Pregenerated sensors for NDOR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006471, ENSMUSG00000115018, ENSMUSG00000115074Ensembl transcript IDs: ENSMUST00000100329.10, ENSMUST00000114349.9, ENSMUST00000132128.3, ENSMUST00000141808.8, ENSMUST00000147866.2, ENSMUST00000148589.9, ENSMUST00000228052.2, ENSMUST00000228627.3
Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCTCCTCCACAACCTGCCCCTCACCTTCCTGCTCTTCCACAGTTaGCTCCAGGGCCCTGGCAGCGGATGGGTCTCTGGCCTCCAGTTC | + |
|
Preference number: 1 (lower is better) Translates to: LLLHNLPLTFLLFHS*LQGPGSGWVSGLQF Trigger: GAACTGGAGGCCAGAGACCCATCCGCTGCCAGGGCCCTGGAGTCAACTGTGGAAGAGCAGGAAGGTGAGGGGCAGGTTGTGGAGGAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 90 bp | CAGATGGGACATTCCTCCTCCTCCACAACCTGCCCCTCACCTTCCTaGTCTTCCACAGTTGACTCCAGGGCCCTGGCAGCGGATGGGTCT | + |
|
Preference number: 1 (lower is better) Translates to: QMGHSSSSTTCPSPS*SSTVDSRALAADGS Trigger: AGACCCATCCGCTGCCAGGGCCCTGGAGTCAACTGTGGAAGAGCAGGAAGGTGAGGGGCAGGTTGTGGAGGAGGAGGAATGTCCCATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 90 bp | AGGCTGGCCTGGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTaGTGCGATCAAAGGTGTGCGCCACCACTGCCTGGTCTGAGAGCC | + |
|
Preference number: 1 (lower is better) Translates to: RLAWNSEIHLPLPPK*CDQRCAPPLPGLRA Trigger: GGCTCTCAGACCAGGCAGTGGTGGCGCACACCTTTGATCGCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAGGCCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR CCA 90 bp | CCTGGCAGCGGATGGGTCTCTGGCCTCCAGTTCCGGTTTACTGTCTaGAGTTCTGGCACCCAGAGGGGCCCTGAGATCATCCTCTCCATC | + |
|
Preference number: 1 (lower is better) Translates to: PGSGWVSGLQFRFTV*SSGTQRGPEIILSI Trigger: GATGGAGAGGATGATCTCAGGGCCCCTCTGGGTGCCAGAACTCCAGACAGTAAACCGGAACTGGAGGCCAGAGACCCATCCGCTGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR CCA 90 bp | TCTTCTGACGACACAGTGGACAGCACACACGGCCCAGGTCAGCTCTaGGGGTCATGCCTAACAGCTGGTGTAGGCAGCCCACACACAGGC | + |
|
Preference number: 1 (lower is better) Translates to: SSDDTVDSTHGPGQL*GSCLTAGVGSPHTG Trigger: GCCTGTGTGTGGGCTGCCTACACCAGCTGTTAGGCATGACCCCCAGAGCTGACCTGGGCCGTGTGTGCTGTCCACTGTGTCGTCAGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTGGAACTCAGAAATCCACCTGCCTCTaGCTCCCAAGTGCTGCGATCAAAGGTGTGCGCCACCACTGCCTG | + |
|
Preference number: 1 (lower is better) Translates to: LCRPGWPGTQKSTCL*LPSAAIKGVRHHCL Trigger: CAGGCAGTGGTGGCGCACACCTTTGATCGCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR TCA 90 bp | CCAGTTCCGGTTTACTGTCTGGAGTTCTGGCACCCAGAGGGGCCCTaGGATCATCCTCTCCATCTGCTGGTAGCTGGCACAGTGGGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: PVPVYCLEFWHPEGP*DHPLHLLVAGTVGP Trigger: TGGACCCACTGTGCCAGCTACCAGCAGATGGAGAGGATGATCTCAGGGCCCCTCTGGGTGCCAGAACTCCAGACAGTAAACCGGAACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 90 bp | AGGTGTTATGGGACTAATGGGAATAGCACGGGGTCAGACGGGCAGTaGAGCCCGCACAGCTCTATGTCCTTTGGAGGGCTTAGCAGGCCC | + |
|
Preference number: 1 (lower is better) Translates to: RCYGTNGNSTGSDGQ*SPHSSMSFGGLSRP Trigger: GGGCCTGCTAAGCCCTCCAAAGGACATAGAGCTGTGCGGGCTGCACTGCCCGTCTGACCCCGTGCTATTCCCATTAGTCCCATAACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR GCA 90 bp | CCAGCTCATGCTGGTCATCACCCAGACATGGGGGCAGAAGCGCACTaGCTCCTAGCTGCAGCAGCCTACGATGTAGCTTCTTGGCCACAA | + |
|
Preference number: 1 (lower is better) Translates to: PAHAGHHPDMGAEAH*LLAAAAYDVASWPQ Trigger: TTGTGGCCAAGAAGCTACATCGTAGGCTGCTGCAGCTAGGAGGCAGTGCGCTTCTGCCCCCATGTCTGGGTGATGACCAGCATGAGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR GCA 90 bp | CACCCGCTGTATGTGGAAAGTCGCATAGCACCTCCAAGATGGTTCTaGGGGGCCGACTGCAGTACTCCCAGAGCTCTTCCTGACCTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: HPLYVESRIAPPRWF*GADCSTPRALPDLW Trigger: CCAGAGGTCAGGAAGAGCTCTGGGAGTACTGCAGTCGGCCCCGCAGAACCATCTTGGAGGTGCTATGCGACTTTCCACATACAGCGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 90 bp | CAAGCTGACAGACAGAACCGAGGTTCCTTAGCGCCCAGCTGCCCTTaGACCTGTCTGACTGCTCCAACAGGGTTTCCTTCCCAGCAGTGG | + |
|
Preference number: 1 (lower is better) Translates to: QADRQNRGSLAPSCP*TCLTAPTGFPSQQW Trigger: CCACTGCTGGGAAGGAAACCCTGTTGGAGCAGTCAGACAGGTCCAAGGGCAGCTGGGCGCTAAGGAACCTCGGTTCTGTCTGTCAGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR CCA 90 bp | CTGGGACACGAGGTTCCACACAGTACAGGGCTGAGGCAGCCCTGGTaGGTCAGGGACACCTGGTTCCCGTGGCTTAAGTGTGAAAAACTG | + |
|
Preference number: 1 (lower is better) Translates to: LGHEVPHSTGLRQPW*VRDTWFPWLKCEKL Trigger: CAGTTTTTCACACTTAAGCCACGGGAACCAGGTGTCCCTGACCCACCAGGGCTGCCTCAGCCCTGTACTGTGTGGAACCTCGTGTCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 90 bp | GCTTGCCCAGGATTCAGGGATGCTAGCCAGGAGGAGCAGAGACCATaGCGGGGCTCCTTCAGACGAGTCTGGTACTTTACCACAGCCACA | + |
|
Preference number: 1 (lower is better) Translates to: ACPGFRDASQEEQRP*RGSFRRVWYFTTAT Trigger: TGTGGCTGTGGTAAAGTACCAGACTCGTCTGAAGGAGCCCCGCCATGGTCTCTGCTCCTCCTGGCTAGCATCCCTGAATCCTGGGCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR TCA 90 bp | GTCTGGTACTTTACCACAGCCACAAGGATCTGTAGCCTCCTGGGATaGGCCAGTAGGGAGGAAGCAATGGAGAAGGCCCGTGGGCGGATC | + |
|
Preference number: 1 (lower is better) Translates to: VWYFTTATRICSLLG*ASREEAMEKARGRI Trigger: GATCCGCCCACGGGCCTTCTCCATTGCTTCCTCCCTACTGGCTCATCCCAGGAGGCTACAGATCCTTGTGGCTGTGGTAAAGTACCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR GCA 90 bp | CCAGTACTCACCAGTTTGGCCATGAGCCACTCGTTCCTGAATGGCTaGTCGGAAGGGGGCCACACCAGTTCCAGCCCCCACCATGATAAT | + |
|
Preference number: 1 (lower is better) Translates to: PVLTSLAMSHSFLNG*SEGGHTSSSPHHDN Trigger: ATTATCATGGTGGGGGCTGGAACTGGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGTGAGTACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 90 bp | GGGAGAGACAAGCCAGGAGCTCAAAGAAGGAACGGCGGGGCACACTaGCAATGTCCAAGTACTGGGACACGAGGTTCCACACAGTACAGG | + |
|
Preference number: 1 (lower is better) Translates to: GRDKPGAQRRNGGAH*QCPSTGTRGSTQYR Trigger: CCTGTACTGTGTGGAACCTCGTGTCCCAGTACTTGGACATTGCCAGTGTGCCCCGCCGTTCCTTCTTTGAGCTCCTGGCTTGTCTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 90 bp | GAATGGCACCCGCTGTATGTGGAAAGTCGCATAGCACCTCCAAGATaGTTCTGCGGGGCCGACTGCAGTACTCCCAGAGCTCTTCCTGAC | + |
|
Preference number: 1 (lower is better) Translates to: EWHPLYVESRIAPPR*FCGADCSTPRALPD Trigger: GTCAGGAAGAGCTCTGGGAGTACTGCAGTCGGCCCCGCAGAACCATCTTGGAGGTGCTATGCGACTTTCCACATACAGCGGGTGCCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 90 bp | GACGAGTCTGGTACTTTACCACAGCCACAAGGATCTGTAGCCTCCTaGGATGAGCCAGTAGGGAGGAAGCAATGGAGAAGGCCCGTGGGC | + |
|
Preference number: 1 (lower is better) Translates to: DESGTLPQPQGSVAS*DEPVGRKQWRRPVG Trigger: GCCCACGGGCCTTCTCCATTGCTTCCTCCCTACTGGCTCATCCCAGGAGGCTACAGATCCTTGTGGCTGTGGTAAAGTACCAGACTCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR GCA 90 bp | AGTAGCTTAGGTTGGGTGGGAGCTTTTGAAGGCTGGCTTGTGCAGTaGAGGCCTCTCCTGGTAGTTACTGTGGCTGCTGCTGTTGCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: SSLGWVGAFEGWLVQ*RPLLVVTVAAAVAF Trigger: GAAGGCAACAGCAGCAGCCACAGTAACTACCAGGAGAGGCCTGCACTGCACAAGCCAGCCTTCAAAAGCTCCCACCCAACCTAAGCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR GCA 90 bp | TGGTCATCACCCAGACATGGGGGCAGAAGCGCACTGCCTCCTAGCTaGAGCAGCCTACGATGTAGCTTCTTGGCCACAAAGTTGAACTTG | + |
|
Preference number: 1 (lower is better) Translates to: WSSPRHGGRSALPPS*SSLRCSFLATKLNL Trigger: CAAGTTCAACTTTGTGGCCAAGAAGCTACATCGTAGGCTGCTGCAGCTAGGAGGCAGTGCGCTTCTGCCCCCATGTCTGGGTGATGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR TCA 90 bp | CTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTaGGAGTCTGCAGCCCTTGCCTTCTCCAATGAACAGATCTCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: LLLPSGHTPASVWCR*ESAALAFSNEQISG Trigger: TCCTGAGATCTGTTCATTGGAGAAGGCAAGGGCTGCAGACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR GCA 90 bp | GGATGCAGAAATTCAGCTAGACCAGGCTCAGTGGTCAGGTCACACTaGTTTGGAGCTCCAGTACTCACCAGTTTGGCCATGAGCCACTCG | + |
|
Preference number: 1 (lower is better) Translates to: GCRNSARPGSVVRSH*FGAPVLTSLAMSHS Trigger: CGAGTGGCTCATGGCCAAACTGGTGAGTACTGGAGCTCCAAAGCAGTGTGACCTGACCACTGAGCCTGGTCTAGCTGAATTTCTGCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 90 bp | ATGAGCTTGGCTGAGTTGTGTGGCCATCAGAGAAGGGGACTAGCTTaGCTAAACTGTCAGTACAAGCCTGTGCTCATGCCCTGGAGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: MSLAELCGHQRRGLA*LNCQYKPVLMPWRA Trigger: AGCCCTCCAGGGCATGAGCACAGGCTTGTACTGACAGTTTAGCCAAGCTAGTCCCCTTCTCTGATGGCCACACAACTCAGCCAAGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR TCA 90 bp | TTGGCATATGAGGAATCCCCGAGGCCTAGGACAGCAAAATCCATTTaGCAGAGGGAGCTGGACGGCAGGCTCTTCCGGAATATGAACCTC | + |
|
Preference number: 1 (lower is better) Translates to: LAYEESPRPRTAKSI*QRELDGRLFRNMNL Trigger: GAGGTTCATATTCCGGAAGAGCCTGCCGTCCAGCTCCCTCTGTCAAATGGATTTTGCTGTCCTAGGCCTCGGGGATTCCTCATATGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR GCA 90 bp | CTAAACTGTCAGTACAAGCCTGTGCTCATGCCCTGGAGGGCTCTTTaGCCACCACTAGCAGATGCAGATAATCCATGTCCCAACCACCAC | + |
|
Preference number: 1 (lower is better) Translates to: LNCQYKPVLMPWRAL*PPLADADNPCPNHH Trigger: GTGGTGGTTGGGACATGGATTATCTGCATCTGCTAGTGGTGGGCAAAGAGCCCTCCAGGGCATGAGCACAGGCTTGTACTGACAGTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 90 bp | AGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGCGATCAAAGGTGTaGGCCACCACTGCCTGGTCTGAGAGCCTTTCTTATGCTTGTTAT | + |
|
Preference number: 1 (lower is better) Translates to: RNPPASASQVLRSKV*ATTAWSESLSYACY Trigger: ATAACAAGCATAAGAAAGGCTCTCAGACCAGGCAGTGGTGGCGCACACCTTTGATCGCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR TCA 90 bp | CCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACTaGGCTGAGCTGCACAGGTGTTATGGGACTAATGGGAATAGCACG | + |
|
Preference number: 1 (lower is better) Translates to: PFPMLRRLGPWWLFN*AELHRCYGTNGNST Trigger: CGTGCTATTCCCATTAGTCCCATAACACCTGTGCAGCTCAGCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR TCA 90 bp | AGTAAGCTTCACTTGGGTCCCCGCAGCATGTCAACTCTTGGTATCTaGGGCCTAAGAGTGGTGTTGGTCTGGTCCCTGTTTTCCACAAGC | + |
|
Preference number: 1 (lower is better) Translates to: SKLHLGPRSMSTLGI*GLRVVLVWSLFSTS Trigger: GCTTGTGGAAAACAGGGACCAGACCAACACCACTCTTAGGCCTCAGATACCAAGAGTTGACATGCTGCGGGGACCCAAGTGAAGCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR TCA 90 bp | GAGGCTTCAGGGTCTGGATGGGCCCTTGCAAAACAAAGGCAATATTaGTCCCAGCTCCTCTGGGCTACCTTCTCTGGTGAGAGTAGCTTA | + |
|
Preference number: 1 (lower is better) Translates to: EASGSGWALAKQRQY*SQLLWATFSGESSL Trigger: TAAGCTACTCTCACCAGAGAAGGTAGCCCAGAGGAGCTGGGATCAATATTGCCTTTGTTTTGCAAGGGCCCATCCAGACCCTGAAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR GCA 90 bp | GAAGCGCAGTGTCTGCTGGAGCCTAGCAAGGTAGGCAGATGCATCTaGAGTGGAGAGTCGTCCTTCTTCTTGAAAAATGGACATAAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: EAQCLLEPSKVGRCI*SGESSFFLKNGHKG Trigger: GCCCTTATGTCCATTTTTCAAGAAGAAGGACGACTCTCCACTGCAGATGCATCTGCCTACCTTGCTAGGCTCCAGCAGACACTGCGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 90 bp | GGACTAGCTTGGCTAAACTGTCAGTACAAGCCTGTGCTCATGCCCTaGAGGGCTCTTTGCCCACCACTAGCAGATGCAGATAATCCATGT | + |
|
