Pregenerated sensors for NDEL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018736Ensembl transcript IDs: ENSMUST00000018880.14, ENSMUST00000101017.9, ENSMUST00000108672.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCATTGAACTGAGGGCCTGGAATGCTGGCGAGGAGATTGCCACCTaGCTCCTGAGTCTGAGGACAGAGGAGAAGGCAACACAGAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: VIELRAWNAGEEIAT*LLSLRTEEKATQRL Trigger: GAGCCTCTGTGTTGCCTTCTCCTCTGTCCTCAGACTCAGGAGGCAGGTGGCAATCTCCTCGCCAGCATTCCAGGCCCTCAGTTCAATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR TCA 90 bp | CGGCTGCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTaGGAAACAAGCAATGGAATGGACTGCTTACATAAAGTCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: RLPLPPAAQTGISLL*ETSNGMDCLHKVRR Trigger: CCTTCTGACTTTATGTAAGCAGTCCATTCCATTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGCAGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR GCA 90 bp | TGTCCCGGCTGCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTaGTTTGAGAAACAAGCAATGGAATGGACTGCTTACATAAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: CPGCPCLLQLRQVSR*FEKQAMEWTAYIKS Trigger: TGACTTTATGTAAGCAGTCCATTCCATTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGCAGCCGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR TCA 90 bp | CAGGCTATGTACAAACTATCTCCCCTGTCCTTAAAGAAGATTTGCTaGGTCTCCCACGCTGTAAGGATCTGGAGAGCAGGCCCACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: QAMYKLSPLSLKKIC*VSHAVRIWRAGPQE Trigger: CTCCTGTGGGCCTGCTCTCCAGATCCTTACAGCGTGGGAGACTCAGCAAATCTTCTTTAAGGACAGGGGAGATAGTTTGTACATAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR TCA 90 bp | ATGGACCTTCAGAGGAGAAAACAAAAATGCTCTGAGAGATGTCATTaGACTGAGGGCCTGGAATGCTGGCGAGGAGATTGCCACCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: MDLQRRKQKCSERCH*TEGLECWRGDCHLP Trigger: AGGCAGGTGGCAATCTCCTCGCCAGCATTCCAGGCCCTCAGTTCAATGACATCTCTCAGAGCATTTTTGTTTTCTCCTCTGAAGGTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR TCA 90 bp | GAGATTGCCACCTGCCTCCTGAGTCTGAGGACAGAGGAGAAGGCAACACAGAGGGCCCTCTGCCAGCGGTaGAGAGGCGGACAGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: EIATCLLSLRTEEKATQRALCQR*RGGQRG Trigger: GCCCCTCTGTCCGCCTCTTCACCGCTGGCAGAGGGC...CCTCTGTGTTGCCTTCTCCTCTGTCCTCAGACTCAGGAGGCAGGTGGCAATCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGATGTTCCTGACTCTGACAGAAACAGGCCTGAACTGCAGGGGTGAGGCTGGTGTCCTGGGCTGCTaGAAGAGGGCAGGGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SEMFLTLTETGLNCRGEAGVLGC*KRAGAP Trigger: TGGGGCCCCTGCCCTCTTCCAGCAGCCCAGGACACC...AGCCTCACCCCTGCAGTTCAGGCCTGTTTCTGTCAGAGTCAGGAACATCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCCAGAATCAGGCCCCTCAACCCTTCCCAATGCAACTGGATGGACCTTCAGAGATGTCATTGAACTaGGGGCCTGGAATGCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: QPQNQAPQPFPMQLDGPSEMSLN*GPGMLA Trigger: CGCCAGCATTCCAGGCCCTCAGTTCAATGACATCTC...TGAAGGTCCATCCAGTTGCATTGGGAAGGGTTGAGGGGCCTGATTCTGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCAACCCTTCCCAATGCAACTGGATGGACCTTCAGAGGAGAAAACAAAAATGCCCATGTCCCGGCTaGCCCTGCCTCCTGCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PLNPSQCNWMDLQRRKQKCPCPG*PCLLQL Trigger: GAGCTGCAGGAGGCAGGGGCAGCCGGGACATGGGCA...TTTTTGTTTTCTCCTCTGAAGGTCCATCCAGTTGCATTGGGAAGGGTTGAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCCAGAATCAGGCCCCTCAACCCTTCCCAATGCAACTGGATGGACCTTCAGAGGAGATTGCCACCTaGCTCCTGAGTCTGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: QPQNQAPQPFPMQLDGPSEEIAT*LLSLRT Trigger: TGTCCTCAGACTCAGGAGGCAGGTGGCAATCTCCTC...TGAAGGTCCATCCAGTTGCATTGGGAAGGGTTGAGGGGCCTGATTCTGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR CAA 90 bp | AGCAGGCCCACAGGAGCTCTGCAGATCCTCCTGAGCCCAGCACAGTaGCCTGTAAGAGTCTATGCCCAGGAAAGAAGCTGTAGATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SRPTGALQILLSPAQ*PVRVYAQERSCRFQ Trigger: CTGGAATCTACAGCTTCTTTCCTGGGCATAGACTCTTACAGGCAACTGTGCTGGGCTCAGGAGGATCTGCAGAGCTCCTGTGGGCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATTGCCACCTGCCTCCTGAGTCTGAGGACAGAGGAGAAGGCAACACAGAGGAAAAGTGCAATCATGTaGAACCAACGGCACTACGGC | + |
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Preference number: 2 (lower is better) Translates to: EIATCLLSLRTEEKATQRKSAIM*NQRHYG Trigger: GCCGTAGTGCCGTTGGTTTCACATGATTGCACTTTT...CCTCTGTGTTGCCTTCTCCTCTGTCCTCAGACTCAGGAGGCAGGTGGCAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCCAGAATCAGGCCCCTCAACCCTTCCCAATGCAACTGGATGGACCTTCACATGATTGTGAGCACTaGAGATGCTTGGCAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: QPQNQAPQPFPMQLDGPSHDCEH*RCLAEA Trigger: AGCTTCTGCCAAGCATCTTCAGTGCTCACAATCATG...TGAAGGTCCATCCAGTTGCATTGGGAAGGGTTGAGGGGCCTGATTCTGGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR TCA 90 bp | GACAAACACCTAGCCAGTCTGCCCCCGAGAGCTGGCATTAGCCAGCCCCAGAATTACTTCCACATCCAGTaGTCGAGTAATACACGTATG | + |
