Pregenerated sensors for NDRG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004558Ensembl transcript IDs: ENSMUST00000004673.15, ENSMUST00000111632.5, ENSMUST00000226184.2, ENSMUST00000226528.2, ENSMUST00000227237.2, ENSMUST00000227402.2, ENSMUST00000228164.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAAGTTGTGTGAGACAGGAGGTCACGCTCTACACGTCACAGTATaGTCAGAGCCTGAGGTAGCTCTTCCCACCCTGATGCCAAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: QKLCETGGHALHVTV*SEPEVALPTLMPSP Trigger: GGGGCTTGGCATCAGGGTGGGAAGAGCTACCTCAGGCTCTGACCATACTGTGACGTGTAGAGCGTGACCTCCTGTCTCACACAACTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR CCA 90 bp | CCTTCAGAGAGGCCTGACACATCAAGGCAAAGCCACTGTCAGCTTTaGGGAAGGAGCTCCCCATCTCTCACCATCAACCCTACACACACA | + |
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Preference number: 1 (lower is better) Translates to: PSERPDTSRQSHCQL*GRSSPSLTINPTHT Trigger: TGTGTGTGTAGGGTTGATGGTGAGAGATGGGGAGCTCCTTCCCCAAAGCTGACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR GCA 90 bp | CACACACACACACACACAACACACACACACTCTCTCTCCTACCCTTaGAAATATGGGCTAAAGAGGGGGAGTGATGGAGGCCCCGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTTHTHSLSYP*KYGLKRGSDGGPVS Trigger: TGACACGGGGCCTCCATCACTCCCCCTCTTTAGCCCATATTTGCAAGGGTAGGAGAGAGAGTGTGTGTGTGTTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR TCA 90 bp | TCTCCTGATAAACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTaGCACATCAAGGCAAAGCCACTGTCAGCTTTGGGGAAGGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: SPDKHSFGTIAFREA*HIKAKPLSALGKEL Trigger: GAGCTCCTTCCCCAAAGCTGACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTTTATCAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR CCA 90 bp | CAAGGTCATCTCCCTGCACAATCTGCCCATTTTCCTTGCTTACTCTaGCCCAGTGCCCTGATAACACCTCTTAAATTAGTGTTGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: QGHLPAQSAHFPCLL*PSALITPLKLVLQE Trigger: CTCCTGCAACACTAATTTAAGAGGTGTTATCAGGGCACTGGGCCAGAGTAAGCAAGGAAAATGGGCAGATTGTGCAGGGAGATGACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR GCA 90 bp | ATTAAAGATCAAGGTCATCTCCCTGCACAATCTGCCCATTTTCCTTaGTTACTCTGGCCCAGTGCCCTGATAACACCTCTTAAATTAGTG | + |
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Preference number: 1 (lower is better) Translates to: IKDQGHLPAQSAHFP*LLWPSALITPLKLV Trigger: CACTAATTTAAGAGGTGTTATCAGGGCACTGGGCCAGAGTAAGCAAGGAAAATGGGCAGATTGTGCAGGGAGATGACCTTGATCTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR TCA 90 bp | CCTTTCTTTTTACATGCTGGATATTTCTATCACATTAAGGATCACTaGCCCACCAGCAAACCTTCTCCTGATAAACATTCATTTGGGACT | + |
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Preference number: 1 (lower is better) Translates to: PFFLHAGYFYHIKDH*PTSKPSPDKHSFGT Trigger: AGTCCCAAATGAATGTTTATCAGGAGAAGGTTTGCTGGTGGGTCAGTGATCCTTAATGTGATAGAAATATCCAGCATGTAAAAAGAAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTGTGAGACAGGAGGTCACGCTCTACACGTCACAGTATGGTCAGAGCCTGGCAGGAGGTGAGGGCTaGGATCCACACCAAGGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SCVRQEVTLYTSQYGQSLAGGEG*DPHQGN Trigger: ATTGCCTTGGTGTGGATCCCAGCCCTCACCTCCTGC...CAGGCTCTGACCATACTGTGACGTGTAGAGCGTGACCTCCTGTCTCACACAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCTCCCTTCTACCCCAGCTTCAATGTGTTTACCACTGTTCTTCACGGGCCTCAAGGTCATCTCCCTaGACAATCTGCCCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GPSLLPQLQCVYHCSSRASRSSP*TICPFS Trigger: GGAAAATGGGCAGATTGTGCAGGGAGATGACCTTGA...GGCCCGTGAAGAACAGTGGTAAACACATTGAAGCTGGGGTAGAAGGGAGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCTCCCTTCTACCCCAGCTTCAATGTGTTTACCACTGTTCTTCACGGGCCTTCATTTGGGACTATTaGCTTCAGAGAGGCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: GPSLLPQLQCVYHCSSRAFIWDY*LQRGLT Trigger: TGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAA...GGCCCGTGAAGAACAGTGGTAAACACATTGAAGCTGGGGTAGAAGGGAGGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CCA 90 bp | ACCACTGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATGCAGGAGGTGAGGGCTaGGATCCACACCAAGGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: TTVLHGPPSPILSFYMLDAGGEG*DPHQGN Trigger: ATTGCCTTGGTGTGGATCCCAGCCCTCACCTCCTGC...ATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACAGTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR GCA 90 bp | CCCGTGTCAGCTAGAACAGCTCATTGTTCCTCATCTATAGAACCTAGGTCAGGGTCTGCCCATTTTCCTTaGTTACTCTGGCCCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PVSARTAHCSSSIEPRSGSAHFP*LLWPSA Trigger: GGCACTGGGCCAGAGTAAGCAAGGAAAATGGGCAGA...CCCTGACCTAGGTTCTATAGATGAGGAACAATGAGCTGTTCTAGCTGACACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CCA 90 bp | CAACCCTACACACACACACACACACACACAACACACACACACTCTCTCTCCTACTTTCCTTGCTTACTCTaGCCCAGTGCCCTGATAACA | + |
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Preference number: 2 (lower is better) Translates to: QPYTHTHTHTTHTHSLSYFPCLL*PSALIT Trigger: TGTTATCAGGGCACTGGGCCAGAGTAAGCAAGGAAA...GTAGGAGAGAGAGTGTGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTAGGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR CAA 90 bp | AGGATCACTGACCCACCAGCAAACCTTCTCCTGATAAACATTCATTaGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: RITDPPANLLLINIH*GLLPSERPDTSRQS Trigger: GCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTTTATCAGGAGAAGGTTTGCTGGTGGGTCAGTGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR GCA 90 bp | TCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCTATCACTCTGCCCATTTTCCTTaGTTACTCTGGCCCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SRATISHPFFLHAGYFYHSAHFP*LLWPSA Trigger: GGCACTGGGCCAGAGTAAGCAAGGAAAATGGGCAGA...GTGATAGAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCGTGTCAGCTAGAACAGCTCATTGTTCCTCATCTATAGAACCTAGGTCATCTCCCTGCACAATCTaGCCATTTTCCTTGCTTACT | + |
