Pregenerated sensors for NDC80 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024056Ensembl transcript IDs: ENSMUST00000024851.10, ENSMUST00000232863.2, ENSMUST00000233750.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCTTGTGACTTTGGGTAAGTCTCTGAGCAAACCTAGAGCTCCCTaGTGTGGTCAGATCGGCTGGTCCGCAAGCTCTCGGGATCCATCT | + |
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Preference number: 1 (lower is better) Translates to: HLVTLGKSLSKPRAP*CGQIGWSASSRDPS Trigger: AGATGGATCCCGAGAGCTTGCGGACCAGCCGATCTGACCACATCAGGGAGCTCTAGGTTTGCTCAGAGACTTACCCAAAGTCACAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR CCA 90 bp | TGTGGCAGATGCTGCCTTCTGTACTGGCAATTTTCATTTTCCTCCTaGAATGTCCCATTGCCCTTAGCCTGCTTAAGCTTTCTTCCACCG | + |
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Preference number: 1 (lower is better) Translates to: CGRCCLLYWQFSFSS*NVPLPLACLSFLPP Trigger: CGGTGGAAGAAAGCTTAAGCAGGCTAAGGGCAATGGGACATTCCAGGAGGAAAATGAAAATTGCCAGTACAGAAGGCAGCATCTGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR TCA 90 bp | TGGGCCATGTGCACAAGCTGGAACTCTCCTTGTGACTCTTTAGGATaGCACAATCCTGAAAATTCTAAGGGAATGCTTCTGGTTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: WAMCTSWNSPCDSLG*HNPENSKGMLLVSL Trigger: GAGGGAAACCAGAAGCATTCCCTTAGAATTTTCAGGATTGTGTCATCCTAAAGAGTCACAAGGAGAGTTCCAGCTTGTGCACATGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR TCA 90 bp | GCTTTCTTCCACCGCACCTGCTGCTGTTTGCCTACAGTTCCTCACTaGATTTTCATTCCTTTCTACCTAACAGAATACGAGCTCCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: AFFHRTCCCLPTVPH*IFIPFYLTEYELLR Trigger: TCTCAGGAGCTCGTATTCTGTTAGGTAGAAAGGAATGAAAATTCAGTGAGGAACTGTAGGCAAACAGCAGCAGGTGCGGTGGAAGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR GCA 90 bp | AATCTGGATGCTCCACTAATAAAACACAAGATAAAGTTAAGATGCTaGTATCGGGGCGGGAGAGATGGCTCAGGGTTGAGAACACTGGCT | + |
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Preference number: 1 (lower is better) Translates to: NLDAPLIKHKIKLRC*YRGGRDGSGLRTLA Trigger: AGCCAGTGTTCTCAACCCTGAGCCATCTCTCCCGCCCCGATAGCAGCATCTTAACTTTATCTTGTGTTTTATTAGTGGAGCATCCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR GCA 90 bp | GACAATCTGGATGCTCCACTAATAAAACACAAGATAAAGTTAAGATaGTGCTATCGGGGCGGGAGAGATGGCTCAGGGTTGAGAACACTG | + |
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Preference number: 1 (lower is better) Translates to: DNLDAPLIKHKIKLR*CYRGGRDGSGLRTL Trigger: CAGTGTTCTCAACCCTGAGCCATCTCTCCCGCCCCGATAGCAGCATCTTAACTTTATCTTGTGTTTTATTAGTGGAGCATCCAGATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR TCA 90 bp | AGCTTATTTGTTAGCCCATCTAAAACACCTTCCATCAGAGTCCTCTaGAGGAGGCTCACGAGTCTAAAGAGCTGTCCAGTGAGTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: SLFVSPSKTPSIRVL*RRLTSLKSCPVSSE Trigger: TTCTGAACTCACTGGACAGCTCTTTAGACTCGTGAGCCTCCTTCAGAGGACTCTGATGGAAGGTGTTTTAGATGGGCTAACAAATAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR CCA 90 bp | GCTCTTGGACAGTGTGAAGGGATACCCAAGTGCTTTAAAAATTCTTaGGACCTCTTCTTCACATTTTGTACCAGGAAGTTCATACGACGG | + |