Preference number: 1 (lower is better) Translates to: GLAWLNCQYKPVLMP*RALCPPLADADNPC Trigger: ACATGGATTATCTGCATCTGCTAGTGGTGGGCAAAGAGCCCTCCAGGGCATGAGCACAGGCTTGTACTGACAGTTTAGCCAAGCTAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 90 bp | CTCATGTTTATGGACCTGCAGACAGACAGATTTGCCCATTCCCAATaGTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACTGAGCTGAGC | + |
|
Preference number: 1 (lower is better) Translates to: LMFMDLQTDRFAHSQ*SGDLVPGGFSTELS Trigger: GCTCAGCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGCAGGTCCATAAACATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR GCA 90 bp | AGTCTGGAAGCGCAGTGTCTGCTGGAGCCTAGCAAGGTAGGCAGATaGATCTGCAGTGGAGAGTCGTCCTTCTTCTTGAAAAATGGACAT | + |
|
Preference number: 1 (lower is better) Translates to: SLEAQCLLEPSKVGR*ICSGESSFFLKNGH Trigger: ATGTCCATTTTTCAAGAAGAAGGACGACTCTCCACTGCAGATGCATCTGCCTACCTTGCTAGGCTCCAGCAGACACTGCGCTTCCAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR TCA 90 bp | AGATTTGTCTGCATCTCCCAAGTGAGGGCTCCTGGTCCAGTGACATaGATTGCAGAGTCAACTAGGAACAGAGCTAGACCTTGGGCATTT | + |
|
Preference number: 1 (lower is better) Translates to: RFVCISQVRAPGPVT*IAESTRNRARPWAF Trigger: AAATGCCCAAGGTCTAGCTCTGTTCCTAGTTGACTCTGCAATTCATGTCACTGGACCAGGAGCCCTCACTTGGGAGATGCAGACAAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR TCA 90 bp | TTCTGTCTGGTGCAGGTGAGAGTCTGCAGCCCTTGCCTTCTCCAATaGACAGATCTCAGGATAAACAGAATCACTGTTGGAATCACACAT | + |
|
Preference number: 1 (lower is better) Translates to: FCLVQVRVCSPCLLQ*TDLRINRITVGITH Trigger: ATGTGTGATTCCAACAGTGATTCTGTTTATCCTGAGATCTGTTCATTGGAGAAGGCAAGGGCTGCAGACTCTCACCTGCACCAGACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR CCA 90 bp | TTGCCTTCTCCAATGAACAGATCTCAGGATAAACAGAATCACTGTTaGAATCACACATTTGTGTCCACTCTCACCAGCTGGACTACGAGC | + |
|
Preference number: 1 (lower is better) Translates to: LPSPMNRSQDKQNHC*NHTFVSTLTSWTTS Trigger: GCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTGATTCCAACAGTGATTCTGTTTATCCTGAGATCTGTTCATTGGAGAAGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGCAGTGGAGGCCCTGCCCATGGGCGGGCCAACACAAATCACACCCCCTCCCCTGTGCTCATGCCCTaGAGGGCTCTTTGCCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: PSSGGPAHGRANTNHTPSPVLMP*RALCPP Trigger: TGGTGGGCAAAGAGCCCTCCAGGGCATGAGCACAGG...GGAGGGGGTGTGATTTGTGTTGGCCCGCCCATGGGCAGGGCCTCCACTGCTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTTTGGGAACACGAGGCTCCCAGGACGTACCCACAGAGGCACCCGGACAGGCACACAGTACAGGGCTaGGGCAGCCCTGGTGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CFWEHEAPRTYPQRHPDRHTVQG*GSPGGS Trigger: TGACCCACCAGGGCTGCCTCAGCCCTGTACTGTGTG...CCTGTCCGGGTGCCTCTGTGGGTACGTCCTGGGAGCCTCGTGTTCCCAAAAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTTGGGAACACGAGGCTCCCAGGACGTACCCACAGAGGCACCCGGACAGGTCAGAACTGCTGGGTGTaGGCCTCCGAGTTAGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VFGNTRLPGRTHRGTRTGQNCWV*ASELEG Trigger: GCCCTCTAACTCGGAGGCCCACACCCAGCAGTTCTG...ACCTGTCCGGGTGCCTCTGTGGGTACGTCCTGGGAGCCTCGTGTTCCCAAAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CAA 90 bp | GCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTaGGCTGTACGCAAGGACTGCCCTCCTGGTCAGCTGGACCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: APGLGLRMGHWVPLS*AVRKDCPPGQLDQK Trigger: TTTTTGGTCCAGCTGACCAGGAGGGCAGTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000148589.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGAACCAGGAGTTCTAGCTaGACCGGGGCTGGGCCTACG | + |
|
Preference number: 2 (lower is better) Translates to: AAAVAFRTHTSFCLVQVRTRSSS*TGAGPT Trigger: CGTAGGCCCAGCCCCGGTGCAGCTAGAACTCCTGGT...TCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTTGGGAACACGAGGCTCCCAGGACGTACCCACAGAGGCACCCGGACAGGTATAGCACCTCCAAGATaGTTCTGCGGGGCCGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: VFGNTRLPGRTHRGTRTGIAPPR*FCGADC Trigger: GCAGTCGGCCCCGCAGAACCATCTTGGAGGTGCTAT...ACCTGTCCGGGTGCCTCTGTGGGTACGTCCTGGGAGCCTCGTGTTCCCAAAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCTCTGCCTGTGGCCAGTaGGATGACCGCCCATGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: AAVAFRTHTSFCLVQVRVSACGQ*DDRPWQ Trigger: TTGCCATGGGCGGTCATCTCACTGGCCACAGGCAGA...GACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR-3UTR CCA 90 bp | GGCCATGAGCCACTCGTTCCTGAATGGCTGCTCGGAAGGGGGCCACACCAGTTCTGTGTCTGGTGTTTTTaGGAACACGAGGCTCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GHEPLVPEWLLGRGPHQFCVWCF*EHEAPR Trigger: CCTGGGAGCCTCGTGTTCCCAAAAACACCAGACACA...GAACTGGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGGCTCATGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CAA 90 bp | TCAGTGGTCAGGTCACACTGCTTTGGAGCTCCAGTACTCACCAGTTaGGCCATGAGCCACTCGTTCCTGAATGGCTGCTCGGAAGGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SVVRSHCFGAPVLTS*AMSHSFLNGCSEGG Trigger: GCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGTGAGTACTGGAGCTCCAAAGCAGTGTGACCTGACCACTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTCAGGATGCGTAGACGGAGACTCCAGGATGACTGCAGGGATTGTTGTAGAGGGTCAGACGGGCAGTaGAGCCCGCACAGCTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: EVRMRRRRLQDDCRDCCRGSDGQ*SPHSSM Trigger: CATAGAGCTGTGCGGGCTGCACTGCCCGTCTGACCC...TCTACAACAATCCCTGCAGTCATCCTGGAGTCTCCGTCTACGCATCCTGACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTCAGGATGCGTAGACGGAGACTCCAGGATGACTGCAGGGATTGTTGTAGAGAGCCAGGCAGAGCTTaGCCTCCACCCATCCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: EVRMRRRRLQDDCRDCCREPGRA*PPPIHL Trigger: CAGGTGGATGGGTGGAGGCCAAGCTCTGCCTGGCTC...TCTACAACAATCCCTGCAGTCATCCTGGAGTCTCCGTCTACGCATCCTGACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR TCA 90 bp | GGCCATGAGCCACTCGTTCCTGAATGGCTGCTCGGAAGGGGGCCACACCAGTTCGGCTCTTCCGGAATATaGACCTCCAGAAGTTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GHEPLVPEWLLGRGPHQFGSSGI*TSRSSS Trigger: TGAAGAACTTCTGGAGGTTCATATTCCGGAAGAGCC...GAACTGGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGGCTCATGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCTCCAGTACTCACCAGTTTGGCCATGAGCCACTCGTTCCTGAATGGCTGCACTTGGCAGAACTGCTaGGTGTGGGCCTCCGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GAPVLTSLAMSHSFLNGCTWQNC*VWASEL Trigger: TAACTCGGAGGCCCACACCCAGCAGTTCTGCCAAGT...GCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGTGAGTACTGGAGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCTCCAGTACTCACCAGTTTGGCCATGAGCCACTCGTTCCTGAATGGCTGCTCCAGGCACAACACTTaGCAGAACTGCTGGGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GAPVLTSLAMSHSFLNGCSRHNT*QNCWVW Trigger: CCACACCCAGCAGTTCTGCCAAGTGTTGTGCCTGGA...GCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGTGAGTACTGGAGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTGTGGGCCTCCGAGTTAGAGGGCAAAATGAATACAACATCACCAGCAGCAGGCCCCAGCTCATGCTaGTCATCACCCAGACATGGG | + |
|
Preference number: 2 (lower is better) Translates to: WVWASELEGKMNTTSPAAGPSSC*SSPRHG Trigger: CCCATGTCTGGGTGATGACCAGCATGAGCTGGGGCC...TGCTGCTGGTGATGTTGTATTCATTTTGCCCTCTAACTCGGAGGCCCACACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CAA 90 bp | AGAAGCGCACTGCCTCCTAGCTGCAGCAGCCTACGATGTAGCTTCTaGGCCACAAAGTTGAACTTGGCATATGAGGAATCCCCGAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RSALPPSCSSLRCSF*ATKLNLAYEESPRP Trigger: AGGCCTCGGGGATTCCTCATATGCCAAGTTCAACTTTGTGGCCAAGAAGCTACATCGTAGGCTGCTGCAGCTAGGAGGCAGTGCGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCAAGAATAGTGCATGCTaGCTCTTGGCTGGGACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: AAVAFRTHTSFCLVQVRVKNSAC*LLAGTS Trigger: GGAAGTCCCAGCCAAGAGCCAGCATGCACTATTCTT...GACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCACATATACCTTCTGCTCCTGCAGGTGTCAGAGGCTAAGTTTCAGCCATCCCTTTGACAGAGGGAGCTaGACGGCAGGCTCTTCCGGA | + |
|
Preference number: 2 (lower is better) Translates to: CTYTFCSCRCQRLSFSHPFDRGS*TAGSSG Trigger: TCCGGAAGAGCCTGCCGTCCAGCTCCCTCTGTCAAA...GGGATGGCTGAAACTTAGCCTCTGACACCTGCAGGAGCAGAAGGTATATGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGGTCAGCTCTGGGGGTCATGCCTAACAGCTGGTGTAGGCAGCCCACACACGTTAACTCATGTTTATaGACCTGCAGACAGACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PRSALGVMPNSWCRQPTHVNSCL*TCRQTD Trigger: ATCTGTCTGTCTGCAGGTCCATAAACATGAGTTAAC...GTGTGTGGGCTGCCTACACCAGCTGTTAGGCATGACCCCCAGAGCTGACCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR TCA 90 bp | GCAGACAGACAGATTTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGCAGAATGAAGGGGTCTaGGAGAAAACCAGGAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ADRQICPFPMLRRLGPWWQNEGV*EKTRSS Trigger: AGAACTCCTGGTTTTCTCTCAGACCCCTTCATTCTG...CCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCCCTTGCCTTCTCCAATaGACAGATCTCAGGATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: AAVAFRTHTSFCLVQVRVPCLLQ*TDLRIN Trigger: GTTTATCCTGAGATCTGTTCATTGGAGAAGGCAAGG...GACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTCAGGATGCGTAGACGGAGACTCCAGGATGACTGCAGGGATTGTTGTAGATTTGCCCATTCCCAATaGTCAGGAGACTTGGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: EVRMRRRRLQDDCRDCCRFAHSQ*SGDLVP Trigger: AGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAA...TCTACAACAATCCCTGCAGTCATCCTGGAGTCTCCGTCTACGCATCCTGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR TCA 90 bp | TTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACTGAGCCAGAATGAAGGGGTCTaGGAGAAAACCAGGAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPIPNAQETWSLVAFQLSQNEGV*EKTRSS Trigger: AGAACTCCTGGTTTTCTCTCAGACCCCTTCATTCTG...GCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTCAGGATGCGTAGACGGAGACTCCAGGATGACTGCAGGGATTGTTGTAGAAATGCTCAGGAGACTTaGTCCCTGGTGGCTTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: EVRMRRRRLQDDCRDCCRNAQET*SLVAFQ Trigger: TTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATT...TCTACAACAATCCCTGCAGTCATCCTGGAGTCTCCGTCTACGCATCCTGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR CAA 90 bp | CATGAATTGCAGAGTCAACTAGGAACAGAGCTAGACCTTGGGCATTaGGAGGCTTCAGGGTCTGGATGGGCCCTTGCAAAACAAAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HELQSQLGTELDLGH*EASGSGWALAKQRQ Trigger: TTGCCTTTGTTTTGCAAGGGCCCATCCAGACCCTGAAGCCTCCAAATGCCCAAGGTCTAGCTCTGTTCCTAGTTGACTCTGCAATTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCTTCAGACGAGTCTGGTACTTTACCACAGCCACAAGGATCTGTAGCCTCCTCTTGGCCACAAAGTTaGACTTGGCATATGAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: APSDESGTLPQPQGSVASSWPQS*TWHMRN Trigger: ATTCCTCATATGCCAAGTTCAACTTTGTGGCCAAGA...GGAGGCTACAGATCCTTGTGGCTGTGGTAAAGTACCAGACTCGTCTGAAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CAA 90 bp | CCAACACAAATCACACCCCCTCCACCTGATCATTCTTTCAGTTCTTaGGAAAGAATAGTGCATGCTGGCTCTTGGCTGGGACTTCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PTQITPPPPDHSFSS*ERIVHAGSWLGLPN Trigger: ATTTGGAAGTCCCAGCCAAGAGCCAGCATGCACTATTCTTTCCAAAGAACTGAAAGAATGATCAGGTGGAGGGGGTGTGATTTGTGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR CCA 90 bp | GGCATGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCCTTCTGACGACACAGTaGACAGCACACACGGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GMYSLGIGDNKSLLITRILLTTQ*TAHTAQ Trigger: CTGGGCCGTGTGTGCTGTCCACTGTGTCGTCAGAAG...GATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR TCA 90 bp | GGCATGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCGACACTGGGTTCCACTaGGTTTGGCTGTACGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GMYSLGIGDNKSLLITRIDTGFH*VWLYAR Trigger: CCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTC...GATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR TCA 90 bp | GGCATGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCCTGTTTTCCACAAGCTaGCAGACAGAACCGAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GMYSLGIGDNKSLLITRILFSTS*QTEPRF Trigger: GAACCTCGGTTCTGTCTGTCAGCTTGTGGAAAACAG...GATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR TCA 72 bp | AGGGACCCCAGGGCCAAGGGCCAGGATGCAGGGCTGTaGCGGATGCAGTCCGCATTGGGCGCTGGGGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RDPRAKGQDAGL*RMQSALGAGVH Trigger: ATGGACCCCAGCGCCCAATGCGGACTGCATCCGTCACAGCCCTGCATCCTGGCCCTTGGCCCTGGGGTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 72 bp | CCAGGGCCAAGGGCCAGGATGCAGGGCTGTGACGGATaGAGTCCGCATTGGGCGCTGGGGTCCATCAGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: PGPRARMQGCDG*SPHWALGSISS Trigger: CGAGCTGATGGACCCCAGCGCCCAATGCGGACTGCATCCGTCACAGCCCTGCATCCTGGCCCTTGGCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR TCA 72 bp | CGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTaGGTTTGGCTGTACGCAAGGACTGCCCTCCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RGWAYVWDTGFH*VWLYARTALLV Trigger: GACCAGGAGGGCAGTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000148589.9 |
