Pregenerated sensors for NDE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022678Ensembl transcript IDs: ENSMUST00000023359.13, ENSMUST00000115795.9, ENSMUST00000117958.8, ENSMUST00000132316.8, ENSMUST00000149232.2
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGGGGCAGCGCTACACCCCAGAGATGAGAGACGAGCTGGCATTTaGAGAGCCTGTGCTGGTCTTTCCACATCCCGAGGGCGCGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: CGAALHPRDERRAGI*RACAGLSTSRGRVW Trigger: CCAGACGCGCCCTCGGGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGTGTAGCGCTGCCCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR TCA 90 bp | AGAGCCTGTGCTGGTCTTTCCACATCCCGAGGGCGCGTCTGGCGGTaGGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: RACAGLSTSRGRVWR*APSPALPPWLLYGV Trigger: GACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACGCGCCCTCGGGATGTGGAAAGACCAGCACAGGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR GCA 90 bp | TGCCCTGAGCCTGGCATGGGTGTCCGGGGCTTGTCTTGCTTCTGTTaGACAGCCAATTCCTGCCGCAGATCTCGGGCTTCATCCTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: CPEPGMGVRGLSCFC*TANSCRRSRASSFS Trigger: GCTGAAGGATGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAAGCCCCGGACACCCATGCCAGGCTCAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR GCA 90 bp | CTCTTGGCTTGCCCTGAGCCTGGCATGGGTGTCCGGGGCTTGTCTTaGTTCTGTTGCACAGCCAATTCCTGCCGCAGATCTCGGGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LLACPEPGMGVRGLS*FCCTANSCRRSRAS Trigger: TGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAAGCCCCGGACACCCATGCCAGGCTCAGGGCAAGCCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR CCA 90 bp | CCACACTGGTACTGCCTGGCCTTCTGTCAACACCATCTCTGTTTTTaGTTCCTCGTCCTGAGGCTGGCCCACTTGTCCGGCTTGGGGACT | + |
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Preference number: 1 (lower is better) Translates to: PHWYCLAFCQHHLCF*FLVLRLAHLSGLGT Trigger: AGTCCCCAAGCCGGACAAGTGGGCCAGCCTCAGGACGAGGAACCAAAAACAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR TCA 90 bp | CGTCTGAACATTCCTGGTGTGTTCAAACCAGAGCTAGGTCCTCGGTaGGCTACTGGAGTAGACGGTACAGAGCCTGTGGCCTGCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: RLNIPGVFKPELGPR*ATGVDGTEPVACTA Trigger: GGCTGTGCAGGCCACAGGCTCTGTACCGTCTACTCCAGTAGCTCACCGAGGACCTAGCTCTGGTTTGAACACACCAGGAATGTTCAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR TCA 90 bp | GTCCTGAGGCTGGCCCACTTGTCCGGCTTGGGGACTGATCATACATaGAGTTCCTGCATGATGCTAGCTTGGACTCCAGGGCCCCAACTT | + |
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Preference number: 1 (lower is better) Translates to: VLRLAHLSGLGTDHT*SSCMMLAWTPGPQL Trigger: AAGTTGGGGCCCTGGAGTCCAAGCTAGCATCATGCAGGAACTTCATGTATGATCAGTCCCCAAGCCGGACAAGTGGGCCAGCCTCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR TCA 90 bp | TTCTCATTGTGCACTGAAGTGTGGGGCAGCGCTACACCCCAGAGATaGGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: FSLCTEVWGSATPQR*ETSWHLQSLCWSFH Trigger: GTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGTGTAGCGCTGCCCCACACTTCAGTGCACAATGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR TCA 90 bp | TTGGTTCCTCGTCCTGAGGCTGGCCCACTTGTCCGGCTTGGGGACTaGTCATACATGAAGTTCCTGCATGATGCTAGCTTGGACTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LVPRPEAGPLVRLGD*SYMKFLHDASLDSR Trigger: CCTGGAGTCCAAGCTAGCATCATGCAGGAACTTCATGTATGATCAGTCCCCAAGCCGGACAAGTGGGCCAGCCTCAGGACGAGGAACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR GCA 90 bp | ATGGGTGTCCGGGGCTTGTCTTGCTTCTGTTGCACAGCCAATTCCTaGCGCAGATCTCGGGCTTCATCCTTCAGCCTCTGCACAGATTCT | + |
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Preference number: 1 (lower is better) Translates to: MGVRGLSCFCCTANS*RRSRASSFSLCTDS Trigger: AGAATCTGTGCAGAGGCTGAAGGATGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAAGCCCCGGACACCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR CCA 90 bp | TGGCGTCCCACTAGTGGAGCTGTCCAGACCACGTCTGAACATTCCTaGTGTGTTCAAACCAGAGCTAGGTCCTCGGTGAGCTACTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: WRPTSGAVQTTSEHS*CVQTRARSSVSYWS Trigger: ACTCCAGTAGCTCACCGAGGACCTAGCTCTGGTTTGAACACACCAGGAATGTTCAGACGTGGTCTGGACAGCTCCACTAGTGGGACGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR TCA 90 bp | GCCTGGCCTTCTGTCAACACCATCTCTGTTTTTGGTTCCTCGTCCTaGGGCTGGCCCACTTGTCCGGCTTGGGGACTGATCATACATGAA | + |
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Preference number: 1 (lower is better) Translates to: AWPSVNTISVFGSSS*GWPTCPAWGLIIHE Trigger: TTCATGTATGATCAGTCCCCAAGCCGGACAAGTGGGCCAGCCTCAGGACGAGGAACCAAAAACAGAGATGGTGTTGACAGAAGGCCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR GCA 90 bp | GCACCAGGAGAATGTTCCAGAAGACAGCTTCAGCTGGAAGCAGGCTaGAGAGAGCTCCTGAGCAAAACACCTCTGGAGGCCATTAAAACT | + |
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Preference number: 1 (lower is better) Translates to: APGECSRRQLQLEAG*RELLSKTPLEAIKT Trigger: AGTTTTAATGGCCTCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGTCTTCTGGAACATTCTCCTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR GCA 90 bp | CAAACTCCAAGCGTTTTCCTGACCCTTTATCGCCCACACTGGTACTaGCTGGCCTTCTGTCAACACCATCTCTGTTTTTGGTTCCTCGTC | + |
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Preference number: 1 (lower is better) Translates to: QTPSVFLTLYRPHWY*LAFCQHHLCFWFLV Trigger: GACGAGGAACCAAAAACAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGTCAGGAAAACGCTTGGAGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR CCA 90 bp | GCTTCCCAAACTCCAAGCGTTTTCCTGACCCTTTATCGCCCACACTaGTACTGCCTGGCCTTCTGTCAACACCATCTCTGTTTTTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: ASQTPSVFLTLYRPH*YCLAFCQHHLCFWF Trigger: GAACCAAAAACAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGTCAGGAAAACGCTTGGAGTTTGGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR TCA 90 bp | ACCCTGGTTGCTCTATGGTGTCTGAATGAAGCCCAGCTGGCTGGATaGAGTTCTGTTCTTAGGGATGATGTAACAAAGGCCAGTGCAACG | + |
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Preference number: 1 (lower is better) Translates to: TLVALWCLNEAQLAG*SSVLRDDVTKASAT Trigger: CGTTGCACTGGCCTTTGTTACATCATCCCTAAGAACAGAACTTCATCCAGCCAGCTGGGCTTCATTCAGACACCATAGAGCAACCAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR GCA 90 bp | AATAAGTTAGTAGCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTaGTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCGCTACACCCC | + |
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Preference number: 1 (lower is better) Translates to: NKLVASEGCQALVLV*FSHCALKCGAALHP Trigger: GGGGTGTAGCGCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGCTACTAACTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR TCA 90 bp | GCCACCACCACCAGCCGTAGTCAGTTTAGGCTACACGGCACAAAGTaGACGCTGGTGATACTGGCTCTTATTTCTCAAACTACCTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: ATTTSRSQFRLHGTK*TLVILALISQTTLK Trigger: TTTCAAGGTAGTTTGAGAAATAAGAGCCAGTATCACCAGCGTTCACTTTGTGCCGTGTAGCCTAAACTGACTACGGCTGGTGGTGGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR CCA 90 bp | AGACAGAGCAAACCATATTTAATGGATGAGACAGCAGTACCCCAGTaGCTAGCACAGGGCCCCCAAGGTTCTAAGAGTGAAAGTCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RQSKPYLMDETAVPQ*LAQGPQGSKSESQE Trigger: CTCTTGACTTTCACTCTTAGAACCTTGGGGGCCCTGTGCTAGCCACTGGGGTACTGCTGTCTCATCCATTAAATATGGTTTGCTCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115795.9 |
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| 3UTR GCA 90 bp | AACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTaGCCTCAAGCGAGAAGCTTATTCAAGGCCAGCCTGGGCTACAGA | + |
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Preference number: 1 (lower is better) Translates to: NSLLVFLPKFRHHRI*PQARSLFKASLGYR Trigger: TCTGTAGCCCAGGCTGGCCTTGAATAAGCTTCTCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
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| 3UTR GCA 90 bp | CACAGCGCAAACACCATTACATACACAACTCTCTACTTGTCTTCCTaGCCAAATTCAGACATCATCGTATTTGCCCTCAAGCGAGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: HSANTITYTTLYLSS*PNSDIIVFALKREA Trigger: AGCTTCTCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGTTGTGTATGTAATGGTGTTTGCGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGGTGTGAGTGGCGTCCCACTAGTGGAGCTGTCCAGACCACGTCTGAACCCTCTTGGCTTGCCCTaGGCCTGGCATGGGTGTCCG | + |
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Preference number: 2 (lower is better) Translates to: AAGVSGVPLVELSRPRLNPLGLP*AWHGCP Trigger: CGGACACCCATGCCAGGCTCAGGGCAAGCCAAGAGG...GTTCAGACGTGGTCTGGACAGCTCCACTAGTGGGACGCCACTCACACCTGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGCCTGTGCTGGTCTTTCCACATCCCGAGGGCGCGTCTGGCGGTGAGCTCTTGCAGAGCCTGTGCTaGTCTTTCCACATCCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: AEPVLVFPHPEGASGGELLQSLC*SFHIPR Trigger: CCTCGGGATGTGGAAAGACCAGCACAGGCTCTGCAA...GAGCTCACCGCCAGACGCGCCCTCGGGATGTGGAAAGACCAGCACAGGCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCCTGTGCTGGTCTTTCCACATCCCGAGGGCGCGTCTGGCGGTGAGCTCTTTCTCATTGTGCACTaGAGTGTGGGGCAGCGCTAC | + |