|
Preference number: 2 (lower is better) Translates to: GPVSARTAHCSSSIEPRSSPCTI*PFSLLT Trigger: AGTAAGCAAGGAAAATGGGCAGATTGTGCAGGGAGA...TGACCTAGGTTCTATAGATGAGGAACAATGAGCTGTTCTAGCTGACACGGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCCACTTTCCTTGCTTACTCTaGCCCAGTGCCCTGATAACA | + |
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Preference number: 2 (lower is better) Translates to: IHLGLLPSERPDTSRQSHFPCLL*PSALIT Trigger: TGTTATCAGGGCACTGGGCCAGAGTAAGCAAGGAAA...GTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR GCA 90 bp | AACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCTCTCCCTGCACAATCTaGCCATTTTCCTTGCTTACT | + |
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Preference number: 2 (lower is better) Translates to: NIHLGLLPSERPDTSRQSSPCTI*PFSLLT Trigger: AGTAAGCAAGGAAAATGGGCAGATTGTGCAGGGAGA...GCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR CAA 90 bp | ACAATGCTGTTCAGTTTCCTCTATAGTTTATTGTCACAGCAGAAGTaGTGTGAGACAGGAGGTCACGCTCTACACGTCACAGTATGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TMLFSFLYSLLSQQK*CETGGHALHVTVWS Trigger: TGACCATACTGTGACGTGTAGAGCGTGACCTCCTGTCTCACACAACTTCTGCTGTGACAATAAACTATAGAGGAAACTGAACAGCATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004673.15 |
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| 3UTR TCA 72 bp | AGGTCACGCTCTACACGTCACAGTATGGTCAGAGCCTaGGGTAGCTCTTCCCACCCTGATGCCAAGCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: RSRSTRHSMVRA*GSSSHPDAKPQ Trigger: TTGGGGCTTGGCATCAGGGTGGGAAGAGCTACCTCAGGCTCTGACCATACTGTGACGTGTAGAGCGTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR CCA 72 bp | AGGCCTGACACATCAAGGCAAAGCCACTGTCAGCTTTaGGGAAGGAGCTCCCCATCTCTCACCATCAACCCT | + |
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Preference number: 3 (lower is better) Translates to: RPDTSRQSHCQL*GRSSPSLTINP Trigger: AGGGTTGATGGTGAGAGATGGGGAGCTCCTTCCCCAAAGCTGACAGTGGCTTTGCCTTGATGTGTCAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CAA 90 bp | CCACTGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATAAAGCCACTGTCAGCTTaGGGGAAGGAGCTCCCCATC | + |
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Preference number: 3 (lower is better) Translates to: PLFFTGHHLPSFLFTCWIKPLSA*GKELPI Trigger: GATGGGGAGCTCCTTCCCCAAAGCTGACAGTGGCTT...TATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CAA 90 bp | CATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCCACTGTCCTCTTAAATTAGTGTaGCAGGAGGTGAGGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: HLGLLPSERPDTSRQSHCPLKLV*QEVRAG Trigger: CCCAGCCCTCACCTCCTGCAACACTAATTTAAGAGG...ACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CAA 90 bp | TTGTGTGAGACAGGAGGTCACGCTCTACACGTCACAGTATGGTCAGAGCCTGAGATTCATTTGGGACTATaGCCTTCAGAGAGGCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: LCETGGHALHVTVWSEPEIHLGL*PSERPD Trigger: GTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAAT...CTCAGGCTCTGACCATACTGTGACGTGTAGAGCGTGACCTCCTGTCTCACACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR GCA 72 bp | CAAGGTCATCTCCCTGCACAATCTGCCCATTTTCCTTaGTTACTCTGGCCCAGTGCCCTGATAACACCTCTT | + |
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Preference number: 3 (lower is better) Translates to: QGHLPAQSAHFP*LLWPSALITPL Trigger: AAGAGGTGTTATCAGGGCACTGGGCCAGAGTAAGCAAGGAAAATGGGCAGATTGTGCAGGGAGATGACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR TCA 72 bp | AAACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTaGCACATCAAGGCAAAGCCACTGTCAGCTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: KHSFGTIAFREA*HIKAKPLSALG Trigger: CCCCAAAGCTGACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR CCA 72 bp | CTCCCTGCACAATCTGCCCATTTTCCTTGCTTACTCTaGCCCAGTGCCCTGATAACACCTCTTAAATTAGTG | + |
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Preference number: 3 (lower is better) Translates to: LPAQSAHFPCLL*PSALITPLKLV Trigger: CACTAATTTAAGAGGTGTTATCAGGGCACTGGGCCAGAGTAAGCAAGGAAAATGGGCAGATTGTGCAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CAA 90 bp | ACTGACCCACCAGCAAACCTTCTCCTGATAAACATTCATTTGGGACTATTGCCTCCTCTTAAATTAGTGTaGCAGGAGGTGAGGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: TDPPANLLLINIHLGLLPPLKLV*QEVRAG Trigger: CCCAGCCCTCACCTCCTGCAACACTAATTTAAGAGG...AGGCAATAGTCCCAAATGAATGTTTATCAGGAGAAGGTTTGCTGGTGGGTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CAA 90 bp | AGATCTCTAAGAGATATTAGGACACCTCACCTAGGAGCTAGAGGATATCACAGGATCTGCCCATTTTCCTaGCTTACTCTGGCCCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: RSLRDIRTPHLGARGYHRICPFS*LTLAQC Trigger: GCACTGGGCCAGAGTAAGCAAGGAAAATGGGCAGAT...CCTGTGATATCCTCTAGCTCCTAGGTGAGGTGTCCTAATATCTCTTAGAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCTGATAAACATTCATTaGGGACTATTGCCTTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LFFTGHHLPSFLFTCWIFLINIH*GLLPSE Trigger: CTCTGAAGGCAATAGTCCCAAATGAATGTTTATCAG...AAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCCTGATAAACATTCATTaGGGACTATTGCCTTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: CSSRATISHPFFLHAGYFLINIH*GLLPSE Trigger: CTCTGAAGGCAATAGTCCCAAATGAATGTTTATCAG...GAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| 3UTR TCA 72 bp | TTACATGCTGGATATTTCTATCACATTAAGGATCACTaGCCCACCAGCAAACCTTCTCCTGATAAACATTCA | + |
