Pregenerated sensors for NDFIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053253Ensembl transcript IDs: ENSMUST00000138283.2, ENSMUST00000181969.8
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTCGTGTGTGGATTACTAGATGCATCTAAGAGGCAGAAAGTAAAGCACTGGACAGGAAGCGTCACGTGCTaGAAGGCTGCTCGTTACCCA | + |
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Preference number: 2 (lower is better) Translates to: FVCGLLDASKRQKVKHWTGSVTC*KAARYP Trigger: TGGGTAACGAGCAGCCTTCCAGCACGTGACGCTTCC...TGTCCAGTGCTTTACTTTCTGCCTCTTAGATGCATCTAGTAATCCACACACGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| 3UTR-3UTR TCA 90 bp | AACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGTAGACTCACTTTCTCAATTGTATCAGCACTaGGTAACCGAGCAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: NWRTPNLLFNWHLVDSLSQLYQH*VTEQDW Trigger: CCAGTCCTGCTCGGTTACTCAGTGCTGATACAATTG...AGAAAGTGAGTCTACCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAGATTCCAGTTGGAGTAATGGCCACACAAACTCACCACACACACTCCACCACTACATTTCCTTCTaGTCTCAGCAGTCTTCTATC | + |
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Preference number: 2 (lower is better) Translates to: KADSSWSNGHTNSPHTLHHYISF*SQQSSI Trigger: GATAGAAGACTGCTGAGAGCAGAAGGAAATGTAGTG...GTGGAGTGTGTGTGGTGAGTTTGTGTGGCCATTACTCCAACTGGAATCTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| 3UTR-3UTR TCA 90 bp | GATCTCAATTCAGGCTGTACGTTTTTACAAATTAGTCTTGGAATCACTAAACGACAATTGTATCAGCACTaGGTAACCGAGCAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: DLNSGCTFLQISLGITKRQLYQH*VTEQDW Trigger: CCAGTCCTGCTCGGTTACTCAGTGCTGATACAATTG...TCGTTTAGTGATTCCAAGACTAATTTGTAAAAACGTACAGCCTGAATTGAGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| 3UTR TCA 72 bp | CTGCTCGTTACCCAATTCCTCCAATTGTATCAGCACTaGGTAACCGAGCAGGACTGGGCTCTGCTGCTACAA | + |
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Preference number: 3 (lower is better) Translates to: LLVTQFLQLYQH*VTEQDWALLLQ Trigger: TTGTAGCAGCAGAGCCCAGTCCTGCTCGGTTACTCAGTGCTGATACAATTGGAGGAATTGGGTAACGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | CTGAACACCCCTGAAACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGAGCCGCGCGCGCTACTaGGCATGCTCGGCGCGGACG | + |
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Preference number: 4 (lower is better) Translates to: LNTPETGVPLTCSLTGIWSRARY*ACSART Trigger: CGTCCGCGCCGAGCATGCTCAGTAGCGCGCGCGGCT...CCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTTTCAGGGGTGTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | CTGAACACCCCTGAAACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGGTCCCCAGCTGGTGGTaGTCCATCCTGCCCGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: LNTPETGVPLTCSLTGIWVPSWW*SILPAS Trigger: CGAGGCGGGCAGGATGGATCACCACCAGCTGGGGAC...CCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTTTCAGGGGTGTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | AACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGTAGACTCACTTTCTGTCCCCAGCTGGTGGTaGTCCATCCTGCCCGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NWRTPNLLFNWHLVDSLSVPSWW*SILPAS