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Preference number: 2 (lower is better) Translates to: DKHLASLPPRAGISQPQNYFHIQ*SSNTRM Trigger: CATACGTGTATTACTCGATCACTGGATGTGGAAGTA...ATTCTGGGGCTGGCTAATGCCAGCTCTCGGGGGCAGACTGGCTAGGTGTTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR TCA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCTCTGCAGATCCTCCTaGGCCCAGCACAGTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VGNTLSTRLALDSHLYITLCRSS*AQHSCL Trigger: CAGGCAACTGTGCTGGGCTCAGGAGGATCTGCAGAG...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCAACCCTTCCCAATGCAACTGGATGGACCTTCAGAGGAGAAAACAAAAAGAAACAGGCCTGAACTaGAGGGGTGAGGCTAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PLNPSQCNWMDLQRRKQKETGLN*RGEARG Trigger: TCCCCTAGCCTCACCCCTGCAGTTCAGGCCTGTTTC...TTTTTGTTTTCTCCTCTGAAGGTCCATCCAGTTGCATTGGGAAGGGTTGAGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATCTCTGCAGATCCTCCTaGGCCCAGCACAGTTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LSTRLALDSHLYITQCLNLCRSS*AQHSCL Trigger: CAGGCAACTGTGCTGGGCTCAGGAGGATCTGCAGAG...ATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCACGCTGTAAGGATCTaGAGAGCAGGCCCACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VGNTLSTRLALDSHLYITHAVRI*RAGPQE Trigger: CTCCTGTGGGCCTGCTCTCCAGATCCTTACAGCGTG...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGATGTTCCTGACTCTGACAGAAACAGGCCTGAACTGCAGGGGTGAGGCTTCTTATCAACCTGATTaGGGGGAAACTTCTAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SEMFLTLTETGLNCRGEASYQPD*GETSRR Trigger: TCTTCTAGAAGTTTCCCCTCAATCAGGTTGATAAGA...AGCCTCACCCCTGCAGTTCAGGCCTGTTTCTGTCAGAGTCAGGAACATCTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATCTCTCTTCTGGGACTTaGACAAGAAGAGCAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LSTRLALDSHLYITQCLNLSSGT*TRRAGN Trigger: GTTTCCTGCTCTTCTTGTTCAAGTCCCAGAAGAGAG...ATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCGGGCAGCAAACTCCTTaGAAACCACAAGACAATAAC | + |
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Preference number: 2 (lower is better) Translates to: VGNTLSTRLALDSHLYITGQQTP*KPQDNN Trigger: GTTATTGTCTTGTGGTTTCCAAGGAGTTTGCTGCCC...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGGGCAGCAAACTCCTTaGAAACCACAAGACAATAAC | + |
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Preference number: 2 (lower is better) Translates to: WKHTKYQAGLGLSLVYYPGQQTP*KPQDNN Trigger: GTTATTGTCTTGTGGTTTCCAAGGAGTTTGCTGCCC...TGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATCCTCACTTAAGACTCTaGAAACTCACTAGACCTCAT | + |
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Preference number: 2 (lower is better) Translates to: LSTRLALDSHLYITQCLNPHLRL*KLTRPH Trigger: ATGAGGTCTAGTGAGTTTGCAGAGTCTTAAGTGAGG...ATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACCTTCAGAGGAGAAAACAAAAATGCTCTGAGAGATGTCATTGAACTGAGGAGCACTGAAGATGCTTaGCAGAAGCTTAGAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: WTFRGENKNALRDVIELRSTEDA*QKLRRS Trigger: AGACCTTCTAAGCTTCTGCCAAGCATCTTCAGTGCT...CCTCAGTTCAATGACATCTCTCAGAGCATTTTTGTTTTCTCCTCTGAAGGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTAGAACTTTGCAGATCTCTCTCTTCTaGGACTTGAACAAGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GLGLSLVYYPVSKYFRTLQISLF*DLNKKS Trigger: GCTCTTCTTGTTCAAGTCCCAGAAGAGAGAGATCTG...CAAAGTTCTAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR CAA 90 bp | CCAGTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTaGTATATTACCCAGTGTCTAAATACTTTAGAACTTTGTATTTTT | + |
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Preference number: 2 (lower is better) Translates to: PVGNTLSTRLALDSH*YITQCLNTLELCIF Trigger: AAAAATACAAAGTTCTAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR GCA 72 bp | GGCTCGGCCCTGAAGTGCCCATGTCCCGGCTGCCCCTaGCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: GSALKCPCPGCP*LLQLRQVSRCF Trigger: AAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGCAGCCGGGACATGGGCACTTCAGGGCCGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR GCA 72 bp | CTGAGGGCCTGGAATGCTGGCGAGGAGATTGCCACCTaGCTCCTGAGTCTGAGGACAGAGGAGAAGGCAACA | + |
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Preference number: 3 (lower is better) Translates to: LRAWNAGEEIAT*LLSLRTEEKAT Trigger: TGTTGCCTTCTCCTCTGTCCTCAGACTCAGGAGGCAGGTGGCAATCTCCTCGCCAGCATTCCAGGCCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR TCA 72 bp | GAGTCTAAGGACTGGGGCTGTAGCTCAGGGACAGGATaGCTGTCTGGCACATATGAAGCCCTAGCTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ESKDWGCSSGTG*LSGTYEALALS Trigger: AGACAAAGCTAGGGCTTCATATGTGCCAGACAGTCATCCTGTCCCTGAGCTACAGCCCCAGTCCTTAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR GCA 72 bp | TGCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTaGTTTGAGAAACAAGCAATGGAATGGACTGCTTAC | + |
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Preference number: 3 (lower is better) Translates to: CPCLLQLRQVSR*FEKQAMEWTAY Trigger: GTAAGCAGTCCATTCCATTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR CAA 90 bp | GCTCTAGCCAGTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTCCTTAAAGAAGATTaGCTGAGTCTCCCACGCTGT | + |