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Preference number: 3 (lower is better) Translates to: LHAGYFYHIKDH*PTSKPSPDKHS Trigger: TGAATGTTTATCAGGAGAAGGTTTGCTGGTGGGTCAGTGATCCTTAATGTGATAGAAATATCCAGCATGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR GCA 90 bp | GCCCTGATAACACCTCTTAAATTAGTGTTGCAGGAGGTGAGGGCTGGGATCCACCCAGACTCGCTACTCTaGGACAGGGTGCGGGATCGG | + |
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Preference number: 4 (lower is better) Translates to: ALITPLKLVLQEVRAGIHPDSLL*DRVRDR Trigger: CCGATCCCGCACCCTGTCGCAGAGTAGCGAGTCTGG...GTGGATCCCAGCCCTCACCTCCTGCAACACTAATTTAAGAGGTGTTATCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR TCA 90 bp | GCTCCCCATCTCTCACCATCAACCCTACACACACACACACACACACACAACACAGCATCACAGGGCACTTaGGGGTCGTCTCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: APHLSPSTLHTHTHTHNTASQGT*GSSHHL Trigger: GAGGTGGTGAGACGACCCTCAAGTGCCCTGTGATGC...TGTGTTGTGTGTGTGTGTGTGTGTGTGTAGGGTTGATGGTGAGAGATGGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR GCA 90 bp | CAACCCTACACACACACACACACACACACAACACACACACACTCTCTCTCCTACCCTGGTCCAGGAGGATaGGGGCAGCTAACTCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QPYTHTHTHTTHTHSLSYPGPGG*GQLTRP Trigger: AGGCCGAGTTAGCTGCCCGCATCCTCCTGGACCAGG...GTAGGAGAGAGAGTGTGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTAGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004673.15 |
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| CDS-3UTR GCA 90 bp | GGCCCCTCCCTTCTACCCCAGCTTCAATGTGTTTACCACTGTTCTTCACGGGCCGGCATCTTCATGAGGTaGTTGGTCTCCAACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: GPSLLPQLQCVYHCSSRAGIFMR*LVSNHQ Trigger: CTGGTGGTTGGAGACCAAGCACCTCATGAAGATGCC...GGCCCGTGAAGAACAGTGGTAAACACATTGAAGCTGGGGTAGAAGGGAGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR GCA 90 bp | GGCCCCTCCCTTCTACCCCAGCTTCAATGTGTTTACCACTGTTCTTCACGGGCCGAGATAGGCGAGTCATaGAGGAAGAGGCCATGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GPSLLPQLQCVYHCSSRAEIGES*RKRPCS Trigger: GCTACATGGCCTCTTCCTGCATGACTCGCCTATCTC...GGCCCGTGAAGAACAGTGGTAAACACATTGAAGCTGGGGTAGAAGGGAGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR GCA 90 bp | GGCCCCGTGTCAGCTAGAACAGCTCATTGTTCCTCATCTATAGAACCTAGGTCACCAGACTCGCTACTCTaGGACAGGGTGCGGGATCGG | + |
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Preference number: 4 (lower is better) Translates to: GPVSARTAHCSSSIEPRSPDSLL*DRVRDR Trigger: CCGATCCCGCACCCTGTCGCAGAGTAGCGAGTCTGG...TGACCTAGGTTCTATAGATGAGGAACAATGAGCTGTTCTAGCTGACACGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CCA 90 bp | CAAAGCCACTGTCAGCTTTGGGGAAGGAGCTCCCCATCTCTCACCATCAACCCTAGGCCAGTTAACTTGTaGGCTGCCCAGTCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: QSHCQLWGRSSPSLTINPRPVNL*AAQSIQ Trigger: CTGGATGGACTGGGCAGCCCACAAGTTAACTGGCCT...AGGGTTGATGGTGAGAGATGGGGAGCTCCTTCCCCAAAGCTGACAGTGGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CCA 90 bp | CAACCCTACACACACACACACACACACACAACACACACACACTCTCTCTCCTACGGGCTGAGTCAGCTGTaGCTGACCTCCAGAGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: QPYTHTHTHTTHTHSLSYGLSQL*LTSRVG Trigger: GCCGACTCTGGAGGTCAGCCACAGCTGACTCAGCCC...GTAGGAGAGAGAGTGTGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTAGGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR TCA 90 bp | GCTCCCCATCTCTCACCATCAACCCTACACACACACACACACACACACAACACAGCGGCTTCTCCTCGGTaGTCTGCACCTCCTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: APHLSPSTLHTHTHTHNTAASPR*SAPPEV Trigger: AACTTCAGGAGGTGCAGATCACCGAGGAGAAGCCGC...TGTGTTGTGTGTGTGTGTGTGTGTGTGTAGGGTTGATGGTGAGAGATGGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR TCA 90 bp | AGGAGCTCCCCATCTCTCACCATCAACCCTACACACACACACACACACACACAACCAGGGGCATCCACATaGACCCGCACGAAGTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RSSPSLTINPTHTHTHTQPGAST*TRTKFC Trigger: ACAGAACTTCGTGCGGGTTCATGTGGATGCCCCTGG...TTGTGTGTGTGTGTGTGTGTGTGTAGGGTTGATGGTGAGAGATGGGGAGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR TCA 90 bp | GAGCTCCCCATCTCTCACCATCAACCCTACACACACACACACACACACACAACAGGTGTCTCCACAGAGTaGGTCTTGGCAGTCTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: ELPISHHQPYTHTHTHTTGVSTE*VLAVSG Trigger: ACCCGAGACTGCCAAGACTCACTCTGTGGAGACACC...TGTTGTGTGTGTGTGTGTGTGTGTGTAGGGTTGATGGTGAGAGATGGGGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111632.5 |
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| CDS-3UTR CCA 90 bp | AGTTGTGTGAGACAGGAGGTCACGCTCTACACGTCACAGTATGGTCAGAGCCTGACCGACTGCCATCGATaGATGCTGCACTGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SCVRQEVTLYTSQYGQSLTDCHR*MLHWSE Trigger: CTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGT...CAGGCTCTGACCATACTGTGACGTGTAGAGCGTGACCTCCTGTCTCACACAACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CCA 90 bp | AGGAGCTCCCCATCTCTCACCATCAACCCTACACACACACACACACACACACAATTCCATGGTGTGCCCTaGGGGTCCAGAAGGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSSPSLTINPTHTHTHTQFHGVP*GSRRES Trigger: ACTCTCCCTTCTGGACCCCCAGGGCACACCATGGAA...TTGTGTGTGTGTGTGTGTGTGTGTAGGGTTGATGGTGAGAGATGGGGAGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | ATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCCACTGTCGCGGCTTCTCCTCGGTaGTCTGCACCTCCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IWDYCLQRGLTHQGKATVAASPR*SAPPEV