||
| 3UTR GCA 72 bp | ACCAGTTTGGCCATGAGCCACTCGTTCCTGAATGGCTaGTCGGAAGGGGGCCACACCAGTTCCAGCCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TSLAMSHSFLNG*SEGGHTSSSPH Trigger: GTGGGGGCTGGAACTGGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTGGAACTCAGAAATCCACCTGCCTCTaGCTCCCAAGTGCTGCGATCAAAGGTGTGCGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPGTQKSTCL*LPSAAIKGVRH Trigger: GTGGCGCACACCTTTGATCGCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAGGCCAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR CCA 72 bp | CAGTTGACTCCAGGGCCCTGGCAGCGGATGGGTCTCTaGCCTCCAGTTCCGGTTTACTGTCTGGAGTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QLTPGPWQRMGL*PPVPVYCLEFW Trigger: CCAGAACTCCAGACAGTAAACCGGAACTGGAGGCCAGAGACCCATCCGCTGCCAGGGCCCTGGAGTCAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR CCA 72 bp | GAGGTTCCACACAGTACAGGGCTGAGGCAGCCCTGGTaGGTCAGGGACACCTGGTTCCCGTGGCTTAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: EVPHSTGLRQPW*VRDTWFPWLKC Trigger: ACACTTAAGCCACGGGAACCAGGTGTCCCTGACCCACCAGGGCTGCCTCAGCCCTGTACTGTGTGGAACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | GTAGCCTCCTGGGATGAGCCAGTAGGGAGGAAGCAATaGAGAAGGCCCGTGGGCGGATCCGAGGGATTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VASWDEPVGRKQ*RRPVGGSEGLG Trigger: ACCTAATCCCTCGGATCCGCCCACGGGCCTTCTCCATTGCTTCCTCCCTACTGGCTCATCCCAGGAGGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | ACTCACCAGTTTGGCCATGAGCCACTCGTTCCTGAATaGCTGCTCGGAAGGGGGCCACACCAGTTCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: THQFGHEPLVPE*LLGRGPHQFQP Trigger: GGGCTGGAACTGGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGTGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTGTCCTCCTGGAACTCGCTCTGTAGACCAGGCTGGCCTGGAACTCAGAAAGCCCTGGAGGGCTCTTaGCCCACCACTAGCAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: WLSSWNSLCRPGWPGTQKALEGS*PTTSRC Trigger: GCATCTGCTAGTGGTGGGCAAAGAGCCCTCCAGGGC...TTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGCGAGTTCCAGGAGGACAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 72 bp | GGGACTAATGGGAATAGCACGGGGTCAGACGGGCAGTaGAGCCCGCACAGCTCTATGTCCTTTGGAGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GTNGNSTGSDGQ*SPHSSMSFGGL Trigger: AAGCCCTCCAAAGGACATAGAGCTGTGCGGGCTGCACTGCCCGTCTGACCCCGTGCTATTCCCATTAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR GCA 72 bp | CCCAGACATGGGGGCAGAAGCGCACTGCCTCCTAGCTaGAGCAGCCTACGATGTAGCTTCTTGGCCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PRHGGRSALPPS*SSLRCSFLATK Trigger: CTTTGTGGCCAAGAAGCTACATCGTAGGCTGCTGCAGCTAGGAGGCAGTGCGCTTCTGCCCCCATGTCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR GCA 72 bp | AGCTCCCAGACAAGTGGCCCCAGCTCTCGAAGCCGGTaGTGCACATATACCTTCTGCTCCTGCAGGTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSQTSGPSSRSR*CTYTFCSCRCQ Trigger: CTGACACCTGCAGGAGCAGAAGGTATATGTGCAGCACCGGCTTCGAGAGCTGGGGCCACTTGTCTGGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | TGTCTGACTGCTCCAACAGGGTTTCCTTCCCAGCAGTaGAGGCCCTGCCCATGGGCGGGCCAACACAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: CLTAPTGFPSQQ*RPCPWAGQHKS Trigger: TGATTTGTGTTGGCCCGCCCATGGGCAGGGCCTCCACTGCTGGGAAGGAAACCCTGTTGGAGCAGTCAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR CCA 72 bp | GGATGGGTCTCTGGCCTCCAGTTCCGGTTTACTGTCTaGAGTTCTGGCACCCAGAGGGGCCCTGAGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: GWVSGLQFRFTV*SSGTQRGPEII Trigger: GATGATCTCAGGGCCCCTCTGGGTGCCAGAACTCCAGACAGTAAACCGGAACTGGAGGCCAGAGACCCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTCCAGTACTCACCAGTTTGGCCATGAGCCACTCGTTCCTGAATGGCTGCCCAGTGACCCTCTGGTaGGTGATCACAGGTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GAPVLTSLAMSHSFLNGCPVTLW*VITGAR Trigger: CCTGGCACCTGTGATCACCAACCAGAGGGTCACTGG...GCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGTGAGTACTGGAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGGGCCACACCAGTTCCAGCCCCCACCATGATAATGGGTGTGTCTGGTGTTGTCCAGGCACAACACTaGGCAGAACTGCTGGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KGATPVPAPTMIMGVSGVVQAQH*AELLGV Trigger: CACACCCAGCAGTTCTGCCAAGTGTTGTGCCTGGAC...AACACCAGACACACCCATTATCATGGTGGGGGCTGGAACTGGTGTGGCCCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR TCA 72 bp | AGCTGGCGGTATAGCCCAGCTTCTGCCTGTGGCCAGTaGGATGACCGCCCATGGCAAGCACATAGGGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SWRYSPASACGQ*DDRPWQAHRVL Trigger: AAGAACCCTATGTGCTTGCCATGGGCGGTCATCTCACTGGCCACAGGCAGAAGCTGGGCTATACCGCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR GCA 72 bp | TGGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTaGTGCGATCAAAGGTGTGCGCCACCACTGCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: WNSEIHLPLPPK*CDQRCAPPLPG Trigger: ACCAGGCAGTGGTGGCGCACACCTTTGATCGCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR CCA 72 bp | AGACAGAACCGAGGTTCCTTAGCGCCCAGCTGCCCTTaGACCTGTCTGACTGCTCCAACAGGGTTTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RQNRGSLAPSCP*TCLTAPTGFPS Trigger: GGAAGGAAACCCTGTTGGAGCAGTCAGACAGGTCCAAGGGCAGCTGGGCGCTAAGGAACCTCGGTTCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR CCA 72 bp | AGGCAGCCCTGGTGGGTCAGGGACACCTGGTTCCCGTaGCTTAAGTGTGAAAAACTGATTGGGGTCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RQPWWVRDTWFP*LKCEKLIGVQA Trigger: TGCCTGGACCCCAATCAGTTTTTCACACTTAAGCCACGGGAACCAGGTGTCCCTGACCCACCAGGGCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | CCGCTGTATGTGGAAAGTCGCATAGCACCTCCAAGATaGTTCTGCGGGGCCGACTGCAGTACTCCCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLYVESRIAPPR*FCGADCSTPRA Trigger: AGCTCTGGGAGTACTGCAGTCGGCCCCGCAGAACCATCTTGGAGGTGCTATGCGACTTTCCACATACAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR TCA 72 bp | GTTTACTGTCTGGAGTTCTGGCACCCAGAGGGGCCCTaGGATCATCCTCTCCATCTGCTGGTAGCTGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VYCLEFWHPEGP*DHPLHLLVAGT Trigger: TGTGCCAGCTACCAGCAGATGGAGAGGATGATCTCAGGGCCCCTCTGGGTGCCAGAACTCCAGACAGTAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR TCA 72 bp | GAGGAATCCCCGAGGCCTAGGACAGCAAAATCCATTTaGCAGAGGGAGCTGGACGGCAGGCTCTTCCGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: EESPRPRTAKSI*QRELDGRLFRN Trigger: ATTCCGGAAGAGCCTGCCGTCCAGCTCCCTCTGTCAAATGGATTTTGCTGTCCTAGGCCTCGGGGATTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR GCA 72 bp | GCAGTGCAGGCCTCTCCTGGTAGTTACTGTGGCTGCTaGTGTTGCCTTCAGGACACACACCAGCTTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AVQASPGSYCGC*CCLQDTHQLLS Trigger: AGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGCAGCCACAGTAACTACCAGGAGAGGCCTGCACTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR GCA 72 bp | TGTGCAGTGCAGGCCTCTCCTGGTAGTTACTGTGGCTaGTGCTGTTGCCTTCAGGACACACACCAGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CAVQASPGSYCG*CCCLQDTHQLL Trigger: CAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGCAGCCACAGTAACTACCAGGAGAGGCCTGCACTGCACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR CCA 72 bp | AAGCCAGGAGCTCAAAGAAGGAACGGCGGGGCACACTaGCAATGTCCAAGTACTGGGACACGAGGTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: KPGAQRRNGGAH*QCPSTGTRGST Trigger: TGTGGAACCTCGTGTCCCAGTACTTGGACATTGCCAGTGTGCCCCGCCGTTCCTTCTTTGAGCTCCTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | GAGCAGAGACCATGGCGGGGCTCCTTCAGACGAGTCTaGTACTTTACCACAGCCACAAGGATCTGTAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: EQRPWRGSFRRV*YFTTATRICSL Trigger: GAGGCTACAGATCCTTGTGGCTGTGGTAAAGTACCAGACTCGTCTGAAGGAGCCCCGCCATGGTCTCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTGGCTTGTGCAGTGCAGGCCTCTCCTGGTAGTTACTGTGGCTGCTGCTGTTGCAGACAGACAGATTaGCCCATTCCCAATGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLACAVQASPGSYCGCCCCRQTD*PIPNAQ Trigger: CTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGCA...ACAGCAGCAGCCACAGTAACTACCAGGAGAGGCCTGCACTGCACAAGCCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR TCA 72 bp | AGAGTGGTGTTGGTCTGGTCCCTGTTTTCCACAAGCTaGCAGACAGAACCGAGGTTCCTTAGCGCCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RVVLVWSLFSTS*QTEPRFLSAQL Trigger: CAGCTGGGCGCTAAGGAACCTCGGTTCTGTCTGTCAGCTTGTGGAAAACAGGGACCAGACCAACACCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 72 bp | CCCAGCTCTCGAAGCCGGTGCTGCACATATACCTTCTaGTCCTGCAGGTGTCAGAGGCTAAGTTTCAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PSSRSRCCTYTF*SCRCQRLSFSH Trigger: ATGGCTGAAACTTAGCCTCTGACACCTGCAGGAGCAGAAGGTATATGTGCAGCACCGGCTTCGAGAGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | CTCAATTCCAGCAGCTTCTCTCGCTCCAGCGCATGTTaGGAGAGACAAGCCAGGAGCTCAAAGAAGGAACGG | + |
|