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Preference number: 3 (lower is better) Translates to: ALASWKHTKYQAGLGLSLVLKED*LSLPRC Trigger: ACAGCGTGGGAGACTCAGCAAATCTTCTTTAAGGAC...AAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGGCTAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCTAGCCAGTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTTCTCTCTTCTGGGACTaGAACAAGAAGAGCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: ALASWKHTKYQAGLGLSLSLFWD*NKKSRK Trigger: TTTCCTGCTCTTCTTGTTCAAGTCCCAGAAGAGAGA...AAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGGCTAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR TCA 72 bp | TACAAACTATCTCCCCTGTCCTTAAAGAAGATTTGCTaGGTCTCCCACGCTGTAAGGATCTGGAGAGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: YKLSPLSLKKIC*VSHAVRIWRAG Trigger: GCCTGCTCTCCAGATCCTTACAGCGTGGGAGACTCAGCAAATCTTCTTTAAGGACAGGGGAGATAGTTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR TCA 72 bp | CTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTaGGAAACAAGCAATGGAATGGACTGCTTACATAAA | + |
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Preference number: 3 (lower is better) Translates to: LPPAAQTGISLL*ETSNGMDCLHK Trigger: TTTATGTAAGCAGTCCATTCCATTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| 3UTR-3UTR CAA 90 bp | AACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTTCTCTCTTCTGGGACTaGAACAAGAAGAGCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: NTLSTRLALDSHLYITQCSLFWD*NKKSRK Trigger: TTTCCTGCTCTTCTTGTTCAAGTCCCAGAAGAGAGA...ACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| 3UTR CCA 72 bp | TTTTTAAGTCAGTCTCACAATGAAGCTCTAGCCAGTTaGAAACACACTAAGTACCAGGCTGGCCTTGGACTC | + |
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Preference number: 3 (lower is better) Translates to: FLSQSHNEALAS*KHTKYQAGLGL Trigger: GAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGGCTAGAGCTTCATTGTGAGACTGACTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101017.9 |
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| 3UTR CCA 72 bp | GAAAGAAGCTGTAGATTCCAGGGGCAGCAAACTCCTTaGAAACCACAAGACAATAACAGATCTCTCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: ERSCRFQGQQTP*KPQDNNRSLSS Trigger: AGAAGAGAGAGATCTGTTATTGTCTTGTGGTTTCCAAGGAGTTTGCTGCCCCTGGAATCTACAGCTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGCTGGACCCAGGCACCGAGGGACGAGGCGTAGGTGTCCTGGGCTGCTGGTGCAGGCAAGGAGAGTaGAGCCTGGACCGCAGAATC | + |
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Preference number: 4 (lower is better) Translates to: TGLDPGTEGRGVGVLGCWCRQGE*SLDRRI Trigger: GATTCTGCGGTCCAGGCTTCACTCTCCTTGCCTGCA...CCAGCAGCCCAGGACACCTACGCCTCGTCCCTCGGTGCCTGGGTCCAGCCCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CCA 90 bp | ACAGGGCTGGACCCAGGCACCGAGGGACGAGGCGTAGGTGTCCTGGGCTGCTGGAGGAGGAGGAGGAGCTaGATCAAAGCCATTTACTGC | + |
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Preference number: 4 (lower is better) Translates to: TGLDPGTEGRGVGVLGCWRRRRS*IKAIYC Trigger: GCAGTAAATGGCTTTGATCCAGCTCCTCCTCCTCCT...CCAGCAGCCCAGGACACCTACGCCTCGTCCCTCGGTGCCTGGGTCCAGCCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CCA 90 bp | TGCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCACCAGAGTTGGAGAGCTaGGGGCAGACTTGCGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: CPCLLQLRQVSRCFEKQAPELES*GQTCGS Trigger: TGACCCGCAAGTCTGCCCCCAGCTCTCCAACTCTGG...TGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CCA 90 bp | GAGATTGCCACCTGCCTCCTGAGTCTGAGGACAGAGGAGAAGGCAACACAGAGGCTCACAGTCCAGAGTTaGAGAGCTGGGGGCAGACTT | + |
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Preference number: 4 (lower is better) Translates to: EIATCLLSLRTEEKATQRLTVQS*RAGGRL Trigger: AAGTCTGCCCCCAGCTCTCCAACTCTGGACTGTGAG...CCTCTGTGTTGCCTTCTCCTCTGTCCTCAGACTCAGGAGGCAGGTGGCAATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CCA 90 bp | GCTCTAGCCAGTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTCCAGAGTTGGAGAGCTaGGGGCAGACTTGCGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ALASWKHTKYQAGLGLSLPELES*GQTCGS Trigger: TGACCCGCAAGTCTGCCCCCAGCTCTCCAACTCTGG...AAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGGCTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR GCA 90 bp | GCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCAAGGATGCTTGGTCTTTTaGAAAGTTCCTGCAAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: APASCSSDRYLAALRNKQGCLVF*KVPASG Trigger: GCCGCTTGCAGGAACTTTGCAAAAGACCAAGCATCC...TTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CCA 90 bp | GCTCTAGCCAGTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTCTCACAGTCCAGAGTTaGAGAGCTGGGGGCAGACTT | + |
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Preference number: 4 (lower is better) Translates to: ALASWKHTKYQAGLGLSLLTVQS*RAGGRL Trigger: AAGTCTGCCCCCAGCTCTCCAACTCTGGACTGTGAG...AAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGGCTAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR GCA 90 bp | GCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCAAACATACTTATGCAGTTaGTCCTTAATGGCCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: APASCSSDRYLAALRNKQTYLCS*SLMARV Trigger: GACCCGGGCCATTAAGGAGCAACTGCATAAGTATGT...TTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR GCA 90 bp | GACAAACACCTAGCCAGTCTGCCCCCGAGAGCTGGCATTAGCCAGCCCCAGAATCTTTGGTTATCAGCCTaGAGGTCTCTATTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKHLASLPPRAGISQPQNLWLSA*RSLFLC Trigger: ACAAAGAAATAGAGACCTGCAGGCTGATAACCAAAG...ATTCTGGGGCTGGCTAATGCCAGCTCTCGGGGGCAGACTGGCTAGGTGTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR GCA 90 bp | GAGATTGCCACCTGCCTCCTGAGTCTGAGGACAGAGGAGAAGGCAACACAGAGGTATTGTTGCCCTTTTTaGTCGCTCCAGGTCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: EIATCLLSLRTEEKATQRYCCPF*SLQVII Trigger: AATGATGACCTGGAGCGAGCAAAAAGGGCAACAATA...CCTCTGTGTTGCCTTCTCCTCTGTCCTCAGACTCAGGAGGCAGGTGGCAATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR GCA 90 bp | GAGATTGCCACCTGCCTCCTGAGTCTGAGGACAGAGGAGAAGGCAACACAGAGGCTTTTGCAAAGTTCCTaGAAGCGGCTAACTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: EIATCLLSLRTEEKATQRLLQSS*KRLTWI Trigger: AATCCAAGTTAGCCGCTTGCAGGAACTTTGCAAAAG...CCTCTGTGTTGCCTTCTCCTCTGTCCTCAGACTCAGGAGGCAGGTGGCAATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR GCA 90 bp | GCTCTAGCCAGTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGGATGCTTGGTCTTTTaGAAAGTTCCTGCAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALASWKHTKYQAGLGLSLGCLVF*KVPASG Trigger: GCCGCTTGCAGGAACTTTGCAAAAGACCAAGCATCC...AAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGGCTAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCATCATCCCGAGCTTCCTaGAAGCTTTGCTTATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPCLLQLRQVSRCFEKQASSRAS*KLCLYF Trigger: GAAGTATAAGCAAAGCTTCCAGGAAGCTCGGGATGA...TGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR CCA 90 bp | GCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCAAAAGGAGTTAGTGGACTaGTTCCAAAGCCGTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: APASCSSDRYLAALRNKQKELVD*FQSRLV Trigger: TACCAAACGGCTTTGGAACCAGTCCACTAACTCCTT...TTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR CCA 90 bp | GCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCAATTTACTGCCCCTTTATaGAAGAAAGTTGCTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: APASCSSDRYLAALRNKQFTAPL*KKVARP Trigger: AGGGCGAGCAACTTTCTTCCATAAAGGGGCAGTAAA...TTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR TCA 90 bp | TGCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCATTAATGGCCCGGGTCTaGCTTAAATCATCTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CPCLLQLRQVSRCFEKQALMARV*LKSSSN Trigger: GTTAGAAGATGATTTAAGTCAGACCCGGGCCATTAA...TGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR TCA 90 bp | GCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACTTAAGTGCAGGCAAGGAGAGTaGAGCCTGGACCGCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: AGNLLVCVTFRTLVTSLKCRQGE*SLDRRI Trigger: GATTCTGCGGTCCAGGCTTCACTCTCCTTGCCTGCA...CTTAAGTGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATCTCACAGTCCAGAGTTaGAGAGCTGGGGGCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSTRLALDSHLYITQCLNLTVQS*RAGGRL Trigger: AAGTCTGCCCCCAGCTCTCCAACTCTGGACTGTGAG...ATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTAGCCAGTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGATTTGCGGGATGCTTaGTCTTTTGCAAAGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALASWKHTKYQAGLGLSLDLRDA*SFAKFL Trigger: CAGGAACTTTGCAAAAGACCAAGCATCCCGCAAATC...AAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGGCTAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTAGCCAGTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTTTAATGGCCCGGGTCTaGCTTAAATCATCTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALASWKHTKYQAGLGLSLLMARV*LKSSSN Trigger: GTTAGAAGATGATTTAAGTCAGACCCGGGCCATTAA...AAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGGCTAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCACATACTTATGCAGTTaGTCCTTAATGGCCCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGNTLSTRLALDSHLYITTYLCS*SLMARV Trigger: GACCCGGGCCATTAAGGAGCAACTGCATAAGTATGT...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACTTAAGACATACTTATGCAGTTaGTCCTTAATGGCCCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGNLLVCVTFRTLVTSLKTYLCS*SLMARV Trigger: GACCCGGGCCATTAAGGAGCAACTGCATAAGTATGT...CTTAAGTGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTCAACCCTTCCCAATGCAACTGGATGGACCTTCAGAGGAGAAAACAAAAATCTCTCACATACTTATaGAGTTGCTCCTTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLNPSQCNWMDLQRRKQKSLTYL*SCSLMA Trigger: GGCCATTAAGGAGCAACTGCATAAGTATGTGAGAGA...TTTTTGTTTTCTCCTCTGAAGGTCCATCCAGTTGCATTGGGAAGGGTTGAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCGAAAACTGTTTTCTGTaGCTTTCCCAACAGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGNTLSTRLALDSHLYITENCFL*LSQQAL Trigger: CAACGCCTGTTGGGAAAGGCACAGAAAACAGTTTTC...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTAGGATGCTTGGTCTTTTaGAAAGTTCCTGCAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRLALDSHLYITQCLNTLGCLVF*KVPASG Trigger: GCCGCTTGCAGGAACTTTGCAAAAGACCAAGCATCC...TAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCTCATCCCGAGCTTCCTaGAAGCTTTGCTTATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGNTLSTRLALDSHLYITSSRAS*KLCLYF Trigger: GAAGTATAAGCAAAGCTTCCAGGAAGCTCGGGATGA...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | AACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTAAGGAGTTAGTGGACTaGTTCCAAAGCCGTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTLSTRLALDSHLYITQCKELVD*FQSRLV Trigger: TACCAAACGGCTTTGGAACCAGTCCACTAACTCCTT...ACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCTGCAAGCGGCTAACTTaGATTCTAAAGCCCCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VGNTLSTRLALDSHLYITCKRLT*ILKPLL Trigger: AAGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCA...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| 3UTR CAA 72 bp | TATGTACAAACTATCTCCCCTGTCCTTAAAGAAGATTaGCTGAGTCTCCCACGCTGTAAGGATCTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVQTISPVLKED*LSLPRCKDLES Trigger: GCTCTCCAGATCCTTACAGCGTGGGAGACTCAGCAAATCTTCTTTAAGGACAGGGGAGATAGTTTGTACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCACTTTTGCAAAGTTCCTaGAAGCGGCTAACTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: WKHTKYQAGLGLSLVYYPLLQSS*KRLTWI Trigger: AATCCAAGTTAGCCGCTTGCAGGAACTTTGCAAAAG...TGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATAAGGAGTTAGTGGACTaGTTCCAAAGCCGTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSTRLALDSHLYITQCLNKELVD*FQSRLV Trigger: TACCAAACGGCTTTGGAACCAGTCCACTAACTCCTT...ATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATTGCAAGCGGCTAACTTaGATTCTAAAGCCCCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSTRLALDSHLYITQCLNCKRLT*ILKPLL Trigger: AAGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCA...ATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACTTAAGTATTGTTGCCCTTTTTaGTCGCTCCAGGTCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: AGNLLVCVTFRTLVTSLKYCCPF*SLQVII Trigger: AATGATGACCTGGAGCGAGCAAAAAGGGCAACAATA...CTTAAGTGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | TGCAACTGGATGGACCTTCAGAGGAGAAAACAAAAATGCTCTGAGAGATGTCATGAAAACTGTTTTCTGTaGCTTTCCCAACAGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CNWMDLQRRKQKCSERCHENCFL*LSQQAL Trigger: CAACGCCTGTTGGGAAAGGCACAGAAAACAGTTTTC...ATGACATCTCTCAGAGCATTTTTGTTTTCTCCTCTGAAGGTCCATCCAGTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACTTAAGCTTTTGCAAAGTTCCTaGAAGCGGCTAACTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: AGNLLVCVTFRTLVTSLKLLQSS*KRLTWI Trigger: AATCCAAGTTAGCCGCTTGCAGGAACTTTGCAAAAG...CTTAAGTGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATTCATACTTCAGTCTTTaGTTATCAGCCTGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSTRLALDSHLYITQCLNSYFSL*LSACRS Trigger: AGACCTGCAGGCTGATAACCAAAGACTGAAGTATGA...ATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | TGCAACTGGATGGACCTTCAGAGGAGAAAACAAAAATGCTCTGAGAGATGTCATTGCAAGCGGCTAACTTaGATTCTAAAGCCCCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: CNWMDLQRRKQKCSERCHCKRLT*ILKPLL Trigger: AAGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCA...ATGACATCTCTCAGAGCATTTTTGTTTTCTCCTCTGAAGGTCCATCCAGTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR CCA 90 bp | TGGACCTTCAGAGGAGAAAACAAAAATGCTCTGAGAGATGTCATTGAACTGAGGGATTTGCGGGATGCTTaGTCTTTTGCAAAGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WTFRGENKNALRDVIELRDLRDA*SFAKFL Trigger: CAGGAACTTTGCAAAAGACCAAGCATCCCGCAAATC...CCTCAGTTCAATGACATCTCTCAGAGCATTTTTGTTTTCTCCTCTGAAGGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR TCA 90 bp | ACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTATTAATGGCCCGGGTCTaGCTTAAATCATCTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TRLALDSHLYITQCLNTLLMARV*LKSSSN Trigger: GTTAGAAGATGATTTAAGTCAGACCCGGGCCATTAA...TAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATGCTTCCTGGAAGCTTTaGTTATACTTCAAGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTRLALDSHLYITQCLNASWKL*LYFKES Trigger: ACTTTCCTTGAAGTATAAGCAAAGCTTCCAGGAAGC...ATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACTTAAGGCTTCCTGGAAGCTTTaGTTATACTTCAAGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGNLLVCVTFRTLVTSLKASWKL*LYFKES Trigger: ACTTTCCTTGAAGTATAAGCAAAGCTTCCAGGAAGC...CTTAAGTGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACTTTGGTTATCAGCCTaGAGGTCTCTATTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRAGNLLVCVTFRTLVTSLWLSA*RSLFLC Trigger: ACAAAGAAATAGAGACCTGCAGGCTGATAACCAAAG...TGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGCTCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTATCTCTCACATACTTATaGAGTTGCTCCTTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRLALDSHLYITQCLNTLSLTYL*SCSLMA Trigger: GGCCATTAAGGAGCAACTGCATAAGTATGTGAGAGA...TAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTATATTGTTGCCCTTTTTaGTCGCTCCAGGTCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: TRLALDSHLYITQCLNTLYCCPF*SLQVII Trigger: AATGATGACCTGGAGCGAGCAAAAAGGGCAACAATA...TAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | TGGACCTTCAGAGGAGAAAACAAAAATGCTCTGAGAGATGTCATTGAACTGAGGTCATACTTCAGTCTTTaGTTATCAGCCTGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WTFRGENKNALRDVIELRSYFSL*LSACRS Trigger: AGACCTGCAGGCTGATAACCAAAGACTGAAGTATGA...CCTCAGTTCAATGACATCTCTCAGAGCATTTTTGTTTTCTCCTCTGAAGGTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR GCA 90 bp | TGCAACTGGATGGACCTTCAGAGGAGAAAACAAAAATGCTCTGAGAGATGTCATGCTTCCTGGAAGCTTTaGTTATACTTCAAGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CNWMDLQRRKQKCSERCHASWKL*LYFKES Trigger: ACTTTCCTTGAAGTATAAGCAAAGCTTCCAGGAAGC...ATGACATCTCTCAGAGCATTTTTGTTTTCTCCTCTGAAGGTCCATCCAGTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTAGAACTTTGTCATCCCGAGCTTCCTaGAAGCTTTGCTTATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLSLVYYPVSKYFRTLSSRAS*KLCLYF Trigger: GAAGTATAAGCAAAGCTTCCAGGAAGCTCGGGATGA...CAAAGTTCTAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTAGAACTTTGGATTTGCGGGATGCTTaGTCTTTTGCAAAGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLSLVYYPVSKYFRTLDLRDA*SFAKFL