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Preference number: 2 (lower is better) Translates to: AEPVLVFPHPEGASGGELFLIVH*SVGQRY Trigger: GTAGCGCTGCCCCACACTTCAGTGCACAATGAGAAA...GAGCTCACCGCCAGACGCGCCCTCGGGATGTGGAAAGACCAGCACAGGCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR CAA 90 bp | CCCACACTGGTACTGCCTGGCCTTCTGTCAACACCATCTCTGTTTTaGGTTCCTCGTCCTGAGGCTGGCCCACTTGTCCGGCTTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PTLVLPGLLSTPSLF*VPRPEAGPLVRLGD Trigger: GTCCCCAAGCCGGACAAGTGGGCCAGCCTCAGGACGAGGAACCAAAAACAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCCTGTGCTGGTCTTTCCACATCCCGAGGGCGCGTCTGGCGGTGAGCTCCAAAGTGAACGCTGGTaGTACTGGCTCTTATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: AEPVLVFPHPEGASGGELQSERW*YWLLFL Trigger: GAGAAATAAGAGCCAGTATCACCAGCGTTCACTTTG...GAGCTCACCGCCAGACGCGCCCTCGGGATGTGGAAAGACCAGCACAGGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | CGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTCCAAGCGTTTTCCTaGCCCTTTATCGCCCACACT | + |
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Preference number: 2 (lower is better) Translates to: RLAVSSISGFTTLVALWCLQAFS*PFIAHT Trigger: AGTGTGGGCGATAAAGGGTCAGGAAAACGCTTGGAG...ACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCCTGTGCTGGTCTTTCCACATCCCGAGGGCGCGTCTGGCGGTGAGCTCGTCCTAGATACAATTTaGTCATGCTGTAAAAGCACC | + |
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Preference number: 2 (lower is better) Translates to: AEPVLVFPHPEGASGGELVLDTI*SCCKST Trigger: GGTGCTTTTACAGCATGATCAAATTGTATCTAGGAC...GAGCTCACCGCCAGACGCGCCCTCGGGATGTGGAAAGACCAGCACAGGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | GGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGAAAGGATAGTCTCCCACTaGCTTAAGAGGCAGACAGCG | + |
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Preference number: 2 (lower is better) Translates to: GGELHLRLYHPGCSMVSERIVSH*LKRQTA Trigger: CGCTGTCTGCCTCTTAAGTCAGTGGGAGACTATCCT...TTCAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR GCA 90 bp | GACCCTTTATCGCCCACACTGGTACTGCCTGGCCTTCTGTCAACACCATCTCTGCAGCTGGAAGCAGGCTaGAGAGAGCTCCTGAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: DPLSPTLVLPGLLSTPSLQLEAG*RELLSK Trigger: TTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTG...CAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR-3UTR GCA 90 bp | CGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTGTGCTTTTCTCATTGTaGACTGAAGTGTGGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RLAVSSISGFTTLVALWCVLFSL*TEVWGS Trigger: GCTGCCCCACACTTCAGTGCACAATGAGAAAAGCAC...ACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | GACCCTTTATCGCCCACACTGGTACTGCCTGGCCTTCTGTCAACACCATCTCTGCTACACGGCACAAAGTaGACGCTGGTGATACTGGCT | + |
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Preference number: 2 (lower is better) Translates to: DPLSPTLVLPGLLSTPSLLHGTK*TLVILA Trigger: AGCCAGTATCACCAGCGTTCACTTTGTGCCGTGTAG...CAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCAGCCCAGCTGGCTGGATaGAGTTCTGTTCTTAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TPEMRDELAFAEPVLVFPAQLAG*SSVLRD Trigger: ATCCCTAAGAACAGAACTTCATCCAGCCAGCTGGGC...TGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCAGAAGACAGCTTCAGCTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAATGCACAGCCAATTCCTaGCGCAGATCTCGGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: CSRRQLQLEAGCRELLSKCTANS*RRSRAS Trigger: TGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCA...TTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGTCTTCTGGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAAACACCTCTGGAGGCCATTAAACTACACGGCACAAAGTaGACGCTGGTGATACTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LEAGCRELLSKTPLEAIKLHGTK*TLVILA Trigger: AGCCAGTATCACCAGCGTTCACTTTGTGCCGTGTAG...TTTAATGGCCTCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGAGCAAAACACCTCTGGAGGCCATTAAAACTCTAGGAAGCCAGTGGCATGCTGCAGAGAGCTCCTaGGCAAAACACCTCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LLSKTPLEAIKTLGSQWHAAESS*AKHLWR Trigger: CCTCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGC...ATGCCACTGGCTTCCTAGAGTTTTAATGGCCTCCAGAGGTGTTTTGCTCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCGGCTGCAGAGAGCTCCTaGGCAAAACACCTCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QALVLVCFSHCALKCGAAAAESS*AKHLWR Trigger: CCTCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGC...CGCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGGCTGCAGAGAGCTCCTaGGCAAAACACCTCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ASEGCQALVLVCFSHCALAAESS*AKHLWR Trigger: CCTCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGC...CAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAAACACCTCTGGAGGCCATTAAATCTATGGTGTCTGAATaGAGCCCAGCTGGCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: LEAGCRELLSKTPLEAIKSMVSE*SPAGWM Trigger: CATCCAGCCAGCTGGGCTTCATTCAGACACCATAGA...TTTAATGGCCTCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCCAGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCTGTAACAAAGGCCAGTaGAACGCAAGTTGTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: HPRDERRAGICRACAGLSCNKGQ*NASCPV Trigger: CACTGGACAACTTGCGTTGCACTGGCCTTTGTTACA...GGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCAACTTCATGGCCCTGTaGACAGACATGAAAGGACGC | + |
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Preference number: 2 (lower is better) Translates to: RDERRAGICRACAGLSTSNFMAL*TDMKGR Trigger: GCGTCCTTTCATGTCTGTGCACAGGGCCATGAAGTT...GGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGAGCTAGGTCCTCGGTGAGCTACTGGAGTAGACGGTACAGAGCCTGTGGCTCATCCTTCAGCCTCTaGACAGATTCTAGAAGATTC | + |
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Preference number: 2 (lower is better) Translates to: TRARSSVSYWSRRYRACGSSFSL*TDSRRF Trigger: GAATCTTCTAGAATCTGTGCAGAGGCTGAAGGATGA...GCCACAGGCTCTGTACCGTCTACTCCAGTAGCTCACCGAGGACCTAGCTCTGGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTTCAGCTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAAACACCTCTGGAACTCTAGGAAGCCAGTaGCATCATACGTTAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: TASAGSRLQRAPEQNTSGTLGSQ*HHTLEL Trigger: CAGCTCTAACGTATGATGCCACTGGCTTCCTAGAGT...TCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGGAAGACAGCTTCAGCTaGAAGCAGGCTGCAGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: ASEGCQALVLVCFSHCALEDSFS*KQAAES Trigger: GCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGTCTTC...CAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACCATGTCTGTCCTCTTaGCTTGCCCTGAGCCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VASEGCQALVLVCFSHCAPCLSS*LALSLA Trigger: TGCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGG...TGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR-3UTR TCA 90 bp | CGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTGTCCTAGATACAATTTaGTCATGCTGTAAAAGCACC | + |
|
Preference number: 2 (lower is better) Translates to: RLAVSSISGFTTLVALWCVLDTI*SCCKST Trigger: GGTGCTTTTACAGCATGATCAAATTGTATCTAGGAC...ACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGGCCCAGCTGGCTGGATaGAGTTCTGTTCTTAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ASEGCQALVLVCFSHCALAQLAG*SSVLRD Trigger: ATCCCTAAGAACAGAACTTCATCCAGCCAGCTGGGC...CAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCGCTACAGTTAGAGCTGCCTTGTaGGGGGTGTCTGTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SGISVLFSLCTEVWGSATVRAAL*GVSVCV Trigger: CACACACACAGACACCCCGCACAAGGCAGCTCTAAC...TGTAGCGCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACAGCTGGAAGCAGGCTaGAGAGAGCTCCTGAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VASEGCQALVLVCFSHCAQLEAG*RELLSK Trigger: TTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTG...TGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGCCCTGTGCACAGACATGAAAGGACGCACATCTATTGAGCAGGGATTTCTTCAGCTGGAAGCAGGCTaGAGAGAGCTCCTGAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: MALCTDMKGRTSIEQGFLQLEAG*RELLSK Trigger: TTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTG...AAGAAATCCCTGCTCAATAGATGTGCGTCCTTTCATGTCTGTGCACAGGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCAGACGAGCTGGCATTTaGAGAGCCTGTGCTGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PSSGISVLFSLCTEVWGSRRAGI*RACAGL Trigger: AAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCT...GCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| 3UTR-3UTR CCA 90 bp | ACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATCGATAGAGGAACAGCAGTACCCCAGTaGCTAGCACAGGGCCCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TSGKGSQEKQESGFIDRGTAVPQ*LAQGPQ Trigger: TTGGGGGCCCTGTGCTAGCCACTGGGGTACTGCTGT...TCCTCTATCGATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000115795.