Pregenerated sensors for NDRG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005125Ensembl transcript IDs: ENSMUST00000005256.14, ENSMUST00000163496.8, ENSMUST00000164070.2, ENSMUST00000164675.8, ENSMUST00000166420.8, ENSMUST00000168542.8, ENSMUST00000168979.8, ENSMUST00000170903.8, ENSMUST00000171266.8, ENSMUST00000172447.8
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGAGAGAGGGTCCACCAGGCCACTTGTTAGCAGAACAGTACGCTaGACTGCTTCTTGCCTTTGGTCCACCACCACCCACCCTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: VERGSTRPLVSRTVR*TASCLWSTTTHPGP Trigger: GGGACCAGGGTGGGTGGTGGTGGACCAAAGGCAAGAAGCAGTTCAGCGTACTGTTCTGCTAACAAGTGGCCTGGTGGACCCTCTCTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR TCA 90 bp | TTAGTGGGGAGGAAACAGGAAGTAGGCAGGTTGGCAAAACGCCTATaGACCAGAATGCTGGATCAGCCTGGGCTTGGAGCCAGGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: LVGRKQEVGRLAKRL*TRMLDQPGLGARQC Trigger: ACACTGCCTGGCTCCAAGCCCAGGCTGATCCAGCATTCTGGTTCATAGGCGTTTTGCCAACCTGCCTACTTCCTGTTTCCTCCCCACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR GCA 90 bp | CAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATaGAACAACAAATCAAAACCATCTTCCCGAGGGACAGAGGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: QGPLSPAGFSLCLKE*NNKSKPSSRGTEVS Trigger: TGACACCTCTGTCCCTCGGGAAGATGGTTTTGATTTGTTGTTGCATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR GCA 90 bp | ACTCATCCCAGACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTaGCTCAAAGAATGCAACAACAAATCAAAACCATCTTCCCGAGGG | + |
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Preference number: 1 (lower is better) Translates to: THPRQGPLSPAGFSL*LKECNNKSKPSSRG Trigger: CCCTCGGGAAGATGGTTTTGATTTGTTGTTGCATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGATGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR GCA 90 bp | CCTTCCCATCCTAAAGACTCATCCCAGACAAGGACCCCTGTCACCTaGTGGGTTCTCCCTCTGCCTCAAAGAATGCAACAACAAATCAAA | + |
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Preference number: 1 (lower is better) Translates to: PSHPKDSSQTRTPVT*WVLPLPQRMQQQIK Trigger: TTTGATTTGTTGTTGCATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGATGAGTCTTTAGGATGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CCA 90 bp | GAGCCAGGCAGTGTTACAGCTATCTATTTCTTAGTTTTGGCAGTTTaGTGTCTGAGGGTAGAGAGAGGGTCCACCAGGCCACTTGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: EPGSVTAIYFLVLAV*CLRVERGSTRPLVS Trigger: GCTAACAAGTGGCCTGGTGGACCCTCTCTCTACCCTCAGACACCAAACTGCCAAAACTAAGAAATAGATAGCTGTAACACTGCCTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CCA 90 bp | ATCTTCCCGAGGGACAGAGGTGTCATCCACTCATTCACTGTGGAATaGGAGCGGGGTACAGTAGACTGCATAGCAAGAGTCTTAAATCAC | + |
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Preference number: 1 (lower is better) Translates to: IFPRDRGVIHSFTVE*ERGTVDCIARVLNH Trigger: GTGATTTAAGACTCTTGCTATGCAGTCTACTGTACCCCGCTCCCATTCCACAGTGAATGAGTGGATGACACCTCTGTCCCTCGGGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CCA 90 bp | CAAGATTCCAGATCAATGAAATCACACCCACCAGGTTCTAGCACTTaGCCCTACCATGAGTCCTCAAAATCCCAGGGCCATTCTATCCCC | + |
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Preference number: 1 (lower is better) Translates to: QDSRSMKSHPPGSST*PYHESSKSQGHSIP Trigger: GGGGATAGAATGGCCCTGGGATTTTGAGGACTCATGGTAGGGCCAAGTGCTAGAACCTGGTGGGTGTGATTTCATTGATCTGGAATCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR TCA 90 bp | GAACCCAAAACCAGTCCTTCCCCCACTAGAACATACGGTTCTCTCTaGAGAACCAGCGATGGGCCAGTTAAGAGACATTCAGCTATCAAG | + |
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Preference number: 1 (lower is better) Translates to: EPKTSPSPTRTYGSL*RTSDGPVKRHSAIK Trigger: CTTGATAGCTGAATGTCTCTTAACTGGCCCATCGCTGGTTCTTCAGAGAGAACCGTATGTTCTAGTGGGGGAAGGACTGGTTTTGGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CCA 90 bp | GAGACATATACAGTGATTTCTTGTCAGCATTCAATCACCCTGGCCTaGATTCCTGATCTTTCTACACAAGGTCAGTGGAACTCCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: ETYTVISCQHSITLA*IPDLSTQGQWNSSS Trigger: GGAGGAGGAGTTCCACTGACCTTGTGTAGAAAGATCAGGAATCCAGGCCAGGGTGATTGAATGCTGACAAGAAATCACTGTATATGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR TCA 90 bp | CAAGTTTCAAATCAATGCCAGACATCAATTATGGGAGACAAGGTGTaGCTCAGTCACACAAGATTCCAGATCAATGAAATCACACCCACC | + |
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Preference number: 1 (lower is better) Translates to: QVSNQCQTSIMGDKV*LSHTRFQINEITPT Trigger: GGTGGGTGTGATTTCATTGATCTGGAATCTTGTGTGACTGAGTCACACCTTGTCTCCCATAATTGATGTCTGGCATTGATTTGAAACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR GCA 90 bp | AGTAGACTGCATAGCAAGAGTCTTAAATCACTGATGCCCCACATTTaGTGGATCACTTTCTCTATAAAGCCTGGGGTTTGTTACCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: SRLHSKSLKSLMPHI*WITFSIKPGVCYQF Trigger: AAACTGGTAACAAACCCCAGGCTTTATAGAGAAAGTGATCCAGCAAATGTGGGGCATCAGTGATTTAAGACTCTTGCTATGCAGTCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CCA 90 bp | AGACATTCAGCTATCAAGTTTCAAATCAATGCCAGACATCAATTATaGGAGACAAGGTGTGACTCAGTCACACAAGATTCCAGATCAATG | + |
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Preference number: 1 (lower is better) Translates to: RHSAIKFQINARHQL*ETRCDSVTQDSRSM Trigger: CATTGATCTGGAATCTTGTGTGACTGAGTCACACCTTGTCTCCCATAATTGATGTCTGGCATTGATTTGAAACTTGATAGCTGAATGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CCA 90 bp | TCCCGAGGGACAGAGGTGTCATCCACTCATTCACTGTGGAATGGGAGCGGGGTACGCATTAGCGTAGGGTaGCAGGCAAGGGTTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SRGTEVSSTHSLWNGSGVRISVG*QARVGG Trigger: GCCCCCAACCCTTGCCTGCCACCCTACGCTAATGCG...TACCCCGCTCCCATTCCACAGTGAATGAGTGGATGACACCTCTGTCCCTCGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR TCA 90 bp | TTCATGAGCACGAGACCCTCTACCATCTCAGGGTTGTTGAGTGCGAAGCGGGTCGCATGTCCTCAGAGTTaGAGAGGGGGTTGTAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FMSTRPSTISGLLSAKRVACPQS*RGGCSR Trigger: CCTGCTACAACCCCCTCTTCAACTCTGAGGACATGC...GACCCGCTTCGCACTCAACAACCCTGAGATGGTAGAGGGTCTCGTGCTCATGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171266.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCGAGGGACAGAGGTGTCATCCACTCATTCACTGTGGAATGGGAGCGGGGTAGGCGCCCAACTTTCCTaGCTCTCTCTCTCCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SRGTEVSSTHSLWNGSGVGAQLS*LSLSFQ Trigger: TTGAAAGGAGAGAGAGAGGCAGGAAAGTTGGGCGCC...TACCCCGCTCCCATTCCACAGTGAATGAGTGGATGACACCTCTGTCCCTCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CCA 90 bp | AATGCTGGATCAGCCTGGGCTTGGAGCCAGGCAGTGTTACAGCTATCTATTTCTGTGGCAGGCAAGGGTTaGGGGCTAAGGGAGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: NAGSAWAWSQAVLQLSISVAGKG*GLRERP Trigger: TGGCCTCTCCCTTAGCCCCCAACCCTTGCCTGCCAC...AGAAATAGATAGCTGTAACACTGCCTGGCTCCAAGCCCAGGCTGATCCAGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR GCA 90 bp | TTCATGAGCACGAGACCCTCTACCATCTCAGGGTTGTTGAGTGCGAAGCGGGTCCTCAGGGTTGTTGAGTaGGAAGCGGGTCAGGATGTA | + |