Trigger: CAGGAACTTTGCAAAAGACCAAGCATCCCGCAAATC...CAAAGTTCTAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTAGAACTTTGTCTCTCACATACTTATaGAGTTGCTCCTTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLSLVYYPVSKYFRTLSLTYL*SCSLMA Trigger: GGCCATTAAGGAGCAACTGCATAAGTATGTGAGAGA...CAAAGTTCTAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| 3UTR CAA 72 bp | AACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTaGTATATTACCCAGTGTCTAAATACTTTAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NTLSTRLALDSH*YITQCLNTLEL Trigger: AAGTTCTAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | GACAAACACCTAGCCAGTCTGCCCCCGAGAGCTGGCATTAGCCAGCCCCAGAATTTGCTCGCCCTGACCTaGGGCACTCTGGGCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: DKHLASLPPRAGISQPQNLLALT*GTLGHC Trigger: GCAATGGCCCAGAGTGCCCAAGGTCAGGGCGAGCAA...ATTCTGGGGCTGGCTAATGCCAGCTCTCGGGGGCAGACTGGCTAGGTGTTTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR CAA 90 bp | CCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCAATGTCTCACAGTCCAGAGTaGGAGAGCTGGGGGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: PCLLQLRQVSRCFEKQAMSHSPE*ESWGQT Trigger: AGTCTGCCCCCAGCTCTCCAACTCTGGACTGTGAGA...CATTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR CAA 90 bp | GAGATTGCCACCTGCCTCCTGAGTCTGAGGACAGAGGAGAAGGCAACACAGAGGGGGATGCTTGGTCTTTaGCAAAGTTCCTGCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EIATCLLSLRTEEKATQRGMLGL*QSSCKR Trigger: CCGCTTGCAGGAACTTTGCAAAAGACCAAGCATCCC...CCTCTGTGTTGCCTTCTCCTCTGTCCTCAGACTCAGGAGGCAGGTGGCAATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CAA 90 bp | TCAGAGATGTTCCTGACTCTGACAGAAACAGGCCTGAACTGCAGGGGTGAGGCTGGGCACTCTGGGCCATaGCTGTTCATTACCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SEMFLTLTETGLNCRGEAGHSGP*LFITPQ Trigger: CTGTGGGGTAATGAACAGCAATGGCCCAGAGTGCCC...AGCCTCACCCCTGCAGTTCAGGCCTGTTTCTGTCAGAGTCAGGAACATCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS TCA 90 bp | ACTGTTTTCTGTGCCTTTCCCAACAGGCGTTGCAGGCAAGGAGAGTaGAGCCTGGACCGCAGAATCCATCTTCTCACAGTCCAGAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVFCAFPNRRCRQGE*SLDRRIHLLTVQSW Trigger: CCAACTCTGGACTGTGAGAAGATGGATTCTGCGGTCCAGGCTTCACTCTCCTTGCCTGCAACGCCTGTTGGGAAAGGCACAGAAAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR CAA 90 bp | TGCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCACACATACTTATGCAGTaGCTCCTTAATGGCCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPCLLQLRQVSRCFEKQAHILMQ*LLNGPG Trigger: ACCCGGGCCATTAAGGAGCAACTGCATAAGTATGTG...TGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CAA 90 bp | CAGCCCCAGAATCAGGCCCCTCAACCCTTCCCAATGCAACTGGATGGACCTTCACCAGTGAAACTATTGTaGCCCTTTTTGCTCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QPQNQAPQPFPMQLDGPSPVKLL*PFLLAP Trigger: TGGAGCGAGCAAAAAGGGCAACAATAGTTTCACTGG...TGAAGGTCCATCCAGTTGCATTGGGAAGGGTTGAGGGGCCTGATTCTGGGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CAA 90 bp | GCCCCTGCCTCCTGCAGCTCAGACAGGTATCTCGCTGCTTTGAGAAACAAGCAACTGCAAGCGGCTAACTaGGATTCTAAAGCCCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: APASCSSDRYLAALRNKQLQAAN*DSKAPT Trigger: AGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCAG...TTGCTTGTTTCTCAAAGCAGCGAGATACCTGTCTGAGCTGCAGGAGGCAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CAA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCTTGCTCGCCCTGACCTaGGGCACTCTGGGCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGNTLSTRLALDSHLYITLLALT*GTLGHC Trigger: GCAATGGCCCAGAGTGCCCAAGGTCAGGGCGAGCAA...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR CAA 90 bp | CAGCCCCAGAATCAGGCCCCTCAACCCTTCCCAATGCAACTGGATGGACCTTCATTCATACTTCAGTCTTaGGTTATCAGCCTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPQNQAPQPFPMQLDGPSFILQS*VISLQV Trigger: GACCTGCAGGCTGATAACCAAAGACTGAAGTATGAA...TGAAGGTCCATCCAGTTGCATTGGGAAGGGTTGAGGGGCCTGATTCTGGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CAA 90 bp | AGAAGAGCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCATTGCTCGCCCTGACCTaGGGCACTCTGGGCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRAGNLLVCVTFRTLVTSLLALT*GTLGHC Trigger: GCAATGGCCCAGAGTGCCCAAGGTCAGGGCGAGCAA...TGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGCTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR CAA 90 bp | AACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTTCTCACAGTCCAGAGTaGGAGAGCTGGGGGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: NTLSTRLALDSHLYITQCSHSPE*ESWGQT Trigger: AGTCTGCCCCCAGCTCTCCAACTCTGGACTGTGAGA...ACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR CAA 90 bp | AACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTGGGCACTCTGGGCCATaGCTGTTCATTACCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: NTLSTRLALDSHLYITQCGHSGP*LFITPQ Trigger: CTGTGGGGTAATGAACAGCAATGGCCCAGAGTGCCC...ACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS TCA 90 bp | ATCAAAGCCATTTACTGCCCCTTTATGGAAGAAAGTTGCTCGCCCTaGCCTTGGGCACTCTGGGCCATTGCTGTTCATTACCCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: IKAIYCPFMEESCSP*PWALWAIAVHYPTV Trigger: AACTGTGGGGTAATGAACAGCAATGGCCCAGAGTGCCCAAGGTCAGGGCGAGCAACTTTCTTCCATAAAGGGGCAGTAAATGGCTTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR CAA 90 bp | GCTCTAGCCAGTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTCTATTGTTGCCCTTTTaGCTCGCTCCAGGTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: ALASWKHTKYQAGLGLSLLLLPF*LAPGHH Trigger: ATGATGACCTGGAGCGAGCAAAAAGGGCAACAATAG...AAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAACTGGCTAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACTTAAGTCTCACAGTCCAGAGTaGGAGAGCTGGGGGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: AGNLLVCVTFRTLVTSLKSHSPE*ESWGQT Trigger: AGTCTGCCCCCAGCTCTCCAACTCTGGACTGTGAGA...CTTAAGTGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACTTAAGGGGCACTCTGGGCCATaGCTGTTCATTACCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AGNLLVCVTFRTLVTSLKGHSGP*LFITPQ Trigger: CTGTGGGGTAATGAACAGCAATGGCCCAGAGTGCCC...CTTAAGTGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS CCA 90 bp | GCACTCTGGGCCATTGCTGTTCATTACCCCACAGTTAACGCTCCCTaGAACATAAGATTTGCGGGATGCTTGGTCTTTTGCAAAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALWAIAVHYPTVNAP*NIRFAGCLVFCKVP Trigger: AGGAACTTTGCAAAAGACCAAGCATCCCGCAAATCTTATGTTCCAGGGAGCGTTAACTGTGGGGTAATGAACAGCAATGGCCCAGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR CAA 90 bp | TGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCACACATACTTATGCAGTaGCTCCTTAATGGCCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WKHTKYQAGLGLSLVYYPHILMQ*LLNGPG Trigger: ACCCGGGCCATTAAGGAGCAACTGCATAAGTATGTG...TGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTGCAAGCGGCTAACTaGGATTCTAAAGCCCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: NTLSTRLALDSHLYITQCLQAAN*DSKAPT Trigger: AGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCAG...ACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCAGGGATGCTTGGTCTTTaGCAAAGTTCCTGCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRAGNLLVCVTFRTLVTSGMLGL*QSSCKR Trigger: CCGCTTGCAGGAACTTTGCAAAAGACCAAGCATCCC...TGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGCTCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS GCA 90 bp | CTGGAACATAAGATTTGCGGGATGCTTGGTCTTTTGCAAAGTTCCTaGAAGCGGCTAACTTGGATTCTAAAGCCCCTACTTTCCGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LEHKICGMLGLLQSS*KRLTWILKPLLSAR Trigger: TCTTGCGGAAAGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCAGGAACTTTGCAAAAGACCAAGCATCCCGCAAATCTTATGTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCAACCCTTCCCAATGCAACTGGATGGACCTTCAGAGGAGAAAACAAAAACTTCCAGTGAAACTATaGTTGCCCTTTTTGCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLNPSQCNWMDLQRRKQKLPVKL*LPFLLA Trigger: AGCGAGCAAAAAGGGCAACAATAGTTTCACTGGAAG...TTTTTGTTTTCTCCTCTGAAGGTCCATCCAGTTGCATTGGGAAGGGTTGAGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CAA 90 bp | ACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTAGGGATGCTTGGTCTTTaGCAAAGTTCCTGCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRLALDSHLYITQCLNTLGMLGL*QSSCKR Trigger: CCGCTTGCAGGAACTTTGCAAAAGACCAAGCATCCC...TAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR CAA 90 bp | TGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCATTCATACTTCAGTCTTaGGTTATCAGCCTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WKHTKYQAGLGLSLVYYPFILQS*VISLQV Trigger: GACCTGCAGGCTGATAACCAAAGACTGAAGTATGAA...TGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR CAA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCTTCATACTTCAGTCTTaGGTTATCAGCCTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGNTLSTRLALDSHLYITFILQS*VISLQV Trigger: GACCTGCAGGCTGATAACCAAAGACTGAAGTATGAA...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACTTAAGCTATTGTTGCCCTTTTaGCTCGCTCCAGGTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: AGNLLVCVTFRTLVTSLKLLLPF*LAPGHH Trigger: ATGATGACCTGGAGCGAGCAAAAAGGGCAACAATAG...CTTAAGTGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS-3UTR CAA 90 bp | AGAAGAGCAGGAAACTTATTAGTCTGTGTGACCTTCAGGACTCTGGTAACCTCACCAGTGAAACTATTGTaGCCCTTTTTGCTCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRAGNLLVCVTFRTLVTSPVKLL*PFLLAP Trigger: TGGAGCGAGCAAAAAGGGCAACAATAGTTTCACTGG...TGAGGTTACCAGAGTCCTGAAGGTCACACAGACTAATAAGTTTCCTGCTCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCTTCCAGTGAAACTATaGTTGCCCTTTTTGCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGNTLSTRLALDSHLYITLPVKL*LPFLLA Trigger: AGCGAGCAAAAAGGGCAACAATAGTTTCACTGGAAG...GGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTACTGCAAGCGGCTAACTaGGATTCTAAAGCCCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: TRLALDSHLYITQCLNTLLQAAN*DSKAPT Trigger: AGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCAG...TAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAACACACTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAAGATTTGCGGGATGCTaGGTCTTTTGCAAAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WKHTKYQAGLGLSLVYYPRFAGC*VFCKVP Trigger: AGGAACTTTGCAAAAGACCAAGCATCCCGCAAATCT...TGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAGTGTGTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | TGCAACTGGATGGACCTTCAGAGGAGAAAACAAAAATGCTCTGAGAGATGTCATCTATTGTTGCCCTTTTaGCTCGCTCCAGGTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: CNWMDLQRRKQKCSERCHLLLPF*LAPGHH Trigger: ATGATGACCTGGAGCGAGCAAAAAGGGCAACAATAG...ATGACATCTCTCAGAGCATTTTTGTTTTCTCCTCTGAAGGTCCATCCAGTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