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCGCTACAGCCCAGCTGGCTGGATaGAGTTCTGTTCTTAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SGISVLFSLCTEVWGSATAQLAG*SSVLRD Trigger: ATCCCTAAGAACAGAACTTCATCCAGCCAGCTGGGC...TGTAGCGCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAGCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCATTTCTCATTGTGCACTaGAGTGTGGGGCAGCGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: VASEGCQALVLVCFSHCAFLIVH*SVGQRY Trigger: GTAGCGCTGCCCCACACTTCAGTGCACAATGAGAAA...TGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGCCACCCCAACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTTTGTCTTGCTTCTGTTaGACAGCCAATTCCTGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: HATPTSGKGSQEKQESGFLSCFC*TANSCR Trigger: GCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAA...AAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGTTGGGGTGGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCCTGTGCACAGACATGAAAGGACGCACATCTATTGAGCAGGGATTTCTTTTGCTTTATCGCCCACACTaGTACTGCCTGGCCTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ALCTDMKGRTSIEQGFLLLYRPH*YCLAFC Trigger: ACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAG...CAAAAGAAATCCCTGCTCAATAGATGTGCGTCCTTTCATGTCTGTGCACAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR CAA 90 bp | CAACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTaGCCCTCAAGCGAGAAGCTTATTCAAGGCCAGCCTGGGCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: QLSTCLPAQIQTSSY*PSSEKLIQGQPGLQ Trigger: CTGTAGCCCAGGCTGGCCTTGAATAAGCTTCTCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCCTGTGCACAGACATGAAAGGACGCACATCTATTGAGCAGGGATTTCTTTTGGTGCTTTTCTCATTGTaGACTGAAGTGTGGGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ALCTDMKGRTSIEQGFLLVLFSL*TEVWGS Trigger: GCTGCCCCACACTTCAGTGCACAATGAGAAAAGCAC...CAAAAGAAATCCCTGCTCAATAGATGTGCGTCCTTTCATGTCTGTGCACAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCGCTACAACTCTAGGAAGCCAGTaGCATCATACGTTAGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SGISVLFSLCTEVWGSATTLGSQ*HHTLEL Trigger: CAGCTCTAACGTATGATGCCACTGGCTTCCTAGAGT...TGTAGCGCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGCCCTGTGCACAGACATGAAAGGACGCACATCTATTGAGCAGGGATTTCTTAGGACGCACATCTATTaGGCAGGGATTTCTTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: MALCTDMKGRTSIEQGFLRTHIY*AGISFG Trigger: ACCAAAAGAAATCCCTGCTCAATAGATGTGCGTCCT...AAGAAATCCCTGCTCAATAGATGTGCGTCCTTTCATGTCTGTGCACAGGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATCGATAGAGGATAGTCTCAACTTCATGGCCCTGTaGACAGACATGAAAGGACGC | + |
|
Preference number: 2 (lower is better) Translates to: GRDLKKNRSQGLSIEDSLNFMAL*TDMKGR Trigger: GCGTCCTTTCATGTCTGTGCACAGGGCCATGAAGTT...GAGACTATCCTCTATCGATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTACTTGGTTAAAAACAAACTTCATGGCCCTGTGCACAGACATGAAAGGACGGAAGACAGCTTCAGCTaGAAGCAGGCTGCAGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: YYLVKNKLHGPVHRHERTEDSFS*KQAAES Trigger: GCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGTCTTC...CGTCCTTTCATGTCTGTGCACAGGGCCATGAAGTTTGTTTTTAACCAAGTAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTCTCCAAGCGTTTTCCTaGCCTTCAGACAGAGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ASSLKSPCNVSSTRKVLGLQAFS*PSDRAN Trigger: GTTTGCTCTGTCTGAAGGTCAGGAAAACGCTTGGAG...ACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115795.9 |
||
| 3UTR-3UTR CCA 90 bp | TATTACTTGGTTAAAAACAAACTTCATGGCCCTGTGCACAGACATGAAAGGACGCACACTGGTACTGCCTaGCCTTCTGTCAACACCATC | + |
|
Preference number: 2 (lower is better) Translates to: YYLVKNKLHGPVHRHERTHTGTA*PSVNTI Trigger: GATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTG...CGTCCTTTCATGTCTGTGCACAGGGCCATGAAGTTTGTTTTTAACCAAGTAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAATAGCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTTCTATGGTGTCTGAATaGAGCCCAGCTGGCTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: QIASSLKSPCNVSSTRKVSMVSE*SPAGWM Trigger: CATCCAGCCAGCTGGGCTTCATTCAGACACCATAGA...AACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGCTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTCCAACTCTACTACACGGCACAAAGTaGACGCTGGTGATACTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LKSPCNVSSTRKVLGPTLLHGTK*TLVILA Trigger: AGCCAGTATCACCAGCGTTCACTTTGTGCCGTGTAG...TAGAGTTGGACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGAAGGCTAAGGTTTGCTaGAATAATCCTACAGCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: TLYLSSCPNSDIIVFALKKAKVC*NNPTAL Trigger: TAAGGCTGTAGGATTATTTCAGCAAACCTTAGCCTT...CTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAATAGCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCAAAGTGAACGCTGGTaGTACTGGCTCTTATTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QIASSLKSPCNVSSTRKVQSERW*YWLLFL Trigger: GAGAAATAAGAGCCAGTATCACCAGCGTTCACTTTG...AACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGCTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAATAGCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTGTCCTAGATACAATTTaGTCATGCTGTAAAAGCACC | + |
|
Preference number: 2 (lower is better) Translates to: QIASSLKSPCNVSSTRKVVLDTI*SCCKST Trigger: GGTGCTTTTACAGCATGATCAAATTGTATCTAGGAC...AACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGCTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGAGCTAGGTCCTCGGTGAGCTACTGGAGTAGACGGTACAGAGCCTGTGGCGCCATGTCTGTCCTCTaGGCTTGCCCTGAGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TRARSSVSYWSRRYRACGAMSVL*ACPEPG Trigger: GCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGGC...GCCACAGGCTCTGTACCGTCTACTCCAGTAGCTCACCGAGGACCTAGCTCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR TCA 72 bp | TGCACTGAAGTGTGGGGCAGCGCTACACCCCAGAGATaGGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CTEVWGSATPQR*ETSWHLQSLCW Trigger: CCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGTGTAGCGCTGCCCCACACTTCAGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| 3UTR GCA 72 bp | GCGCTACACCCCAGAGATGAGAGACGAGCTGGCATTTaGAGAGCCTGTGCTGGTCTTTCCACATCCCGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALHPRDERRAGI*RACAGLSTSRG Trigger: CCCTCGGGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGTGTAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| 3UTR GCA 72 bp | CCTGGCATGGGTGTCCGGGGCTTGTCTTGCTTCTGTTaGACAGCCAATTCCTGCCGCAGATCTCGGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PGMGVRGLSCFC*TANSCRRSRAS Trigger: TGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAAGCCCCGGACACCCATGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR GCA 72 bp | TGCCCTGAGCCTGGCATGGGTGTCCGGGGCTTGTCTTaGTTCTGTTGCACAGCCAATTCCTGCCGCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: CPEPGMGVRGLS*FCCTANSCRRS Trigger: AGATCTGCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAAGCCCCGGACACCCATGCCAGGCTCAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCAGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCCTGCATGATGCTAGCTaGGACTCCAGGGCCCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: HPRDERRAGICRACAGLSLHDAS*DSRAPT Trigger: AGTTGGGGCCCTGGAGTCCAAGCTAGCATCATGCAG...GGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR TCA 72 bp | GAGGGCGCAGTTCTCATTGGTCCTAAAGCAAAAGCTTaGCCACACCCTGGGCGGATGGTAGCGCTGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: EGAVLIGPKAKA*PHPGRMVALVM Trigger: CATCACCAGCGCTACCATCCGCCCAGGGTGTGGTCAAGCTTTTGCTTTAGGACCAATGAGAACTGCGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR CCA 72 bp | TGTGTTCAAACCAGAGCTAGGTCCTCGGTGAGCTACTaGAGTAGACGGTACAGAGCCTGTGGCCTGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: CVQTRARSSVSY*SRRYRACGLHS Trigger: GCTGTGCAGGCCACAGGCTCTGTACCGTCTACTCCAGTAGCTCACCGAGGACCTAGCTCTGGTTTGAACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR TCA 72 bp | CTGGCCCACTTGTCCGGCTTGGGGACTGATCATACATaGAGTTCCTGCATGATGCTAGCTTGGACTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LAHLSGLGTDHT*SSCMMLAWTPG Trigger: CCCTGGAGTCCAAGCTAGCATCATGCAGGAACTTCATGTATGATCAGTCCCCAAGCCGGACAAGTGGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR TCA 72 bp | TCTGTCAACACCATCTCTGTTTTTGGTTCCTCGTCCTaGGGCTGGCCCACTTGTCCGGCTTGGGGACTGATC | + |
|