Preference number: 3 (lower is better) Translates to: LNSSSFSRSSAC*ERQARSSKKER Trigger: CCGTTCCTTCTTTGAGCTCCTGGCTTGTCTCTCCCAACATGCGCTGGAGCGAGAGAAGCTGCTGGAATTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR TCA 72 bp | GGGACACCTGGTTCCCGTGGCTTAAGTGTGAAAAACTaGTTGGGGTCCAGGCACAACACTTGGCAGAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GTPGSRGLSVKN*LGSRHNTWQNC Trigger: GCAGTTCTGCCAAGTGTTGTGCCTGGACCCCAATCAGTTTTTCACACTTAAGCCACGGGAACCAGGTGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR GCA 72 bp | GCGCAGTGTCTGCTGGAGCCTAGCAAGGTAGGCAGATaGATCTGCAGTGGAGAGTCGTCCTTCTTCTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AQCLLEPSKVGR*ICSGESSFFLK Trigger: TTTCAAGAAGAAGGACGACTCTCCACTGCAGATGCATCTGCCTACCTTGCTAGGCTCCAGCAGACACTGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | TGTTGGAATCACACATTTGTGTCCACTCTCACCAGCTaGACTACGAGCTGGCGGTATAGCCCAGCTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CWNHTFVSTLTS*TTSWRYSPASA Trigger: GGCAGAAGCTGGGCTATACCGCCAGCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTGATTCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR CCA 72 bp | GAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGAAGGCTaGCTTGTGCAGTGCAGGCCTCTCCTGGTAGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: ESSLGWVGAFEG*LVQCRPLLVVT Trigger: AGTAACTACCAGGAGAGGCCTGCACTGCACAAGCCAGCCTTCAAAAGCTCCCACCCAACCTAAGCTACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR CCA 72 bp | TTATCTTCTCCCAAAGATCTCCTACCCAGGGGTCAATaGCAGCATCAGGCCCCAGCTCATGCTGGTCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSSPKDLLPRGQ*QHQAPAHAGHH Trigger: GTGATGACCAGCATGAGCTGGGGCCTGATGCTGCCATTGACCCCTGGGTAGGAGATCTTTGGGAGAAGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | GGTACTTTACCACAGCCACAAGGATCTGTAGCCTCCTaGGATGAGCCAGTAGGGAGGAAGCAATGGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GTLPQPQGSVAS*DEPVGRKQWRR Trigger: CCTTCTCCATTGCTTCCTCCCTACTGGCTCATCCCAGGAGGCTACAGATCCTTGTGGCTGTGGTAAAGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR GCA 72 bp | GACTTGGTCCCTGGTGGCTTTTCAACTGAGCTGAGCTaGACAGGTGTTATGGGACTAATGGGAATAGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: DLVPGGFSTELS*TGVMGLMGIAR Trigger: CCGTGCTATTCCCATTAGTCCCATAACACCTGTGCAGCTCAGCTCAGTTGAAAAGCCACCAGGGACCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR GCA 72 bp | TTAGGTCCCAGGTTACCACTAGAACAGAGGTCAGGATaGGTAGACGGAGACTCCAGGATGACTGCAGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: LGPRLPLEQRSG*VDGDSRMTAGI Trigger: AATCCCTGCAGTCATCCTGGAGTCTCCGTCTACGCATCCTGACCTCTGTTCTAGTGGTAACCTGGGACCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR GCA 72 bp | TGGGCATTTGGAGGCTTCAGGGTCTGGATGGGCCCTTaGAAAACAAAGGCAATATTGATCCCAGCTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WAFGGFRVWMGP*KTKAILIPAPL Trigger: CAGAGGAGCTGGGATCAATATTGCCTTTGTTTTGCAAGGGCCCATCCAGACCCTGAAGCCTCCAAATGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR GCA 72 bp | CCAACTCCTGTCCTATCTAACTTGAATATACTCACCTaGTCCCGGGAGAAGGCTGTAACCAGGGTCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PTPVLSNLNILT*SREKAVTRVSQ Trigger: CTGGCTGACCCTGGTTACAGCCTTCTCCCGGGAGCAGGTGAGTATATTCAAGTTAGATAGGACAGGAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | CTCCAGAAGTTCTTCATGTTGTCAGGAGGGTCTCCTTaGCCTGTGGTCGCACAAACAAATATCACCAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LQKFFMLSGGSP*PVVAQTNITRG Trigger: GCCCCTGGTGATATTTGTTTGTGCGACCACAGGCCAAGGAGACCCTCCTGACAACATGAAGAACTTCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132128.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGGGCCACACCAGTTCCAGCCCCCACCATGATAATGGGTGTGTCTGGTGTTCTACGATGTAGCTTCTaGGCCACAAAGTTGAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: KGATPVPAPTMIMGVSGVLRCSF*ATKLNL Trigger: CAAGTTCAACTTTGTGGCCAAGAAGCTACATCGTAG...AACACCAGACACACCCATTATCATGGTGGGGGCTGGAACTGGTGTGGCCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR TCA 72 bp | GCTGCGATCAAAGGTGTGCGCCACCACTGCCTGGTCTaGGAGCCTTTCTTATGCTTGTTATATAGGACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AAIKGVRHHCLV*EPFLCLLYRTQ Trigger: CTGAGTCCTATATAACAAGCATAAGAAAGGCTCTCAGACCAGGCAGTGGTGGCGCACACCTTTGATCGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR GCA 72 bp | ATGGACCTGCAGACAGACAGATTTGCCCATTCCCAATaGTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: MDLQTDRFAHSQ*SGDLVPGGFST Trigger: AGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGCAGGTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR GCA 72 bp | TGTCTGCTGGAGCCTAGCAAGGTAGGCAGATGCATCTaGAGTGGAGAGTCGTCCTTCTTCTTGAAAAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: CLLEPSKVGRCI*SGESSFFLKNG Trigger: TCCATTTTTCAAGAAGAAGGACGACTCTCCACTGCAGATGCATCTGCCTACCTTGCTAGGCTCCAGCAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CCA 72 bp | AGAGCTAGACCTTGGGCATTTGGAGGCTTCAGGGTCTaGATGGGCCCTTGCAAAACAAAGGCAATATTGATC | + |
|
Preference number: 3 (lower is better) Translates to: RARPWAFGGFRV*MGPCKTKAILI Trigger: GATCAATATTGCCTTTGTTTTGCAAGGGCCCATCCAGACCCTGAAGCCTCCAAATGCCCAAGGTCTAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR-3UTR CAA 90 bp | GACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCTGCAGCCCTTGCCTTCTCATTCTTTCAGTTCTTaGGAAAGAATAGTGCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: DTHQLLSGAGESLQPLPSHSFSS*ERIVHA Trigger: AGCATGCACTATTCTTTCCAAAGAACTGAAAGAATG...AGAAGGCAAGGGCTGCAGACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR TCA 72 bp | GTGCAGGTGAGAGTCTGCAGCCCTTGCCTTCTCCAATaGACAGATCTCAGGATAAACAGAATCACTGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VQVRVCSPCLLQ*TDLRINRITVG Trigger: TCCAACAGTGATTCTGTTTATCCTGAGATCTGTTCATTGGAGAAGGCAAGGGCTGCAGACTCTCACCTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR GCA 72 bp | TTAACTCATGTTTATGGACCTGCAGACAGACAGATTTaGCCATTCCCAATGCTCAGGAGACTTGGTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTHVYGPADRQI*PFPMLRRLGPW Trigger: CCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGCAGGTCCATAAACATGAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR TCA 72 bp | GCAGATGCATCTGCAGTGGAGAGTCGTCCTTCTTCTTaGAAAATGGACATAAGGGCTTCCGAAACATCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: ADASAVESRPSS*KMDIRASETSV Trigger: TACGGATGTTTCGGAAGCCCTTATGTCCATTTTTCAAGAAGAAGGACGACTCTCCACTGCAGATGCATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCCAATGCTCAGGAGACTaGGTCCCTGGTGGCTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GMYSLGIGDNKSLLITRIQCSGD*VPGGFS Trigger: TGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTG...GATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCACTATAAATGCAGATTaGGGGCAGAATGAAGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GMYSLGIGDNKSLLITRITINAD*GQNEGV Trigger: GACCCCTTCATTCTGCCCCAAATCTGCATTTATAGT...GATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR TCA 72 bp | TGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTaGTTACCAGAATCCAAGCGTGCATGGACTTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CIVLVLVITSLC*LPESKRAWTSK Trigger: CTTTGAAGTCCATGCACGCTTGGATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| CDS-3UTR CCA 90 bp | CCCTGGCAGCGGATGGGTCTCTGGCCTCCAGTTCCGGTTTACTGTCTGGAGTTCGGGCTGAGGCAGCCCTaGTGGGTCAGGGACACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWQRMGLWPPVPVYCLEFGLRQP*WVRDTW Trigger: CCAGGTGTCCCTGACCCACCAGGGCTGCCTCAGCCC...GAACTCCAGACAGTAAACCGGAACTGGAGGCCAGAGACCCATCCGCTGCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTGGGCTGAGGCAGCCCTaGTGGGTCAGGGACACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLAAPGLGLRMGHWVPLSGLRQP*WVRDTW Trigger: CCAGGTGTCCCTGACCCACCAGGGCTGCCTCAGCCC...ACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAGTGGAGGCCCTGCCCATGGGCGGGCCAACACAAATCACACCCCCTCCATAGCACCTCCAAGATaGTTCTGCGGGGCCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSGGPAHGRANTNHTPSIAPPR*FCGADC Trigger: GCAGTCGGCCCCGCAGAACCATCTTGGAGGTGCTAT...GGAGGGGGTGTGATTTGTGTTGGCCCGCCCATGGGCAGGGCCTCCACTGCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR CAA 72 bp | CCACAACCTGCCCCTCACCTTCCTGCTCTTCCACAGTaGACTCCAGGGCCCTGGCAGCGGATGGGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPAPHLPALPQ*TPGPWQRMGLW Trigger: CCAGAGACCCATCCGCTGCCAGGGCCCTGGAGTCAACTGTGGAAGAGCAGGAAGGTGAGGGGCAGGTTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR TCA 90 bp | CCCAGCAGTGGAGGCCCTGCCCATGGGCGGGCCAACACAAATCACACCCCCTCCATCAGCCGAACATCCTaGAAGTGTTGGGGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSSGGPAHGRANTNHTPSISRTS*KCWGPV Trigger: CACTGGCCCCCAACACTTTCAGGATGTTCGGCTGAT...GGAGGGGGTGTGATTTGTGTTGGCCCGCCCATGGGCAGGGCCTCCACTGCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR TCA 90 bp | TCGGAAGGGGGCCACACCAGTTCCAGCCCCCACCATGATAATGGGTGTGTCTGGGGTCTCTGGCAGCCTTaGTCAGTGCCCTCCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEGGHTSSSPHHDNGCVWGLWQP*SVPSLH Trigger: GTGCAGGGAGGGCACTGATCAAGGCTGCCAGAGACC...CCAGACACACCCATTATCATGGTGGGGGCTGGAACTGGTGTGGCCCCCTTCCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| CDS-3UTR TCA 90 bp | CACCTGCCTCTGCCTCCCAAGTGCTGCGATCAAAGGTGTGCGCCACCACTGCCTCACCCAGAGGGGCCCTaGGATCATCCTCTCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLPLPPKCCDQRCAPPLPHPEGP*DHPLHL Trigger: CAGATGGAGAGGATGATCTCAGGGCCCCTCTGGGTG...AGGCAGTGGTGGCGCACACCTTTGATCGCAGCACTTGGGAGGCAGAGGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTCTCTCCGCCTCGTCCTaGGCTGTACCAGTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLAAPGLGLRMGHWVPLSLSASS*AVPVWL Trigger: CAGCCAGACTGGTACAGCCCAGGACGAGGCGGAGAG...ACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000148589.9 |
||
| CDS-3UTR CCA 90 bp | GCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTACTCTCCGCCTCGTCCTaGGCTGTACCAGTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APGLGLRMGHWVPLSLAVLSASS*AVPVWL Trigger: CAGCCAGACTGGTACAGCCCAGGACGAGGCGGAGAG...TACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000148589.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCGGGCTGAGGCAGCCCTaGTGGGTCAGGGACACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAVAFRTHTSFCLVQVRVGLRQP*WVRDTW Trigger: CCAGGTGTCCCTGACCCACCAGGGCTGCCTCAGCCC...GACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTGCCTCTGCCTCCCAAGTGCTGCGATCAAAGGTGTGCGCCACCACTGCCATAGCACCTCCAAGATaGTTCTGCGGGGCCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPASASQVLRSKVCATTAIAPPR*FCGADC Trigger: GCAGTCGGCCCCGCAGAACCATCTTGGAGGTGCTAT...GGCAGTGGTGGCGCACACCTTTGATCGCAGCACTTGGGAGGCAGAGGCAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTACAGCTCCCAGACAAGTaGCCCCAGCTCTCGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: APGLGLRMGHWVPLSLAVQLPDK*PQLSKP Trigger: CGGCTTCGAGAGCTGGGGCCACTTGTCTGGGAGCTG...TACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGCTTGTGCAGTGCAGGCCTCTCCTGGTAGTTACTGTGGCTGCTGCTGTGGCCCTGGCAGCGGATaGGTCTCTGGCCTCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLACAVQASPGSYCGCCCGPGSG*VSGLQF Trigger: GAACTGGAGGCCAGAGACCCATCCGCTGCCAGGGCC...ACAGCAGCAGCCACAGTAACTACCAGGAGAGGCCTGCACTGCACAAGCCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGCACCCGGACAGGTCCTaGTTGCCCAGGATTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAAPGLGLRMGHWVPLSLHPDRS*LPRIQG Trigger: TCCCTGAATCCTGGGCAAGCAGGACCTGTCCGGGTG...CAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTCACCCGGACAGGTCCTaGTTGCCCAGGATTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLAAPGLGLRMGHWVPLSHPDRS*LPRIQG Trigger: TCCCTGAATCCTGGGCAAGCAGGACCTGTCCGGGTG...ACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR GCA 90 bp | TGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTTCGTTCCTGAATGGCTaGTCGGAAGGGGGCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: CTGAGPTYGTLGSTEFGCSFLNG*SEGGHT Trigger: GGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGA...ACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGTCGTTCCTGAATGGCTaGTCGGAAGGGGGCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LAAPGLGLRMGHWVPLSLSFLNG*SEGGHT Trigger: GGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGA...CAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGGGCCAGTGACCCTCTaGTTGGTGATCACAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAAPGLGLRMGHWVPLSLGPVTL*LVITGA Trigger: GGCACCTGTGATCACCAACCAGAGGGTCACTGGCCC...CAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | TGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTCAGAACTGCTGGGTGTaGGCCTCCGAGTTAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTGAGPTYGTLGSTEFGCQNCWV*ASELEG