Trigger: AACTTCAGGAGGTGCAGATCACCGAGGAGAAGCCGC...GACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | AGGAGCTCCCCATCTCTCACCATCAACCCTACACACACACACACACACACACAAACCACGGCATCTTCATaGGGTGCTTGGTCTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RSSPSLTINPTHTHTHTQTTASS*GAWSPT Trigger: GGTTGGAGACCAAGCACCTCATGAAGATGCCGTGGT...TTGTGTGTGTGTGTGTGTGTGTGTAGGGTTGATGGTGAGAGATGGGGAGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | CAACCCTACACACACACACACACACACACAACACACACACACTCTCTCTCCTACCTCGGGTGTTTGTCCTaGCAACAGCGGCTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPYTHTHTHTTHTHSLSYLGCLS*QQRLLL Trigger: GAGGAGAAGCCGCTGTTGCCAGGACAAACACCCGAG...GTAGGAGAGAGAGTGTGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTAGGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | ACAACACACACACACTCTCTCTCCTACCCTTGCAAATATGGGCTAAAGAGGGGGCTCGGGTGTTTGTCCTaGCAACAGCGGCTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTHTHSLSYPCKYGLKRGLGCLS*QQRLLL Trigger: GAGGAGAAGCCGCTGTTGCCAGGACAAACACCCGAG...CCCCCTCTTTAGCCCATATTTGCAAGGGTAGGAGAGAGAGTGTGTGTGTGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | CATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCCACTGTTTCCATGGTGTGCCCTaGGGGTCCAGAAGGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLGLLPSERPDTSRQSHCFHGVP*GSRRES Trigger: ACTCTCCCTTCTGGACCCCCAGGGCACACCATGGAA...ACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | CACTGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATGCATCACAGGGCACTTaGGGGTCGTCTCACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCSSRATISHPFFLHAGYASQGT*GSSHHL Trigger: GAGGTGGTGAGACGACCCTCAAGTGCCCTGTGATGC...ATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | AGTTGTGTGAGACAGGAGGTCACGCTCTACACGTCACAGTATGGTCAGAGCCTGGTTCTCCAGGTTGGGTaGGTGTTGGATGATACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCVRQEVTLYTSQYGQSLVLQVG*VLDDTS Trigger: AGAGGTATCATCCAACACGCACCCAACCTGGAGAAC...CAGGCTCTGACCATACTGTGACGTGTAGAGCGTGACCTCCTGTCTCACACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCTGGGCTGAGTCAGCTGTaGCTGACCTCCAGAGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLHGPPSPILSFYMLDISGLSQL*LTSRVG Trigger: GCCGACTCTGGAGGTCAGCCACAGCTGACTCAGCCC...AGAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTGCGCCCCCTCTTCCATaGCAGGGGCATCCACATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFFTGHHLPSFLFTCWIFAPPLP*QGHPHE Trigger: TTCATGTGGATGCCCCTGGCATGGAAGAGGGGGCGC...AAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | AACCTTCTCCTGATAAACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACGCGCCCCCTCTTCCATaGCAGGGGCATCCACATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLLLINIHLGLLPSERPDAPPLP*QGHPHE Trigger: TTCATGTGGATGCCCCTGGCATGGAAGAGGGGGCGC...GTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTTTATCAGGAGAAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | GGCCCCGTGTCAGCTAGAACAGCTCATTGTTCCTCATCTATAGAACCTAGGTCAGGCATCTTCATGAGGTaGTTGGTCTCCAACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPVSARTAHCSSSIEPRSGIFMR*LVSNHQ Trigger: CTGGTGGTTGGAGACCAAGCACCTCATGAAGATGCC...TGACCTAGGTTCTATAGATGAGGAACAATGAGCTGTTCTAGCTGACACGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | CCCGTGTCAGCTAGAACAGCTCATTGTTCCTCATCTATAGAACCTAGGTCAGGGGAGATAGGCGAGTCATaGAGGAAGAGGCCATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSARTAHCSSSIEPRSGEIGES*RKRPCS Trigger: GCTACATGGCCTCTTCCTGCATGACTCGCCTATCTC...CCCTGACCTAGGTTCTATAGATGAGGAACAATGAGCTGTTCTAGCTGACACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | ACCACTGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATATCGCCGGGCGTTTaGGTTTGGGGGTGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: TTVLHGPPSPILSFYMLDISPGV*VWGCHT Trigger: TGTATGGCACCCCCAAACCCAAACGCCCGGCGATAT...ATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACAGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATAACCGACTGCCATCGATaGATGCTGCACTGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLFFTGHHLPSFLFTCWITDCHR*MLHWSE Trigger: CTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGT...TATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| 3UTR CAA 72 bp | TCAAGGTCATCTCCCTGCACAATCTGCCCATTTTCCTaGCTTACTCTGGCCCAGTGCCCTGATAACACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSPCTICPFS*LTLAQCPDNTS Trigger: AGAGGTGTTATCAGGGCACTGGGCCAGAGTAAGCAAGGAAAATGGGCAGATTGTGCAGGGAGATGACCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | AACCTTCTCCTGATAAACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACCCAGGGGCATCCACATaGACCCGCACGAAGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLLLINIHLGLLPSERPDPGAST*TRTKFC Trigger: ACAGAACTTCGTGCGGGTTCATGTGGATGCCCCTGG...GTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTTTATCAGGAGAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | AACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCTGTGGGGTCCAGCTTTaGGTTACATTCCACCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: NIHLGLLPSERPDTSRQSCGVQL*VTFHHG Trigger: GCCGTGGTGGAATGTAACTCAAAGCTGGACCCCACA...GCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | CAGAAGTTGTGTGAGACAGGAGGTCACGCTCTACACGTCACAGTATGGTCAGAGCCCGAACCGAAACAGTaGCTGGAAGCAAGACTTATA | + |
|