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Preference number: 2 (lower is better) Translates to: FMSTRPSTISGLLSAKRVLRVVE*EAGQDV Trigger: TACATCCTGACCCGCTTCGCACTCAACAACCCTGAG...GACCCGCTTCGCACTCAACAACCCTGAGATGGTAGAGGGTCTCGTGCTCATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168542.8 ENSMUST00000171266.8 ENSMUST00000172447.8 |
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| 3UTR CAA 90 bp | CTGGGCTTGGAGCCAGGCAGTGTTACAGCTATCTATTTCTTAGTTTaGGCAGTTTGGTGTCTGAGGGTAGAGAGAGGGTCCACCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LGLEPGSVTAIYFLV*AVWCLRVERGSTRP Trigger: TGGCCTGGTGGACCCTCTCTCTACCCTCAGACACCAAACTGCCAAAACTAAGAAATAGATAGCTGTAACACTGCCTGGCTCCAAGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTGTCAGCATTCAATCACCCTGGCCTGGATTCCTGATCTTTCTACACAAGAGGACCCCTGTCACCTaGTGGGTTCTCCCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: FLVSIQSPWPGFLIFLHKRTPVT*WVLPLP Trigger: AGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCT...CTTGTGTAGAAAGATCAGGAATCCAGGCCAGGGTGATTGAATGCTGACAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CAA 90 bp | AAGAATCAAAAGGCAGTAGTATGGAGCATGGGCATTAGGCTGGCATaGCTTAAGAGGCCAATGCTACAAACCCAGTCAGCAGGAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KNQKAVVWSMGIRLA*LKRPMLQTQSAGGA Trigger: TGCCCCTCCTGCTGACTGGGTTTGTAGCATTGGCCTCTTAAGCAATGCCAGCCTAATGCCCATGCTCCATACTACTGCCTTTTGATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CAA 90 bp | GGTTGGCAAAACGCCTATGAACCAGAATGCTGGATCAGCCTGGGCTaGGAGCCAGGCAGTGTTACAGCTATCTATTTCTTAGTTTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GWQNAYEPECWISLG*EPGSVTAIYFLVLA Trigger: TGCCAAAACTAAGAAATAGATAGCTGTAACACTGCCTGGCTCCAAGCCCAGGCTGATCCAGCATTCTGGTTCATAGGCGTTTTGCCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCTATCAAGTTTCAAATCAATGCCAGACATCAATTATGGGAGACAAGGTGCACCACCACCCACCCTaGTCCCAGGAGGCAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FSYQVSNQCQTSIMGDKVHHHPP*SQEAVR Trigger: TCTGACTGCCTCCTGGGACCAGGGTGGGTGGTGGTG...CACCTTGTCTCCCATAATTGATGTCTGGCATTGATTTGAAACTTGATAGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGTTCTAGCACTTGGCCCTACCATGAGTCCTCAAAATCCCAGGGCCATTTTAGTTTTGGCAGTTTaGTGTCTGAGGGTAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HQVLALGPTMSPQNPRAILVLAV*CLRVER Trigger: TCTCTCTACCCTCAGACACCAAACTGCCAAAACTAA...AATGGCCCTGGGATTTTGAGGACTCATGGTAGGGCCAAGTGCTAGAACCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CCA 90 bp | CAATCACCCTGGCCTGGATTCCTGATCTTTCTACACAAGGTCAGTGGAACTCCTCAAAAGGCAGTAGTATaGAGCATGGGCATTAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QSPWPGFLIFLHKVSGTPQKAVV*SMGIRL Trigger: CAGCCTAATGCCCATGCTCCATACTACTGCCTTTTG...AGGAGTTCCACTGACCTTGTGTAGAAAGATCAGGAATCCAGGCCAGGGTGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR TCA 90 bp | AGCCTAGTAGACTTGTTGTGTTTTTCCTCTACCTGCCCTAGACCCTGCCTTTTTAGCAGAACAGTACGCTaGACTGCTTCTTGCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: SLVDLLCFSSTCPRPCLFSRTVR*TASCLW Trigger: CCAAAGGCAAGAAGCAGTTCAGCGTACTGTTCTGCT...AAAAAGGCAGGGTCTAGGGCAGGTAGAGGAAAAACACAACAAGTCTACTAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CCA 90 bp | AGCCTAGTAGACTTGTTGTGTTTTTCCTCTACCTGCCCTAGACCCTGCCTTTTTTATGAACCAGAATGCTaGATCAGCCTGGGCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLVDLLCFSSTCPRPCLFYEPEC*ISLGLE Trigger: CTCCAAGCCCAGGCTGATCCAGCATTCTGGTTCATA...AAAAAGGCAGGGTCTAGGGCAGGTAGAGGAAAAACACAACAAGTCTACTAGGCT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGTTCTAGCACTTGGCCCTACCATGAGTCCTCAAAATCCCAGGGCCATTATGCCCCACATTTGCTaGATCACTTTCTCTATAAAG | + |
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Preference number: 2 (lower is better) Translates to: HQVLALGPTMSPQNPRAIMPHIC*ITFSIK Trigger: CTTTATAGAGAAAGTGATCCAGCAAATGTGGGGCAT...AATGGCCCTGGGATTTTGAGGACTCATGGTAGGGCCAAGTGCTAGAACCTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR TCA 90 bp | AGCCTAGTAGACTTGTTGTGTTTTTCCTCTACCTGCCCTAGACCCTGCCTTTTTTTGGCAAAACGCCTATaGACCAGAATGCTGGATCAG | + |
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Preference number: 2 (lower is better) Translates to: SLVDLLCFSSTCPRPCLFLAKRL*TRMLDQ Trigger: CTGATCCAGCATTCTGGTTCATAGGCGTTTTGCCAA...AAAAAGGCAGGGTCTAGGGCAGGTAGAGGAAAAACACAACAAGTCTACTAGGCT 47% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR TCA 90 bp | ATCTTATTAAGAAACTGCCCTGGAGAGACATATACAGTGATTTCTTGTCAGCATGAAGTCGCCAGGCCTTaGGGGCTGACTCCCAACGAT | + |
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Preference number: 2 (lower is better) Translates to: ILLRNCPGETYTVISCQHEVARP*GLTPND Trigger: ATCGTTGGGAGTCAGCCCTCAAGGCCTGGCGACTTC...ATGCTGACAAGAAATCACTGTATATGTCTCTCCAGGGCAGTTTCTTAATAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTGTCAGCATTCAATCACCCTGGCCTGGATTCCTGATCTTTCTACACAAGGCTGGGTTCTCCCTCTaGCTCAAAGAATGCAACAAC | + |
