Pregenerated sensors for NDFIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024425Ensembl transcript IDs: ENSMUST00000025293.5, ENSMUST00000236052.2, ENSMUST00000236085.2, ENSMUST00000236171.2, ENSMUST00000236480.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGCCTCCATTCTGGTGGTaGTTCACTTCCTGCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LFLHSGGDSLPAGALASQPPFWW*FTSCRC Trigger: GCACCTGCAGGAAGTGAATCACCACCAGAATGGAGG...CTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 ENSMUST00000236480.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGACTGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTAGGGGACTTCATCAGTaGAGGAAGCCTTTGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GDCSSILVVIHFLQVLSLRGLHQ*RKPLPE Trigger: TTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCT...AAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACAGTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 ENSMUST00000236480.2 |
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| 3UTR CAA 90 bp | CAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTaGCCAGAAAACATCTGCCAGAGAAGGACACTGAACAGTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: QVLSLLRGLHQCRKP*PENICQRRTLNSQT Trigger: AGTTTGACTGTTCAGTGTCCTTCTCTGGCAGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236171.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATGAACTTTGCACTATGGTTTTGCTTCCAGGTGTTCACACACAGTACAATTAAGATTGCCCCCTACTaGCTACAGGGACATGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TMNFALWFCFQVFTHSTIKIAPY*LQGHGS Trigger: TGAGCCATGTCCCTGTAGTCAGTAGGGGGCAATCTT...AATTGTACTGTGTGTGAACACCTGGAAGCAAAACCATAGTGCAAAGTTCATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCATCTTCCGAACTTTTaGGTAATTGATAAATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ILVVIHFLQVLSLLRGLHHLPNF*VIDKSS Trigger: AGAGGATTTATCAATTACGCAAAAGTTCGGAAGATG...ATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236480.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCACTATGGTTTTGCTTCCAGGTGTTCACACACAGTACAATTAAACATATTTAGGGGACTTCATCAGTaGAGGAAGCCTTTGCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LHYGFASRCSHTVQLNIFRGLHQ*RKPLPE Trigger: TTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCT...AAATATGTTTAATTGTACTGTGTGTGAACACCTGGAAGCAAAACCATAGTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCACTATGGTTTTGCTTCCAGGTGTTCACACACAGTACAATTAAACATATTTAGTGCAGGAAGCCTTTaGCAGAAAACATCTGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LHYGFASRCSHTVQLNIFSAGSL*QKTSAR Trigger: TCTGGCAGATGTTTTCTGGCAAAGGCTTCCTGCACT...AAATATGTTTAATTGTACTGTGTGTGAACACCTGGAAGCAAAACCATAGTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025293.5 ENSMUST00000236171.2 |
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| 3UTR-3UTR CCA 90 bp | ACAATGAACTTTGCACTATGGTTTTGCTTCCAGGTGTTCACACACAGTACAATTCTGACTACAGGGACATaGCTCATGCTATTTAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: TMNFALWFCFQVFTHSTILTTGT*LMLFKM Trigger: CATTTTAAATAGCATGAGCCATGTCCCTGTAGTCAG...AATTGTACTGTGTGTGAACACCTGGAAGCAAAACCATAGTGCAAAGTTCATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCATGGTCCTGGGGAGATTaGAGAAAGTTTCTGGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SGGDSLPAGALASQGTSSWSWGD*RKFLAS Trigger: AGATGCCAGAAACTTTCTCAAATCTCCCCAGGACCA...TGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236480.2 |
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| 3UTR GCA 72 bp | CTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTaGAGGAAGCCTTTGCCAGAAAACATCTTTAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: LQVLSLLRGLHQ*RKPLPENIFNK Trigger: TTTATTAAAGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236480.2 |