Trigger: CGAGGCGGGCAGGATGGATCACCACCAGCTGGGGAC...AGAAAGTGAGTCTACCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR GCA 90 bp | CAAAGCTGTCGCTTTACAGATGATGTGGACGGTTCACATTGGTGTAAGAAAGGAGGTGGTGATCCATCCTaGCCGCCTCGGGGTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: QSCRFTDDVDGSHWCKKGGGDPS*PPRGPA Trigger: AGCCGGACCCCGAGGCGGGCAGGATGGATCACCACC...TCCTTTCTTACACCAATGTGAACCGTCCACATCATCTGTAAAGCGACAGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS-3UTR GCA 90 bp | AGGACTGGGCTCTGCTGCTACAACGTTATAGATTCTTTCAAGTATATGCATATCGGTGGTGATCCATCCTaGCCGCCTCGGGGTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTGLCCYNVIDSFKYMHIGGDPS*PPRGPA Trigger: AGCCGGACCCCGAGGCGGGCAGGATGGATCACCACC...GATATGCATATACTTGAAAGAATCTATAACGTTGTAGCAGCAGAGCCCAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR GCA 90 bp | AACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGTAGACTCACTTTCTCTGAGGTGCATCTGCTaGAGCAGCTGCCAGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NWRTPNLLFNWHLVDSLSLRCIC*SSCQGS Trigger: GCTGCCCTGGCAGCTGCTGCAGCAGATGCACCTCAG...AGAAAGTGAGTCTACCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | CTGAACACCCCTGAAACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGTCCTCTTGGTTTCTCTaGGGTGCATCTGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LNTPETGVPLTCSLTGIWSSWFL*GASAAA Trigger: TGCTGCAGCAGATGCACCTCAGAGAAACCAAGAGGA...CCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTTTCAGGGGTGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR GCA 90 bp | CTGAACACCCCTGAAACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGTTGGTTTCTCTGAGGTaGATCTGCTGCAGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LNTPETGVPLTCSLTGIWLVSLR*ICCSSC Trigger: GCAGCTGCTGCAGCAGATGCACCTCAGAGAAACCAA...CCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTTTCAGGGGTGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR GCA 90 bp | GAAGCGTCACGTGCTGGAAGGCTGCTCGTTACCCAATTCCTCCAATTGTATCAGGTACCTCGTCCTATGTaGAGCCGCCATACTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EASRAGRLLVTQFLQLYQVPRPM*SRHTFR Trigger: TCTGAAAGTATGGCGGCTGCACATAGGACGAGGTAC...CTGATACAATTGGAGGAATTGGGTAACGAGCAGCCTTCCAGCACGTGACGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR GCA 90 bp | AGGACTGGGCTCTGCTGCTACAACGTTATAGATTCTTTCAAGTATATGCATATCCTGAGGTGCATCTGCTaGAGCAGCTGCCAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTGLCCYNVIDSFKYMHILRCIC*SSCQGS Trigger: GCTGCCCTGGCAGCTGCTGCAGCAGATGCACCTCAG...GATATGCATATACTTGAAAGAATCTATAACGTTGTAGCAGCAGAGCCCAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR GCA 90 bp | CTGAACACCCCTGAAACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGTTGCCCACTCTGAGCTaGTCTACATCACTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNTPETGVPLTCSLTGIWLPTLS*STSLKS Trigger: TGACTTCAGTGATGTAGAGCAGCTCAGAGTGGGCAA...CCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTTTCAGGGGTGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR GCA 90 bp | CATCTGAACACCCCTGAAACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTTGCCCACTCTGAGCTaGTCTACATCACTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLNTPETGVPLTCSLTGILPTLS*STSLKS Trigger: TGACTTCAGTGATGTAGAGCAGCTCAGAGTGGGCAA...AATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTTTCAGGGGTGTTCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | TGTCGCTTTACAGATGATGTGGACGGTTCACATTGGTGTAAGAAAGGAATGATGTCCTCTTGGTTTCTCTaGGGTGCATCTGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CRFTDDVDGSHWCKKGMMSSWFL*GASAAA Trigger: TGCTGCAGCAGATGCACCTCAGAGAAACCAAGAGGA...CATCATTCCTTTCTTACACCAATGTGAACCGTCCACATCATCTGTAAAGCGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | AGGACTGGGCTCTGCTGCTACAACGTTATAGATTCTTTCAAGTATATGCATATCGCTGCTCTACATCACTaGAGTCATCCCGTGGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: RTGLCCYNVIDSFKYMHIAALHH*SHPVAY Trigger: GTACGCCACGGGATGACTTCAGTGATGTAGAGCAGC...GATATGCATATACTTGAAAGAATCTATAACGTTGTAGCAGCAGAGCCCAGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | AAAGCAGATTCCAGTTGGAGTAATGGCCACACAAACTCACCACACACACTCCACCAGCGATGGTATTGGTaGTACAGAAGGATAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KADSSWSNGHTNSPHTLHQRWYW*YRRISR Trigger: TCTGCTTATCCTTCTGTATCACCAATACCATCGCTG...GTGGAGTGTGTGTGGTGAGTTTGTGTGGCCATTACTCCAACTGGAATCTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS-3UTR CCA 90 bp | AACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGTAGACTCACTTTCTACTGAAGTCATCCCGTaGCGTACAGTCTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NWRTPNLLFNWHLVDSLSTEVIP*RTVFLL Trigger: CAAGAGGAAGACTGTACGCCACGGGATGACTTCAGT...AGAAAGTGAGTCTACCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR CCA 90 bp | CAAAGCTGTCGCTTTACAGATGATGTGGACGGTTCACATTGGTGTAAGAAAGGAACTGAAGTCATCCCGTaGCGTACAGTCTTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QSCRFTDDVDGSHWCKKGTEVIP*RTVFLL Trigger: CAAGAGGAAGACTGTACGCCACGGGATGACTTCAGT...TCCTTTCTTACACCAATGTGAACCGTCCACATCATCTGTAAAGCGACAGCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | GTAACCGAGCAGGACTGGGCTCTGCTGCTACAACGTTATAGATTCTTTCAAGTAGATCCATTTGATCAGTaGAAGGCCAAACCCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: VTEQDWALLLQRYRFFQVDPFDQ*KAKPTD Trigger: ATCTGTGGGTTTGGCCTTTCACTGATCAAATGGATC...TACTTGAAAGAATCTATAACGTTGTAGCAGCAGAGCCCAGTCCTGCTCGGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR GCA 90 bp | GTCTTCTATCTTAGCAAAGCTGTCGCTTTACAGATGATGTGGACGGTTCACATTGTACCTCGTCCTATGTaGAGCCGCCATACTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: VFYLSKAVALQMMWTVHIVPRPM*SRHTFR Trigger: TCTGAAAGTATGGCGGCTGCACATAGGACGAGGTAC...AATGTGAACCGTCCACATCATCTGTAAAGCGACAGCTTTGCTAAGATAGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | AGGACTGGGCTCTGCTGCTACAACGTTATAGATTCTTTCAAGTATATGCATATCCAGCGATGGTATTGGTaGTACAGAAGGATAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RTGLCCYNVIDSFKYMHIQRWYW*YRRISR Trigger: TCTGCTTATCCTTCTGTATCACCAATACCATCGCTG...GATATGCATATACTTGAAAGAATCTATAACGTTGTAGCAGCAGAGCCCAGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR TCA 90 bp | GATCTCAATTCAGGCTGTACGTTTTTACAAATTAGTCTTGGAATCACTAAACGAGATCCATTTGATCAGTaGAAGGCCAAACCCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: DLNSGCTFLQISLGITKRDPFDQ*KAKPTD Trigger: ATCTGTGGGTTTGGCCTTTCACTGATCAAATGGATC...TCGTTTAGTGATTCCAAGACTAATTTGTAAAAACGTACAGCCTGAATTGAGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS TCA 90 bp | CGCTCGCCGATCGGCGCCGGAGCTCCGGGGAGCCGCGCGCGCTACTaGGCATGCTCGGCGCGGACGCGCATGCTCTCTGGCTCCGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: RSPIGAGAPGSRARY*ACSARTRMLSGSAG Trigger: GCCGGCGGAGCCAGAGAGCATGCGCGTCCGCGCCGAGCATGCTCAGTAGCGCGCGCGGCTCCCCGGAGCTCCGGCGCCGATCGGCGAGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS CCA 90 bp | CGCAGAGCCTCTTCCGCCGCCTCGGGTTCTGCCGCCGAGGTCGCCTaGCGGGGCCGCTTCACTTCCTGTCGCTCCCTCGGCTCCAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: RRASSAASGSAAEVA*RGRFTSCRSLGSSG Trigger: TCCGCTGGAGCCGAGGGAGCGACAGGAAGTGAAGCGGCCCCGCCAGGCGACCTCGGCGGCAGAACCCGAGGCGGCGGAAGAGGCTCTGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS GCA 90 bp | ATGAAAAAGGCCAGCATGAAAATGCCGTCGTTGCCCACTCTGAGCTaGTCTACATCACTGAAGTCATCCCGTGGCGTACAGTCTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: MKKASMKMPSLPTLS*STSLKSSRGVQSSS Trigger: AGAGGAAGACTGTACGCCACGGGATGACTTCAGTGATGTAGAGCAGCTCAGAGTGGGCAACGACGGCATTTTCATGCTGGCCTTTTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR CAA 90 bp | CATCTGAACACCCCTGAAACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTATGAAAATGCCGTCGTaGCCCACTCTGAGCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: HLNTPETGVPLTCSLTGIMKMPS*PTLSCS Trigger: AGAGCAGCTCAGAGTGGGCAACGACGGCATTTTCAT...AATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTTTCAGGGGTGTTCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR CAA 90 bp | GTAACCGAGCAGGACTGGGCTCTGCTGCTACAACGTTATAGATTCTTTCAAGTACGTACAGTCTTCCTCTaGGTTTCTCTGAGGTGCATC | + |
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Preference number: 5 (lower is better) Translates to: VTEQDWALLLQRYRFFQVRTVFL*VSLRCI Trigger: GATGCACCTCAGAGAAACCAAGAGGAAGACTGTACG...TACTTGAAAGAATCTATAACGTTGTAGCAGCAGAGCCCAGTCCTGCTCGGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR CAA 90 bp | CAAAGCTGTCGCTTTACAGATGATGTGGACGGTTCACATTGGTGTAAGAAAGGAATGAAAATGCCGTCGTaGCCCACTCTGAGCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QSCRFTDDVDGSHWCKKGMKMPS*PTLSCS Trigger: AGAGCAGCTCAGAGTGGGCAACGACGGCATTTTCAT...TCCTTTCTTACACCAATGTGAACCGTCCACATCATCTGTAAAGCGACAGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS-3UTR CAA 90 bp | GAAGCGTCACGTGCTGGAAGGCTGCTCGTTACCCAATTCCTCCAATTGTATCAGCAGAACCCAAGCCAGTaGAATATGAATGCCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: EASRAGRLLVTQFLQLYQQNPSQ*NMNAMK Trigger: TTTCATGGCATTCATATTCAACTGGCTTGGGTTCTG...CTGATACAATTGGAGGAATTGGGTAACGAGCAGCCTTCCAGCACGTGACGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR CAA 90 bp | AACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGTAGACTCACTTTCTCGTACAGTCTTCCTCTaGGTTTCTCTGAGGTGCATC | + |