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Preference number: 2 (lower is better) Translates to: FLVSIQSPWPGFLIFLHKAGFSL*LKECNN Trigger: GTTGTTGCATTCTTTGAGGCAGAGGGAGAACCCAGC...CTTGTGTAGAAAGATCAGGAATCCAGGCCAGGGTGATTGAATGCTGACAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CCA 90 bp | CATTCAGCTATCAAGTTTCAAATCAATGCCAGACATCAATTATGGGAGACAAGGACCCCTGTCACCTGCTaGGTTCTCCCTCTGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: HSAIKFQINARHQLWETRTPVTC*VLPLPQ Trigger: TTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGT...CCTTGTCTCCCATAATTGATGTCTGGCATTGATTTGAAACTTGATAGCTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CCA 90 bp | ACATTCATGAGCACGAGACCCTCTACCATCTCAGGGTTGTTGAGTGCGAAGCGGGTCTCACTTATCCCATaGATAATAGGTATTTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TFMSTRPSTISGLLSAKRVSLIP*IIGICS Trigger: AGAGCAAATACCTATTATCCATGGGATAAGTGAGAC...CCGCTTCGCACTCAACAACCCTGAGATGGTAGAGGGTCTCGTGCTCATGAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171266.8 |
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| 3UTR-3UTR GCA 90 bp | ACAACAAATCAAAACCATCTTCCCGAGGGACAGAGGTGTCATCCACTCATTCACTGTTTTTCCTCTACCTaGCCTAGACCCTGCCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: TTNQNHLPEGQRCHPLIHCFSST*PRPCLF Trigger: AAAAAGGCAGGGTCTAGGGCAGGTAGAGGAAAAACA...GTGAATGAGTGGATGACACCTCTGTCCCTCGGGAAGATGGTTTTGATTTGTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CAA 90 bp | CTCAATATCCTGCTCCTGAAAAGTACTCTGTTGTCTGCATCTGGCTaGAGTTTCCTTGACTTCTTGTTCCTGTGTCTCACTTATCCCATG | + |
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Preference number: 2 (lower is better) Translates to: LNILLLKSTLLSASG*SFLDFLFLCLTYPM Trigger: CATGGGATAAGTGAGACACAGGAACAAGAAGTCAAGGAAACTCAAGCCAGATGCAGACAACAGAGTACTTTTCAGGAGCAGGATATTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171266.8 |
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| 3UTR CAA 90 bp | AAAAGTACTCTGTTGTCTGCATCTGGCTTGAGTTTCCTTGACTTCTaGTTCCTGTGTCTCACTTATCCCATGGATAATAGGTATTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: KSTLLSASGLSFLDF*FLCLTYPMDNRYLL Trigger: GAGCAAATACCTATTATCCATGGGATAAGTGAGACACAGGAACAAGAAGTCAAGGAAACTCAAGCCAGATGCAGACAACAGAGTACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171266.8 |
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| 3UTR GCA 72 bp | GGACGGTTGCCCTTGGGGGTCCCACACAGGGTGACATaGAGGGAGCCATGTAGGGTCTCAATATCCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GRLPLGVPHRVT*REPCRVSISCS Trigger: GGAGCAGGATATTGAGACCCTACATGGCTCCCTGCATGTCACCCTGTGTGGGACCCCCAAGGGCAACCGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171266.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCCAGACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATTGGATCAGCCTGGGCTaGGAGCCAGGCAGTGTTACA | + |
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Preference number: 3 (lower is better) Translates to: IPDKDPCHLLGSPSASKNWISLG*EPGSVT Trigger: TGTAACACTGCCTGGCTCCAAGCCCAGGCTGATCCA...ATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR TCA 72 bp | GGGTCCACCAGGCCACTTGTTAGCAGAACAGTACGCTaGACTGCTTCTTGCCTTTGGTCCACCACCACCCAC | + |
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Preference number: 3 (lower is better) Translates to: GSTRPLVSRTVR*TASCLWSTTTH Trigger: GTGGGTGGTGGTGGACCAAAGGCAAGAAGCAGTTCAGCGTACTGTTCTGCTAACAAGTGGCCTGGTGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR GCA 72 bp | CCCTGGTCCCAGGAGGCAGTCAGAACAGCCTGGGTCTaGCACCGCCAGAGTTCATTCTTACAAAAGCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: PWSQEAVRTAWV*HRQSSFLQKQL Trigger: AAGCTGCTTTTGTAAGAATGAACTCTGGCGGTGGCAGACCCAGGCTGTTCTGACTGCCTCCTGGGACCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR GCA 72 bp | GCATGGGCATTAGGCTGGCATTGCTTAAGAGGCCAATaGTACAAACCCAGTCAGCAGGAGGGGCAGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: AWALGWHCLRGQ*YKPSQQEGQER Trigger: CCTCTCCTGCCCCTCCTGCTGACTGGGTTTGTAGCATTGGCCTCTTAAGCAATGCCAGCCTAATGCCCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CAA 90 bp | GAACCAGAATGCTGGATCAGCCTGGGCTTGGAGCCAGGCAGTGTTACAGCTATCACGCTGAACTGCTTCTaGCCTTTGGTCCACCACCAC | + |
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Preference number: 3 (lower is better) Translates to: EPECWISLGLEPGSVTAITLNCF*PLVHHH Trigger: GTGGTGGTGGACCAAAGGCAAGAAGCAGTTCAGCGT...GATAGCTGTAACACTGCCTGGCTCCAAGCCCAGGCTGATCCAGCATTCTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR TCA 72 bp | AGGAAACAGGAAGTAGGCAGGTTGGCAAAACGCCTATaGACCAGAATGCTGGATCAGCCTGGGCTTGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: RKQEVGRLAKRL*TRMLDQPGLGA Trigger: GGCTCCAAGCCCAGGCTGATCCAGCATTCTGGTTCATAGGCGTTTTGCCAACCTGCCTACTTCCTGTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR GCA 72 bp | CCTAAAGACTCATCCCAGACAAGGACCCCTGTCACCTaGTGGGTTCTCCCTCTGCCTCAAAGAATGCAACAA | + |
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Preference number: 3 (lower is better) Translates to: PKDSSQTRTPVT*WVLPLPQRMQQ Trigger: TTGTTGCATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGATGAGTCTTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CCA 72 bp | AGGGACAGAGGTGTCATCCACTCATTCACTGTGGAATaGGAGCGGGGTACAGTAGACTGCATAGCAAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: RDRGVIHSFTVE*ERGTVDCIARV Trigger: GACTCTTGCTATGCAGTCTACTGTACCCCGCTCCCATTCCACAGTGAATGAGTGGATGACACCTCTGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR-3UTR CAA 90 bp | AGTTTGTTTCCAGGAATGAGTTTAGTGGGGAGGAAACAGGAAGTAGGCAGGTTGAACTGCTTCTTGCCTTaGGTCCACCACCACCCACCC | + |
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Preference number: 3 (lower is better) Translates to: SLFPGMSLVGRKQEVGRLNCFLP*VHHHPP Trigger: GGGTGGGTGGTGGTGGACCAAAGGCAAGAAGCAGTT...CAACCTGCCTACTTCCTGTTTCCTCCCCACTAAACTCATTCCTGGAAACAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| 3UTR CCA 72 bp | GGCAAAACGCCTATGAACCAGAATGCTGGATCAGCCTaGGCTTGGAGCCAGGCAGTGTTACAGCTATCTATT | + |
|