Trigger: GCCCTCTAACTCGGAGGCCCACACCCAGCAGTTCTG...ACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCCTGGCAGCGGATGGGTCTCTGGCCTCCAGTTCCGGTTTACTGTCTGGAGTCCAGGCACAACACTTaGCAGAACTGCTGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPWQRMGLWPPVPVYCLESRHNT*QNCWVW Trigger: CCACACCCAGCAGTTCTGCCAAGTGTTGTGCCTGGA...CTCCAGACAGTAAACCGGAACTGGAGGCCAGAGACCCATCCGCTGCCAGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR CCA 90 bp | CTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGCCACTCGTTCCTGAATaGCTGCTCGGAAGGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAAPGLGLRMGHWVPLSLPLVPE*LLGRGP Trigger: TGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGG...CAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCCACACAGTACAGGGCTaGGGCAGCCCTGGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAVAFRTHTSFCLVQVRVHTVQG*GSPGGS Trigger: TGACCCACCAGGGCTGCCTCAGCCCTGTACTGTGTG...GACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR GCA 90 bp | TGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTCGGACAGGTCCTGCTTaGCCAGGATTCAGGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTGAGPTYGTLGSTEFGCRTGPA*PGFRDA Trigger: AGCATCCCTGAATCCTGGGCAAGCAGGACCTGTCCG...ACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGTTTGACAGAGGGAGCTaGACGGCAGGCTCTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAAPGLGLRMGHWVPLSLFDRGS*TAGSSG Trigger: TCCGGAAGAGCCTGCCGTCCAGCTCCCTCTGTCAAA...CAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTTGACAGAGGGAGCTaGACGGCAGGCTCTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLAAPGLGLRMGHWVPLSFDRGS*TAGSSG Trigger: TCCGGAAGAGCCTGCCGTCCAGCTCCCTCTGTCAAA...ACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTACGCAAGGACTGCAGCTCCCAGACAAGTaGCCCCAGCTCTCGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GPTYGTLGSTEFGCTQGLQLPDK*PQLSKP Trigger: CGGCTTCGAGAGCTGGGGCCACTTGTCTGGGAGCTG...CAGTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | TGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTGCCCAGGTTTCAGTCTaGAAGCGCAGTGTCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTGAGPTYGTLGSTEFGCAQVSV*KRSVCW Trigger: CCAGCAGACACTGCGCTTCCAGACTGAAACCTGGGC...ACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR CAA 72 bp | CTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTaGGCTGTACGCAAGGACTGCCCTCCTGGTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLRMGHWVPLS*AVRKDCPPGQL Trigger: CAGCTGACCAGGAGGGCAGTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000148589.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTGAGCTGCACAGGTGTTATGGGACTAATGGGAATAGCACGGGGTCAGACGCACACAGTACAGGGCTaGGGCAGCCCTGGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELSCTGVMGLMGIARGQTHTVQG*GSPGGS Trigger: TGACCCACCAGGGCTGCCTCAGCCCTGTACTGTGTG...CGTCTGACCCCGTGCTATTCCCATTAGTCCCATAACACCTGTGCAGCTCAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR TCA 90 bp | GTTCTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTCCCAGAGCTCTTCCTaGCCTCTGGCAGAGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLAAPGLGLRMGHWVPLSSQSSS*PLAELN Trigger: ATTGAGCTCTGCCAGAGGTCAGGAAGAGCTCTGGGA...ACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR TCA 90 bp | CTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGTCCCAGAGCTCTTCCTaGCCTCTGGCAGAGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LAAPGLGLRMGHWVPLSLSQSSS*PLAELN Trigger: ATTGAGCTCTGCCAGAGGTCAGGAAGAGCTCTGGGA...CAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR TCA 90 bp | CACCTGCCTCTGCCTCCCAAGTGCTGCGATCAAAGGTGTGCGCCACCACTGCCTGGCAAGGGGACTCCATaGGGAATCTCAGGAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLPLPPKCCDQRCAPPLPGKGTP*GISGMS Trigger: TGACATTCCTGAGATTCCTCATGGAGTCCCCTTGCC...AGGCAGTGGTGGCGCACACCTTTGATCGCAGCACTTGGGAGGCAGAGGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTCAGGAGGGTCTCCTTGGCCTGTGGTCGCACAAACAAATATCACCAGGGGCTCTCCGCCTCGTCCTaGGCTGTACCAGTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVRRVSLACGRTNKYHQGLSASS*AVPVWL Trigger: CAGCCAGACTGGTACAGCCCAGGACGAGGCGGAGAG...CCCCTGGTGATATTTGTTTGTGCGACCACAGGCCAAGGAGACCCTCCTGACAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132128.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGACAGAACTGCTGGGTGTaGGCCTCCGAGTTAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAAVAFRTHTSFCLVQVRQNCWV*ASELEG Trigger: GCCCTCTAACTCGGAGGCCCACACCCAGCAGTTCTG...TCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTCCTCCTGGAACTCGCTCTGTAGACCAGGCTGGCCTGGAACTCAGAAAGTAGGGAGGAAGCAATaGAGAAGGCCCGTGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLSSWNSLCRPGWPGTQKVGRKQ*RRPVGG Trigger: TCCGCCCACGGGCCTTCTCCATTGCTTCCTCCCTAC...TTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGCGAGTTCCAGGAGGACAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCTTGTGCAGTGCAGGCCTCTCCTGGTAGTTACTGTGGCTGCTGCTGTTGCCCAGGTTTCAGTCTaGAAGCGCAGTGTCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWLVQCRPLLVVTVAAAVAQVSV*KRSVCW Trigger: CCAGCAGACACTGCGCTTCCAGACTGAAACCTGGGC...AACAGCAGCAGCCACAGTAACTACCAGGAGAGGCCTGCACTGCACAAGCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR CCA 90 bp | TCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGAAGGCTGGCTTGTGCAGACCAGGTGCCTAGGCTaGGAGGGCAGGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGESSLGWVGAFEGWLVQTRCLG*EGRAGR Trigger: CCTTCCTGCCCTGCCCTCCCAGCCTAGGCACCTGGT...CTGCACAAGCCAGCCTTCAAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| CDS-3UTR TCA 90 bp | GGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTACGCAAGGACTGTGTAGCCTCCTGGGATaGGCCAGTAGGGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPTYGTLGSTEFGCTQGLCSLLG*ASREEA Trigger: TGCTTCCTCCCTACTGGCTCATCCCAGGAGGCTACA...CAGTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR TCA 90 bp | GCTACCTTCTCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGAAGGCTGGCTGCTCTTCCACAGTTaGCTCCAGGGCCCTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATFSGESSLGWVGAFEGWLLFHS*LQGPGS Trigger: GCTGCCAGGGCCCTGGAGTCAACTGTGGAAGAGCAG...CCAGCCTTCAAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGAGAAGGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS-3UTR TCA 90 bp | CACACATTTGTGTCCACTCTCACCAGCTGGACTACGAGCTGGCGGTATAGCCCACAGGATGCAGGGCTGTaGCGGATGCAGTCCGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HTFVSTLTSWTTSWRYSPQDAGL*RMQSAL Trigger: CAATGCGGACTGCATCCGTCACAGCCCTGCATCCTG...TGGGCTATACCGCCAGCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| CDS-3UTR GCA 90 bp | GGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTACGCAAGGACTGCGGACAGGTCCTGCTTaGCCAGGATTCAGGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPTYGTLGSTEFGCTQGLRTGPA*PGFRDA Trigger: AGCATCCCTGAATCCTGGGCAAGCAGGACCTGTCCG...CAGTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCAGCGGATGGGTCTCTGGCCTCCAGTTCCGGTTTACTGTCTGGAGTTCAGCTCTCGAAGCCGGTaGTGCACATATACCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PWQRMGLWPPVPVYCLEFSSRSR*CTYTFC Trigger: GCAGAAGGTATATGTGCAGCACCGGCTTCGAGAGCT...GAACTCCAGACAGTAAACCGGAACTGGAGGCCAGAGACCCATCCGCTGCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTAGCTCTCGAAGCCGGTaGTGCACATATACCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLAAPGLGLRMGHWVPLSSSRSR*CTYTFC Trigger: GCAGAAGGTATATGTGCAGCACCGGCTTCGAGAGCT...ACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGAAGTTCTTCATGTTGTCAGGAGGGTCTCCTTGGCCTGTGGTCGCACAACTCTCCGCCTCGTCCTaGGCTGTACCAGTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQKFFMLSGGSPWPVVAQLSASS*AVPVWL Trigger: CAGCCAGACTGGTACAGCCCAGGACGAGGCGGAGAG...TTGTGCGACCACAGGCCAAGGAGACCCTCCTGACAACATGAAGAACTTCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132128.3 ENSMUST00000148589.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCTTTGACAGAGGGAGCTaGACGGCAGGCTCTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AAVAFRTHTSFCLVQVRVFDRGS*TAGSSG Trigger: TCCGGAAGAGCCTGCCGTCCAGCTCCCTCTGTCAAA...GACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | CACACATTTGTGTCCACTCTCACCAGCTGGACTACGAGCTGGCGGTATAGCCCACCACTCGTTCCTGAATaGCTGCTCGGAAGGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTFVSTLTSWTTSWRYSPPLVPE*LLGRGP Trigger: TGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGG...TGGGCTATACCGCCAGCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAATGCTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACTGAGCTGAGCTGCGGCCCCAGCTCATGCTaGTCATCACCCAGACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQCSGDLVPGGFSTELSCGPSSC*SSPRHG Trigger: CCCATGTCTGGGTGATGACCAGCATGAGCTGGGGCC...GCAGCTCAGCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114349.9 |
||
| CDS-3UTR TCA 90 bp | CACCTGCCTCTGCCTCCCAAGTGCTGCGATCAAAGGTGTGCGCCACCACTGCCTGGCTCTTCCGGAATATaGACCTCCAGAAGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLPLPPKCCDQRCAPPLPGSSGI*TSRSSS Trigger: TGAAGAACTTCTGGAGGTTCATATTCCGGAAGAGCC...AGGCAGTGGTGGCGCACACCTTTGATCGCAGCACTTGGGAGGCAGAGGCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR TCA 90 bp | GCTACCTTCTCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGAAGGCTGGCAGGATGCAGGGCTGTaGCGGATGCAGTCCGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ATFSGESSLGWVGAFEGWQDAGL*RMQSAL Trigger: CAATGCGGACTGCATCCGTCACAGCCCTGCATCCTG...CCAGCCTTCAAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGAGAAGGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| CDS-3UTR GCA 90 bp | GACCGCCCATGGCAAGCACATAGGGTTCTTTTCACAACTCTTTCTGCCAGGCCATCGTTCCTGAATGGCTaGTCGGAAGGGGGCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: DRPWQAHRVLFTTLSARPSFLNG*SEGGHT Trigger: GGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGA...TGGCCTGGCAGAAAGAGTTGTGAAAAGAACCCTATGTGCTTGCCATGGGCGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGGCTTGTGCAGTGCAGGCCTCTCCTGGTAGTTACTGTGGCTGCTGCTGTTGTCAGCCAGCCCTTCTaGTCTAGCTTCTGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWLVQCRPLLVVTVAAAVVSQPF*SSFCHS Trigger: TGAATGGCAGAAGCTAGAGCAGAAGGGCTGGCTGAC...AACAGCAGCAGCCACAGTAACTACCAGGAGAGGCCTGCACTGCACAAGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAATCACACATTTGTGTCCACTCTCACCAGCTGGACTACGAGCTGGCGGTAGGCCAAGGGCCAGGATaGAGGGCTGTGACGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LESHICVHSHQLDYELAVGQGPG*RAVTDA Trigger: TGCATCCGTCACAGCCCTGCATCCTGGCCCTTGGCC...TACCGCCAGCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTGATTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCACTTGGCAGAACTGCTaGGTGTGGGCCTCCGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AAVAFRTHTSFCLVQVRVTWQNC*VWASEL Trigger: TAACTCGGAGGCCCACACCCAGCAGTTCTGCCAAGT...GACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTGCAATGTCCAAGTACTaGGACACGAGGTTCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: VLAAPGLGLRMGHWVPLSAMSKY*DTRFHT Trigger: TGTGTGGAACCTCGTGTCCCAGTACTTGGACATTGC...ACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGTGTTATGGGACTAATGGGAATAGCACGGGGTCAGACGGGCAGTGCAATAGCACCTCCAAGATaGTTCTGCGGGGCCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTGVMGLMGIARGQTGSAIAPPR*FCGADC Trigger: GCAGTCGGCCCCGCAGAACCATCTTGGAGGTGCTAT...TGCACTGCCCGTCTGACCCCGTGCTATTCCCATTAGTCCCATAACACCTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTGGGCTACCTTCTCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGTAGGGAGGAAGCAATaGAGAAGGCCCGTGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLWATFSGESSLGWVGAFVGRKQ*RRPVGG Trigger: TCCGCCCACGGGCCTTCTCCATTGCTTCCTCCCTAC...AAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGAGAAGGTAGCCCAGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | TTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACTGAGCGTAGGGAGGAAGCAATaGAGAAGGCCCGTGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPIPNAQETWSLVAFQLSVGRKQ*RRPVGG Trigger: TCCGCCCACGGGCCTTCTCCATTGCTTCCTCCCTAC...GCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAATATTGATCCCAGCTCCTCTGGGCTACCTTCTCTGGTGAGAGTAGCTACCAGGTGCCTAGGCTaGGAGGGCAGGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGNIDPSSSGLPSLVRVATRCLG*EGRAGR Trigger: CCTTCCTGCCCTGCCCTCCCAGCCTAGGCACCTGGT...AGCTACTCTCACCAGAGAAGGTAGCCCAGAGGAGCTGGGATCAATATTGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| CDS-3UTR TCA 90 bp | TCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGAAGGCTGGCTTGTGCAGTGTAGCCTCCTGGGATaGGCCAGTAGGGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGESSLGWVGAFEGWLVQCSLLG*ASREEA Trigger: TGCTTCCTCCCTACTGGCTCATCCCAGGAGGCTACA...CTGCACAAGCCAGCCTTCAAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTACGCAAGGACTGGGCAAGGGGACTCCATaGGGAATCTCAGGAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPTYGTLGSTEFGCTQGLGKGTP*GISGMS Trigger: TGACATTCCTGAGATTCCTCATGGAGTCCCCTTGCC...CAGTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114349.