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| 3UTR GCA 72 bp | CTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCTaGCAGAGAAGGACACTGAACAGTCAAACTCTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LHQCRKPLPENI*QRRTLNSQTLV Trigger: AACTAGAGTTTGACTGTTCAGTGTCCTTCTCTGGCAGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236171.2 |
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| 3UTR TCA 72 bp | GATCCTCTCAAAAGTTCCAAACTAATTCTGTGTTCCTaGCCCTCTGAGAGTCTAGCCAGCTTCCAGAATAAT | + |
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Preference number: 3 (lower is better) Translates to: DPLKSSKLILCS*PSESLASFQNN Trigger: ATTATTCTGGAAGCTGGCTAGACTCTCAGAGGGTCAGGAACACAGAATTAGTTTGGAACTTTTGAGAGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236052.2 ENSMUST00000236085.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGAGAAAACCCCTTTCAAACAGCCAGCCGTATACATAGCTTACACTAATCTGATGAATAAAGCAAGATaGCCCCCTACTGACTACAGG | + |
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Preference number: 3 (lower is better) Translates to: FEKTPFKQPAVYIAYTNLMNKAR*PPTDYR Trigger: CCTGTAGTCAGTAGGGGGCAATCTTGCTTTATTCAT...CAGATTAGTGTAAGCTATGTATACGGCTGGCTGTTTGAAAGGGGTTTTCTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTACATTATAACAGTTGTGAAAGCAAGGAGTACAGAATGCTAGGGATCCTCCTTTGCACTATGGTTTaGCTTCCAGGTGTTCACACA | + |
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Preference number: 3 (lower is better) Translates to: ILHYNSCESKEYRMLGILLCTMV*LPGVHT Trigger: TGTGTGAACACCTGGAAGCAAAACCATAGTGCAAAG...GAGGATCCCTAGCATTCTGTACTCCTTGCTTTCACAACTGTTATAATGTAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236052.2 ENSMUST00000236085.2 |
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| 3UTR-3UTR CAA 90 bp | GAACAGGAAATATGGACTATGTGCAGAAATGCTGTCATAACCAAAGTTTTGACTATGAATAAAGCAAGATaGCCCCCTACTGACTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: EQEIWTMCRNAVITKVLTMNKAR*PPTDYR Trigger: CCTGTAGTCAGTAGGGGGCAATCTTGCTTTATTCAT...AGTCAAAACTTTGGTTATGACAGCATTTCTGCACATAGTCCATATTTCCTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| 3UTR GCA 72 bp | TTTGGTAACACTACAATGAACTTTGCACTATGGTTTTaGTTCCAGGTGTTCACACACAGTACAATTAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: FGNTTMNFALWF*FQVFTHSTIKH Trigger: ATGTTTAATTGTACTGTGTGTGAACACCTGGAAGCAAAACCATAGTGCAAAGTTCATTGTAGTGTTACCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR GCA 90 bp | TTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGACTGCTGGTACCCGCTaGCGCAGGCCGGCTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: FLQVLSLLRGLHQCRKPLTAGTR*RRPAPR Trigger: CCGTGGAGCCGGCCTGCGGCAGCGGGTACCAGCAGT...CAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | GATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAACTGCTGGTACCCGCTaGCGCAGGCCGGCTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: DSLPAGALASQGTSSVQETAGTR*RRPAPR Trigger: CCGTGGAGCCGGCCTGCGGCAGCGGGTACCAGCAGT...TTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | TCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTGGAGGAGCATCACCTaGAGTCTGCTCAGGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPAGALASQGTSSVQEAWRSIT*SLLRFP Trigger: GGGGAACCTGAGCAGACTGCAGGTGATGCTCCTCCA...GGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | TCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTCTTCATTCTGCAACTaGTGGTACCCGCTGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPAGALASQGTSSVQEASSFCN*WYPLPQ Trigger: CTGCGGCAGCGGGTACCAGCAGTTGCAGAATGAAGA...GGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | TCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGCATCACCTGCAGTCTaGTCAGGTTCCCCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGGDSLPAGALASQGTSSASPAV*SGSPGS