Preference number: 3 (lower is better) Translates to: GKTPMNQNAGSA*AWSQAVLQLSI Trigger: AATAGATAGCTGTAACACTGCCTGGCTCCAAGCCCAGGCTGATCCAGCATTCTGGTTCATAGGCGTTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR TCA 72 bp | ACCAGTCCTTCCCCCACTAGAACATACGGTTCTCTCTaGAGAACCAGCGATGGGCCAGTTAAGAGACATTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSPSPTRTYGSL*RTSDGPVKRHS Trigger: TGAATGTCTCTTAACTGGCCCATCGCTGGTTCTTCAGAGAGAACCGTATGTTCTAGTGGGGGAAGGACTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR CCA 72 bp | AGATCAATGAAATCACACCCACCAGGTTCTAGCACTTaGCCCTACCATGAGTCCTCAAAATCCCAGGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RSMKSHPPGSST*PYHESSKSQGH Trigger: ATGGCCCTGGGATTTTGAGGACTCATGGTAGGGCCAAGTGCTAGAACCTGGTGGGTGTGATTTCATTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR TCA 72 bp | TTCTTGTCAGCATTCAATCACCCTGGCCTGGATTCCTaGTCTTTCTACACAAGGTCAGTGGAACTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLSAFNHPGLDS*SFYTRSVELLL Trigger: GAGGAGGAGTTCCACTGACCTTGTGTAGAAAGATCAGGAATCCAGGCCAGGGTGATTGAATGCTGACAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR GCA 72 bp | AGACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTaGCTCAAAGAATGCAACAACAAATCAAAACCATCT | + |
|
Preference number: 3 (lower is better) Translates to: RQGPLSPAGFSL*LKECNNKSKPS Trigger: AGATGGTTTTGATTTGTTGTTGCATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR-3UTR CAA 90 bp | ACAACAAATCAAAACCATCTTCCCGAGGGACAGAGGTGTCATCCACTCATTCACTGCCAGAAAAACAGGTaGTGGGTTTCAGTGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TTNQNHLPEGQRCHPLIHCQKNR*WVSVSR Trigger: TCTGGACACTGAAACCCACAACCTGTTTTTCTGGCA...GTGAATGAGTGGATGACACCTCTGTCCCTCGGGAAGATGGTTTTGATTTGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR-3UTR CAA 90 bp | ACAACAAATCAAAACCATCTTCCCGAGGGACAGAGGTGTCATCCACTCATTCACACTGATGCCCCACATTaGCTGGATCACTTTCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: TTNQNHLPEGQRCHPLIHTDAPH*LDHFLY Trigger: ATAGAGAAAGTGATCCAGCAAATGTGGGGCATCAGT...GTGAATGAGTGGATGACACCTCTGTCCCTCGGGAAGATGGTTTTGATTTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR GCA 72 bp | CATAGCAAGAGTCTTAAATCACTGATGCCCCACATTTaGTGGATCACTTTCTCTATAAAGCCTGGGGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HSKSLKSLMPHI*WITFSIKPGVC Trigger: ACAAACCCCAGGCTTTATAGAGAAAGTGATCCAGCAAATGTGGGGCATCAGTGATTTAAGACTCTTGCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR CCA 72 bp | AGCAAGAGTCTTAAATCACTGATGCCCCACATTTGCTaGATCACTTTCTCTATAAAGCCTGGGGTTTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SKSLKSLMPHIC*ITFSIKPGVCY Trigger: GTAACAAACCCCAGGCTTTATAGAGAAAGTGATCCAGCAAATGTGGGGCATCAGTGATTTAAGACTCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR CCA 72 bp | GCTATCAAGTTTCAAATCAATGCCAGACATCAATTATaGGAGACAAGGTGTGACTCAGTCACACAAGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: AIKFQINARHQL*ETRCDSVTQDS Trigger: GGAATCTTGTGTGACTGAGTCACACCTTGTCTCCCATAATTGATGTCTGGCATTGATTTGAAACTTGATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR CCA 72 bp | TCCTTGACTTCTTGTTCCTGTGTCTCACTTATCCCATaGATAATAGGTATTTGCTCTTTGAGGCTTCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLTSCSCVSLIP*IIGICSLRLPR Trigger: TCTAGGAAGCCTCAAAGAGCAAATACCTATTATCCATGGGATAAGTGAGACACAGGAACAAGAAGTCAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171266.8 |
||
| 3UTR TCA 72 bp | AATCAATGCCAGACATCAATTATGGGAGACAAGGTGTaGCTCAGTCACACAAGATTCCAGATCAATGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: NQCQTSIMGDKV*LSHTRFQINEI Trigger: GATTTCATTGATCTGGAATCTTGTGTGACTGAGTCACACCTTGTCTCCCATAATTGATGTCTGGCATTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCAGAACTTTAAAATCAATTCCTTCAAGTGAGCCTAGTAGACTTGTTGTGATCTATTTCTTAGTTTaGGCAGTTTGGTGTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSRTLKSIPSSEPSRLVVIYFLV*AVWCLR Trigger: CCTCAGACACCAAACTGCCAAAACTAAGAAATAGAT...CACAACAAGTCTACTAGGCTCACTTGAAGGAATTGATTTTAAAGTTCTGGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR GCA 90 bp | ACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATGCAACAAGACCCCTCACTGGTGTaGGAGCGGCTTCGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TRTPVTCWVLPLPQRMQQDPSLV*ERLRGP Trigger: GGGCCCCCGAAGCCGCTCGCACACCAGTGAGGGGTC...TTGTTGCATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATGGGTCCCACACAGGGTaGCATGCAGGGAGCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPDKDPCHLLGSPSASKNGSHTG*HAGSHV Trigger: TACATGGCTCCCTGCATGTCACCCTGTGTGGGACCC...ATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR TCA 90 bp | TATCCCCACCCTTCCCATCCTAAAGACTCATCCCAGACAAGGACCCCTGTCACCTCGGGTTCATGTCGTTaGGGATGTGCTGGCGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: YPHPSHPKDSSQTRTPVTSGSCR*GCAGGT Trigger: CGTACCGCCAGCACATCCTCAACGACATGAACCCGA...GGTGACAGGGGTCCTTGTCTGGGATGAGTCTTTAGGATGGGAAGGGTGGGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR TCA 90 bp | ACAGGGGTTCACATTCATGAGCACGAGACCCTCTACCATCTCAGGGTTGTTGAGGGGGCACCATCAGGGTaGCATGCAGGGAGCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TGVHIHEHETLYHLRVVEGAPSG*HAGSHV Trigger: TACATGGCTCCCTGCATGTCACCCTGATGGTGCCCC...CTCAACAACCCTGAGATGGTAGAGGGTCTCGTGCTCATGAATGTGAACCCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164675.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCCCCATGCCAATGACACTCTTGAGCCCAAACTGGTGAAGGACTCCAGGAGCCAACTGATCCATTaGGGGGTACATGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCPHANDTLEPKLVKDSRSQLIH*GVHAGS Trigger: GCTCCCTGCATGTACCCCTCAATGGATCAGTTGGCT...CCTGGAGTCCTTCACCAGTTTGGGCTCAAGAGTGTCATTGGCATGGGGACAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172447.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGGCCTGGATTCCTGATCTTTCTACACAAGGTCAGTGGAACTCCTCCTCCAAGCAGGACACCTCCATaGACTTGGGCCCGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PWPGFLIFLHKVSGTPPPSRTPP*TWARHC Trigger: ACAATGCCGGGCCCAAGTCCATGGAGGTGTCCTGCT...TGGAGGAGGAGTTCCACTGACCTTGTGTAGAAAGATCAGGAATCCAGGCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR CCA 90 bp | TTAGCAGAACAGTACGCTGAACTGCTTCTTGCCTTTGGTCCACCACCACCCACCTGCAAAGTGACAGTGTaGGTTCCAGGCATTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LAEQYAELLLAFGPPPPTCKVTV*VPGIGR Trigger: GCGGCCAATGCCTGGAACCCACACTGTCACTTTGCA...GGTGGGTGGTGGTGGACCAAAGGCAAGAAGCAGTTCAGCGTACTGTTCTGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR TCA 90 bp | GCACAGGGGTTCACATTCATGAGCACGAGACCCTCTACCATCTCAGGGTTGTTGAGCCAACTGATCCATTaGGGGGTACATGTACCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQGFTFMSTRPSTISGLLSQLIH*GVHVPH Trigger: GTGGGGTACATGTACCCCTCAATGGATCAGTTGGCT...CAACAACCCTGAGATGGTAGAGGGTCTCGTGCTCATGAATGTGAACCCCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164675.8 |