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Preference number: 1 (lower is better) Translates to: ALGQCEGIPKCFKNS*DLFFTFCTRKFIRR Trigger: CCGTCGTATGAACTTCCTGGTACAAAATGTGAAGAAGAGGTCCCAAGAATTTTTAAAGCACTTGGGTATCCCTTCACACTGTCCAAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR GCA 90 bp | GCAGTCGTCTTCCTTTGTATCTTGAGTACTGGCATTAAAGTCATGTaGCATCACTGTCGGCCTCATTTGGTATTTTATTACATTGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: AVVFLCILSTGIKVM*HHCRPHLVFYYIAL Trigger: GAGAGCAATGTAATAAAATACCAAATGAGGCCGACAGTGATGGCACATGACTTTAATGCCAGTACTCAAGATACAAAGGAAGACGACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR GCA 90 bp | AACTTATTGTGTTTAATTCCATCTTCAGTCTCTTCTCCCCAGAGCTaGCCATCATCAAATAAAGGTGAGCTTTCTTTCATGGCAGTATCA | + |
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Preference number: 1 (lower is better) Translates to: NLLCLIPSSVSSPQS*PSSNKGELSFMAVS Trigger: TGATACTGCCATGAAAGAAAGCTCACCTTTATTTGATGATGGGCAGCTCTGGGGAGAAGAGACTGAAGATGGAATTAAACACAATAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR GCA 90 bp | GACTATTCGATTTCTGTTTCAGGACGGCTAAATGAGACTCCAAGTTaGTCATGTATGCTTTATAGTTTTGAACATCTGCTTGTAAGGACG | + |
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Preference number: 1 (lower is better) Translates to: DYSISVSGRLNETPS*SCMLYSFEHLLVRT Trigger: CGTCCTTACAAGCAGATGTTCAAAACTATAAAGCATACATGAGCAACTTGGAGTCTCATTTAGCCGTCCTGAAACAGAAATCGAATAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGTCCTGAGTTCAAATCCCAGCAACCACATCGTGGCTCACAACCATTTGTAAGCAACCACCCAGAATaGAGTGACAGAGCCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: EGPEFKSQQPHRGSQPFVSNHPE*SDRATG Trigger: CCCTGTGGCTCTGTCACTTCATTCTGGGTGGTTGCT...TACAAATGGTTGTGAGCCACGATGTGGTTGCTGGGATTTGAACTCAGGACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCAGAGTCCTCTGAAGGAGGCTCACGAGTCTAAAGAGCTGTCCAGTGAGCTGATGCCCTCTTCTTaGGTGTCTGAAGACAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: FHQSPLKEAHESKELSSELMPSS*VSEDSY Trigger: GTAGCTGTCTTCAGACACCCAAGAAGAGGGCATCAG...CTCACTGGACAGCTCTTTAGACTCGTGAGCCTCCTTCAGAGGACTCTGATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR CAA 90 bp | TGCCTTCTGTACTGGCAATTTTCATTTTCCTCCTGGAATGTCCCATaGCCCTTAGCCTGCTTAAGCTTTCTTCCACCGCACCTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: CLLYWQFSFSSWNVP*PLACLSFLPPHLLL Trigger: CAGCAGCAGGTGCGGTGGAAGAAAGCTTAAGCAGGCTAAGGGCAATGGGACATTCCAGGAGGAAAATGAAAATTGCCAGTACAGAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR CAA 90 bp | ATAAAGTTAAGATGCTGCTATCGGGGCGGGAGAGATGGCTCAGGGTaGAGAACACTGGCTCTTCTTCACAGGACCTGCATTAGATCCCTA | + |