Trigger: GGAGCCTGGGGAACCTGAGCAGACTGCAGGTGATGC...TGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | GATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAATCATTCTGCAACTGCTaGTACCCGCTGCCGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: DSLPAGALASQGTSSVQESFCNC*YPLPQA Trigger: GGCCTGCGGCAGCGGGTACCAGCAGTTGCAGAATGA...TTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGTCATTCTGCAACTGCTaGTACCCGCTGCCGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CSSILVVIHFLQVLSLLRSFCNC*YPLPQA Trigger: GGCCTGCGGCAGCGGGTACCAGCAGTTGCAGAATGA...CCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | TGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACAGCATCACCTGCAGTCTaGTCAGGTTCCCCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CSRFSGDFISAGSLCQKTASPAV*SGSPGS Trigger: GGAGCCTGGGGAACCTGAGCAGACTGCAGGTGATGC...TGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | GCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATGCATCACCTGCAGTCTaGTCAGGTTCCCCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ALASQGTSSVQEAFARKHASPAV*SGSPGS Trigger: GGAGCCTGGGGAACCTGAGCAGACTGCAGGTGATGC...ATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | GGTGACTGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTTGGAGGAGCATCACCTaGAGTCTGCTCAGGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GDCSSILVVIHFLQVLSLWRSIT*SLLRFP Trigger: GGGGAACCTGAGCAGACTGCAGGTGATGCTCCTCCA...AAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACAGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | GGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAATGGAGGAGCATCACCTaGAGTCTGCTCAGGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GALASQGTSSVQEAFARKWRSIT*SLLRFP Trigger: GGGGAACCTGAGCAGACTGCAGGTGATGCTCCTCCA...TTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | CTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTCGTGATGCTGCTGTATaGTGGAGGAGCATCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: LPAGALASQGTSSVQEAFRDAAV*WRSITC Trigger: GCAGGTGATGCTCCTCCACCATACAGCAGCATCACG...AAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | TGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGTCTTCATTCTGCAACTaGTGGTACCCGCTGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: CSSILVVIHFLQVLSLLRSSFCN*WYPLPQ Trigger: CTGCGGCAGCGGGTACCAGCAGTTGCAGAATGAAGA...CCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGCGTGATGCTGCTGTATaGTGGAGGAGCATCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: CSSILVVIHFLQVLSLLRRDAAV*WRSITC Trigger: GCAGGTGATGCTCCTCCACCATACAGCAGCATCACG...CCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | TCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCGTGATGCTGCTGTATaGTGGAGGAGCATCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: SILVVIHFLQVLSLLRGLRDAAV*WRSITC Trigger: GCAGGTGATGCTCCTCCACCATACAGCAGCATCACG...AAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | GGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCACCAGAGCCAGTACTaGCCATCAAAGTATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GGDSLPAGALASQGTSSVHQSQY*PSKYPG Trigger: CCCTGGATACTTTGATGGCCAGTACTGGCTCTGGTG...CACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 ENSMUST00000236480.2 |