||
| CDS-3UTR TCA 90 bp | CAATCACCCTGGCCTGGATTCCTGATCTTTCTACACAAGGTCAGTGGAACTCCTGGCTTGGGTCCATCCTaGGATCTTAGAGGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSPWPGFLIFLHKVSGTPGLGPS*DLRGSP Trigger: TGGGCTGCCTCTAAGATCTCAGGATGGACCCAAGCC...AGGAGTTCCACTGACCTTGTGTAGAAAGATCAGGAATCCAGGCCAGGGTGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR GCA 90 bp | CACCAGGTTCTAGCACTTGGCCCTACCATGAGTCCTCAAAATCCCAGGGCCATTCTCAGGGTTGTTGAGTaGGAAGCGGGTCAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: HQVLALGPTMSPQNPRAILRVVE*EAGQDV Trigger: TACATCCTGACCCGCTTCGCACTCAACAACCCTGAG...AATGGCCCTGGGATTTTGAGGACTCATGGTAGGGCCAAGTGCTAGAACCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCCTGGATTCCTGATCTTTCTACACAAGGTCAGTGGAACTCCTCCTCCAAGCAGAGCAGGGCACTaGAAAGTGACAGTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PWPGFLIFLHKVSGTPPPSRAGH*KVTVWV Trigger: AACCCACACTGTCACTTTGCAGTGCCCTGCTCTGCT...TGGAGGAGGAGTTCCACTGACCTTGTGTAGAAAGATCAGGAATCCAGGCCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATCCAGGGGCATCCACATaGCAGACAGCAAAATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPDKDPCHLLGSPSASKNPGAST*QTAKCC Trigger: ACAACATTTTGCTGTCTGCCATGTGGATGCCCCTGG...ATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR CCA 90 bp | ACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATGCAACAATCAGGCGAGTCATGCTaGCAGAAGGCATGTATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRTPVTCWVLPLPQRMQQSGESC*QKACIP Trigger: TGGGATACATGCCTTCTGCCAGCATGACTCGCCTGA...TTGTTGCATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR TCA 90 bp | TTTCTTGTCAGCATTCAATCACCCTGGCCTGGATTCCTGATCTTTCTACACAAGTGCCCTCCAGGGATGTaGCACTGGAGCCAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLVSIQSPWPGFLIFLHKCPPGM*HWSQRL Trigger: CAGCCTCTGGCTCCAGTGTCACATCCCTGGAGGGCA...CTTGTGTAGAAAGATCAGGAATCCAGGCCAGGGTGATTGAATGCTGACAAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCATGCCAATGACACTCTTGAGCCCAAACTGGTGAAGGACTCCAGGAAGAGCCAACTGATCCATTaGGGGGTACATGTAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPHANDTLEPKLVKDSRKSQLIH*GVHVGS Trigger: AGACCCTACATGTACCCCTCAATGGATCAGTTGGCT...CTTCCTGGAGTCCTTCACCAGTTTGGGCTCAAGAGTGTCATTGGCATGGGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168542.8 |
||
| CDS-3UTR TCA 90 bp | AATGCTGGATCAGCCTGGGCTTGGAGCCAGGCAGTGTTACAGCTATCTATTTCTAGCCAACTGATCCATTaGGGGGTACATGTACCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NAGSAWAWSQAVLQLSISSQLIH*GVHVPH Trigger: GTGGGGTACATGTACCCCTCAATGGATCAGTTGGCT...AGAAATAGATAGCTGTAACACTGCCTGGCTCCAAGCCCAGGCTGATCCAGCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR TCA 90 bp | GGCTTGGAGCCAGGCAGTGTTACAGCTATCTATTTCTTAGTTTTGGCAGTTTGGCAGGGCACTGCAAAGTaGCAGTGTGGGTTCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLEPGSVTAIYFLVLAVWQGTAK*QCGFQA Trigger: TGCCTGGAACCCACACTGTCACTTTGCAGTGCCCTG...CCAAACTGCCAAAACTAAGAAATAGATAGCTGTAACACTGCCTGGCTCCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATTGTTGTGTGATCTCCTaGATGTCCTCAGAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IPDKDPCHLLGSPSASKNCCVIS*MSSELK Trigger: CTTCAACTCTGAGGACATGCAGGAGATCACACAACA...ATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR GCA 90 bp | CAATCACCCTGGCCTGGATTCCTGATCTTTCTACACAAGGTCAGTGGAACTCCTTGTGTATCTCCTCCTTaGCGAAGAGGTGGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: QSPWPGFLIFLHKVSGTPCVSPP*RRGGTP Trigger: TGGTGTCCCACCTCTTCGGCAAGGAGGAGATACACA...AGGAGTTCCACTGACCTTGTGTAGAAAGATCAGGAATCCAGGCCAGGGTGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGGAATGAGTTTAGTGGGGAGGAAACAGGAAGTAGGCAGGTTGGCAAAAGTGGGTTCCAGGCATTaGCCGCTCAATCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPGMSLVGRKQEVGRLAKVGSRH*PLNLQV Trigger: GACCTGGAGATTGAGCGGCCAATGCCTGGAACCCAC...TTTTGCCAACCTGCCTACTTCCTGTTTCCTCCCCACTAAACTCATTCCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATCAGGGTGGTCTTCGTTaGGTCCAATTTAGAATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPDKDPCHLLGSPSASKNQGGLR*VQFRIA Trigger: TGCAATTCTAAATTGGACCCAACGAAGACCACCCTG...ATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR GCA 90 bp | ACAACAAATCAAAACCATCTTCCCGAGGGACAGAGGTGTCATCCACTCATTCACTGCTGGCGGTACGTGTaGACTACCTCCACGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTNQNHLPEGQRCHPLIHCWRYV*TTSTLL Trigger: CAACAACGTGGAGGTAGTGCACACGTACCGCCAGCA...GTGAATGAGTGGATGACACCTCTGTCCCTCGGGAAGATGGTTTTGATTTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR GCA 90 bp | CATTCAGCTATCAAGTTTCAAATCAATGCCAGACATCAATTATGGGAGACAAGGTGGAGCCAGAGGCTGTaGGGGACCGCATCAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSAIKFQINARHQLWETRWSQRL*GTASGE Trigger: CTCGCCTGATGCGGTCCCGCACAGCCTCTGGCTCCA...CCTTGTCTCCCATAATTGATGTCTGGCATTGATTTGAAACTTGATAGCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR CAA 72 bp | AAGGCAGTAGTATGGAGCATGGGCATTAGGCTGGCATaGCTTAAGAGGCCAATGCTACAAACCCAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KAVVWSMGIRLA*LKRPMLQTQSA Trigger: TGCTGACTGGGTTTGTAGCATTGGCCTCTTAAGCAATGCCAGCCTAATGCCCATGCTCCATACTACTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR CAA 72 bp | CAGTGTTACAGCTATCTATTTCTTAGTTTTGGCAGTTaGGTGTCTGAGGGTAGAGAGAGGGTCCACCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCYSYLFLSFGS*VSEGRERVHQA Trigger: GGCCTGGTGGACCCTCTCTCTACCCTCAGACACCAAACTGCCAAAACTAAGAAATAGATAGCTGTAACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR TCA 90 bp | TTTCCAGGAATGAGTTTAGTGGGGAGGAAACAGGAAGTAGGCAGGTTGGCAAAATTCATGCCGATGTCGTaGTACGTGAGGATGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPGMSLVGRKQEVGRLAKFMPMS*YVRMTG Trigger: TCCTGTCATCCTCACGTATCACGACATCGGCATGAA...TTTTGCCAACCTGCCTACTTCCTGTTTCCTCCCCACTAAACTCATTCCTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR TCA 90 bp | CATTCAGCTATCAAGTTTCAAATCAATGCCAGACATCAATTATGGGAGACAAGGGCATGTCCTCAGAGTTaGAGAGGGGGTTGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAIKFQINARHQLWETRACPQS*RGGCSR Trigger: CCTGCTACAACCCCCTCTTCAACTCTGAGGACATGC...CCTTGTCTCCCATAATTGATGTCTGGCATTGATTTGAAACTTGATAGCTGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR GCA 90 bp | ATCTTATTAAGAAACTGCCCTGGAGAGACATATACAGTGATTTCTTGTCAGCATCCACACAGGGTGACATaGAGGGAGCCATGTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLRNCPGETYTVISCQHPHRVT*REPCRV Trigger: GACCCTACATGGCTCCCTGCATGTCACCCTGTGTGG...ATGCTGACAAGAAATCACTGTATATGTCTCTCCAGGGCAGTTTCTTAATAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| 3UTR CAA 72 bp | CTGCTCCTGAAAAGTACTCTGTTGTCTGCATCTGGCTaGAGTTTCCTTGACTTCTTGTTCCTGTGTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLLKSTLLSASG*SFLDFLFLCLT Trigger: AGTGAGACACAGGAACAAGAAGTCAAGGAAACTCAAGCCAGATGCAGACAACAGAGTACTTTTCAGGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171266.8 |