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTACGCAAGGACGTCAGCCAGCCCTTCTaGTCTAGCTTCTGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLRMGHWVPLSLAVRKDVSQPF*SSFCHS Trigger: TGAATGGCAGAAGCTAGAGCAGAAGGGCTGGCTGAC...GTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGCCTCCAGTTCCGGTTTACTGTCTGGAGTTCTGGCACCCAGAGGGGCCCTGGTCTCCTTGGCCTGTaGTCGCACAAACAAATATCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLQFRFTVWSSGTQRGPGLLGL*SHKQIS Trigger: TGATATTTGTTTGTGCGACCACAGGCCAAGGAGACC...AGGGCCCCTCTGGGTGCCAGAACTCCAGACAGTAAACCGGAACTGGAGGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR CCA 90 bp | TTGGAATCACACATTTGTGTCCACTCTCACCAGCTGGACTACGAGCTGGCGGTAGGGCCAGTGACCCTCTaGTTGGTGATCACAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LESHICVHSHQLDYELAVGPVTL*LVITGA Trigger: GGCACCTGTGATCACCAACCAGAGGGTCACTGGCCC...TACCGCCAGCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTGATTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAATCACACATTTGTGTCCACTCTCACCAGCTGGACTACGAGCTGGCGGTACAGAACTGCTGGGTGTaGGCCTCCGAGTTAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LESHICVHSHQLDYELAVQNCWV*ASELEG Trigger: GCCCTCTAACTCGGAGGCCCACACCCAGCAGTTCTG...TACCGCCAGCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTGATTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGACAGATTTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGACTTGGCAGAACTGCTaGGTGTGGGCCTCCGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ADRQICPFPMLRRLGPWWTWQNC*VWASEL Trigger: TAACTCGGAGGCCCACACCCAGCAGTTCTGCCAAGT...CCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTCCTCCTGGAACTCGCTCTGTAGACCAGGCTGGCCTGGAACTCAGAAAGCTCTTCCTGACCTCTaGCAGAGCTCAATTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLSSWNSLCRPGWPGTQKALPDL*QSSIPA Trigger: TGCTGGAATTGAGCTCTGCCAGAGGTCAGGAAGAGC...TTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGCGAGTTCCAGGAGGACAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGATGTGTCTGGTGTTTTTaGGAACACGAGGCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAAVAFRTHTSFCLVQVRCVWCF*EHEAPR Trigger: CCTGGGAGCCTCGTGTTCCCAAAAACACCAGACACA...TCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTCTCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGAAGGCTGGCCATCTGCTGGTAGCTaGCACAGTGGGTCCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATFSGESSLGWVGAFEGWPSAGS*HSGSKS Trigger: GCTCTTGGACCCACTGTGCCAGCTACCAGCAGATGG...CCAGCCTTCAAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGAGAAGGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| 3UTR CAA 72 bp | GCTCAATTCCAGCAGCTTCTCTCGCTCCAGCGCATGTaGGGAGAGACAAGCCAGGAGCTCAAAGAAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: AQFQQLLSLQRM*GETSQELKEGT Trigger: CGTTCCTTCTTTGAGCTCCTGGCTTGTCTCTCCCAACATGCGCTGGAGCGAGAGAAGCTGCTGGAATTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| 3UTR CAA 72 bp | AGGTCACACTGCTTTGGAGCTCCAGTACTCACCAGTTaGGCCATGAGCCACTCGTTCCTGAATGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSHCFGAPVLTS*AMSHSFLNGCS Trigger: CGAGCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGTGAGTACTGGAGCTCCAAAGCAGTGTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| CDS-3UTR CCA 90 bp | TTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACTGAGCTCCAGGCACAACACTTaGCAGAACTGCTGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPIPNAQETWSLVAFQLSSRHNT*QNCWVW Trigger: CCACACCCAGCAGTTCTGCCAAGTGTTGTGCCTGGA...GCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGACAGATTTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGGCTCTTCCTGACCTCTaGCAGAGCTCAATTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADRQICPFPMLRRLGPWWALPDL*QSSIPA Trigger: TGCTGGAATTGAGCTCTGCCAGAGGTCAGGAAGAGC...CCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGACAGATTTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGTGTGTCTGGTGTTTTTaGGAACACGAGGCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADRQICPFPMLRRLGPWWCVWCF*EHEAPR Trigger: CCTGGGAGCCTCGTGTTCCCAAAAACACCAGACACA...CCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAGCTGCACAGGTGTTATGGGACTAATGGGAATAGCACGGGGTCAGACGTGTGTCTGGTGTTTTTaGGAACACGAGGCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELSCTGVMGLMGIARGQTCVWCF*EHEAPR Trigger: CCTGGGAGCCTCGTGTTCCCAAAAACACCAGACACA...CGTCTGACCCCGTGCTATTCCCATTAGTCCCATAACACCTGTGCAGCTCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR TCA 90 bp | TTGGAATCACACATTTGTGTCCACTCTCACCAGCTGGACTACGAGCTGGCGGTATCCCAGAGCTCTTCCTaGCCTCTGGCAGAGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LESHICVHSHQLDYELAVSQSSS*PLAELN Trigger: ATTGAGCTCTGCCAGAGGTCAGGAAGAGCTCTGGGA...TACCGCCAGCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTGATTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR TCA 90 bp | GCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTAAGTCGTCCTTCTTCTTaGAAAATGGACATAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: APGLGLRMGHWVPLSLAVSRPSS*KMDIRA Trigger: AGCCCTTATGTCCATTTTTCAAGAAGAAGGACGACT...TACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR TCA 90 bp | GGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTACGCAAGGACTGGAAGAAACTGAAAGATaGACTTGGAGGGCAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPTYGTLGSTEFGCTQGLEETER*TWRARG Trigger: TCCCCTTGCCCTCCAAGTTCATCTTTCAGTTTCTTC...CAGTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | GCTACCTTCTCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGAAGGCTGGGCTCTTCCTGACCTCTaGCAGAGCTCAATTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATFSGESSLGWVGAFEGWALPDL*QSSIPA Trigger: TGCTGGAATTGAGCTCTGCCAGAGGTCAGGAAGAGC...CCAGCCTTCAAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGAGAAGGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | CAAAACAAAGGCAATATTGATCCCAGCTCCTCTGGGCTACCTTCTCTGGTGAGACCACTCGTTCCTGAATaGCTGCTCGGAAGGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNKGNIDPSSSGLPSLVRPLVPE*LLGRGP Trigger: TGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGG...TCTCACCAGAGAAGGTAGCCCAGAGGAGCTGGGATCAATATTGCCTTTGTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| 3UTR CAA 72 bp | CACAGCTCTATGTCCTTTGGAGGGCTTAGCAGGCCCTaGGTGGTAGGGACTATAAATGCAGATTTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSMSFGGLSRP*VVGTINADLGQ Trigger: CTGCCCCAAATCTGCATTTATAGTCCCTACCACCAAGGGCCTGCTAAGCCCTCCAAAGGACATAGAGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR CAA 72 bp | ACAGACAGATTTGCCCATTCCCAATGCTCAGGAGACTaGGTCCCTGGTGGCTTTTCAACTGAGCTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDRFAHSQCSGD*VPGGFSTELSC Trigger: GCAGCTCAGCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR CAA 72 bp | CCTCTCTGCTTGGCCATGAGAGAAGGGTATATGAGCTaGGCTGAGTTGTGTGGCCATCAGAGAAGGGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: PLCLAMREGYMS*AELCGHQRRGL Trigger: TAGTCCCCTTCTCTGATGGCCACACAACTCAGCCAAGCTCATATACCCTTCTCTCATGGCCAAGCAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR CAA 72 bp | CAGAGTCAACTAGGAACAGAGCTAGACCTTGGGCATTaGGAGGCTTCAGGGTCTGGATGGGCCCTTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSQLGTELDLGH*EASGSGWALAK Trigger: TTTTGCAAGGGCCCATCCAGACCCTGAAGCCTCCAAATGCCCAAGGTCTAGCTCTGTTCCTAGTTGACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR CAA 72 bp | CCTCCAGAAGTTCTTCATGTTGTCAGGAGGGTCTCCTaGGCCTGTGGTCGCACAAACAAATATCACCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPEVLHVVRRVS*ACGRTNKYHQG Trigger: CCCCTGGTGATATTTGTTTGTGCGACCACAGGCCAAGGAGACCCTCCTGACAACATGAAGAACTTCTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132128.3 |
||
| 3UTR CAA 72 bp | AAGTGTGAAAAACTGATTGGGGTCCAGGCACAACACTaGGCAGAACTGCTGGGTGTGGGCCTCCGAGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCEKLIGVQAQH*AELLGVGLRVR Trigger: TCTAACTCGGAGGCCCACACCCAGCAGTTCTGCCAAGTGTTGTGCCTGGACCCCAATCAGTTTTTCACACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTGAGCTGCACAGGTGTTATGGGACTAATGGGAATAGCACGGGGTCAGACGGGCTCTTCCGGAATATaGACCTCCAGAAGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELSCTGVMGLMGIARGQTGSSGI*TSRSSS Trigger: TGAAGAACTTCTGGAGGTTCATATTCCGGAAGAGCC...CGTCTGACCCCGTGCTATTCCCATTAGTCCCATAACACCTGTGCAGCTCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR TCA 90 bp | CACACATTTGTGTCCACTCTCACCAGCTGGACTACGAGCTGGCGGTATAGCCCAGGCTCTTCCGGAATATaGACCTCCAGAAGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTFVSTLTSWTTSWRYSPGSSGI*TSRSSS Trigger: TGAAGAACTTCTGGAGGTTCATATTCCGGAAGAGCC...TGGGCTATACCGCCAGCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR GCA 90 bp | CAAAACAAAGGCAATATTGATCCCAGCTCCTCTGGGCTACCTTCTCTGGTGAGACGGACAGGTCCTGCTTaGCCAGGATTCAGGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNKGNIDPSSSGLPSLVRRTGPA*PGFRDA Trigger: AGCATCCCTGAATCCTGGGCAAGCAGGACCTGTCCG...TCTCACCAGAGAAGGTAGCCCAGAGGAGCTGGGATCAATATTGCCTTTGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GACCGCCCATGGCAAGCACATAGGGTTCTTTTCACAACTCTTTCTGCCAGGCCAGCAATGTCCAAGTACTaGGACACGAGGTTCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: DRPWQAHRVLFTTLSARPAMSKY*DTRFHT Trigger: TGTGTGGAACCTCGTGTCCCAGTACTTGGACATTGC...TGGCCTGGCAGAAAGAGTTGTGAAAAGAACCCTATGTGCTTGCCATGGGCGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | CAAAACAAAGGCAATATTGATCCCAGCTCCTCTGGGCTACCTTCTCTGGTGAGACTTCTGACGACACAGTaGACAGCACACACGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNKGNIDPSSSGLPSLVRLLTTQ*TAHTAQ Trigger: CTGGGCCGTGTGTGCTGTCCACTGTGTCGTCAGAAG...TCTCACCAGAGAAGGTAGCCCAGAGGAGCTGGGATCAATATTGCCTTTGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228627.