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| CDS-3UTR TCA 90 bp | GTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATACCTTCCCGCAGCTaGGGTGGTCAGGCAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: VLSLLRGLHQCRKPLPENIPSRS*GGQAKR Trigger: TCTTTTTGCCTGACCACCTCAGCTGCGGGAAGGTAT...GTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR TCA 90 bp | TCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTATACCTTCCCGCAGCTaGGGTGGTCAGGCAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SILVVIHFLQVLSLLRGLIPSRS*GGQAKR Trigger: TCTTTTTGCCTGACCACCTCAGCTGCGGGAAGGTAT...AAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR GCA 90 bp | CTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCGGCTCCTCTTCATTCTaGAACTGCTGGTACCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSLLRGLHQCRKPLPENIGSSSF*NCWYPL Trigger: CAGCGGGTACCAGCAGTTGCAGAATGAAGAGGAGCC...GATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | TGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACAGGCTCCTCTTCATTCTaGAACTGCTGGTACCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: CSRFSGDFISAGSLCQKTGSSSF*NCWYPL Trigger: CAGCGGGTACCAGCAGTTGCAGAATGAAGAGGAGCC...TGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | CTGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGATGCTGCTGTATGGTaGAGGAGCATCACCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LFLHSGGDSLPAGALASQDAAVW*RSITCS Trigger: ACTGCAGGTGATGCTCCTCCACCATACAGCAGCATC...CTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | TGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACACGTGATGCTGCTGTATaGTGGAGGAGCATCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: CSRFSGDFISAGSLCQKTRDAAV*WRSITC Trigger: GCAGGTGATGCTCCTCCACCATACAGCAGCATCACG...TGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | GGTGACTGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCACCAGAGCCAGTACTaGCCATCAAAGTATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GDCSSILVVIHFLQVLSLHQSQY*PSKYPG Trigger: CCCTGGATACTTTGATGGCCAGTACTGGCTCTGGTG...AAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACAGTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | GATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAACACCAGAGCCAGTACTaGCCATCAAAGTATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: DSLPAGALASQGTSSVQEHQSQY*PSKYPG Trigger: CCCTGGATACTTTGATGGCCAGTACTGGCTCTGGTG...TTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | CTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCCACCAGAGCCAGTACTaGCCATCAAAGTATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LSLLRGLHQCRKPLPENIHQSQY*PSKYPG Trigger: CCCTGGATACTTTGATGGCCAGTACTGGCTCTGGTG...GATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | ATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCACCAGAGCCAGTACTaGCCATCAAAGTATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ILVVIHFLQVLSLLRGLHHQSQY*PSKYPG Trigger: CCCTGGATACTTTGATGGCCAGTACTGGCTCTGGTG...ATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 ENSMUST00000236480.2 |
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| CDS-3UTR TCA 90 bp | TCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCTATACCTTCCCGCAGCTaGGGTGGTCAGGCAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SRFSGDFISAGSLCQKTSIPSRS*GGQAKR Trigger: TCTTTTTGCCTGACCACCTCAGCTGCGGGAAGGTAT...AGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR CCA 90 bp | AGAACTCTGGTCCTGGGGAGATTTGAGAAAGTTTCTGGCATCTTCCGAACTTTTTCATTCTGCAACTGCTaGTACCCGCTGCCGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RTLVLGRFEKVSGIFRTFSFCNC*YPLPQA Trigger: GGCCTGCGGCAGCGGGTACCAGCAGTTGCAGAATGA...AAAAGTTCGGAAGATGCCAGAAACTTTCTCAAATCTCCCCAGGACCAGAGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236480.2 |