||
| 3UTR CAA 72 bp | CTGTTGTCTGCATCTGGCTTGAGTTTCCTTGACTTCTaGTTCCTGTGTCTCACTTATCCCATGGATAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSASGLSFLDF*FLCLTYPMDNR Trigger: CCTATTATCCATGGGATAAGTGAGACACAGGAACAAGAAGTCAAGGAAACTCAAGCCAGATGCAGACAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171266.8 |
||
| CDS-3UTR TCA 90 bp | GACTTCTTGTTCCTGTGTCTCACTTATCCCATGGATAATAGGTATTTGCTCTTTACAACCTCAGTTTCCTaGACATCGAACTCTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DFLFLCLTYPMDNRYLLFTTSVS*TSNSCR Trigger: CCTGCAAGAGTTCGATGTTCAGGAAACTGAGGTTGT...AAAGAGCAAATACCTATTATCCATGGGATAAGTGAGACACAGGAACAAGAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171266.8 |
||
| CDS CCA 90 bp | GCACCCGAGTTGGGGGTGATGTTGAGACGGGCATCCTCACTGGTATaGGAGCGGCTACGGGACCCCTCACTGGTGTGCGAGCGGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: APELGVMLRRASSLV*ERLRDPSLVCERLR Trigger: CCGAAGCCGCTCGCACACCAGTGAGGGGTCCCGTAGCCGCTCCCATACCAGTGAGGATGCCCGTCTCAACATCACCCCCAACTCGGGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS-3UTR CAA 90 bp | TCCCAGACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATGACAGGACGGTTGCCCTaGGGGGTCCCACACAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQTRTPVTCWVLPLPQRMTGRLP*GVPHRV Trigger: CACCCTGTGTGGGACCCCCAAGGGCAACCGTCCTGT...CATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
||
| CDS CCA 90 bp | CAGCAGAGCAGGGCACTGCAAAGTGACAGTGTGGGTTCCAGGCATTaGCCGCTCAATCTCCAGGTCTCTCCGGCTGTTGTAGGCGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QQSRALQSDSVGSRH*PLNLQVSPAVVGAD Trigger: ATCAGCGCCTACAACAGCCGGAGAGACCTGGAGATTGAGCGGCCAATGCCTGGAACCCACACTGTCACTTTGCAGTGCCCTGCTCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005256.14 ENSMUST00000166420.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTCTACCATCTCAGGGTTGTTGAGTGCGAAGCGGGTCAGGATGTAGGCGCCCAGCCAACTGATCCATaGAGGGGTACATGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLYHLRVVECEAGQDVGAQPTDP*RGTCRE Trigger: CTCCCTGCATGTACCCCTCAATGGATCAGTTGGCTG...GGCGCCTACATCCTGACCCGCTTCGCACTCAACAACCCTGAGATGGTAGAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172447.8 |
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| CDS CCA 90 bp | TGCACTACCTCCACGTTGTTGTGTATCTCCTCCTTGCCGAAGAGGTaGGACACCACCATGTCAGGCAGGGCTTGGGTCCATCCTGAGATC | + |
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Preference number: 5 (lower is better) Translates to: CTTSTLLCISSLPKR*DTTMSGRAWVHPEI Trigger: GATCTCAGGATGGACCCAAGCCCTGCCTGACATGGTGGTGTCCCACCTCTTCGGCAAGGAGGAGATACACAACAACGTGGAGGTAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS GCA 90 bp | AGGTTGCTCGGGTTCATGTCGTTGAGGATGTGCTGGCGGTACGTGTaGACTACCTCCACGTTGTTGTGTATCTCCTCCTTGCCGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RLLGFMSLRMCWRYV*TTSTLLCISSLPKR Trigger: CCTCTTCGGCAAGGAGGAGATACACAACAACGTGGAGGTAGTGCACACGTACCGCCAGCACATCCTCAACGACATGAACCCGAGCAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS-3UTR CAA 90 bp | CCCTGGCCTGGATTCCTGATCTTTCTACACAAGGTCAGTGGAACTCCTCCTCCACTCGGGTTCATGTCGTaGAGGATGTGCTGGCGGTAC | + |
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Preference number: 5 (lower is better) Translates to: PWPGFLIFLHKVSGTPPPLGFMS*RMCWRY Trigger: GTACCGCCAGCACATCCTCAACGACATGAACCCGAG...TGGAGGAGGAGTTCCACTGACCTTGTGTAGAAAGATCAGGAATCCAGGCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS-3UTR CAA 90 bp | TTAGCAGAACAGTACGCTGAACTGCTTCTTGCCTTTGGTCCACCACCACCCACCTGTGGGTTCCAGGCATaGGCCGCTCAATCTCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: LAEQYAELLLAFGPPPPTCGFQA*AAQSPG Trigger: ACCTGGAGATTGAGCGGCCAATGCCTGGAACCCACA...GGTGGGTGGTGGTGGACCAAAGGCAAGAAGCAGTTCAGCGTACTGTTCTGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS-3UTR CAA 90 bp | TCCCGAGGGACAGAGGTGTCATCCACTCATTCACTGTGGAATGGGAGCGGGGTACCCTGCACAAAGTACTaGAAGGCCTCAGCAAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SRGTEVSSTHSLWNGSGVPCTKY*KASASL Trigger: CAAGCTTGCTGAGGCCTTCAAGTACTTTGTGCAGGG...TACCCCGCTCCCATTCCACAGTGAATGAGTGGATGACACCTCTGTCCCTCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS-3UTR CAA 90 bp | ATCCCAGACAAGGACCCCTGTCACCTGCTGGGTTCTCCCTCTGCCTCAAAGAATCAGCCAACTGATCCATaGAGGGGTACATGTACCCCA | + |
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Preference number: 5 (lower is better) Translates to: IPDKDPCHLLGSPSASKNQPTDP*RGTCTP Trigger: TGGGGTACATGTACCCCTCAATGGATCAGTTGGCTG...ATTCTTTGAGGCAGAGGGAGAACCCAGCAGGTGACAGGGGTCCTTGTCTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS-3UTR CAA 90 bp | CCAGCCTTCAGCACAGGGGTTCACATTCATGAGCACGAGACCCTCTACCATCTCCAGCCAACTGATCCATaGAGGGGTACATGTACCCCA | + |
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Preference number: 5 (lower is better) Translates to: PAFSTGVHIHEHETLYHLQPTDP*RGTCTP Trigger: TGGGGTACATGTACCCCTCAATGGATCAGTTGGCTG...GAGATGGTAGAGGGTCTCGTGCTCATGAATGTGAACCCCTGTGCTGAAGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164675.8 |
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| CDS-3UTR CAA 90 bp | TTAGCAGAACAGTACGCTGAACTGCTTCTTGCCTTTGGTCCACCACCACCCACCTTGTGTATCTCCTCCTaGCCGAAGAGGTGGGACACC | + |
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Preference number: 5 (lower is better) Translates to: LAEQYAELLLAFGPPPPTLCISS*PKRWDT Trigger: GGTGTCCCACCTCTTCGGCAAGGAGGAGATACACAA...GGTGGGTGGTGGTGGACCAAAGGCAAGAAGCAGTTCAGCGTACTGTTCTGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS-3UTR CAA 90 bp | AATGCTGGATCAGCCTGGGCTTGGAGCCAGGCAGTGTTACAGCTATCTATTTCTGACACCTCCATGGACTaGGGCCCGGCATTGTTTCCG | + |