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| CDS-3UTR CAA 90 bp | CTAAGTACCAGGCTGGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATCTTCCAGTGAAACTATaGTTGCCCTTTTTGCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSTRLALDSHLYITQCLNLPVKL*LPFLLA Trigger: AGCGAGCAAAAAGGGCAACAATAGTTTCACTGGAAG...ATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCCAGCCTGGTACTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS-3UTR CAA 90 bp | TGGACCTTCAGAGGAGAAAACAAAAATGCTCTGAGAGATGTCATTGAACTGAGGAGATTTGCGGGATGCTaGGTCTTTTGCAAAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WTFRGENKNALRDVIELRRFAGC*VFCKVP Trigger: AGGAACTTTGCAAAAGACCAAGCATCCCGCAAATCT...CCTCAGTTCAATGACATCTCTCAGAGCATTTTTGTTTTCTCCTCTGAAGGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS-3UTR CAA 90 bp | GGCCTTGGACTCTCACTTGTATATTACCCAGTGTCTAAATACTTTAGAACTTTGCCAGTGAAACTATTGTaGCCCTTTTTGCTCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLGLSLVYYPVSKYFRTLPVKLL*PFLLAP Trigger: TGGAGCGAGCAAAAAGGGCAACAATAGTTTCACTGG...CAAAGTTCTAAAGTATTTAGACACTGGGTAATATACAAGTGAGAGTCCAAGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS CAA 72 bp | CCTGGACCGCAGAATCCATCTTCTCACAGTCCAGAGTaGGAGAGCTGGGGGCAGACTTGCGGGTCACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGPQNPSSHSPE*ESWGQTCGSLP Trigger: AGGAAGTGACCCGCAAGTCTGCCCCCAGCTCTCCAACTCTGGACTGTGAGAAGATGGATTCTGCGGTCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
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| CDS CAA 90 bp | AGAGTGAAGCCTGGACCGCAGAATCCATCTTCTCACAGTCCAGAGTaGGAGAGCTGGGGGCAGACTTGCGGGTCACTTCCTGTTGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: RVKPGPQNPSSHSPE*ESWGQTCGSLPVVV Trigger: AACGACAACAGGAAGTGACCCGCAAGTCTGCCCCCAGCTCTCCAACTCTGGACTGTGAGAAGATGGATTCTGCGGTCCAGGCTTCACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS TCA 72 bp | TGTGCCTTTCCCAACAGGCGTTGCAGGCAAGGAGAGTaGAGCCTGGACCGCAGAATCCATCTTCTCACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CAFPNRRCRQGE*SLDRRIHLLTV Trigger: GACTGTGAGAAGATGGATTCTGCGGTCCAGGCTTCACTCTCCTTGCCTGCAACGCCTGTTGGGAAAGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS CAA 72 bp | CTGCCCCTTTATGGAAGAAAGTTGCTCGCCCTGACCTaGGGCACTCTGGGCCATTGCTGTTCATTACCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPLYGRKLLALT*GTLGHCCSLPH Trigger: GTGGGGTAATGAACAGCAATGGCCCAGAGTGCCCAAGGTCAGGGCGAGCAACTTTCTTCCATAAAGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS CAA 72 bp | GATCAAAGCCATTTACTGCCCCTTTATGGAAGAAAGTaGCTCGCCCTGACCTTGGGCACTCTGGGCCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: DQSHLLPLYGRK*LALTLGTLGHC Trigger: GCAATGGCCCAGAGTGCCCAAGGTCAGGGCGAGCAACTTTCTTCCATAAAGGGGCAGTAAATGGCTTTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS CAA 90 bp | GAGGAGCTGGATCAAAGCCATTTACTGCCCCTTTATGGAAGAAAGTaGCTCGCCCTGACCTTGGGCACTCTGGGCCATTGCTGTTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: EELDQSHLLPLYGRK*LALTLGTLGHCCSL Trigger: TAATGAACAGCAATGGCCCAGAGTGCCCAAGGTCAGGGCGAGCAACTTTCTTCCATAAAGGGGCAGTAAATGGCTTTGATCCAGCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018880.14 |
||
| CDS CAA 72 bp | AAGGAAAACTGTTTTCTGTGCCTTTCCCAACAGGCGTaGCAGGCAAGGAGAGTGAAGCCTGGACCGCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KENCFLCLSQQA*QARRVKPGPQN Trigger: ATTCTGCGGTCCAGGCTTCACTCTCCTTGCCTGCAACGCCTGTTGGGAAAGGCACAGAAAACAGTTTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS CCA 72 bp | GCCATTGCTGTTCATTACCCCACAGTTAACGCTCCCTaGAACATAAGATTTGCGGGATGCTTGGTCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: AIAVHYPTVNAP*NIRFAGCLVFC Trigger: GCAAAAGACCAAGCATCCCGCAAATCTTATGTTCCAGGGAGCGTTAACTGTGGGGTAATGAACAGCAATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS CCA 72 bp | CTTGGTCTTTTGCAAAGTTCCTGCAAGCGGCTAACTTaGATTCTAAAGCCCCTACTTTCCGCAAGAGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGLLQSSCKRLT*ILKPLLSARDL Trigger: GAGATCTCTTGCGGAAAGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCAGGAACTTTGCAAAAGACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS CAA 72 bp | GCTTGGTCTTTTGCAAAGTTCCTGCAAGCGGCTAACTaGGATTCTAAAGCCCCTACTTTCCGCAAGAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: AWSFAKFLQAAN*DSKAPTFRKRS Trigger: AGATCTCTTGCGGAAAGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCAGGAACTTTGCAAAAGACCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS GCA 72 bp | AAGATTTGCGGGATGCTTGGTCTTTTGCAAAGTTCCTaGAAGCGGCTAACTTGGATTCTAAAGCCCCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: KICGMLGLLQSS*KRLTWILKPLL Trigger: AAGTAGGGGCTTTAGAATCCAAGTTAGCCGCTTGCAGGAACTTTGCAAAAGACCAAGCATCCCGCAAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
||
| CDS CAA 72 bp | TCCCTGGAACATAAGATTTGCGGGATGCTTGGTCTTTaGCAAAGTTCCTGCAAGCGGCTAACTTGGATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SLEHKICGMLGL*QSSCKRLTWIL Trigger: TAGAATCCAAGTTAGCCGCTTGCAGGAACTTTGCAAAAGACCAAGCATCCCGCAAATCTTATGTTCCAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018880.14 ENSMUST00000101017.9 ENSMUST00000108672.2 |
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