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Preference number: 2 (lower is better) Translates to: IKLRCCYRGGRDGSG*RTLALLHRTCIRSL Trigger: TAGGGATCTAATGCAGGTCCTGTGAAGAAGAGCCAGTGTTCTCAACCCTGAGCCATCTCTCCCGCCCCGATAGCAGCATCTTAACTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATCAGAGTCCTCTGAAGGAGGCTCACGAGTCTAAAGAGCTGTCCAGTGAGAGTAATTTACAGGGCTaGAGACATGGTTTAGCGGTT | + |
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Preference number: 2 (lower is better) Translates to: FHQSPLKEAHESKELSSESNLQG*RHGLAV Trigger: AACCGCTAAACCATGTCTTCAGCCCTGTAAATTACT...CTCACTGGACAGCTCTTTAGACTCGTGAGCCTCCTTCAGAGGACTCTGATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCATCCTCTTCTTCAAAGCTGTCGGCCCCGGTCATGAACTTCTCATAGCATTAGTGGATGGAGCTTaGAGAGACTTCATGGATACA | + |
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Preference number: 2 (lower is better) Translates to: LSILFFKAVGPGHELLIALVDGA*RDFMDT Trigger: TGTATCCATGAAGTCTCTGCAAGCTCCATCCACTAA...TGCTATGAGAAGTTCATGACCGGGGCCGACAGCTTTGAAGAAGAGGATGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR CAA 90 bp | CAGGCAGGAATCTTTCATCATATCCTGAGCACTGTTAGTCCACGGTaGATGGACCACAGGGAAAAACAAAGCACCACAGACATCATGCAT | + |
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Preference number: 2 (lower is better) Translates to: QAGIFHHILSTVSPR*MDHREKQSTTDIMH Trigger: ATGCATGATGTCTGTGGTGCTTTGTTTTTCCCTGTGGTCCATCAACCGTGGACTAACAGTGCTCAGGATATGATGAAAGATTCCTGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGACGGCTAAATGAGACTCCAAGTTGCTCATGTATGCTTTATAGTTTTGAACCACCCAGAATGAAGTaGCAGAGCCACAGGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: SGRLNETPSCSCMLYSFEPPRMK*QSHRGT Trigger: TGTCCCCCTGTGGCTCTGTCACTTCATTCTGGGTGG...TTCAAAACTATAAAGCATACATGAGCAACTTGGAGTCTCATTTAGCCGTCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCAGAGTCCTCTGAAGGAGGCTCACGAGTCTAAAGAGCTGTCCAGTGAGTTTTCATTTTCCTCCTaGAATGTCCCATTGCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: FHQSPLKEAHESKELSSEFSFSS*NVPLPL Trigger: TAAGGGCAATGGGACATTCCAGGAGGAAAATGAAAA...CTCACTGGACAGCTCTTTAGACTCGTGAGCCTCCTTCAGAGGACTCTGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR CAA 90 bp | AAAACCAGGGTGAATTTGACCTCAGCAGTCGTCTTCCTTTGTATCTaGAGTACTGGCATTAAAGTCATGTGCCATCACTGTCGGCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: KTRVNLTSAVVFLCI*STGIKVMCHHCRPH Trigger: ATGAGGCCGACAGTGATGGCACATGACTTTAATGCCAGTACTCAAGATACAAAGGAAGACGACTGCTGAGGTCAAATTCACCCTGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATCAGAGTCCTCTGAAGGAGGCTCACGAGTCTAAAGAGCTGTCCAGTGAGTCTTCCTTTGTATCTTaGGTACTGGCATTAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: FHQSPLKEAHESKELSSESSFVS*VLALKS Trigger: TGACTTTAATGCCAGTACTCAAGATACAAAGGAAGA...CTCACTGGACAGCTCTTTAGACTCGTGAGCCTCCTTCAGAGGACTCTGATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCCTTTCTACCTAACAGAATACGAGCTCCTGAGACCAAGGATTTCTGTTCTCTTTGGGTAAGTCTCTaGGCAAACCTAGAGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HSFLPNRIRAPETKDFCSLWVSL*ANLELP Trigger: AGGGAGCTCTAGGTTTGCTCAGAGACTTACCCAAAG...AGAACAGAAATCCTTGGTCTCAGGAGCTCGTATTCTGTTAGGTAGAAAGGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCAGAGTCCTCTGAAGGAGGCTCACGAGTCTAAAGAGCTGTCCAGTGAGACTGTCGGCCTCATTTaGTATTTTATTACATTGCTC | + |