Preference number: 4 (lower is better) Translates to: QKLCETGGHALHVTVWSEPEPKQ*LEARLI Trigger: TATAAGTCTTGCTTCCAGCCACTGTTTCGGTTCGGG...CTCTGACCATACTGTGACGTGTAGAGCGTGACCTCCTGTCTCACACAACTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | AACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCCGATGGATGCTGCACTaGTCAGAGATGCTGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NIHLGLLPSERPDTSRQSRWMLH*SEMLCE Trigger: CTCGCACAGCATCTCTGACCAGTGCAGCATCCATCG...GCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | CTGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTACCACGGCATCTTCATaGGGTGCTTGGTCTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LFFTGHHLPSFLFTCWIFTTASS*GAWSPT Trigger: GGTTGGAGACCAAGCACCTCATGAAGATGCCGTGGT...AAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | AACCTTCTCCTGATAAACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACTGTGGGGTCCAGCTTTaGGTTACATTCCACCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLLLINIHLGLLPSERPDCGVQL*VTFHHG Trigger: GCCGTGGTGGAATGTAACTCAAAGCTGGACCCCACA...GTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTTTATCAGGAGAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | AACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCACTGCCATCGATGGATaGTGCACTGGTCAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NIHLGLLPSERPDTSRQSTAIDG*CTGQRC Trigger: GCATCTCTGACCAGTGCAGCATCCATCGATGGCAGT...GCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCATATCGCCGGGCGTTTaGGTTTGGGGGTGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: CSSRATISHPFFLHAGYFISPGV*VWGCHT Trigger: TGTATGGCACCCCCAAACCCAAACGCCCGGCGATAT...GAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGCTCCCCATCTCTCACCATCAACCCTACACACACACACACACACACACAACCAGAAAGCTCTTCCTaGCTGAAAAGATGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSSPSLTINPTHTHTHTQPESSS*LKRCPR Trigger: TCTTGGACATCTTTTCAGCCAGGAAGAGCTTTCTGG...TTGTGTGTGTGTGTGTGTGTGTGTAGGGTTGATGGTGAGAGATGGGGAGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | ACTGACCCACCAGCAAACCTTCTCCTGATAAACATTCATTTGGGACTATTGCCTCGATGGATGCTGCACTaGTCAGAGATGCTGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDPPANLLLINIHLGLLPRWMLH*SEMLCE Trigger: CTCGCACAGCATCTCTGACCAGTGCAGCATCCATCG...AGGCAATAGTCCCAAATGAATGTTTATCAGGAGAAGGTTTGCTGGTGGGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | CCCGTGTCAGCTAGAACAGCTCATTGTTCCTCATCTATAGAACCTAGGTCAGGGTGGGTGCGTGTTGGATaGTACCTCTGTACTTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PVSARTAHCSSSIEPRSGWVRVG*YLCTFV Trigger: TACAAAAGTACAGAGGTATCATCCAACACGCACCCA...CCCTGACCTAGGTTCTATAGATGAGGAACAATGAGCTGTTCTAGCTGACACGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | ATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCCACTGTCTGGGTGCGTGTTGGATaGTACCTCTGTACTTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IWDYCLQRGLTHQGKATVWVRVG*YLCTFV Trigger: TACAAAAGTACAGAGGTATCATCCAACACGCACCCA...GACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTGCCATCGATGGATGCTaGACTGGTCAGAGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFFTGHHLPSFLFTCWIFAIDGC*TGQRCC Trigger: ACAGCATCTCTGACCAGTGCAGCATCCATCGATGGC...AAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | AGATCTCTAAGAGATATTAGGACACCTCACCTAGGAGCTAGAGGATATCACAGGACTGCCATCGATGGATaGTGCACTGGTCAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLRDIRTPHLGARGYHRTAIDG*CTGQRC Trigger: GCATCTCTGACCAGTGCAGCATCCATCGATGGCAGT...CCTGTGATATCCTCTAGCTCCTAGGTGAGGTGTCCTAATATCTCTTAGAGATCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | ACAACACACACACACTCTCTCTCCTACCCTTGCAAATATGGGCTAAAGAGGGGGAGGTTGGGTGCGTGTTaGATGATACCTCTGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TTHTHSLSYPCKYGLKRGRLGAC*MIPLYF Trigger: AAAGTACAGAGGTATCATCCAACACGCACCCAACCT...CCCCCTCTTTAGCCCATATTTGCAAGGGTAGGAGAGAGAGTGTGTGTGTGTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR TCA 90 bp | CCCGTGTCAGCTAGAACAGCTCATTGTTCCTCATCTATAGAACCTAGGTCAGGGAAAGCTCTTCCTGGCTaGAAAGATGTCCAAGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSARTAHCSSSIEPRSGKALPG*KDVQES Trigger: TGATTCTTGGACATCTTTTCAGCCAGGAAGAGCTTT...CCCTGACCTAGGTTCTATAGATGAGGAACAATGAGCTGTTCTAGCTGACACGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | AGATCTCTAAGAGATATTAGGACACCTCACCTAGGAGCTAGAGGATATCACAGGGTTCTCCAGGTTGGGTaGGTGTTGGATGATACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLRDIRTPHLGARGYHRVLQVG*VLDDTS Trigger: AGAGGTATCATCCAACACGCACCCAACCTGGAGAAC...CCTGTGATATCCTCTAGCTCCTAGGTGAGGTGTCCTAATATCTCTTAGAGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR GCA 90 bp | TCATCTATAGAACCTAGGTCAGGGAGAGAACATACAAGCCTTCTCAACACCAAAGCCATCGATGGATGCTaGACTGGTCAGAGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSIEPRSGREHTSLLNTKAIDGC*TGQRCC Trigger: ACAGCATCTCTGACCAGTGCAGCATCCATCGATGGC...TTTGGTGTTGAGAAGGCTTGTATGTTCTCTCCCTGACCTAGGTTCTATAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| 3UTR CAA 72 bp | GACCCACCAGCAAACCTTCTCCTGATAAACATTCATTaGGGACTATTGCCTTCAGAGAGGCCTGACACATCA | + |
|