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCCAAGCGTGCATGCACACAGTACAGGGCTaGGGCAGCCCTGGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGIGDNKSLLITRIQACMHTVQG*GSPGGS Trigger: TGACCCACCAGGGCTGCCTCAGCCCTGTACTGTGTG...CATGCACGCTTGGATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCCAAGCGTGCATGGGCCAAGGGCCAGGATaGAGGGCTGTGACGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGIGDNKSLLITRIQACMGQGPG*RAVTDA Trigger: TGCATCCGTCACAGCCCTGCATCCTGGCCCTTGGCC...CATGCACGCTTGGATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAGCTGCACAGGTGTTATGGGACTAATGGGAATAGCACGGGGTCAGACGGATAATGGGTGTGTCTaGTGTTTTTGGGAACACGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELSCTGVMGLMGIARGQTDNGCV*CFWEHE Trigger: CTCGTGTTCCCAAAAACACCAGACACACCCATTATC...CGTCTGACCCCGTGCTATTCCCATTAGTCCCATAACACCTGTGCAGCTCAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGTGTTATGGGACTAATGGGAATAGCACGGGGTCAGACGGGCAGTGCAGATAATGGGTGTGTCTaGTGTTTTTGGGAACACGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTGVMGLMGIARGQTGSADNGCV*CFWEHE Trigger: CTCGTGTTCCCAAAAACACCAGACACACCCATTATC...TGCACTGCCCGTCTGACCCCGTGCTATTCCCATTAGTCCCATAACACCTGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| 3UTR CAA 72 bp | TTGGCCATGAGAGAAGGGTATATGAGCTTGGCTGAGTaGTGTGGCCATCAGAGAAGGGGACTAGCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LAMREGYMSLAE*CGHQRRGLAWL Trigger: TAGCCAAGCTAGTCCCCTTCTCTGATGGCCACACAACTCAGCCAAGCTCATATACCCTTCTCTCATGGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| 3UTR CAA 72 bp | CAGCTTCTGTCTGGTGCAGGTGAGAGTCTGCAGCCCTaGCCTTCTCCAATGAACAGATCTCAGGATAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSGAGESLQP*PSPMNRSQDKQ Trigger: CTGTTTATCCTGAGATCTGTTCATTGGAGAAGGCAAGGGCTGCAGACTCTCACCTGCACCAGACAGAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 ENSMUST00000228627.3 |
||
| 3UTR CAA 72 bp | CTGCCTCCTAGCTGCAGCAGCCTACGATGTAGCTTCTaGGCCACAAAGTTGAACTTGGCATATGAGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LPPSCSSLRCSF*ATKLNLAYEES Trigger: GGATTCCTCATATGCCAAGTTCAACTTTGTGGCCAAGAAGCTACATCGTAGGCTGCTGCAGCTAGGAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGAAGGCTGGCTTGTGCAGGAAGAAACTGAAAGATaGACTTGGAGGGCAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGESSLGWVGAFEGWLVQEETER*TWRASW Trigger: CCAACTTGCCCTCCAAGTTCATCTTTCAGTTTCTTC...CTGCACAAGCCAGCCTTCAAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR TCA 90 bp | GCAGACAGACAGATTTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGTCTTGGCCACAAAGTTaGACTTGGCATATGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ADRQICPFPMLRRLGPWWSWPQS*TWHMRN Trigger: ATTCCTCATATGCCAAGTTCAACTTTGTGGCCAAGA...CCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114349.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACAAAGGCAATATTGATCCCAGCTCCTCTGGGCTACCTTCTCTGGTGAGAGTCAGCCAGCCCTTCTaGTCTAGCTTCTGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNKGNIDPSSSGLPSLVRVSQPF*SSFCHS Trigger: TGAATGGCAGAAGCTAGAGCAGAAGGGCTGGCTGAC...TCTCACCAGAGAAGGTAGCCCAGAGGAGCTGGGATCAATATTGCCTTTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGGTCTGGTCCCTGTTTTCCACAAGCTGACAGACAGAACCGAGGTTCCTTAGCAATGTCCAAGTACTaGGACACGAGGTTCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: CWSGPCFPQADRQNRGSLAMSKY*DTRFHT Trigger: TGTGTGGAACCTCGTGTCCCAGTACTTGGACATTGC...TAAGGAACCTCGGTTCTGTCTGTCAGCTTGTGGAAAACAGGGACCAGACCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR CCA 90 bp | CTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCCAAGCGTGCATGGGCCCCAGCTCATGCTaGTCATCACCCAGACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGIGDNKSLLITRIQACMGPSSC*SSPRHG Trigger: CCCATGTCTGGGTGATGACCAGCATGAGCTGGGGCC...CATGCACGCTTGGATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTCTGGGCTACCTTCTCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTAGTCGTCCTTCTTCTTaGAAAATGGACATAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWATFSGESSLGWVGAFSRPSS*KMDIRA Trigger: AGCCCTTATGTCCATTTTTCAAGAAGAAGGACGACT...AAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGAGAAGGTAGCCCAGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTCACAACTCTTTCTGCCAGGCCAAGCTCCTTCAGAGGCTGTCCTTGTGGAAGAAACTGAAAGATaGACTTGGAGGGCAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFSQLFLPGQAPSEAVLVEETER*TWRARG Trigger: TCCCCTTGCCCTCCAAGTTCATCTTTCAGTTTCTTC...CACAAGGACAGCCTCTGAAGGAGCTTGGCCTGGCAGAAAGAGTTGTGAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTGTCACCAATGAGCCATGAAGTGAGCTTAGATTTGTCTGCATCTCCCAAGTCCAGGCACAACACTTaGCAGAACTGCTGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVSPMSHEVSLDLSASPKSRHNT*QNCWVW Trigger: CCACACCCAGCAGTTCTGCCAAGTGTTGTGCCTGGA...CTTGGGAGATGCAGACAAATCTAAGCTCACTTCATGGCTCATTGGTGACACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| 3UTR CAA 72 bp | GGCAGATGCATCTGCAGTGGAGAGTCGTCCTTCTTCTaGAAAAATGGACATAAGGGCTTCCGAAACATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRCICSGESSFF*KNGHKGFRNIR Trigger: ACGGATGTTTCGGAAGCCCTTATGTCCATTTTTCAAGAAGAAGGACGACTCTCCACTGCAGATGCATCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| CDS-3UTR CCA 90 bp | GGCATGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCGGGCCAGTGACCCTCTaGTTGGTGATCACAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GMYSLGIGDNKSLLITRIGPVTL*LVITGA Trigger: GGCACCTGTGATCACCAACCAGAGGGTCACTGGCCC...GATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR TCA 90 bp | GGCATGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCTGTAGCCTCCTGGGATaGGCCAGTAGGGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GMYSLGIGDNKSLLITRICSLLG*ASREEA Trigger: TGCTTCCTCCCTACTGGCTCATCCCAGGAGGCTACA...GATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| 3UTR CAA 72 bp | GACTTCCAAATAAATAGCTCTCTAAGCCCTCTCTGCTaGGCCATGAGAGAAGGGTATATGAGCTTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DFQINSSLSPLC*AMREGYMSLAE Trigger: CTCAGCCAAGCTCATATACCCTTCTCTCATGGCCAAGCAGAGAGGGCTTAGAGAGCTATTTATTTGGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR CCA 90 bp | GGCATGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCACTTGGCAGAACTGCTaGGTGTGGGCCTCCGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GMYSLGIGDNKSLLITRITWQNC*VWASEL Trigger: TAACTCGGAGGCCCACACCCAGCAGTTCTGCCAAGT...GATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CCA 90 bp | GGCATGTATAGTCTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCGATAATGGGTGTGTCTaGTGTTTTTGGGAACACGAG | + |
|
Preference number: 4 (lower is better) Translates to: GMYSLGIGDNKSLLITRIDNGCV*CFWEHE Trigger: CTCGTGTTCCCAAAAACACCAGACACACCCATTATC...GATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAGACTATACATGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTTATATAGGACTCAGCCTGAAATGTTACACCTTACATTGTGTCACCAATCTTGGCCACAAAGTTaGACTTGGCATATGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLLYRTQPEMLHLTLCHQSWPQS*TWHMRN Trigger: ATTCCTCATATGCCAAGTTCAACTTTGTGGCCAAGA...TTGGTGACACAATGTAAGGTGTAACATTTCAGGCTGAGTCCTATATAACAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| 3UTR CAA 72 bp | AAAATGAATACAACATCACCAGCAGCAAAGCTGATATaGGAGTCTGTAATGTCAAATTCAATCAGCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KMNTTSPAAKLI*ESVMSNSISRT Trigger: TGTTCGGCTGATTGAATTTGACATTACAGACTCCAATATCAGCTTTGCTGCTGGTGATGTTGTATTCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| CDS CCA 90 bp | AGCCGCCGGCGCCGGGCCTCACGGCCCAGCCTCTCCGCCTCGTCCTaGGCTGTACCAGTCTGGCTGCCGAAAAGCACCAGGAGCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRRRRASRPSLSASS*AVPVWLPKSTRSCG Trigger: TCCACAGCTCCTGGTGCTTTTCGGCAGCCAGACTGGTACAGCCCAGGACGAGGCGGAGAGGCTGGGCCGTGAGGCCCGGCGCCGGCGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000132128.3 ENSMUST00000141808.8 ENSMUST00000147866.2 ENSMUST00000148589.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGGCTTGTGCAGTGCAGGCCTCTCCTGGTAGTTACTGTGGCTGCTGCTGTTCCGGACAGGTCCTGCTaGCCCAGGATTCAGGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: GWLVQCRPLLVVTVAAAVPDRSC*PRIQGC Trigger: GCATCCCTGAATCCTGGGCAAGCAGGACCTGTCCGG...AACAGCAGCAGCCACAGTAACTACCAGGAGAGGCCTGCACTGCACAAGCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTAGCTGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTGCTGAGCTGGCTATGTaGAGCTCCTCAGCCCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: VLAAPGLGLRMGHWVPLSAELAM*SSSAPM Trigger: CATAGGGGCTGAGGAGCTCAACATAGCCAGCTCAGC...ACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCAGCTAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CAA 90 bp | GGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTACGCAAGGACTGCCGGACAGGTCCTGCTaGCCCAGGATTCAGGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: GPTYGTLGSTEFGCTQGLPDRSC*PRIQGC Trigger: GCATCCCTGAATCCTGGGCAAGCAGGACCTGTCCGG...CAGTCCTTGCGTACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CAA 90 bp | TGGCTGTCCTCCTGGAACTCGCTCTGTAGACCAGGCTGGCCTGGAACTCAGAAACCTGCTCTTCCACAGTaGACTCCAGGGCCCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WLSSWNSLCRPGWPGTQKPALPQ*TPGPWQ Trigger: CTGCCAGGGCCCTGGAGTCAACTGTGGAAGAGCAGG...TTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGCGAGTTCCAGGAGGACAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS GCA 90 bp | ACTAGAACAGAGGTCAGGATGCGTAGACGGAGACTCCAGGATGACTaGTCCCGGGAGAAGGCTGTAACCAGGGTCAGCCAGCCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRTEVRMRRRRLQDD*SREKAVTRVSQPFC Trigger: GCAGAAGGGCTGGCTGACCCTGGTTACAGCCTTCTCCCGGGAGCAGTCATCCTGGAGTCTCCGTCTACGCATCCTGACCTCTGTTCTAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS TCA 90 bp | ATCTCCCACTCTAGCATAGGTGTCTTCTTCCTGCTCTTCCACAGTTaGCTCCAGGGCCCTGGCAGCGGATGGGTCTCTGGCCTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISHSSIGVFFLLFHS*LQGPGSGWVSGLQF Trigger: GAACTGGAGGCCAGAGACCCATCCGCTGCCAGGGCCCTGGAGTCAACTGTGGAAGAGCAGGAAGAAGACACCTATGCTAGAGTGGGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS CCA 90 bp | CATAGGTGTCTTCTTCCTGCTCTTCCACAGTTGACTCCAGGGCCCTaGCAGCGGATGGGTCTCTGGCCTCCAGTTCCGGTTTACTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRCLLPALPQLTPGP*QRMGLWPPVPVYCL Trigger: CAGACAGTAAACCGGAACTGGAGGCCAGAGACCCATCCGCTGCCAGGGCCCTGGAGTCAACTGTGGAAGAGCAGGAAGAAGACACCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS-3UTR CAA 90 bp | TGCACCGGGGCTGGGCCTACGTATGGGACACTGGGTTCCACTGAGTTTGGCTGTAACTTGGAGGGCAAGTaGGCATATGAGGAATCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CTGAGPTYGTLGSTEFGCNLEGK*AYEESP Trigger: CGGGGATTCCTCATATGCCAACTTGCCCTCCAAGTT...ACAGCCAAACTCAGTGGAACCCAGTGTCCCATACGTAGGCCCAGCCCCGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGCTGTTGCCTTCAGGACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCCAGGCACAACACTaGGCAGAACTGCTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AAAVAFRTHTSFCLVQVRVQAQH*AELLGV Trigger: CACACCCAGCAGTTCTGCCAAGTGTTGTGCCTGGAC...TCTCACCTGCACCAGACAGAAGCTGGTGTGTGTCCTGAAGGCAACAGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCCACCATGATAATGGGTGTGTCTGGTGTTTTTGGGAACACGAGGCTCAGGTCTCTGGCAGCCTaGATCAGTGCCCTCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PAPTMIMGVSGVFGNTRLRSLAA*ISALPA Trigger: TGCAGGGAGGGCACTGATCAAGGCTGCCAGAGACCT...GAGCCTCGTGTTCCCAAAAACACCAGACACACCCATTATCATGGTGGGGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| CDS GCA 90 bp | GGACAAGACACAAGTAGATGTAAGGTCTCTGGCAGCCTTGATCAGTaGCCTCCCTGCACCGCATCCCACCACCACCTTCACCACGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GQDTSRCKVSGSLDQ*PPCTASHHHLHHGV Trigger: TACTCCGTGGTGAAGGTGGTGGTGGGATGCGGTGCAGGGAGGGCACTGATCAAGGCTGCCAGAGACCTTACATCTACTTGTGTCTTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| CDS TCA 90 bp | ATTGGGCGCTGGGGTCCATCAGCTCGAAGCAGTTCCTCCTGCAGCTaGCAGATCTCCCACTCTAGCATAGGTGTCTTCTTCCTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IGRWGPSARSSSSCS*QISHSSIGVFFLLF Trigger: GAAGAGCAGGAAGAAGACACCTATGCTAGAGTGGGAGATCTGTCAGCTGCAGGAGGAACTGCTTCGAGCTGATGGACCCCAGCGCCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS GCA 90 bp | ACAAGTAGATGTAAGGTCTCTGGCAGCCTTGATCAGTGCCCTCCCTaGACCGCATCCCACCACCACCTTCACCACGGAGTAAGAGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TSRCKVSGSLDQCPP*TASHHHLHHGVRVQ Trigger: TTGGACTCTTACTCCGTGGTGAAGGTGGTGGTGGGATGCGGTGCAGGGAGGGCACTGATCAAGGCTGCCAGAGACCTTACATCTACTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148589.9 |