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| CDS-3UTR TCA 90 bp | CTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCTTAAAACTTCCCGCAGCTaGGGTGGTCAGGCAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LASQGTSSVQEAFARKHLKTSRS*GGQAKR Trigger: TCTTTTTGCCTGACCACCTCAGCTGCGGGAAGTTTT...AAGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | TTGCACTATGGTTTTGCTTCCAGGTGTTCACACACAGTACAATTAAACATATTTACTGCTGGTACCCGCTaGCGCAGGCCGGCTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: LHYGFASRCSHTVQLNIFTAGTR*RRPAPR Trigger: CCGTGGAGCCGGCCTGCGGCAGCGGGTACCAGCAGT...AAATATGTTTAATTGTACTGTGTGTGAACACCTGGAAGCAAAACCATAGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 |
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| CDS-3UTR CCA 90 bp | TCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCATACGATGGGGGCTTTaGAAATCCAGATTCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLPAGALASQGTSSVQEAIRWGL*KSRFIF Trigger: AAAGATGAATCTGGATTTCCAAAGCCCCCATCGTAT...GGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR TCA 90 bp | CTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTAACATTTCAGAGGCTTaGTATCTTCTCATTATGGCG | + |
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Preference number: 4 (lower is better) Translates to: LPAGALASQGTSSVQEAFNISEA*YLLIMA Trigger: CGCCATAATGAGAAGATATCAAGCCTCTGAAATGTT...AAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236052.2 |
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| CDS-3UTR GCA 90 bp | TTTGAGAAAACCCCTTTCAAACAGCCAGCCGTATACATAGCTTACACTAATCTGGCATCACCTGCAGTCTaGTCAGGTTCCCCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FEKTPFKQPAVYIAYTNLASPAV*SGSPGS Trigger: GGAGCCTGGGGAACCTGAGCAGACTGCAGGTGATGC...CAGATTAGTGTAAGCTATGTATACGGCTGGCTGTTTGAAAGGGGTTTTCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 |
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| CDS-3UTR CCA 90 bp | CGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCTGCCAGAGAACTCTGGTCCTaGGGAGATTTGAGAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: RFSGDFISAGSLCQKTSARELWS*GDLRKF Trigger: AAACTTTCTCAAATCTCCCCAGGACCAGAGTTCTCT...GGCAGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025293.5 ENSMUST00000236171.2 |
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| CDS-3UTR CCA 90 bp | CTGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGAGAGAACTCTGGTCCTaGGGAGATTTGAGAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LFLHSGGDSLPAGALASQRELWS*GDLRKF Trigger: AAACTTTCTCAAATCTCCCCAGGACCAGAGTTCTCT...CTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR CCA 90 bp | TCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTATACGATGGGGGCTTTaGAAATCCAGATTCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: SILVVIHFLQVLSLLRGLIRWGL*KSRFIF Trigger: AAAGATGAATCTGGATTTCCAAAGCCCCCATCGTAT...AAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGATACGATGGGGGCTTTaGAAATCCAGATTCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: CSSILVVIHFLQVLSLLRIRWGL*KSRFIF Trigger: AAAGATGAATCTGGATTTCCAAAGCCCCCATCGTAT...CCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | AGTTTCTGGCATCTTCCGAACTTTTGCGTAATTGATAAATCCTCTGAGAAACAGTGGAGGAGCATCACCTaGAGTCTGCTCAGGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SFWHLPNFCVIDKSSEKQWRSIT*SLLRFP Trigger: GGGGAACCTGAGCAGACTGCAGGTGATGCTCCTCCA...CTGTTTCTCAGAGGATTTATCAATTACGCAAAAGTTCGGAAGATGCCAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236480.2 |
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| CDS-3UTR CCA 90 bp | CTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCATACGATGGGGGCTTTaGAAATCCAGATTCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: LSLLRGLHQCRKPLPENIIRWGL*KSRFIF Trigger: AAAGATGAATCTGGATTTCCAAAGCCCCCATCGTAT...GATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR GCA 90 bp | CGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCTGCCCATCTTCCGAACTTTTaGGTAATTGATAAATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RFSGDFISAGSLCQKTSAHLPNF*VIDKSS Trigger: AGAGGATTTATCAATTACGCAAAAGTTCGGAAGATG...GGCAGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025293.5 ENSMUST00000236171.2 |