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Preference number: 5 (lower is better) Translates to: NAGSAWAWSQAVLQLSISDTSMD*GPALFP Trigger: CGGAAACAATGCCGGGCCCAAGTCCATGGAGGTGTC...AGAAATAGATAGCTGTAACACTGCCTGGCTCCAAGCCCAGGCTGATCCAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS-3UTR CAA 90 bp | CACGAGACCCTCTACCATCTCAGGGTTGTTGAGTGCGAAGCGGGTCAGGATGTACAGCCAACTGATCCATaGAGGGGTACATGTAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: HETLYHLRVVECEAGQDVQPTDP*RGTCRV Trigger: GACCCTACATGTACCCCTCAATGGATCAGTTGGCTG...TACATCCTGACCCGCTTCGCACTCAACAACCCTGAGATGGTAGAGGGTCTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168542.8 |
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| CDS GCA 90 bp | AGCAAGCTTGGCGGGCTGAGAGATCTGAGGAAGGCCTCCACAGTCTaGCATCTTGAGCAGGGTGGTCTTCGTTGGGTCCAATTTAGAATT | + |
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Preference number: 5 (lower is better) Translates to: SKLGGLRDLRKASTV*HLEQGGLRWVQFRI Trigger: AATTCTAAATTGGACCCAACGAAGACCACCCTGCTCAAGATGGCAGACTGTGGAGGCCTTCCTCAGATCTCTCAGCCCGCCAAGCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005256.14 ENSMUST00000166420.8 |
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| CDS TCA 90 bp | AGGGTGACATGCAGGGAGCCATGTAGGGTCTCAATATCCTGCTCCTaGACATCGAACTCTTGCAGGAGACCAGTGATGCTCTCCCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: RVTCREPCRVSISCS*TSNSCRRPVMLSPF Trigger: AAAAGGGGAGAGCATCACTGGTCTCCTGCAAGAGTTCGATGTTCAGGAGCAGGATATTGAGACCCTACATGGCTCCCTGCATGTCACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005256.14 ENSMUST00000163496.8 ENSMUST00000164675.8 ENSMUST00000168979.8 ENSMUST00000170903.8 |
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| CDS TCA 90 bp | AGGGGTACATGCAGGGAGCCATGTAGGGTCTCAATATCCTGCTCCTaGACATCGAACTCTTGCAGGAGACCAGTGATGCTCTCCCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: RGTCREPCRVSISCS*TSNSCRRPVMLSPF Trigger: AAAAGGGGAGAGCATCACTGGTCTCCTGCAAGAGTTCGATGTTCAGGAGCAGGATATTGAGACCCTACATGGCTCCCTGCATGTACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172447.8 |
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| CDS GCA 90 bp | CTGATGAATAAGTGTAGGTTGCTCGGGTTCATGTCGTTGAGGATGTaGTGGCGGTACGTGTGCACTACCTCCACGTTGTTGTGTATCTCC | + |
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Preference number: 5 (lower is better) Translates to: LMNKCRLLGFMSLRM*WRYVCTTSTLLCIS Trigger: GGAGATACACAACAACGTGGAGGTAGTGCACACGTACCGCCAGCACATCCTCAACGACATGAACCCGAGCAACCTACACTTATTCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CCA 90 bp | ATGAATAAGTGTAGGTTGCTCGGGTTCATGTCGTTGAGGATGTGCTaGCGGTACGTGTGCACTACCTCCACGTTGTTGTGTATCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: MNKCRLLGFMSLRMC*RYVCTTSTLLCISS Trigger: GGAGGAGATACACAACAACGTGGAGGTAGTGCACACGTACCGCCAGCACATCCTCAACGACATGAACCCGAGCAACCTACACTTATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS-3UTR CAA 90 bp | TTGCTGGATCACTTTCTCTATAAAGCCTGGGGTTTGTTACCAGTTTTTCTTGCACCGGTGGCACCCGAGTaGGGGGTGATGTTGAGACGG | + |
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Preference number: 5 (lower is better) Translates to: LLDHFLYKAWGLLPVFLAPVAPE*GVMLRR Trigger: CCGTCTCAACATCACCCCCAACTCGGGTGCCACCGG...TGCAAGAAAAACTGGTAACAAACCCCAGGCTTTATAGAGAAAGTGATCCAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS-3UTR CAA 90 bp | ACAACAAATCAAAACCATCTTCCCGAGGGACAGAGGTGTCATCCACTCATTCACCCACAGTCTGCCATCTaGAGCAGGGTGGTCTTCGTT | + |
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Preference number: 5 (lower is better) Translates to: TTNQNHLPEGQRCHPLIHPQSAI*SRVVFV Trigger: AACGAAGACCACCCTGCTCAAGATGGCAGACTGTGG...GTGAATGAGTGGATGACACCTCTGTCCCTCGGGAAGATGGTTTTGATTTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS TCA 90 bp | ACTGATCCATTGAGGGGTACATGTAGGGTCTCAATATCCTGCTCCTaGACATCGAACTCTTGCAGGAGACCAGTGATGCTCTCCCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: TDPLRGTCRVSISCS*TSNSCRRPVMLSPF Trigger: AAAAGGGGAGAGCATCACTGGTCTCCTGCAAGAGTTCGATGTTCAGGAGCAGGATATTGAGACCCTACATGTACCCCTCAATGGATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168542.8 |
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| CDS-3UTR CAA 90 bp | ATCTTATTAAGAAACTGCCCTGGAGAGACATATACAGTGATTTCTTGTCAGCATGGGTCCAATTTAGAATaGCATTCCACCACAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: ILLRNCPGETYTVISCQHGSNLE*HSTTAS Trigger: GGATGCTGTGGTGGAATGCAATTCTAAATTGGACCC...ATGCTGACAAGAAATCACTGTATATGTCTCTCCAGGGCAGTTTCTTAATAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CAA 90 bp | TTGGGCCCGGCATTGTTTCCGGTGGCACCCGAGTTGGGGGTGATGTaGAGACGGGCATCCTCACTGGTATGGGAGCGGCTACGGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: LGPALFPVAPELGVM*RRASSLVWERLRDP Trigger: GGGGTCCCGTAGCCGCTCCCATACCAGTGAGGATGCCCGTCTCAACATCACCCCCAACTCGGGTGCCACCGGAAACAATGCCGGGCCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CAA 90 bp | ACCTCCATGGACTTGGGCCCGGCATTGTTTCCGGTGGCACCCGAGTaGGGGGTGATGTTGAGACGGGCATCCTCACTGGTATGGGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: TSMDLGPALFPVAPE*GVMLRRASSLVWER Trigger: CCGCTCCCATACCAGTGAGGATGCCCGTCTCAACATCACCCCCAACTCGGGTGCCACCGGAAACAATGCCGGGCCCAAGTCCATGGAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CCA 72 bp | TTGGGGGTGATGTTGAGACGGGCATCCTCACTGGTATaGGAGCGGCTACGGGACCCCTCACTGGTGTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LGVMLRRASSLV*ERLRDPSLVCE Trigger: CTCGCACACCAGTGAGGGGTCCCGTAGCCGCTCCCATACCAGTGAGGATGCCCGTCTCAACATCACCCCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CAA 72 bp | GACTTGGGCCCGGCATTGTTTCCGGTGGCACCCGAGTaGGGGGTGATGTTGAGACGGGCATCCTCACTGGTA | + |