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Preference number: 5 (lower is better) Translates to: NWRTPNLLFNWHLVDSLSRTVFL*VSLRCI Trigger: GATGCACCTCAGAGAAACCAAGAGGAAGACTGTACG...AGAAAGTGAGTCTACCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR CAA 90 bp | CTGAACACCCCTGAAACTGGCGTACCCCTAACTTGCTCTTTAACTGGCATTTGGACAATAAGGATCCATTaGATCAGTGAAAGGCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LNTPETGVPLTCSLTGIWTIRIH*ISERPN Trigger: GTTTGGCCTTTCACTGATCAAATGGATCCTTATTGT...CCAAATGCCAGTTAAAGAGCAAGTTAGGGGTACGCCAGTTTCAGGGGTGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR CAA 90 bp | GTCTTCTATCTTAGCAAAGCTGTCGCTTTACAGATGATGTGGACGGTTCACATTCTTCCAGCGATGGTATaGGTGATACAGAAGGATAAG | + |
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Preference number: 5 (lower is better) Translates to: VFYLSKAVALQMMWTVHILPAMV*VIQKDK Trigger: CTTATCCTTCTGTATCACCAATACCATCGCTGGAAG...AATGTGAACCGTCCACATCATCTGTAAAGCGACAGCTTTGCTAAGATAGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS-3UTR CAA 90 bp | AGGACTGGGCTCTGCTGCTACAACGTTATAGATTCTTTCAAGTATATGCATATCCTTCCAGCGATGGTATaGGTGATACAGAAGGATAAG | + |
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Preference number: 5 (lower is better) Translates to: RTGLCCYNVIDSFKYMHILPAMV*VIQKDK Trigger: CTTATCCTTCTGTATCACCAATACCATCGCTGGAAG...GATATGCATATACTTGAAAGAATCTATAACGTTGTAGCAGCAGAGCCCAGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS-3UTR CAA 90 bp | TTCGTGTGTGGATTACTAGATGCATCTAAGAGGCAGAAAGTAAAGCACTGGACAACAATAAGGATCCATTaGATCAGTGAAAGGCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: FVCGLLDASKRQKVKHWTTIRIH*ISERPN Trigger: GTTTGGCCTTTCACTGATCAAATGGATCCTTATTGT...TGTCCAGTGCTTTACTTTCTGCCTCTTAGATGCATCTAGTAATCCACACACGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS TCA 72 bp | ATCGGCGCCGGAGCTCCGGGGAGCCGCGCGCGCTACTaGGCATGCTCGGCGCGGACGCGCATGCTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: IGAGAPGSRARY*ACSARTRMLSG Trigger: GCCAGAGAGCATGCGCGTCCGCGCCGAGCATGCTCAGTAGCGCGCGCGGCTCCCCGGAGCTCCGGCGCCGAT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181969.8 |
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| CDS CCA 72 bp | TCTTCCGCCGCCTCGGGTTCTGCCGCCGAGGTCGCCTaGCGGGGCCGCTTCACTTCCTGTCGCTCCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: SSAASGSAAEVA*RGRFTSCRSLG Trigger: GCCGAGGGAGCGACAGGAAGTGAAGCGGCCCCGCCAGGCGACCTCGGCGGCAGAACCCGAGGCGGCGGAAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS GCA 72 bp | GGTAGCGACCAGTCCCCAGCTGGTGGTGATCCATCCTaGCCGCCTCGGGGTCCGGCTTCCGAGCGGGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: GSDQSPAGGDPS*PPRGPASERAC Trigger: ACACGCCCGCTCGGAAGCCGGACCCCGAGGCGGGCAGGATGGATCACCACCAGCTGGGGACTGGTCGCTACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS CAA 90 bp | CTGCTCTACATCACTGAAGTCATCCCGTGGCGTACAGTCTTCCTCTaGGTTTCTCTGAGGTGCATCTGCTGCAGCAGCTGCCAGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLYITEVIPWRTVFL*VSLRCICCSSCQGS Trigger: GCTGCCCTGGCAGCTGCTGCAGCAGATGCACCTCAGAGAAACCAAGAGGAAGACTGTACGCCACGGGATGACTTCAGTGATGTAGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS GCA 72 bp | GCCAGCATGAAAATGCCGTCGTTGCCCACTCTGAGCTaGTCTACATCACTGAAGTCATCCCGTGGCGTACAG | + |