Preference number: 3 (lower is better) Translates to: SVNTISVFGSSS*GWPTCPAWGLI Trigger: GATCAGTCCCCAAGCCGGACAAGTGGGCCAGCCTCAGGACGAGGAACCAAAAACAGAGATGGTGTTGACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR GCA 72 bp | GAATGTTCCAGAAGACAGCTTCAGCTGGAAGCAGGCTaGAGAGAGCTCCTGAGCAAAACACCTCTGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ECSRRQLQLEAG*RELLSKTPLEA Trigger: GGCCTCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGTCTTCTGGAACATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR CCA 72 bp | ACTAGTGGAGCTGTCCAGACCACGTCTGAACATTCCTaGTGTGTTCAAACCAGAGCTAGGTCCTCGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TSGAVQTTSEHS*CVQTRARSSVS Trigger: GCTCACCGAGGACCTAGCTCTGGTTTGAACACACCAGGAATGTTCAGACGTGGTCTGGACAGCTCCACTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR CCA 72 bp | ACACCTCTGGAGGCCATTAAAACTCTAGGAAGCCAGTaGCATCATACGTTAGAGCTGCCTTGTGCGGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TPLEAIKTLGSQ*HHTLELPCAGC Trigger: ACACCCCGCACAAGGCAGCTCTAACGTATGATGCCACTGGCTTCCTAGAGTTTTAATGGCCTCCAGAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR CCA 72 bp | ACTCCAAGCGTTTTCCTGACCCTTTATCGCCCACACTaGTACTGCCTGGCCTTCTGTCAACACCATCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TPSVFLTLYRPH*YCLAFCQHHLC Trigger: ACAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGTCAGGAAAACGCTTGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACATGCCACCCCAACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGAGTGTGCTTTTCTCATaGTGCACTGAAGTGTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AHATPTSGKGSQEKQESGSVLFS*CTEVWG Trigger: GCCCCACACTTCAGTGCACAATGAGAAAAGCACACT...CCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGTTGGGGTGGCATGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATCGATAGAGGATAGTCTCGAGACGAGCTGGCATTaGCAGAGCCTGTGCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GRDLKKNRSQGLSIEDSLETSWH*QSLCWS Trigger: AGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTC...GAGACTATCCTCTATCGATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR TCA 72 bp | GCTCTATGGTGTCTGAATGAAGCCCAGCTGGCTGGATaGAGTTCTGTTCTTAGGGATGATGTAACAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALWCLNEAQLAG*SSVLRDDVTKA Trigger: GGCCTTTGTTACATCATCCCTAAGAACAGAACTTCATCCAGCCAGCTGGGCTTCATTCAGACACCATAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| 3UTR CCA 72 bp | AAACCATATTTAATGGATGAGACAGCAGTACCCCAGTaGCTAGCACAGGGCCCCCAAGGTTCTAAGAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KPYLMDETAVPQ*LAQGPQGSKSE Trigger: TTCACTCTTAGAACCTTGGGGGCCCTGTGCTAGCCACTGGGGTACTGCTGTCTCATCCATTAAATATGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115795.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAATAGCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTGAGACGAGCTGGCATTaGCAGAGCCTGTGCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QIASSLKSPCNVSSTRKVETSWH*QSLCWS Trigger: AGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTC...AACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGCTATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| 3UTR TCA 72 bp | ACCAGCCGTAGTCAGTTTAGGCTACACGGCACAAAGTaGACGCTGGTGATACTGGCTCTTATTTCTCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: TSRSQFRLHGTK*TLVILALISQT Trigger: AGTTTGAGAAATAAGAGCCAGTATCACCAGCGTTCACTTTGTGCCGTGTAGCCTAAACTGACTACGGCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR TCA 72 bp | TTTTGCCTCTGTAATCTCCCAGTCCTAGATACAATTTaGTCATGCTGTAAAAGCACCAGGAGAATGTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FCLCNLPVLDTI*SCCKSTRRMFQ Trigger: CTGGAACATTCTCCTGGTGCTTTTACAGCATGATCAAATTGTATCTAGGACTGGGAGATTACAGAGGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| 3UTR GCA 72 bp | TTTATTACTTGGTTAAAAACAAACTTCATGGCCCTGTaGACAGACATGAAAGGACGCACATCTATTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FITWLKTNFMAL*TDMKGRTSIEQ Trigger: CTGCTCAATAGATGTGCGTCCTTTCATGTCTGTGCACAGGGCCATGAAGTTTGTTTTTAACCAAGTAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCCTGTGCTGGTCTTTCCACATCCCGAGGGCGCGTCTGGCGGTGAGCTCTGCATGATGCTAGCTTaGACTCCAGGGCCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: AEPVLVFPHPEGASGGELCMMLA*TPGPQL Trigger: AAGTTGGGGCCCTGGAGTCCAAGCTAGCATCATGCA...GAGCTCACCGCCAGACGCGCCCTCGGGATGTGGAAAGACCAGCACAGGCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | CATCCCGAGGGCGCGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTCACACTGGTACTGCCTaGCCTTCTGTCAACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: HPEGASGGELHLRLYHPGHTGTA*PSVNTI Trigger: GATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTG...ACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACGCGCCCTCGGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| 3UTR CAA 72 bp | GCCTGGCATGGGTGTCCGGGGCTTGTCTTGCTTCTGTaGCACAGCCAATTCCTGCCGCAGATCTCGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AWHGCPGLVLLL*HSQFLPQISGF Trigger: GAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAAGCCCCGGACACCCATGCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| 3UTR CAA 72 bp | TTGGCTTGCCCTGAGCCTGGCATGGGTGTCCGGGGCTaGTCTTGCTTCTGTTGCACAGCCAATTCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LACPEPGMGVRG*SCFCCTANSCR Trigger: GCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAAGCCCCGGACACCCATGCCAGGCTCAGGGCAAGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACCTCTTGGCTTGCCCTaGGCCTGGCATGGGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TPEMRDELAFAEPVLVFPPLGLP*AWHGCP Trigger: CGGACACCCATGCCAGGCTCAGGGCAAGCCAAGAGG...TGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | CATCCCGAGGGCGCGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTCACCATCTCTGTTTTTaGTTCCTCGTCCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPEGASGGELHLRLYHPGHHLCF*FLVLRL Trigger: CAGCCTCAGGACGAGGAACCAAAAACAGAGATGGTG...ACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACGCGCCCTCGGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGTGTGAGTGGCGTCCCACTAGTGGAGCTGTCCAGACCACGTCTGAACAAGGCGGTTATTCTCTaGCAAGAGGTCCCGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSGVPLVELSRPRLNKAVIL*QEVPVP Trigger: AGGAACCGGGACCTCTTGTCAGAGAATAACCGCCTT...GTTCAGACGTGGTCTGGACAGCTCCACTAGTGGGACGCCACTCACACCTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | CGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTTGCACAGCCAATTCCTaGCGCAGATCTCGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLAVSSISGFTTLVALWCCTANS*RRSRAS Trigger: TGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCA...ACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | GGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGAATCTGTCCTCTTGGCTTaGCCTGAGCCTGGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGELHLRLYHPGCSMVSESVLLA*PEPGMG Trigger: ACCCATGCCAGGCTCAGGGCAAGCCAAGAGGACAGA...TTCAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTTCAATCTGCTGCAGCTaGGCCTCCAATTCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLAVSSISGFTTLVALWCSICCS*ASNSAS Trigger: CGAAGCTGAATTGGAGGCTCAGCTGCAGCAGATTGA...ACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | CGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCAGACTCCAGCTCCATaGGAAGGCGGTTATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLAVSSISGFTTLVALWCQTPAP*EGGYSL Trigger: CAGAGAATAACCGCCTTCGCATGGAGCTGGAGTCTG...ACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | GGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGAATGCACAGCCAATTCCTaGCGCAGATCTCGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGELHLRLYHPGCSMVSECTANS*RRSRAS Trigger: TGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCA...TTCAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCCTCTGTCCTCTTGGCTTaGCCTGAGCCTGGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EMRDELAFAEPVLVFPHPSVLLA*PEPGMG Trigger: ACCCATGCCAGGCTCAGGGCAAGCCAAGAGGACAGA...GGGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCAACAGAGCCTGTGGCCTaGACAGCCATGTCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPEMRDELAFAEPVLVFPTEPVA*TAMSVL Trigger: GAGGACAGACATGGCTGTGCAGGCCACAGGCTCTGT...TGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTCAGCTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAAACACCTCTGGACCATGTCTGTCCTCTTaGCTTGCCCTGAGCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TASAGSRLQRAPEQNTSGPCLSS*LALSLA Trigger: TGCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGG...TCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR CCA 90 bp | GTACCCCAGTGGCTAGCACAGGGCCCCCAAGGTTCTAAGAGTGAAAGTCAAGAGCCATGTCTGTCCTCTTaGCTTGCCCTGAGCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPQWLAQGPQGSKSESQEPCLSS*LALSLA Trigger: TGCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGG...CTCTTGACTTTCACTCTTAGAACCTTGGGGGCCCTGTGCTAGCCACTGGGGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115795.