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Preference number: 6 (lower is better) Translates to: DLGPALFPVAPE*GVMLRRASSLV Trigger: TACCAGTGAGGATGCCCGTCTCAACATCACCCCCAACTCGGGTGCCACCGGAAACAATGCCGGGCCCAAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS GCA 72 bp | TGTGCACTACCTCCACGTTGTTGTGTATCTCCTCCTTaGCGAAGAGGTGGGACACCACCATGTCAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: CALPPRCCVSPP*RRGGTPPCQAG Trigger: CCCTGCCTGACATGGTGGTGTCCCACCTCTTCGGCAAGGAGGAGATACACAACAACGTGGAGGTAGTGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CAA 72 bp | GTGTGCACTACCTCCACGTTGTTGTGTATCTCCTCCTaGCCGAAGAGGTGGGACACCACCATGTCAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VCTTSTLLCISS*PKRWDTTMSGR Trigger: CCTGCCTGACATGGTGGTGTCCCACCTCTTCGGCAAGGAGGAGATACACAACAACGTGGAGGTAGTGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CAA 72 bp | ATGTGCTGGCGGTACGTGTGCACTACCTCCACGTTGTaGTGTATCTCCTCCTTGCCGAAGAGGTGGGACACC | + |
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Preference number: 6 (lower is better) Translates to: MCWRYVCTTSTL*CISSLPKRWDT Trigger: GGTGTCCCACCTCTTCGGCAAGGAGGAGATACACAACAACGTGGAGGTAGTGCACACGTACCGCCAGCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS TCA 72 bp | ATGTACCCCACTGGGAAGGAAGGGGCACCATCAGGGTaGCATGCAGGGAGCCATGTAGGGTCTCAATATCCT | + |
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Preference number: 6 (lower is better) Translates to: MYPTGKEGAPSG*HAGSHVGSQYP Trigger: AGGATATTGAGACCCTACATGGCTCCCTGCATGTCACCCTGATGGTGCCCCTTCCTTCCCAGTGGGGTACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164675.8 |
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| CDS GCA 72 bp | GGGTTCATGTCGTTGAGGATGTGCTGGCGGTACGTGTaGACTACCTCCACGTTGTTGTGTATCTCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GFMSLRMCWRYV*TTSTLLCISSL Trigger: CAAGGAGGAGATACACAACAACGTGGAGGTAGTGCACACGTACCGCCAGCACATCCTCAACGACATGAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS GCA 72 bp | AAGTGTAGGTTGCTCGGGTTCATGTCGTTGAGGATGTaGTGGCGGTACGTGTGCACTACCTCCACGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KCRLLGFMSLRM*WRYVCTTSTLL Trigger: CAACAACGTGGAGGTAGTGCACACGTACCGCCAGCACATCCTCAACGACATGAACCCGAGCAACCTACACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CCA 72 bp | TGTAGGTTGCTCGGGTTCATGTCGTTGAGGATGTGCTaGCGGTACGTGTGCACTACCTCCACGTTGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: CRLLGFMSLRMC*RYVCTTSTLLC Trigger: ACACAACAACGTGGAGGTAGTGCACACGTACCGCCAGCACATCCTCAACGACATGAACCCGAGCAACCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CAA 72 bp | GAATTGCATTCCACCACAGCATCCACGGCAGGAGAGTaGTCTCCAACTACCAGCAGAGCAGGGCACTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: ELHSTTASTAGE*SPTTSRAGHCK Trigger: TTTGCAGTGCCCTGCTCTGCTGGTAGTTGGAGACAACTCTCCTGCCGTGGATGCTGTGGTGGAATGCAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005256.14 ENSMUST00000166420.8 |
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| CDS CAA 90 bp | GTGATACGTGAGGATGACAGGACGGTTGCCCTGAACATCGAACTCTaGCAGGAGACCAGTGATGCTCTCCCCTTTTTCCACCAGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VIREDDRTVALNIEL*QETSDALPFFHQRL Trigger: AAGCCTCTGGTGGAAAAAGGGGAGAGCATCACTGGTCTCCTGCAAGAGTTCGATGTTCAGGGCAACCGTCCTGTCATCCTCACGTATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164070.2 |
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| CDS TCA 72 bp | TGCAGGGAGCCATGTAGGGTCTCAATATCCTGCTCCTaGACATCGAACTCTTGCAGGAGACCAGTGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: CREPCRVSISCS*TSNSCRRPVML Trigger: GAGCATCACTGGTCTCCTGCAAGAGTTCGATGTTCAGGAGCAGGATATTGAGACCCTACATGGCTCCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000005256.14 ENSMUST00000163496.8 ENSMUST00000164675.8 ENSMUST00000168979.8 ENSMUST00000170903.8 ENSMUST00000172447.8 |
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| CDS CAA 72 bp | CTGATGAATAAGTGTAGGTTGCTCGGGTTCATGTCGTaGAGGATGTGCTGGCGGTACGTGTGCACTACCTCC | + |
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Preference number: 6 (lower is better) Translates to: LMNKCRLLGFMS*RMCWRYVCTTS Trigger: GGAGGTAGTGCACACGTACCGCCAGCACATCCTCAACGACATGAACCCGAGCAACCTACACTTATTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005256.14 |
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| CDS CAA 90 bp | TCTGCCATCTTGAGCAGGGTGGTCTTCGTTGGGTCCAATTTAGAATaGCATTCCACCACAGCATCCACGGCAGGAGAGTTGTCTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: SAILSRVVFVGSNLE*HSTTASTAGELSPT Trigger: AGTTGGAGACAACTCTCCTGCCGTGGATGCTGTGGTGGAATGCAATTCTAAATTGGACCCAACGAAGACCACCCTGCTCAAGATGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005256.14 ENSMUST00000166420.8 |
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| CDS CAA 72 bp | TTGAGCAGGGTGGTCTTCGTTGGGTCCAATTTAGAATaGCATTCCACCACAGCATCCACGGCAGGAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LSRVVFVGSNLE*HSTTASTAGEL Trigger: CAACTCTCCTGCCGTGGATGCTGTGGTGGAATGCAATTCTAAATTGGACCCAACGAAGACCACCCTGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005256.14 ENSMUST00000166420.8 |
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| CDS TCA 72 bp | TTGAGGGGTACATGTAGGGTCTCAATATCCTGCTCCTaGACATCGAACTCTTGCAGGAGACCAGTGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: LRGTCRVSISCS*TSNSCRRPVML Trigger: GAGCATCACTGGTCTCCTGCAAGAGTTCGATGTTCAGGAGCAGGATATTGAGACCCTACATGTACCCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168542.8 |
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| CDS CCA 72 bp | TCCACAGTCTGCCATCTTGAGCAGGGTGGTCTTCGTTaGGTCCAATTTAGAATTGCATTCCACCACAGCATC | + |
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Preference number: 6 (lower is better) Translates to: STVCHLEQGGLR*VQFRIAFHHSI Trigger: GATGCTGTGGTGGAATGCAATTCTAAATTGGACCCAACGAAGACCACCCTGCTCAAGATGGCAGACTGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005256.14 ENSMUST00000166420.8 |
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| CDS TCA 72 bp | CTGATGAATAAGTGTAGGGTCTCAATATCCTGCTCCTaGACATCGAACTCTTGCAGGAGACCAGTGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: LMNKCRVSISCS*TSNSCRRPVML Trigger: GAGCATCACTGGTCTCCTGCAAGAGTTCGATGTTCAGGAGCAGGATATTGAGACCCTACACTTATTCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166420.8 |
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