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Preference number: 6 (lower is better) Translates to: ASMKMPSLPTLS*STSLKSSRGVQ Trigger: CTGTACGCCACGGGATGACTTCAGTGATGTAGAGCAGCTCAGAGTGGGCAACGACGGCATTTTCATGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS CAA 72 bp | ATCACTGAAGTCATCCCGTGGCGTACAGTCTTCCTCTaGGTTTCTCTGAGGTGCATCTGCTGCAGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ITEVIPWRTVFL*VSLRCICCSSC Trigger: GCAGCTGCTGCAGCAGATGCACCTCAGAGAAACCAAGAGGAAGACTGTACGCCACGGGATGACTTCAGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS GCA 72 bp | TCCACAGTCGGCGCTGCTAAGCTAGAAGTTGACGGCTaGTCCACAGCAGATGATTCTGAGTTATCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: STVGAAKLEVDG*STADDSELSSS Trigger: TGAAGAAGATAACTCAGAATCATCTGCTGTGGAGCAGCCGTCAACTTCTAGCTTAGCAGCGCCGACTGTGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS CAA 90 bp | TTGAATATGAATGCCATGAAAAAGGCCAGCATGAAAATGCCGTCGTaGCCCACTCTGAGCTGCTCTACATCACTGAAGTCATCCCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LNMNAMKKASMKMPS*PTLSCSTSLKSSRG Trigger: GCCACGGGATGACTTCAGTGATGTAGAGCAGCTCAGAGTGGGCAACGACGGCATTTTCATGCTGGCCTTTTTCATGGCATTCATATTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS CAA 72 bp | AATGCCATGAAAAAGGCCAGCATGAAAATGCCGTCGTaGCCCACTCTGAGCTGCTCTACATCACTGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: NAMKKASMKMPS*PTLSCSTSLKS Trigger: TGACTTCAGTGATGTAGAGCAGCTCAGAGTGGGCAACGACGGCATTTTCATGCTGGCCTTTTTCATGGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS CAA 72 bp | AACCCACAGATAGCACCGTATCTTCCAGCGATGGTATaGGTGATACAGAAGGATAAGCAGAACCCAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: NPQIAPYLPAMV*VIQKDKQNPSQ Trigger: CTGGCTTGGGTTCTGCTTATCCTTCTGTATCACCAATACCATCGCTGGAAGATACGGTGCTATCTGTGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS CAA 90 bp | GAAAGGCCAAACCCACAGATAGCACCGTATCTTCCAGCGATGGTATaGGTGATACAGAAGGATAAGCAGAACCCAAGCCAGTTGAATATG | + |
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Preference number: 6 (lower is better) Translates to: ERPNPQIAPYLPAMV*VIQKDKQNPSQLNM Trigger: CATATTCAACTGGCTTGGGTTCTGCTTATCCTTCTGTATCACCAATACCATCGCTGGAAGATACGGTGCTATCTGTGGGTTTGGCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS TCA 72 bp | TGGCACAGGGTAAAACTCACTATACACGTCAGTATCTaGAGTGGTAGGAGCTTCCACAGTGATGCTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: WHRVKLTIHVSI*SGRSFHSDAAV Trigger: TACAGCAGCATCACTGTGGAAGCTCCTACCACTTCAGATACTGACGTGTATAGTGAGTTTTACCCTGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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| CDS CCA 72 bp | ATATGTAGGCAGAGAGGTAGCAACACTGTACGGAGGTaGCACAGGGTAAAACTCACTATACACGTCAGTATC | + |
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Preference number: 6 (lower is better) Translates to: ICRQRGSNTVRR*HRVKLTIHVSI Trigger: GATACTGACGTGTATAGTGAGTTTTACCCTGTGCCACCTCCGTACAGTGTTGCTACCTCTCTGCCTACATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138283.2 ENSMUST00000181969.8 |
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