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGTGCATGATGCTAGCTTaGACTCCAGGGCCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LAVSSISGFTTLVALWCLCMMLA*TPGPQL Trigger: AAGTTGGGGCCCTGGAGTCCAAGCTAGCATCATGCA...CAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTTTATCGCCCACACTaGTACTGCCTGGCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLAVSSISGFTTLVALWCLYRPH*YCLAFC Trigger: ACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAG...ACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCCTGCACAGCCAATTCCTaGCGCAGATCTCGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EMRDELAFAEPVLVFPHPCTANS*RRSRAS Trigger: TGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCA...GGGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | AGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCTCTGTCCTCTTGGCTTaGCCTGAGCCTGGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RDERRAGICRACAGLSTSSVLLA*PEPGMG Trigger: ACCCATGCCAGGCTCAGGGCAAGCCAAGAGGACAGA...GGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCCTGTGCTGGTCTTTCCACATCCCGAGGGCGCGTCTGGCGGTGAGCTCAGGCATTTCTTTCAATaGCTTGATTCAAACGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AEPVLVFPHPEGASGGELRHFFQ*LDSNAA Trigger: AGCAGCGTTTGAATCAAGCCATTGAAAGAAATGCCT...GAGCTCACCGCCAGACGCGCCCTCGGGATGTGGAAAGACCAGCACAGGCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTCACACTGGTACTGCCTaGCCTTCTGTCAACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: SGGELHLRLYHPGCSMVSHTGTA*PSVNTI Trigger: GATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTG...AGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCAGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCCTTTATCGCCCACACTaGTACTGCCTGGCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HPRDERRAGICRACAGLSLYRPH*YCLAFC Trigger: ACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAG...GGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTTGTCCAGACCACGTCTaGACATTCCTGGTGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGELHLRLYHPGCSMVSCPDHV*TFLVCS Trigger: TGAACACACCAGGAATGTTCAGACGTGGTCTGGACA...AGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | CACCCCAGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCTGTCCAGACCACGTCTaGACATTCCTGGTGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HPRDERRAGICRACAGLSCPDHV*TFLVCS Trigger: TGAACACACCAGGAATGTTCAGACGTGGTCTGGACA...GGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCTTCAGCTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAAACACCTCTGGACTCCAAGCGTTTTCCTaGCCCTTTATCGCCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: TASAGSRLQRAPEQNTSGLQAFS*PFIAHT Trigger: AGTGTGGGCGATAAAGGGTCAGGAAAACGCTTGGAG...TCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023359.13 |
||
| CDS-3UTR TCA 90 bp | TGTTCCAGAAGACAGCTTCAGCTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAATCAATCTGCTGCAGCTaGGCCTCCAATTCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: CSRRQLQLEAGCRELLSKSICCS*ASNSAS Trigger: CGAAGCTGAATTGGAGGCTCAGCTGCAGCAGATTGA...TTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGTCTTCTGGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | GCACATGCCACCCCAACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTCAATCTGCTGCAGCTaGGCCTCCAATTCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AHATPTSGKGSQEKQESGSICCS*ASNSAS Trigger: CGAAGCTGAATTGGAGGCTCAGCTGCAGCAGATTGA...CCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGTTGGGGTGGCATGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTAGTAGCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATCCTCTTGGCTTGCCCTaGGCCTGGCATGGGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLVASEGCQALVLVCFSHPLGLP*AWHGCP Trigger: CGGACACCCATGCCAGGCTCAGGGCAAGCCAAGAGG...ATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGCTACTAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTTATTCAAGGCCAGCCTGGGCTACAGAGGGAGTCTCTGTCTCATGAAATCTGTCCTCTTGGCTTaGCCTGAGCCTGGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLFKASLGYRGSLCLMKSVLLA*PEPGMG Trigger: ACCCATGCCAGGCTCAGGGCAAGCCAAGAGGACAGA...TTTCATGAGACAGAGACTCCCTCTGTAGCCCAGGCTGGCCTTGAATAAGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR GCA 90 bp | GATGCACATGCCACCCCAACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAACAGAGCCTGTGGCCTaGACAGCCATGTCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DAHATPTSGKGSQEKQESTEPVA*TAMSVL Trigger: GAGGACAGACATGGCTGTGCAGGCCACAGGCTCTGT...TGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGTTGGGGTGGCATGTGCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGTCTGTTTGTAGGTCATaGCCAGGTCTCTCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAVSSISGFTTLVALWCLSVCRS*PGLSNS Trigger: ACTATTGGAGAGACCTGGCCATGACCTACAAACAGA...CAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCCCATGTCTGTCCTCTTaGCTTGCCCTGAGCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSSGISVLFSLCTEVWGSPCLSS*LALSLA Trigger: TGCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGG...GCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | TGCCACCCCAACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATGTCATCCTCCAAGGCTaGGATCTGCCGGTAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CHPNIREGISRKTGVRVYVILQG*DLPVTL Trigger: GAGGGTTACCGGCAGATCTCAGCCTTGGAGGATGAC...ATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGTTGGGGTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR TCA 90 bp | TACACAACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCCTCTTGGCTTGCCCTaGGCCTGGCATGGGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLYLSSCPNSDIIVFAPLGLP*AWHGCP Trigger: CGGACACCCATGCCAGGCTCAGGGCAAGCCAAGAGG...GGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGTTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CCA 90 bp | AGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCCACCATCTCTGTTTTTaGTTCCTCGTCCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDERRAGICRACAGLSTSHHLCF*FLVLRL Trigger: CAGCCTCAGGACGAGGAACCAAAAACAGAGATGGTG...GGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGAATGAACACACTGGTACTGCCTaGCCTTCTGTCAACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSSISGFTTLVALWCLNEHTGTA*PSVNTI Trigger: GATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTG...TTCATTCAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | GACCCTTTATCGCCCACACTGGTACTGCCTGGCCTTCTGTCAACACCATCTCTGTGTTTCTTCCTCCTCTaGTTCAAAGGTCTTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DPLSPTLVLPGLLSTPSLCFFLL*FKGLSR Trigger: TCGGGAAAGACCTTTGAATCAGAGGAGGAAGAAACA...CAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | GATGCACATGCCACCCCAACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAAAGGCGGTTATTCTCTaGCAAGAGGTCCCGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DAHATPTSGKGSQEKQESKAVIL*QEVPVP Trigger: AGGAACCGGGACCTCTTGTCAGAGAATAACCGCCTT...TGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGTTGGGGTGGCATGTGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCAAGGCGGTTATTCTCTaGCAAGAGGTCCCGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSGISVLFSLCTEVWGSKAVIL*QEVPVP Trigger: AGGAACCGGGACCTCTTGTCAGAGAATAACCGCCTT...GCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | CACCCCAGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCTCATCCTTCAGCCTCTaGACAGATTCTAGAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HPRDERRAGICRACAGLSSSFSL*TDSRRF Trigger: GAATCTTCTAGAATCTGTGCAGAGGCTGAAGGATGA...GGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | TCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGCGAGACAGAGCCTGTGGCCTaGACAGCCATGTCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STCLPAQIQTSSYLPSSETEPVA*TAMSVL Trigger: GAGGACAGACATGGCTGTGCAGGCCACAGGCTCTGT...CTCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CCA 90 bp | GCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGAATTCTGTTTGTAGGTCATaGCCAGGTCTCTCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVSSISGFTTLVALWCLNSVCRS*PGLSNS Trigger: ACTATTGGAGAGACCTGGCCATGACCTACAAACAGA...ATTCAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTGTTGCACAGCCAATTCCTGCCGCAGATCTCGGGCTTCATCCTTCAGCTCTGTTTGTAGGTCATaGCCAGGTCTCTCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CFCCTANSCRRSRASSFSSVCRS*PGLSNS Trigger: ACTATTGGAGAGACCTGGCCATGACCTACAAACAGA...GCTGAAGGATGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCAACAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| CDS-3UTR CCA 90 bp | TCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGCGAGCCATGTCTGTCCTCTTaGCTTGCCCTGAGCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STCLPAQIQTSSYLPSSEPCLSS*LALSLA Trigger: TGCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGG...CTCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCTGCATGATGCTAGCTTaGACTCCAGGGCCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PSSGISVLFSLCTEVWGSCMMLA*TPGPQL Trigger: AAGTTGGGGCCCTGGAGTCCAAGCTAGCATCATGCA...GCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCAAAGGCGGTTATTCTCTaGCAAGAGGTCCCGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VASEGCQALVLVCFSHCAKAVIL*QEVPVP Trigger: AGGAACCGGGACCTCTTGTCAGAGAATAACCGCCTT...TGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | CAAATAGCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCCTCTTGGCTTGCCCTaGGCCTGGCATGGGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QIASSLKSPCNVSSTRKVPLGLP*AWHGCP