||
| CDS GCA 90 bp | GGACAAGACACAAGTAGATGTAAGGTCTCTGGCAGCCTTGATCAGTaGCCTCCCTGCACCGCATCCCACCACCACCTTCACTCAAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: GQDTSRCKVSGSLDQ*PPCTASHHHLHSNV Trigger: GACGTTTGAGTGAAGGTGGTGGTGGGATGCGGTGCAGGGAGGGCACTGATCAAGGCTGCCAGAGACCTTACATCTACTTGTGTCTTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147866.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTCTGGGCTACCTTCTCTGGTGAGAGTAGCTTAGGTTGGGTGGGAGCTTTTGCTGAGCTGGCTATGTaGAGCTCCTCAGCCCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: LLWATFSGESSLGWVGAFAELAM*SSSAPM Trigger: CATAGGGGCTGAGGAGCTCAACATAGCCAGCTCAGC...AAAAGCTCCCACCCAACCTAAGCTACTCTCACCAGAGAAGGTAGCCCAGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACTGAGCGTCCAGGCACAACACTaGGCAGAACTGCTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPIPNAQETWSLVAFQLSVQAQH*AELLGV Trigger: CACACCCAGCAGTTCTGCCAAGTGTTGTGCCTGGAC...GCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CAA 90 bp | TTGCCCATTCCCAATGCTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACTGAGCGTAGAAGTAGGCACCTaGGCCATCCAGCAGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPIPNAQETWSLVAFQLSVEVGT*AIQQLP Trigger: TGGGAGCTGCTGGATGGCCAAGGTGCCTACTTCTAC...GCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGAATGGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CAA 90 bp | CAAAACAAAGGCAATATTGATCCCAGCTCCTCTGGGCTACCTTCTCTGGTGAGACCGGACAGGTCCTGCTaGCCCAGGATTCAGGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: QNKGNIDPSSSGLPSLVRPDRSC*PRIQGC Trigger: GCATCCCTGAATCCTGGGCAAGCAGGACCTGTCCGG...TCTCACCAGAGAAGGTAGCCCAGAGGAGCTGGGATCAATATTGCCTTTGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAATCACACATTTGTGTCCACTCTCACCAGCTGGACTACGAGCTGGCGGTAGTAGAAGTAGGCACCTaGGCCATCCAGCAGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LESHICVHSHQLDYELAVVEVGT*AIQQLP Trigger: TGGGAGCTGCTGGATGGCCAAGGTGCCTACTTCTAC...TACCGCCAGCTCGTAGTCCAGCTGGTGAGAGTGGACACAAATGTGTGATTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR CAA 90 bp | GAGCTGAGCTGCACAGGTGTTATGGGACTAATGGGAATAGCACGGGGTCAGACGCAAGAAGTTTCCAGTTaGGCCATGAGCCACTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELSCTGVMGLMGIARGQTQEVSS*AMSHSF Trigger: GAACGAGTGGCTCATGGCCAAACTGGAAACTTCTTG...CGTCTGACCCCGTGCTATTCCCATTAGTCCCATAACACCTGTGCAGCTCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS-3UTR CAA 90 bp | GAGGTCAGGATGCGTAGACGGAGACTCCAGGATGACTGCAGGGATTGTTGTAGACAAGAAGTTTCCAGTTaGGCCATGAGCCACTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVRMRRRRLQDDCRDCCRQEVSS*AMSHSF Trigger: GAACGAGTGGCTCATGGCCAAACTGGAAACTTCTTG...TCTACAACAATCCCTGCAGTCATCCTGGAGTCTCCGTCTACGCATCCTGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS-3UTR CAA 90 bp | GACACACACCAGCTTCTGTCTGGTGCAGGTGAGAGTCTGCAGCCCTTGCCTTCTCTACGATGTAGCTTCTaGGCCACAAAGTTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: DTHQLLSGAGESLQPLPSLRCSF*ATKLNL Trigger: CAAGTTCAACTTTGTGGCCAAGAAGCTACATCGTAG...AGAAGGCAAGGGCTGCAGACTCTCACCTGCACCAGACAGAAGCTGGTGTGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAATGCTCAGGAGACTTGGTCCCTGGTGGCTTTTCAACTGAGCTGAGCTGCCTACGATGTAGCTTCTaGGCCACAAAGTTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQCSGDLVPGGFSTELSCLRCSF*ATKLNL Trigger: CAAGTTCAACTTTGTGGCCAAGAAGCTACATCGTAG...GCAGCTCAGCTCAGTTGAAAAGCCACCAGGGACCAAGTCTCCTGAGCATTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114349.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCCAAGCGTGCATGCCAGTGACCCTCTGGTaGGTGATCACAGGTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGIGDNKSLLITRIQACMPVTLW*VITGAR Trigger: CCTGGCACCTGTGATCACCAACCAGAGGGTCACTGG...CATGCACGCTTGGATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS CCA 90 bp | AATATGAACCTCCAGAAGTTCTTCATGTTGTCAGGAGGGTCTCCTTaGCCTGTGGTCGCACAAACAAATATCACCAGGGGCTCCCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: NMNLQKFFMLSGGSP*PVVAQTNITRGSLM Trigger: CATTAGGGAGCCCCTGGTGATATTTGTTTGTGCGACCACAGGCCAAGGAGACCCTCCTGACAACATGAAGAACTTCTGGAGGTTCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000141808.8 ENSMUST00000147866.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCCAAGCGTGCATGGCTGAGCTGGCTATGTaGAGCTCCTCAGCCCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: LGIGDNKSLLITRIQACMAELAM*SSSAPM Trigger: CATAGGGGCTGAGGAGCTCAACATAGCCAGCTCAGC...CATGCACGCTTGGATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTATTGGTGATAACAAGTCTTTGCTGATTACCAGAATCCAAGCGTGCATGGTCCAGGCACAACACTaGGCAGAACTGCTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGIGDNKSLLITRIQACMVQAQH*AELLGV Trigger: CACACCCAGCAGTTCTGCCAAGTGTTGTGCCTGGAC...CATGCACGCTTGGATTCTGGTAATCAGCAAAGACTTGTTATCACCAATACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS-3UTR CAA 90 bp | ATTGTGTCACCAATGAGCCATGAAGTGAGCTTAGATTTGTCTGCATCTCCCAAGCAAGAAGTTTCCAGTTaGGCCATGAGCCACTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVSPMSHEVSLDLSASPKQEVSS*AMSHSF Trigger: GAACGAGTGGCTCATGGCCAAACTGGAAACTTCTTG...CTTGGGAGATGCAGACAAATCTAAGCTCACTTCATGGCTCATTGGTGACACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000228052.2 |
||
| CDS CCA 72 bp | CGCCGGGCCTCACGGCCCAGCCTCTCCGCCTCGTCCTaGGCTGTACCAGTCTGGCTGCCGAAAAGCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRASRPSLSASS*AVPVWLPKSTR Trigger: CCTGGTGCTTTTCGGCAGCCAGACTGGTACAGCCCAGGACGAGGCGGAGAGGCTGGGCCGTGAGGCCCGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000132128.3 ENSMUST00000141808.8 ENSMUST00000147866.2 ENSMUST00000148589.9 |
||
| CDS CCA 72 bp | CCCAGCCTCTCCGCCTCGTCCTGGGCTGTACCAGTCTaGCTGCCGAAAAGCACCAGGAGCTGTGGAACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSLSASSWAVPV*LPKSTRSCGTC Trigger: GCAGGTTCCACAGCTCCTGGTGCTTTTCGGCAGCCAGACTGGTACAGCCCAGGACGAGGCGGAGAGGCTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000132128.3 ENSMUST00000147866.2 ENSMUST00000148589.9 |
||
| CDS GCA 72 bp | TCCAGTTTGGCCATGAGCCACTCGTTCCTGAATGGCTaGTCGGAAGGGGGCCACACCAGTTCCAGCCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSLAMSHSFLNG*SEGGHTSSSPH Trigger: GTGGGGGCTGGAACTGGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000228052.2 |
||
| CDS GCA 72 bp | AGCTCCCAGACAAGTGGCCCCAGCTCTCGAAGCCGGTaGTGCACATATACCTTCTGCTCCTGCTCCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSQTSGPSSRSR*CTYTFCSCSRE Trigger: CTCCCGGGAGCAGGAGCAGAAGGTATATGTGCAGCACCGGCTTCGAGAGCTGGGGCCACTTGTCTGGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS GCA 72 bp | CCCAGCTCTCGAAGCCGGTGCTGCACATATACCTTCTaGTCCTGCTCCCGGGAGAAGGCTGTAACCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSRSRCCTYTF*SCSREKAVTRV Trigger: GACCCTGGTTACAGCCTTCTCCCGGGAGCAGGAGCAGAAGGTATATGTGCAGCACCGGCTTCGAGAGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS GCA 72 bp | TCCCAGACAAGTGGCCCCAGCTCTCGAAGCCGGTGCTaGACATATACCTTCTGCTCCTGCTCCCGGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SQTSGPSSRSRC*TYTFCSCSREK Trigger: CTTCTCCCGGGAGCAGGAGCAGAAGGTATATGTGCAGCACCGGCTTCGAGAGCTGGGGCCACTTGTCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 |
||
| CDS CCA 72 bp | AGTTTCCAGTTTGGCCATGAGCCACTCGTTCCTGAATaGCTGCTCGGAAGGGGGCCACACCAGTTCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SFQFGHEPLVPE*LLGRGPHQFQP Trigger: GGGCTGGAACTGGTGTGGCCCCCTTCCGAGCAGCCATTCAGGAACGAGTGGCTCATGGCCAAACTGGAAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000228052.2 |
||
| CDS CAA 90 bp | CGCCTCGAGGACAAGACACAAGTAGATGTAAGGTCTCTGGCAGCCTaGATCAGTGCCCTCCCTGCACCGCATCCCACCACCACCTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: RLEDKTQVDVRSLAA*ISALPAPHPTTTFT Trigger: AGTGAAGGTGGTGGTGGGATGCGGTGCAGGGAGGGCACTGATCAAGGCTGCCAGAGACCTTACATCTACTTGTGTCTTGTCCTCGAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147866.2 |
||
| CDS GCA 72 bp | TGTAAGGTCTCTGGCAGCCTTGATCAGTGCCCTCCCTaGACCGCATCCCACCACCACCTTCACTCAAACGTC | + |
|
Preference number: 6 (lower is better) Translates to: CKVSGSLDQCPP*TASHHHLHSNV Trigger: GACGTTTGAGTGAAGGTGGTGGTGGGATGCGGTGCAGGGAGGGCACTGATCAAGGCTGCCAGAGACCTTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147866.2 |
||
| CDS GCA 72 bp | ACAAGTAGATGTAAGGTCTCTGGCAGCCTTGATCAGTaGCCTCCCTGCACCGCATCCCACCACCACCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TSRCKVSGSLDQ*PPCTASHHHLH Trigger: GTGAAGGTGGTGGTGGGATGCGGTGCAGGGAGGGCACTGATCAAGGCTGCCAGAGACCTTACATCTACTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147866.2 ENSMUST00000148589.9 |
||
| CDS CAA 72 bp | GACAAGACACAAGTAGATGTAAGGTCTCTGGCAGCCTaGATCAGTGCCCTCCCTGCACCGCATCCCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: DKTQVDVRSLAA*ISALPAPHPTT Trigger: GGTGGTGGGATGCGGTGCAGGGAGGGCACTGATCAAGGCTGCCAGAGACCTTACATCTACTTGTGTCTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147866.2 ENSMUST00000148589.9 |
||
| CDS TCA 72 bp | TGGGGTCCATCAGCTCGAAGCAGTTCCTCCTGCAGCTaGCAGATCTCCCACTCTAGCATAGGTGTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WGPSARSSSSCS*QISHSSIGVFF Trigger: GAAGAAGACACCTATGCTAGAGTGGGAGATCTGTCAGCTGCAGGAGGAACTGCTTCGAGCTGATGGACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228052.2 |
||
| CDS TCA 72 bp | CCCCTATGCTGGGGACCTCCTGAAGAAACTGAAAGATaGACTTGGAGGGCAAGTTGGCATATGAGGAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: PLCWGPPEETER*TWRASWHMRNP Trigger: GGGATTCCTCATATGCCAACTTGCCCTCCAAGTTCATCTTTCAGTTTCTTCAGGAGGTCCCCAGCATAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100329.10 |
||
| CDS CCA 72 bp | TTATCTTCTCCCAAAGATCTCCTACCCAGGGGTCAATaGCAGCATCAGGCTTGGCATATGAGGAATCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LSSPKDLLPRGQ*QHQAWHMRNPR Trigger: TCGGGGATTCCTCATATGCCAAGCCTGATGCTGCCATTGACCCCTGGGTAGGAGATCTTTGGGAGAAGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141808.8 |
||
| CDS CAA 90 bp | GAATATGAACCTCCAGAAGTTCTTCATGTTGTCAGGAGGGTCTCCTaGGCCTGTGGTCGCACAAACAAATATCACCAGGGGCTCCCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: EYEPPEVLHVVRRVS*ACGRTNKYHQGLPN Trigger: ATTAGGGAGCCCCTGGTGATATTTGTTTGTGCGACCACAGGCCAAGGAGACCCTCCTGACAACATGAAGAACTTCTGGAGGTTCATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100329.10 ENSMUST00000114349.9 ENSMUST00000141808.8 ENSMUST00000147866.2 |
||