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| CDS-3UTR GCA 90 bp | GAACAGGAAATATGGACTATGTGCAGAAATGCTGTCATAACCAAAGTTTTGACTGGCTCCTCTTCATTCTaGAACTGCTGGTACCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: EQEIWTMCRNAVITKVLTGSSSF*NCWYPL Trigger: CAGCGGGTACCAGCAGTTGCAGAATGAAGAGGAGCC...AGTCAAAACTTTGGTTATGACAGCATTTCTGCACATAGTCCATATTTCCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 |
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| CDS-3UTR GCA 90 bp | TCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCTGCCATCTTCCGAACTTTTaGGTAATTGATAAATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SLLRGLHQCRKPLPENICHLPNF*VIDKSS Trigger: AGAGGATTTATCAATTACGCAAAAGTTCGGAAGATG...GCAGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025293.5 ENSMUST00000236171.2 |
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| CDS-3UTR CCA 90 bp | ACAATGAACTTTGCACTATGGTTTTGCTTCCAGGTGTTCACACACAGTACAATTGATGCTGCTGTATGGTaGAGGAGCATCACCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TMNFALWFCFQVFTHSTIDAAVW*RSITCS Trigger: ACTGCAGGTGATGCTCCTCCACCATACAGCAGCATC...AATTGTACTGTGTGTGAACACCTGGAAGCAAAACCATAGTGCAAAGTTCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 |
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| CDS-3UTR GCA 90 bp | TCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAACATCTCATCTTCCGAACTTTTaGGTAATTGATAAATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SRFSGDFISAGSLCQKTSHLPNF*VIDKSS Trigger: AGAGGATTTATCAATTACGCAAAAGTTCGGAAGATG...AGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR CCA 90 bp | TTGCACTATGGTTTTGCTTCCAGGTGTTCACACACAGTACAATTAAACATATTTAGAGAACTCTGGTCCTaGGGAGATTTGAGAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LHYGFASRCSHTVQLNIFRELWS*GDLRKF Trigger: AAACTTTCTCAAATCTCCCCAGGACCAGAGTTCTCT...AAATATGTTTAATTGTACTGTGTGTGAACACCTGGAAGCAAAACCATAGTGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS GCA 90 bp | TCTGCCGTGATGCTGCTGTATGGTGGAGGAGCATCACCTGCAGTCTaGTCAGGTTCCCCAGGCTCCTCTTCATTCTGCAACTGCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: SAVMLLYGGGASPAV*SGSPGSSSFCNCWY Trigger: GTACCAGCAGTTGCAGAATGAAGAGGAGCCTGGGGAACCTGAGCAGACTGCAGGTGATGCTCCTCCACCATACAGCAGCATCACGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025293.5 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS CCA 90 bp | GTAGTCAAAATATGCTGCACTCTCTGCCGTGATGCTGCTGTATGGTaGAGGAGCATCACCTGCAGTCTGCTCAGGTTCCCCAGGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: VVKICCTLCRDAAVW*RSITCSLLRFPRLL Trigger: GAGGAGCCTGGGGAACCTGAGCAGACTGCAGGTGATGCTCCTCCACCATACAGCAGCATCACGGCAGAGAGTGCAGCATATTTTGACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS CCA 90 bp | TTTGTAGTCAAAATATGCTGCACTCTCTGCCGTGATGCTGCTGTATaGTGGAGGAGCATCACCTGCAGTCTGCTCAGGTTCCCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: FVVKICCTLCRDAAV*WRSITCSLLRFPRL Trigger: GAGCCTGGGGAACCTGAGCAGACTGCAGGTGATGCTCCTCCACCATACAGCAGCATCACGGCAGAGAGTGCAGCATATTTTGACTACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CAA 90 bp | TTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGTGGTCCTGGGGAGATTaGAGAAAGTTTCTGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: FLQVLSLLRGLHQCRKPLWSWGD*RKFLAS Trigger: AGATGCCAGAAACTTTCTCAAATCTCCCCAGGACCA...CAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR CAA 90 bp | GGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGCCAGAAAATGGTCCTGGGGAGATTaGAGAAAGTTTCTGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: GALASQGTSSVQEAFARKWSWGD*RKFLAS