Trigger: CGGACACCCATGCCAGGCTCAGGGCAAGCCAAGAGG...AACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGCTATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCCTTCCTGAGTATTCTCTaGCCTCTGTTTGTAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EMRDELAFAEPVLVFPHPFLSIL*PLFVGH Trigger: ATGACCTACAAACAGAGGGCAGAGAATACTCAGGAA...GGGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | CTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGCGATGCACAGCCAATTCCTaGCGCAGATCTCGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLSSCPNSDIIVFALKRCTANS*RRSRAS Trigger: TGAAGCCCGAGATCTGCGGCAGGAATTGGCTGTGCA...TCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCGCACCATCTCTGTTTTTaGTTCCTCGTCCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QALVLVCFSHCALKCGAAHHLCF*FLVLRL Trigger: CAGCCTCAGGACGAGGAACCAAAAACAGAGATGGTG...CGCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTGTCATCCTCCAAGGCTaGGATCTGCCGGTAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSLKSPCNVSSTRKVLGVILQG*DLPVTL Trigger: GAGGGTTACCGGCAGATCTCAGCCTTGGAGGATGAC...ACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCATTTCTTTCAATGGCTTaGTTCAAACGCTGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPEMRDELAFAEPVLVFPFLSMA*FKRCSK Trigger: CTTTGAGCAGCGTTTGAATCAAGCCATTGAAAGAAA...TGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTGTGCACAGACATGAAAGGACGCACATCTATTGAGCAGGGATTTCTTTTGAGTCTTCCAGGGACATaGTTGTGGCTCTTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALCTDMKGRTSIEQGFLLSLPGT*LWLFTD Trigger: GTCTGTGAAGAGCCACAATCATGTCCCTGGAAGACT...CAAAAGAAATCCCTGCTCAATAGATGTGCGTCCTTTCATGTCTGTGCACAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAAACACCTCTGGAGGCCATTAAATTCCTGAGTATTCTCTaGCCTCTGTTTGTAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEAGCRELLSKTPLEAIKFLSIL*PLFVGH Trigger: ATGACCTACAAACAGAGGGCAGAGAATACTCAGGAA...TTTAATGGCCTCCAGAGGTGTTTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCCAGAAGACAGCTTCAGCTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAATTCCTGAGTATTCTCTaGCCTCTGTTTGTAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSRRQLQLEAGCRELLSKFLSIL*PLFVGH Trigger: ATGACCTACAAACAGAGGGCAGAGAATACTCAGGAA...TTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGTCTTCTGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCCCTGTGCACAGACATGAAAGGACGCACATCTATTGAGCAGGGATTTCTTTTGTCTTGCTTCTGTTaGACAGCCAATTCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: MALCTDMKGRTSIEQGFLLSCFC*TANSCR Trigger: GCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAA...AAGAAATCCCTGCTCAATAGATGTGCGTCCTTTCATGTCTGTGCACAGGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR TCA 90 bp | GATGCACATGCCACCCCAACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCATGTTTCTTCCTCCTCTaGTTCAAAGGTCTTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DAHATPTSGKGSQEKQESCFFLL*FKGLSR Trigger: TCGGGAAAGACCTTTGAATCAGAGGAGGAAGAAACA...TGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGTTGGGGTGGCATGTGCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | TATTACTTGGTTAAAAACAAACTTCATGGCCCTGTGCACAGACATGAAAGGACGGTCATCCTCCAAGGCTaGGATCTGCCGGTAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YYLVKNKLHGPVHRHERTVILQG*DLPVTL Trigger: GAGGGTTACCGGCAGATCTCAGCCTTGGAGGATGAC...CGTCCTTTCATGTCTGTGCACAGGGCCATGAAGTTTGTTTTTAACCAAGTAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR TCA 90 bp | AGAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCTTTCTTTCAATGGCTTaGTTCAAACGCTGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDERRAGICRACAGLSTSFLSMA*FKRCSK Trigger: CTTTGAGCAGCGTTTGAATCAAGCCATTGAAAGAAA...GGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | TCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGCGAGTGTCCAGACCACGTCTaGACATTCCTGGTGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STCLPAQIQTSSYLPSSECPDHV*TFLVCS Trigger: TGAACACACCAGGAATGTTCAGACGTGGTCTGGACA...CTCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR GCA 90 bp | GAGATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCCTCCCTAATGTATTTCTaGAGTTGGTCTTTAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EMRDELAFAEPVLVFPHPSLMYF*SWSLMA Trigger: AGCCATTAAAGACCAACTGCAGAAATACATTAGGGA...GGGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | TCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGCGAGTTGTCTTGCTTCTGTTaGACAGCCAATTCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: STCLPAQIQTSSYLPSSELSCFC*TANSCR Trigger: GCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAA...CTCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGCACACTGGTACTGCCTaGCCTTCTGTCAACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLYLSSCPNSDIIVFALKHTGTA*PSVNTI Trigger: GATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTG...CTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGCTTTATCGCCCACACTaGTACTGCCTGGCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLYLSSCPNSDIIVFALKLYRPH*YCLAFC Trigger: ACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAG...CTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR TCA 90 bp | TACACAACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCGTTGGGGCTACTGTCTaGTCTAGAGCAGCCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YTTLYLSSCPNSDIIVFAVGATV*SRAAWY Trigger: ATACCAGGCTGCTCTAGATCAGACAGTAGCCCCAAC...GGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGTTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGTCATCCTTCAGCCTCTaGACAGATTCTAGAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: ASEGCQALVLVCFSHCALSSFSL*TDSRRF Trigger: GAATCTTCTAGAATCTGTGCAGAGGCTGAAGGATGA...CAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | ACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATCGATAGAGGATTGTCTTGCTTCTGTTaGACAGCCAATTCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGKGSQEKQESGFIDRGLSCFC*TANSCR Trigger: GCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAA...TCCTCTATCGATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR GCA 90 bp | CAAATAGCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTACAGAGCCTGTGGCCTaGACAGCCATGTCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QIASSLKSPCNVSSTRKVTEPVA*TAMSVL Trigger: GAGGACAGACATGGCTGTGCAGGCCACAGGCTCTGT...AACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGCTATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAGCGCTACATCTGTTTGTAGGTCATaGCCAGGTCTCTCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGISVLFSLCTEVWGSATSVCRS*PGLSNS Trigger: ACTATTGGAGAGACCTGGCCATGACCTACAAACAGA...TGTAGCGCTGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCCAGAAGACAGCTTCAGCTGGAAGCAGGCTGCAGAGAGCTCCTGAGCAAAATGTATTTCTGCAGTTaGTCTTTAATGGCTTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSRRQLQLEAGCRELLSKMYFCS*SLMAFV Trigger: GACGAAAGCCATTAAAGACCAACTGCAGAAATACAT...TTTGCTCAGGAGCTCTCTGCAGCCTGCTTCCAGCTGAAGCTGTCTTCTGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGAATGAAAGGCATTTCTTTCAATaGCTTGATTCAAACGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSISGFTTLVALWCLNERHFFQ*LDSNAA Trigger: AGCAGCGTTTGAATCAAGCCATTGAAAGAAATGCCT...TTCATTCAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | TACACAACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCTGCATGATGCTAGCTTaGACTCCAGGGCCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: YTTLYLSSCPNSDIIVFACMMLA*TPGPQL Trigger: AAGTTGGGGCCCTGGAGTCCAAGCTAGCATCATGCA...GGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGTTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| 3UTR CAA 72 bp | ACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTaGCCCTCAAGCGAGAAGCTTATTCAAGGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCLPAQIQTSSY*PSSEKLIQGQP Trigger: AGGCTGGCCTTGAATAAGCTTCTCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTTTGTCTTGCTTCTGTTaGACAGCCAATTCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSLKSPCNVSSTRKVLGLSCFC*TANSCR Trigger: GCGGCAGGAATTGGCTGTGCAACAGAAGCAAGACAA...ACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | TACACAACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCACCATCTCTGTTTTTaGTTCCTCGTCCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLYLSSCPNSDIIVFAHHLCF*FLVLRL Trigger: CAGCCTCAGGACGAGGAACCAAAAACAGAGATGGTG...GGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGTTGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR TCA 90 bp | ACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATCGATAGAGGATGTTTCTTCCTCCTCTaGTTCAAAGGTCTTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGKGSQEKQESGFIDRGCFFLL*FKGLSR Trigger: TCGGGAAAGACCTTTGAATCAGAGGAGGAAGAAACA...TCCTCTATCGATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTAGTAGCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATCTTCCTGGAACTCTCTaGGTTCTTCCTGAGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLVASEGCQALVLVCFSHLPGTL*VLPEYS