Preference number: 4 (lower is better) Translates to: DPPANLLLINIH*GLLPSERPDTS Trigger: TGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTTTATCAGGAGAAGGTTTGCTGGTGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCCCAGAAAGCTCTTCCTaGCTGAAAAGATGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSSRATISHPFFLHAGYFPESSS*LKRCPR Trigger: TCTTGGACATCTTTTCAGCCAGGAAGAGCTTTCTGG...GAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CCA 90 bp | CATTGTTCCTCATCTATAGAACCTAGGTCAGGGAGAGAACATACAAGCCTTCTCAGGTTGGGTGCGTGTTaGATGATACCTCTGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HCSSSIEPRSGREHTSLLRLGAC*MIPLYF Trigger: AAAGTACAGAGGTATCATCCAACACGCACCCAACCT...GAGAAGGCTTGTATGTTCTCTCCCTGACCTAGGTTCTATAGATGAGGAACAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| 3UTR CAA 72 bp | TTCAGTTTCCTCTATAGTTTATTGTCACAGCAGAAGTaGTGTGAGACAGGAGGTCACGCTCTACACGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FSFLYSLLSQQK*CETGGHALHVT Trigger: TGTGACGTGTAGAGCGTGACCTCCTGTCTCACACAACTTCTGCTGTGACAATAAACTATAGAGGAAACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004673.15 |
||
| CDS GCA 90 bp | GTGTGCCCTGGGGGTCCAGAAGGGAGAGTCCCAGACTCGCTACTCTaGGACAGGGTGCGGGATCGGGACCGACTGCCATCGATGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VCPGGPEGRVPDSLL*DRVRDRDRLPSMDA Trigger: AGCATCCATCGATGGCAGTCGGTCCCGATCCCGCACCCTGTCGCAGAGTAGCGAGTCTGGGACTCTCCCTTCTGGACCCCCAGGGCACAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS GCA 90 bp | GGGGTCCAGAAGGGAGAGTCCCAGACTCGCTACTCTGCGACAGGGTaGGGGATCGGGACCGACTGCCATCGATGGATGCTGCACTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVQKGESQTRYSATG*GIGTDCHRWMLHWS Trigger: TGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCCGATCCCGCACCCTGTCGCAGAGTAGCGAGTCTGGGACTCTCCCTTCTGGACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS GCA 90 bp | TCCCAGACTCGCTACTCTGCGACAGGGTGCGGGATCGGGACCGACTaGCATCGATGGATGCTGCACTGGTCAGAGATGCTGTGCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SQTRYSATGCGIGTD*HRWMLHWSEMLCET Trigger: GGTCTCGCACAGCATCTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCCGATCCCGCACCCTGTCGCAGAGTAGCGAGTCTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS CCA 90 bp | CGCTACTCTGCGACAGGGTGCGGGATCGGGACCGACTGCCATCGATaGATGCTGCACTGGTCAGAGATGCTGTGCGAGACCGAGATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RYSATGCGIGTDCHR*MLHWSEMLCETEIG Trigger: GCCTATCTCGGTCTCGCACAGCATCTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCCGATCCCGCACCCTGTCGCAGAGTAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS CCA 90 bp | ACAGGGTGCGGGATCGGGACCGACTGCCATCGATGGATGCTGCACTaGTCAGAGATGCTGTGCGAGACCGAGATAGGCGAGTCATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGCGIGTDCHRWMLH*SEMLCETEIGESCR Trigger: CCTGCATGACTCGCCTATCTCGGTCTCGCACAGCATCTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCCGATCCCGCACCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS GCA 90 bp | GGGACCGACTGCCATCGATGGATGCTGCACTGGTCAGAGATGCTGTaGGAGACCGAGATAGGCGAGTCATGCAGGAAGAGGCCATGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTDCHRWMLHWSEML*ETEIGESCRKRPCS Trigger: GCTACATGGCCTCTTCCTGCATGACTCGCCTATCTCGGTCTCGCACAGCATCTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
||
| CDS-3UTR CAA 90 bp | GGCCCCTCCCTTCTACCCCAGCTTCAATGTGTTTACCACTGTTCTTCACGGGCCGCCGGGCGTTTGGGTTaGGGGGTGCCATACACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GPSLLPQLQCVYHCSSRAAGRLG*GVPYTV Trigger: TACTGTGTATGGCACCCCCAAACCCAAACGCCCGGC...GGCCCGTGAAGAACAGTGGTAAACACATTGAAGCTGGGGTAGAAGGGAGGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS CCA 90 bp | AGGTGTCTCCACAGAGTGAGTCTTGGCAGTCTCGGGTGTTTGTCCTaGCAACAGCGGCTTCTCCTCGGTGATCTGCACCTCCTGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: RCLHRVSLGSLGCLS*QQRLLLGDLHLLKF Trigger: GAACTTCAGGAGGTGCAGATCACCGAGGAGAAGCCGCTGTTGCCAGGACAAACACCCGAGACTGCCAAGACTCACTCTGTGGAGACACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111632.5 ENSMUST00000226528.2 ENSMUST00000227237.2 ENSMUST00000228164.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGTTGTGTGAGACAGGAGGTCACGCTCTACACGTCACAGTATGGTCAGAGCCAGAGTCGGCCATCTaGAGGAACGAGGTCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: QKLCETGGHALHVTVWSEPESAI*RNEVCV Trigger: CACACAGACCTCGTTCCTCAAGATGGCCGACTCTGG...CTCTGACCATACTGTGACGTGTAGAGCGTGACCTCCTGTCTCACACAACTTCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | AACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCGCCGGGCGTTTGGGTTaGGGGGTGCCATACACAGTA | + |
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Preference number: 5 (lower is better) Translates to: NIHLGLLPSERPDTSRQSAGRLG*GVPYTV Trigger: TACTGTGTATGGCACCCCCAAACCCAAACGCCCGGC...GCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | CATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCCACTGTGTGTGGGGTCCAGCTTaGAGTTACATTCCACCACGG | + |
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Preference number: 5 (lower is better) Translates to: HLGLLPSERPDTSRQSHCVWGPA*SYIPPR Trigger: CCGTGGTGGAATGTAACTCAAAGCTGGACCCCACAC...ACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | GTGTCAGCTAGAACAGCTCATTGTTCCTCATCTATAGAACCTAGGTCAGGGAGACCAGAGTCGGCCATCTaGAGGAACGAGGTCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: VSARTAHCSSSIEPRSGRPESAI*RNEVCV Trigger: CACACAGACCTCGTTCCTCAAGATGGCCGACTCTGG...TCTCCCTGACCTAGGTTCTATAGATGAGGAACAATGAGCTGTTCTAGCTGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | TCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCTATCACAATATCGCCGGGCGTTaGGGTTTGGGGGTGCCATAC | + |
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Preference number: 5 (lower is better) Translates to: SRATISHPFFLHAGYFYHNIAGR*GLGVPY Trigger: GTATGGCACCCCCAAACCCAAACGCCCGGCGATATT...GTGATAGAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | ATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCCACTGTCCAGGTTGGGTGCGTGTaGGATGATACCTCTGTACTT | + |
