIN Trigger: GTTGATGAACATTGACCCCAACGGCAAAGGCTGGAT...GGGGATGATGTATGTGGTATTGTATGGGTGTTCTGAGGCAAGAGGACACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | CAGTCTAGAAATGGCTTACAGTTACAGAAAGGGGCGGCATGTGCCACAGATAAACAGAAGAGCTGCAGGTaGGCCTGGTTCACCACGTTT | + |
Preference number: 5 (lower is better) Translates to: QSRNGLQLQKGAACATDKQKSCR*AWFTTF Trigger: AAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCTG...TTTATCTGTGGCACATGCCGCCCCTTTCTGTAACTGTAAGCCATTTCTAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | CATCTGTGTCTTTCTAACAAGCTCACTTCTCAAGTATTGTCTGTGACACACTGGCAGAAGAGCTGCAGGTaGGCCTGGTTCACCACGTTT | + |
Preference number: 5 (lower is better) Translates to: HLCLSNKLTSQVLSVTHWQKSCR*AWFTTF Trigger: AAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCTG...CCAGTGTGTCACAGACAATACTTGAGAAGTGAGCTTGTTAGAAAGACACAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | AAGAGAAGACAACTACCAATGGGAAACCACATACAGGAAGGAGGACCTGATATAAGGTCTCTGCGGCTGTaGTACATGTTCCAGAAGAGC | + |
Preference number: 5 (lower is better) Translates to: KRRQLPMGNHIQEGGPDIRSLRL*YMFQKS Trigger: GCTCTTCTGGAACATGTACAACAGCCGCAGAGACCT...TATATCAGGTCCTCCTTCCTGTATGTGGTTTCCCATTGGTAGTTGTCTTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS-3UTR CAA 90 bp | CATCTGTGTCTTTCTAACAAGCTCACTTCTCAAGTATTGTCTGTGACACACTGGATCCAGCCTTTGCCGTaGGGGTCAATGTTCATCAAC | + |
Preference number: 5 (lower is better) Translates to: HLCLSNKLTSQVLSVTHWIQPLP*GSMFIN Trigger: GTTGATGAACATTGACCCCAACGGCAAAGGCTGGAT...CCAGTGTGTCACAGACAATACTTGAGAAGTGAGCTTGTTAGAAAGACACAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000073139.14 ENSMUST00000080666.8 |
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CDS CCA 72 bp | GGGACGCGGTACGTGAGCGTGCGAGGCGGGTCATGCTaGCTGAGGGCATGTAGCCCATGCCTTGCAGGAAGT | + |
Preference number: 6 (lower is better) Translates to: GTRYVSVRGGSC*LRACSPCLAGS Trigger: ACTTCCTGCAAGGCATGGGCTACATGCCCTCAGCCAGCATGACCCGCCTCGCACGCTCACGTACCGCGTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080666.8 |
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CDS GCA 72 bp | CGGAGCAGGGGCTTCTCCTCAGGAAATCGCAGCTCCTaGAGCCCTGCCATGGTCACGTCGTGGAGCAGAAGC | + |
Preference number: 6 (lower is better) Translates to: RSRGFSSGNRSS*SPAMVTSWSRS Trigger: GCTTCTGCTCCACGACGTGACCATGGCAGGGCTGCAGGAGCTGCGATTTCCTGAGGAGAAGCCCCTGCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS CCA 72 bp | AATCGCAGCTCCTGCAGCCCTGCCATGGTCACGTCGTaGAGCAGAAGCCCTGTCAGCAGTTGGAGCCTGTGT | + |
Preference number: 6 (lower is better) Translates to: NRSSCSPAMVTS*SRSPVSSWSLC Trigger: ACACAGGCTCCAACTGCTGACAGGGCTTCTGCTCCACGACGTGACCATGGCAGGGCTGCAGGAGCTGCGATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000166358.8 |
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CDS CCA 72 bp | AGGAAGGCGTCAGGGTTATCCATCTCAGTGGCATCCTaGCCGCGGAGCAGGGGCTTCTCCTCAGGAAATCGC | + |
Preference number: 6 (lower is better) Translates to: RKASGLSISVAS*PRSRGFSSGNR Trigger: GCGATTTCCTGAGGAGAAGCCCCTGCTCCGCGGCCAGGATGCCACTGAGATGGATAACCCTGACGCCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000160964.8 ENSMUST00000166358.8 |
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CDS CCA 72 bp | CAATTGAGAGGAAGGCGTCAGGGTTATCCATCTCAGTaGCATCCTGGCCGCGGAGCAGGGGCTTCTCCTCAG | + |
Preference number: 6 (lower is better) Translates to: QLRGRRQGYPSQ*HPGRGAGASPQ Trigger: CTGAGGAGAAGCCCCTGCTCCGCGGCCAGGATGCCACTGAGATGGATAACCCTGACGCCTTCCTCTCAATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041318.14 ENSMUST00000160964.8 ENSMUST00000166358.8 |
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CDS CAA 90 bp | TGTGGGAGACAGATGGCACTGGACACTTCCAGTCTGTGTCCACAATaGAGAGGAAGGCGTCAGGGTTATCCATCTCAGTGGCATCCTGGC | + |
Preference number: 6 (lower is better) Translates to: CGRQMALDTSSLCPQ*RGRRQGYPSQWHPG Trigger: GCCAGGATGCCACTGAGATGGATAACCCTGACGCCTTCCTCTCAATTGTGGACACAGACTGGAAGTGTCCAGTGCCATCTGTCTCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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CDS TCA 72 bp | AGATGGCACTGGACACTTCCAGTCTGTGTCCACAATTaGGAGGAAGGCGTCAGGGTTATCCATCTCAGTGGC | + |
Preference number: 6 (lower is better) Translates to: RWHWTLPVCVHN*EEGVRVIHLSG Trigger: GCCACTGAGATGGATAACCCTGACGCCTTCCTCTCAATTGTGGACACAGACTGGAAGTGTCCAGTGCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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CDS CAA 72 bp | CAGATGGCACTGGACACTTCCAGTCTGTGTCCACAATaGAGAGGAAGGCGTCAGGGTTATCCATCTCAGTGG | + |
Preference number: 6 (lower is better) Translates to: QMALDTSSLCPQ*RGRRQGYPSQW Trigger: CCACTGAGATGGATAACCCTGACGCCTTCCTCTCAATTGTGGACACAGACTGGAAGTGTCCAGTGCCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166358.8 |
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CDS CAA 72 bp | TCTCGATGTCATGTTCCTTCCAGTCTGTGTCCACAATaGAGAGGAAGGCGTCAGGGTTATCCATCTCAGTGG | + |
Preference number: 6 (lower is better) Translates to: SRCHVPSSLCPQ*RGRRQGYPSQW Trigger: CCACTGAGATGGATAACCCTGACGCCTTCCTCTCAATTGTGGACACAGACTGGAAGGAACATGACATCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041318.14 ENSMUST00000160964.8 |