Trigger: AGAATACTCAGGAAGAACTCAGAGAGTTCCAGGAAG...ATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGCTACTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTCCATGTCCAGACCACGTCTaGACATTCCTGGTGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLKSPCNVSSTRKVLGPCPDHV*TFLVCS Trigger: TGAACACACCAGGAATGTTCAGACGTGGTCTGGACA...TGGACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAAGGCATTTCTTTCAATaGCTTGATTCAAACGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CQALVLVCFSHCALKCGARHFFQ*LDSNAA Trigger: AGCAGCGTTTGAATCAAGCCATTGAAAGAAATGCCT...TGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTCCAACTCTATCAATCTGCTGCAGCTaGGCCTCCAATTCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LKSPCNVSSTRKVLGPTLSICCS*ASNSAS Trigger: CGAAGCTGAATTGGAGGCTCAGCTGCAGCAGATTGA...TAGAGTTGGACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTGTGCACAGACATGAAAGGACGCACATCTATTGAGCAGGGATTTCTTTTGTCCCTAATGTATTTCTaGAGTTGGTCTTTAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALCTDMKGRTSIEQGFLLSLMYF*SWSLMA Trigger: AGCCATTAAAGACCAACTGCAGAAATACATTAGGGA...CAAAAGAAATCCCTGCTCAATAGATGTGCGTCCTTTCATGTCTGTGCACAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR GCA 90 bp | TGCCACCCCAACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATTCCCTAATGTATTTCTaGAGTTGGTCTTTAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CHPNIREGISRKTGVRVYSLMYF*SWSLMA Trigger: AGCCATTAAAGACCAACTGCAGAAATACATTAGGGA...ATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGTTGGGGTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTCCATGTTTCTTCCTCCTCTaGTTCAAAGGTCTTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLKSPCNVSSTRKVLGPCFFLL*FKGLSR Trigger: TCGGGAAAGACCTTTGAATCAGAGGAGGAAGAAACA...TGGACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTTTTCTTTCAATGGCTTaGTTCAAACGCTGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASSLKSPCNVSSTRKVLGFLSMA*FKRCSK Trigger: CTTTGAGCAGCGTTTGAATCAAGCCATTGAAAGAAA...ACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTCCATTCCTGAGTATTCTCTaGCCTCTGTTTGTAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLKSPCNVSSTRKVLGPFLSIL*PLFVGH Trigger: ATGACCTACAAACAGAGGGCAGAGAATACTCAGGAA...TGGACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTCCAACTCTATCATCCTTCAGCCTCTaGACAGATTCTAGAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSPCNVSSTRKVLGPTLSSFSL*TDSRRF Trigger: GAATCTTCTAGAATCTGTGCAGAGGCTGAAGGATGA...TAGAGTTGGACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | CGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGCATGATGCTAGCTaGGACTCCAGGGCCCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RLAVSSISGFTTLVALWCLHDAS*DSRAPT Trigger: AGTTGGGGCCCTGGAGTCCAAGCTAGCATCATGCAG...ACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCCGAGCTGAGGCTGGCCCACTaGTCCGGCTTGGGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MRDELAFAEPVLVFPHPELRLAH*SGLGTD Trigger: ATCAGTCCCCAAGCCGGACAAGTGGGCCAGCCTCAG...CTCGGGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS TCA 90 bp | GTGGCTCTTCACAGACTCCAGCTCCATGCGAAGGCGGTTATTCTCTaGCAAGAGGTCCCGGTTCCTGGTTTCAATCTGCTGCAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VALHRLQLHAKAVIL*QEVPVPGFNLLQLS Trigger: GCTCAGCTGCAGCAGATTGAAACCAGGAACCGGGACCTCTTGTCAGAGAATAACCGCCTTCGCATGGAGCTGGAGTCTGTGAAGAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGCTGAGGCTGGCCCACTaGTCCGGCTTGGGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASEGCQALVLVCFSHCALLRLAH*SGLGTD Trigger: ATCAGTCCCCAAGCCGGACAAGTGGGCCAGCCTCAG...CAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGCTTTCCAGGTCATCATaGGCTTGTTCCAGTTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LAVSSISGFTTLVALWCLLSRSS*ACSSSL Trigger: TAGGGAACTGGAACAAGCCAATGATGACCTGGAAAG...CAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGAATGAACTGCATGATGCTAGCTaGGACTCCAGGGCCCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: VSSISGFTTLVALWCLNELHDAS*DSRAPT Trigger: AGTTGGGGCCCTGGAGTCCAAGCTAGCATCATGCAG...TTCATTCAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTACACCATCTCTGTTTTaGGTTCCTCGTCCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGGELHLRLYHPGCSMVSTPSLF*VPRPEA Trigger: AGCCTCAGGACGAGGAACCAAAAACAGAGATGGTGT...AGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS GCA 90 bp | GTCTTCCAGGGACATGATTGTGGCTCTTCACAGACTCCAGCTCCATaGGAAGGCGGTTATTCTCTGACAAGAGGTCCCGGTTCCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VFQGHDCGSSQTPAP*EGGYSLTRGPGSWF Trigger: AAACCAGGAACCGGGACCTCTTGTCAGAGAATAACCGCCTTCGCATGGAGCTGGAGTCTGTGAAGAGCCACAATCATGTCCCTGGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| CDS-3UTR CAA 90 bp | CGTCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCAGGTCATCATTGGCTaGTTCCAGTTCCCTAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLAVSSISGFTTLVALWCQVIIG*FQFPNV Trigger: TACATTAGGGAACTGGAACAAGCCAATGATGACCTG...ACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | GCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTGAATACACCATCTCTGTTTTaGGTTCCTCGTCCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVSSISGFTTLVALWCLNTPSLF*VPRPEA Trigger: AGCCTCAGGACGAGGAACCAAAAACAGAGATGGTGT...ATTCAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS CCA 90 bp | GCTCCATGCGAAGGCGGTTATTCTCTGACAAGAGGTCCCGGTTCCTaGTTTCAATCTGCTGCAGCTGAGCCTCCAATTCAGCTTCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: APCEGGYSLTRGPGS*FQSAAAEPPIQLRI Trigger: AATACGAAGCTGAATTGGAGGCTCAGCTGCAGCAGATTGAAACCAGGAACCGGGACCTCTTGTCAGAGAATAACCGCCTTCGCATGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGAGACGAGCTGGCATTTGCAGAGCCTGTGCTGGTCTTTCCACATCCCGAGCTTTCCAGGTCATCATaGGCTTGTTCCAGTTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: MRDELAFAEPVLVFPHPELSRSS*ACSSSL Trigger: TAGGGAACTGGAACAAGCCAATGATGACCTGGAAAG...CTCGGGATGTGGAAAGACCAGCACAGGCTCTGCAAATGCCAGCTCGTCTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | ACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATCGATAGAGGAGCCATGTCTGTCCTCTaGGCTTGCCCTGAGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSGKGSQEKQESGFIDRGAMSVL*ACPEPG Trigger: GCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGGC...TCCTCTATCGATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATCGATAGAGGATAGTCTCGCCATGTCTGTCCTCTaGGCTTGCCCTGAGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRDLKKNRSQGLSIEDSLAMSVL*ACPEPG Trigger: GCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGGC...GAGACTATCCTCTATCGATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR CAA 90 bp | ACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGGCCATGTCTGTCCTCTaGGCTTGCCCTGAGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLYLSSCPNSDIIVFALKAMSVL*ACPEPG Trigger: GCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGGC...CTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTAGTAGCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATCTGAGGCTGGCCCACTaGTCCGGCTTGGGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLVASEGCQALVLVCFSHLRLAH*SGLGTD Trigger: ATCAGTCCCCAAGCCGGACAAGTGGGCCAGCCTCAG...ATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGCTACTAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGCTGAGGCTGGCCCACTaGTCCGGCTTGGGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TLYLSSCPNSDIIVFALKLRLAH*SGLGTD Trigger: ATCAGTCCCCAAGCCGGACAAGTGGGCCAGCCTCAG...CTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTGCCATGTCTGTCCTCTaGGCTTGCCCTGAGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSLKSPCNVSSTRKVLGAMSVL*ACPEPG Trigger: GCCAGGCTCAGGGCAAGCCAAGAGGACAGACATGGC...ACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | CTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCCTCAAGCGACTGCATGATGCTAGCTaGGACTCCAGGGCCCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: LYLSSCPNSDIIVFALKRLHDAS*DSRAPT Trigger: AGTTGGGGCCCTGGAGTCCAAGCTAGCATCATGCAG...TCGCTTGAGGGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS GCA 90 bp | CAGAGAGTATCAAAGGTACTGACCCTTTATCGCCCACACTGGTACTaGCTGGCCTTCTGTCAACACCATCTCTGTTTTTGGTTCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QRVSKVLTLYRPHWY*LAFCQHHLCFWFLV Trigger: GACGAGGAACCAAAAACAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGTCAGTACCTTTGATACTCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTAATGTATTTCTGCAGTaGGTCTTTAATGGCTTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SGGELHLRLYHPGCSMVSNVFLQ*VFNGFR Trigger: ACGAAAGCCATTAAAGACCAACTGCAGAAATACATT...AGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGCGGTGAGCTCCATCTCCGGCTTTACCACCCTGGTTGCTCTATGGTGTCTATTTCTTTCAATGGCTaGATTCAAACGCTGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGGELHLRLYHPGCSMVSISFNG*IQTLLK Trigger: TTTGAGCAGCGTTTGAATCAAGCCATTGAAAGAAAT...AGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAGATGGAGCTCACCGCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS GCA 90 bp | CTTTCCAGGTCATCATTGGCTTGTTCCAGTTCCCTAATGTATTTCTaGAGTTGGTCTTTAATGGCTTTCGTCTGCGCCAGGTCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRSSLACSSSLMYF*SWSLMAFVCARSSS Trigger: GGAGGATGACCTGGCGCAGACGAAAGCCATTAAAGACCAACTGCAGAAATACATTAGGGAACTGGAACAAGCCAATGATGACCTGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS CCA 90 bp | AGGTCATCATTGGCTTGTTCCAGTTCCCTAATGTATTTCTGCAGTTaGTCTTTAATGGCTTTCGTCTGCGCCAGGTCATCCTCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSLACSSSLMYFCS*SLMAFVCARSSSKA Trigger: AGCCTTGGAGGATGACCTGGCGCAGACGAAAGCCATTAAAGACCAACTGCAGAAATACATTAGGGAACTGGAACAAGCCAATGATGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGTGAAGGGTGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGCAGGTCATCATTGGCTaGTTCCAGTTCCCTAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASEGCQALVLVCFSHCALQVIIG*FQFPNV Trigger: TACATTAGGGAACTGGAACAAGCCAATGATGACCTG...CAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCACCCTTCACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCCAAACTCCAAGCGTTTTCCTGACCTTCAGACAGAGCAAACCATATTTCTTTCCAGGTCATCATaGGCTTGTTCCAGTTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: GFPNSKRFPDLQTEQTIFLSRSS*ACSSSL Trigger: TAGGGAACTGGAACAAGCCAATGATGACCTGGAAAG...AAATATGGTTTGCTCTGTCTGAAGGTCAGGAAAACGCTTGGAGTTTGGGAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115795.9 |
||
| CDS-3UTR CAA 90 bp | TACACAACTCTCTACTTGTCTTCCTGCCCAAATTCAGACATCATCGTATTTGCCACACCATCTCTGTTTTaGGTTCCTCGTCCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YTTLYLSSCPNSDIIVFATPSLF*VPRPEA Trigger: AGCCTCAGGACGAGGAACCAAAAACAGAGATGGTGT...GGCAAATACGATGATGTCTGAATTTGGGCAGGAAGACAAGTAGAGAGTTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTCCAACACCATCTCTGTTTTaGGTTCCTCGTCCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLKSPCNVSSTRKVLGPTPSLF*VPRPEA Trigger: AGCCTCAGGACGAGGAACCAAAAACAGAGATGGTGT...TGGACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAAGCTCTGGTATTAGTGTGCTTTTCTCATTGTGCACTGAAGTGTGGGGCAAATGTATTTCTGCAGTaGGTCTTTAATGGCTTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CQALVLVCFSHCALKCGANVFLQ*VFNGFR Trigger: ACGAAAGCCATTAAAGACCAACTGCAGAAATACATT...TGCCCCACACTTCAGTGCACAATGAGAAAAGCACACTAATACCAGAGCTTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS-3UTR CAA 90 bp | TGCCACCCCAACATCAGGGAAGGGATCTCAAGAAAAACAGGAGTCAGGGTTTATAATGTATTTCTGCAGTaGGTCTTTAATGGCTTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CHPNIREGISRKTGVRVYNVFLQ*VFNGFR Trigger: ACGAAAGCCATTAAAGACCAACTGCAGAAATACATT...ATAAACCCTGACTCCTGTTTTTCTTGAGATCCCTTCCCTGATGTTGGGGTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCCCTGTGCACAGACATGAAAGGACGCACATCTATTGAGCAGGGATTTCTTATTTCTTTCAATGGCTaGATTCAAACGCTGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: MALCTDMKGRTSIEQGFLISFNG*IQTLLK Trigger: TTTGAGCAGCGTTTGAATCAAGCCATTGAAAGAAAT...AAGAAATCCCTGCTCAATAGATGTGCGTCCTTTCATGTCTGTGCACAGGGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTTAAAATCACCTTGTAATGTCAGTAGCACACGAAAAGTTCTAGGTCCAATTTCTTTCAATGGCTaGATTCAAACGCTGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSLKSPCNVSSTRKVLGPISFNG*IQTLLK Trigger: TTTGAGCAGCGTTTGAATCAAGCCATTGAAAGAAAT...TGGACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTGATTTTAAGCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
||
| CDS TCA 72 bp | CACAGACTCCAGCTCCATGCGAAGGCGGTTATTCTCTaGCAAGAGGTCCCGGTTCCTGGTTTCAATCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HRLQLHAKAVIL*QEVPVPGFNLL Trigger: CAGCAGATTGAAACCAGGAACCGGGACCTCTTGTCAGAGAATAACCGCCTTCGCATGGAGCTGGAGTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS GCA 72 bp | GGACATGATTGTGGCTCTTCACAGACTCCAGCTCCATaGGAAGGCGGTTATTCTCTGACAAGAGGTCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GHDCGSSQTPAP*EGGYSLTRGPG Trigger: ACCGGGACCTCTTGTCAGAGAATAACCGCCTTCGCATGGAGCTGGAGTCTGTGAAGAGCCACAATCATGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132316.8 |
||
| CDS TCA 72 bp | AAGAGGTCCCGGTTCCTGGTTTCAATCTGCTGCAGCTaGGCCTCCAATTCAGCTTCGTATTCTCGGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KRSRFLVSICCS*ASNSASYSRLP Trigger: AGGAAGCCGAGAATACGAAGCTGAATTGGAGGCTCAGCTGCAGCAGATTGAAACCAGGAACCGGGACCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS TCA 72 bp | AGCCTGGTATGTCCTGACAGAGAGTATCAAAGGTACTaGCCCTTTATCGCCCACACTGGTACTGCCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLVCPDREYQRY*PFIAHTGTAWP Trigger: AGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGTCAGTACCTTTGATACTCTCTGTCAGGACATACCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
||
| CDS CCA 72 bp | GAAGGCGGTTATTCTCTGACAAGAGGTCCCGGTTCCTaGTTTCAATCTGCTGCAGCTGAGCCTCCAATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EGGYSLTRGPGS*FQSAAAEPPIQ Trigger: CTGAATTGGAGGCTCAGCTGCAGCAGATTGAAACCAGGAACCGGGACCTCTTGTCAGAGAATAACCGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
||
| CDS CCA 72 bp | GGGAAGGGATCCTTTATCGCCCACACTGGTACTGCCTaGCCTTCTGTCAACACCATCTCTGTTTTTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GKGSFIAHTGTA*PSVNTISVFGS Trigger: GGAACCAAAAACAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGATCCCTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117958.8 |
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| CDS CCA 72 bp | AGAGTATCAAAGGTACTGACCCTTTATCGCCCACACTaGTACTGCCTGGCCTTCTGTCAACACCATCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RVSKVLTLYRPH*YCLAFCQHHLC Trigger: ACAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGTCAGTACCTTTGATACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149232.2 |
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| CDS CAA 90 bp | TCTCTGCCCTCTGTTTGTAGGTCATGGCCAGGTCTCTCCAATAGTTaGTTTCTTCCTCCTCTGATTCAAAGGTCTTTCCCGAGTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLPSVCRSWPGLSNS*FLPPLIQRSFPSPP Trigger: TGGAGGACTCGGGAAAGACCTTTGAATCAGAGGAGGAAGAAACAAACTATTGGAGAGACCTGGCCATGACCTACAAACAGAGGGCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 ENSMUST00000132316.8 |
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| CDS CAA 90 bp | CAGGTCATCATTGGCTTGTTCCAGTTCCCTAATGTATTTCTGCAGTaGGTCTTTAATGGCTTTCGTCTGCGCCAGGTCATCCTCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: QVIIGLFQFPNVFLQ*VFNGFRLRQVILQG Trigger: GCCTTGGAGGATGACCTGGCGCAGACGAAAGCCATTAAAGACCAACTGCAGAAATACATTAGGGAACTGGAACAAGCCAATGATGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
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| CDS CCA 72 bp | ATTTTCTCTCCCTTTATCGCCCACACTGGTACTGCCTaGCCTTCTGTCAACACCATCTCTGTTTTTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: IFSPFIAHTGTA*PSVNTISVFGS Trigger: GGAACCAAAAACAGAGATGGTGTTGACAGAAGGCCAGGCAGTACCAGTGTGGGCGATAAAGGGAGAGAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115795.9 |
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| CDS TCA 72 bp | CTTGATTCAAACGCTGCTCAAAGTCTTCCAGGGACATaGTTGTGGCTCGTTTGGCTCTTTCCAGGTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LDSNAAQSLPGT*LWLVWLFPGHH Trigger: ATGATGACCTGGAAAGAGCCAAACGAGCCACAATCATGTCCCTGGAAGACTTTGAGCAGCGTTTGAATCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
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| CDS CAA 90 bp | TCCAGGGACATGATTGTGGCTCGTTTGGCTCTTTCCAGGTCATCATaGGCTTGTTCCAGTTCCCTAATGTATTTCTGCAGTTGGTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: SRDMIVARLALSRSS*ACSSSLMYFCSWSL Trigger: TAAAGACCAACTGCAGAAATACATTAGGGAACTGGAACAAGCCAATGATGACCTGGAAAGAGCCAAACGAGCCACAATCATGTCCCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
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| CDS GCA 72 bp | TCATCATTGGCTTGTTCCAGTTCCCTAATGTATTTCTaGAGTTGGTCTTTAATGGCTTTCGTCTGCGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSLACSSSLMYF*SWSLMAFVCAR Trigger: CCTGGCGCAGACGAAAGCCATTAAAGACCAACTGCAGAAATACATTAGGGAACTGGAACAAGCCAATGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
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| CDS CAA 72 bp | ATTGGCTTGTTCCAGTTCCCTAATGTATTTCTGCAGTaGGTCTTTAATGGCTTTCGTCTGCGCCAGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: IGLFQFPNVFLQ*VFNGFRLRQVI Trigger: GATGACCTGGCGCAGACGAAAGCCATTAAAGACCAACTGCAGAAATACATTAGGGAACTGGAACAAGCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
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| CDS CAA 72 bp | ATGATTGTGGCTCGTTTGGCTCTTTCCAGGTCATCATaGGCTTGTTCCAGTTCCCTAATGTATTTCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: MIVARLALSRSS*ACSSSLMYFCS Trigger: ACTGCAGAAATACATTAGGGAACTGGAACAAGCCAATGATGACCTGGAAAGAGCCAAACGAGCCACAATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023359.13 ENSMUST00000115795.9 ENSMUST00000117958.8 |
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