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Preference number: 5 (lower is better) Translates to: IWDYCLQRGLTHQGKATVQVGCV*DDTSVL Trigger: AAGTACAGAGGTATCATCCAACACGCACCCAACCTG...GACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | TCATCTATAGAACCTAGGTCAGGGAGAGAACATACAAGCCTTCTCAACACCAAAAATATCGCCGGGCGTTaGGGTTTGGGGGTGCCATAC | + |
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Preference number: 5 (lower is better) Translates to: SSIEPRSGREHTSLLNTKNIAGR*GLGVPY Trigger: GTATGGCACCCCCAAACCCAAACGCCCGGCGATATT...TTTGGTGTTGAGAAGGCTTGTATGTTCTCTCCCTGACCTAGGTTCTATAGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | TGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCGTGTGGGGTCCAGCTTaGAGTTACATTCCACCACGG | + |
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Preference number: 5 (lower is better) Translates to: CSSRATISHPFFLHAGYFVWGPA*SYIPPR Trigger: CCGTGGTGGAATGTAACTCAAAGCTGGACCCCACAC...GAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | AACATTCATTTGGGACTATTGCCTTCAGAGAGGCCTGACACATCAAGGCAAAGCATCTTCATGAGGTGCTaGGTCTCCAACCACCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: NIHLGLLPSERPDTSRQSIFMRC*VSNHQH Trigger: ATGCTGGTGGTTGGAGACCAAGCACCTCATGAAGAT...GCTTTGCCTTGATGTGTCAGGCCTCTCTGAAGGCAATAGTCCCAAATGAATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | TGTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCCAGGTTGGGTGCGTGTaGGATGATACCTCTGTACTT | + |
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Preference number: 5 (lower is better) Translates to: CSSRATISHPFFLHAGYFQVGCV*DDTSVL Trigger: AAGTACAGAGGTATCATCCAACACGCACCCAACCTG...GAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | GTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCTATCTTCATGAGGTGCTaGGTCTCCAACCACCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: VLHGPPSPILSFYMLDISIFMRC*VSNHQH Trigger: ATGCTGGTGGTTGGAGACCAAGCACCTCATGAAGAT...AGAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS-3UTR CAA 90 bp | GTTCTTCACGGGCCACCATCTCCCATCCTTTCTTTTTACATGCTGGATATTTCTATCCAGCCCTTGGCATaGGGATCAATGTTGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: VLHGPPSPILSFYMLDISIQPLA*GSMLMR Trigger: TCTCATCAACATTGATCCCAATGCCAAGGGCTGGAT...AGAAATATCCAGCATGTAAAAAGAAAGGATGGGAGATGGTGGCCCGTGAAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS TCA 90 bp | TATTCCAGTAGAGTTCAATGTTCTCCAGGTTGGGTGCGTGTTGGATaGTACCTCTGTACTTTTGTATCAATTCAGAATTTCCAGAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: YSSRVQCSPGWVRVG*YLCTFVSIQNFQKA Trigger: AGCTTTCTGGAAATTCTGAATTGATACAAAAGTACAGAGGTATCATCCAACACGCACCCAACCTGGAGAACATTGAACTCTACTGGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000227237.2 ENSMUST00000227402.2 |
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| CDS GCA 90 bp | GTTGTTGTAGCTATTCCAGTAGAGTTCAATGTTCTCCAGGTTGGGTaGGTGTTGGATGATACCTCTGTACTTTTGTATCAATTCAGAATT | + |
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Preference number: 5 (lower is better) Translates to: VVVAIPVEFNVLQVG*VLDDTSVLLYQFRI Trigger: AATTCTGAATTGATACAAAAGTACAGAGGTATCATCCAACACGCACCCAACCTGGAGAACATTGAACTCTACTGGAATAGCTACAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000227237.2 |
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| CDS GCA 72 bp | GGGGGTCCAGAAGGGAGAGTCCCAGACTCGCTACTCTaGGACAGGGTGCGGGATCGGGACCGACTGCCATCG | + |
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Preference number: 6 (lower is better) Translates to: GGPEGRVPDSLL*DRVRDRDRLPS Trigger: CGATGGCAGTCGGTCCCGATCCCGCACCCTGTCGCAGAGTAGCGAGTCTGGGACTCTCCCTTCTGGACCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS CCA 72 bp | GCGACAGGGTGCGGGATCGGGACCGACTGCCATCGATaGATGCTGCACTGGTCAGAGATGCTGTGCGAGACC | + |
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Preference number: 6 (lower is better) Translates to: ATGCGIGTDCHR*MLHWSEMLCET Trigger: GGTCTCGCACAGCATCTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCCGATCCCGCACCCTGTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS GCA 72 bp | CAGGGTGCGGGATCGGGACCGACTGCCATCGATGGATaGTGCACTGGTCAGAGATGCTGTGCGAGACCGAGA | + |
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Preference number: 6 (lower is better) Translates to: QGAGSGPTAIDG*CTGQRCCARPR Trigger: TCTCGGTCTCGCACAGCATCTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCCGATCCCGCACCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS GCA 72 bp | CGCTACTCTGCGACAGGGTGCGGGATCGGGACCGACTaGCATCGATGGATGCTGCACTGGTCAGAGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: RYSATGCGIGTD*HRWMLHWSEML Trigger: CAGCATCTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCCGATCCCGCACCCTGTCGCAGAGTAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS GCA 72 bp | AAGGGAGAGTCCCAGACTCGCTACTCTGCGACAGGGTaGGGGATCGGGACCGACTGCCATCGATGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: KGESQTRYSATG*GIGTDCHRWML Trigger: CAGCATCCATCGATGGCAGTCGGTCCCGATCCCGCACCCTGTCGCAGAGTAGCGAGTCTGGGACTCTCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS CCA 72 bp | GGGATCGGGACCGACTGCCATCGATGGATGCTGCACTaGTCAGAGATGCTGTGCGAGACCGAGATAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: GIGTDCHRWMLH*SEMLCETEIGE Trigger: CTCGCCTATCTCGGTCTCGCACAGCATCTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCCGATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS CCA 72 bp | CACAGAGTGAGTCTTGGCAGTCTCGGGTGTTTGTCCTaGCAACAGCGGCTTCTCCTCGGTGATCTGCACCTC | + |