Trigger: AGATGCCAGAAACTTTCTCAAATCTCCCCAGGACCA...TTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR CAA 90 bp | GGTGACTGTTCCTCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTTGGTCCTGGGGAGATTaGAGAAAGTTTCTGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: GDCSSILVVIHFLQVLSLWSWGD*RKFLAS Trigger: AGATGCCAGAAACTTTCTCAAATCTCCCCAGGACCA...AAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGAGGAACAGTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR CAA 90 bp | TTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTGTATACGATGGGGGCTTaGGAAATCCAGATTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: FLQVLSLLRGLHQCRKPLYTMGA*EIQIHL Trigger: AAGATGAATCTGGATTTCCAAAGCCCCCATCGTATA...CAAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CAA 90 bp | TCCATTCTGGTGGTGATTCACTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTTATACGATGGGGGCTTaGGAAATCCAGATTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: SILVVIHFLQVLSLLRGLYTMGA*EIQIHL Trigger: AAGATGAATCTGGATTTCCAAAGCCCCCATCGTATA...AAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAGTGAATCACCACCAGAATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS-3UTR CAA 90 bp | CTTCCTGCAGGTGCTCTCGCTTCTCAGGGGACTTCATCAGTGCAGGAAGCCTTTAAAAACCCAATCCAGTaGAAGAGGAATGCCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: LPAGALASQGTSSVQEAFKNPIQ*KRNAMK Trigger: TTTCATGGCATTCCTCTTCAACTGGATTGGGTTTTT...AAAGGCTTCCTGCACTGATGAAGTCCCCTGAGAAGCGAGAGCACCTGCAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 ENSMUST00000236480.2 |
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| CDS-3UTR CAA 90 bp | ATAAAGAGAACTCTGGTCCTGGGGAGATTTGAGAAAGTTTCTGGCATCTTCCGATATACGATGGGGGCTTaGGAAATCCAGATTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: IKRTLVLGRFEKVSGIFRYTMGA*EIQIHL Trigger: AAGATGAATCTGGATTTCCAAAGCCCCCATCGTATA...TCGGAAGATGCCAGAAACTTTCTCAAATCTCCCCAGGACCAGAGTTCTCTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236480.2 |
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| CDS-3UTR CAA 90 bp | ACAATGAACTTTGCACTATGGTTTTGCTTCCAGGTGTTCACACACAGTACAATTTGGTCCTGGGGAGATTaGAGAAAGTTTCTGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TMNFALWFCFQVFTHSTIWSWGD*RKFLAS Trigger: AGATGCCAGAAACTTTCTCAAATCTCCCCAGGACCA...AATTGTACTGTGTGTGAACACCTGGAAGCAAAACCATAGTGCAAAGTTCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236171.2 |
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| CDS-3UTR CAA 90 bp | ATTCTACATTATAACAGTTGTGAAAGCAAGGAGTACAGAATGCTAGGGATCCTCTATACGATGGGGGCTTaGGAAATCCAGATTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILHYNSCESKEYRMLGILYTMGA*EIQIHL Trigger: AAGATGAATCTGGATTTCCAAAGCCCCCATCGTATA...GAGGATCCCTAGCATTCTGTACTCCTTGCTTTCACAACTGTTATAATGTAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236052.2 ENSMUST00000236085.2 |
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| CDS CCA 72 bp | ATATGCTGCACTCTCTGCCGTGATGCTGCTGTATGGTaGAGGAGCATCACCTGCAGTCTGCTCAGGTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ICCTLCRDAAVW*RSITCSLLRFP Trigger: GGGGAACCTGAGCAGACTGCAGGTGATGCTCCTCCACCATACAGCAGCATCACGGCAGAGAGTGCAGCATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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| CDS CCA 72 bp | AAAATATGCTGCACTCTCTGCCGTGATGCTGCTGTATaGTGGAGGAGCATCACCTGCAGTCTGCTCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: KICCTLCRDAAV*WRSITCSLLRF Trigger: GAACCTGAGCAGACTGCAGGTGATGCTCCTCCACCATACAGCAGCATCACGGCAGAGAGTGCAGCATATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025293.5 ENSMUST00000236052.2 ENSMUST00000236085.2 ENSMUST00000236480.2 |
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