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Preference number: 6 (lower is better) Translates to: HRVSLGSLGCLS*QQRLLLGDLHL Trigger: GAGGTGCAGATCACCGAGGAGAAGCCGCTGTTGCCAGGACAAACACCCGAGACTGCCAAGACTCACTCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111632.5 ENSMUST00000226528.2 ENSMUST00000227237.2 ENSMUST00000228164.2 |
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| CDS GCA 72 bp | TCAGAGATGCTGTGCGAGACCGAGATAGGCGAGTCATaGAGGAAGAGGCCATGTAGCCCATGCCTTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SEMLCETEIGES*RKRPCSPCLAG Trigger: TCCTGCAAGGCATGGGCTACATGGCCTCTTCCTGCATGACTCGCCTATCTCGGTCTCGCACAGCATCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS GCA 72 bp | TGCCATCGATGGATGCTGCACTGGTCAGAGATGCTGTaGGAGACCGAGATAGGCGAGTCATGCAGGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CHRWMLHWSEML*ETEIGESCRKR Trigger: CCTCTTCCTGCATGACTCGCCTATCTCGGTCTCGCACAGCATCTCTGACCAGTGCAGCATCCATCGATGGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS CAA 72 bp | TGTCTCCACAGAGTGAGTCTTGGCAGTCTCGGGTGTTaGTCCTGGCAACAGCGGCTTCTCCTCGGTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: CLHRVSLGSLGC*SWQQRLLLGDL Trigger: CAGATCACCGAGGAGAAGCCGCTGTTGCCAGGACAAACACCCGAGACTGCCAAGACTCACTCTGTGGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111632.5 ENSMUST00000226528.2 ENSMUST00000227237.2 ENSMUST00000228164.2 |
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| CDS TCA 72 bp | CATCTTGAGGAACGAGGTCTGTGTGGGGTCCAGCTTTaGGTTACATTCCACCACGGCATCTTCATGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: HLEERGLCGVQL*VTFHHGIFMRC Trigger: GCACCTCATGAAGATGCCGTGGTGGAATGTAACTCAAAGCTGGACCCCACACAGACCTCGTTCCTCAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 |
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| CDS CAA 72 bp | ATCCACATGAACCCGCACGAAGTTCTGTATGATCTCTaGCATATCCCCGAACCGAAACAGTGGCTGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: IHMNPHEVLYDL*HIPEPKQWLEA Trigger: TGCTTCCAGCCACTGTTTCGGTTCGGGGATATGCAAGAGATCATACAGAACTTCGTGCGGGTTCATGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000226184.2 ENSMUST00000226528.2 ENSMUST00000227237.2 ENSMUST00000227402.2 ENSMUST00000228164.2 |
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| CDS CCA 72 bp | CTGTATGATCTCTTGCATATCCCCGAACCGAAACAGTaGCTGGAAGCAAGACTTATAGTTGAGGCCTACATC | + |
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Preference number: 6 (lower is better) Translates to: LYDLLHIPEPKQ*LEARLIVEAYI Trigger: GATGTAGGCCTCAACTATAAGTCTTGCTTCCAGCCACTGTTTCGGTTCGGGGATATGCAAGAGATCATACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000226184.2 ENSMUST00000226528.2 ENSMUST00000227237.2 ENSMUST00000227402.2 ENSMUST00000228164.2 |
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| CDS GCA 72 bp | GCTATTCCAGTAGAGTTCAATGTTCTCCAGGTTGGGTaGGTGTTGGATGATACCTCTGTACTTTTGTATCAA | + |
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Preference number: 6 (lower is better) Translates to: AIPVEFNVLQVG*VLDDTSVLLYQ Trigger: TTGATACAAAAGTACAGAGGTATCATCCAACACGCACCCAACCTGGAGAACATTGAACTCTACTGGAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000227237.2 ENSMUST00000227402.2 |
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| CDS CAA 72 bp | CAGGTTGGGTGCGTGTTGGATGATACCTCTGTACTTTaGTATCAATTCAGAATTTCCAGAAAGCTCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QVGCVLDDTSVL*YQFRISRKLFL Trigger: CAGGAAGAGCTTTCTGGAAATTCTGAATTGATACAAAAGTACAGAGGTATCATCCAACACGCACCCAACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000227237.2 ENSMUST00000227402.2 |
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| CDS CAA 72 bp | CCAGTAGAGTTCAATGTTCTCCAGGTTGGGTGCGTGTaGGATGATACCTCTGTACTTTTGTATCAATTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PVEFNVLQVGCV*DDTSVLLYQFR Trigger: TCTGAATTGATACAAAAGTACAGAGGTATCATCCAACACGCACCCAACCTGGAGAACATTGAACTCTACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000227237.2 ENSMUST00000227402.2 |
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| CDS CAA 90 bp | AATGTTCTCCAGGTTGGGTGCGTGTTGGATGATACCTCTGTACTTTaGTATCAATTCAGAATTTCCAGAAAGCTCTTCCTGGCTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: NVLQVGCVLDDTSVL*YQFRISRKLFLAEK Trigger: CTTTTCAGCCAGGAAGAGCTTTCTGGAAATTCTGAATTGATACAAAAGTACAGAGGTATCATCCAACACGCACCCAACCTGGAGAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000227237.2 ENSMUST00000227402.2 |
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| CDS CAA 90 bp | GTAGCTATTCCAGTAGAGTTCAATGTTCTCCAGGTTGGGTGCGTGTaGGATGATACCTCTGTACTTTTGTATCAATTCAGAATTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VAIPVEFNVLQVGCV*DDTSVLLYQFRISR Trigger: TCTGGAAATTCTGAATTGATACAAAAGTACAGAGGTATCATCCAACACGCACCCAACCTGGAGAACATTGAACTCTACTGGAATAGCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000227237.2 ENSMUST00000227402.2 |
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| CDS TCA 72 bp | AGAGTTCAATGTTCTCCAGGTTGGGTGCGTGTTGGATaGTACCTCTGTACTTTTGTATCAATTCAGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: RVQCSPGWVRVG*YLCTFVSIQNF Trigger: GAAATTCTGAATTGATACAAAAGTACAGAGGTATCATCCAACACGCACCCAACCTGGAGAACATTGAACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004673.15 ENSMUST00000111632.5 ENSMUST00000227237.2 ENSMUST00000227402.2 |
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