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Preference number: 2 (lower is better) Translates to: FHQSPLKEAHESKELSSETVGLI*YFITLL Trigger: GAGCAATGTAATAAAATACCAAATGAGGCCGACAGT...CTCACTGGACAGCTCTTTAGACTCGTGAGCCTCCTTCAGAGGACTCTGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTAGAAGCTCAATTATTTAATATCTGGTTACCGTGCAGGACAATCTGGATGTCGGGGCGGGAGAGATaGCTCAGGGTTGAGAACACT | + |
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Preference number: 2 (lower is better) Translates to: NVEAQLFNIWLPCRTIWMSGRER*LRVENT Trigger: AGTGTTCTCAACCCTGAGCCATCTCTCCCGCCCCGA...CATCCAGATTGTCCTGCACGGTAACCAGATATTAAATAATTGAGCTTCTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCCTTTCTACCTAACAGAATACGAGCTCCTGAGACCAAGGATTTCTGTTCTACATGGGTGTCAAGGTaGCTTTCCCATATCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: HSFLPNRIRAPETKDFCSTWVSR*LSHITA Trigger: TGCAGTGATATGGGAAAGTCACCTTGACACCCATGT...AGAACAGAAATCCTTGGTCTCAGGAGCTCGTATTCTGTTAGGTAGAAAGGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGTCCTGAGTTCAAATCCCAGCAACCACATCGTGGCTCACAACCATTTGTAGAAGGGATACCCAAGTaGTTTAAAAATTCTTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: EGPEFKSQQPHRGSQPFVEGIPK*FKNSWD Trigger: GTCCCAAGAATTTTTAAAGCACTTGGGTATCCCTTC...TACAAATGGTTGTGAGCCACGATGTGGTTGCTGGGATTTGAACTCAGGACCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTTCTCCCCAGAGCTGCCCATCATCAAATAAAGGTGAGCTTTCTTTCATGGAACTCTTTAGTGGATaGAGCTTGCAGAGACTTCAT | + |
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Preference number: 2 (lower is better) Translates to: VSSPQSCPSSNKGELSFMELFSG*SLQRLH Trigger: ATGAAGTCTCTGCAAGCTCCATCCACTAAAGAGTTC...CATGAAAGAAAGCTCACCTTTATTTGATGATGGGCAGCTCTGGGGAGAAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR CAA 90 bp | GTAGTCCTGGCTGTTCTCAAATTCACTTTGAAAACCAGGGTGAATTaGACCTCAGCAGTCGTCTTCCTTTGTATCTTGAGTACTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: VVLAVLKFTLKTRVN*TSAVVFLCILSTGI Trigger: AATGCCAGTACTCAAGATACAAAGGAAGACGACTGCTGAGGTCAAATTCACCCTGGTTTTCAAAGTGAATTTGAGAACAGCCAGGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCCTTTCTACCTAACAGAATACGAGCTCCTGAGACCAAGGATTTCTGTTCTATGAGAAATCAGGCCTaGAAAGATAAGCAACCACCC | + |
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Preference number: 2 (lower is better) Translates to: HSFLPNRIRAPETKDFCSMRNQA*KDKQPP Trigger: GGGTGGTTGCTTATCTTTCCAGGCCTGATTTCTCAT...AGAACAGAAATCCTTGGTCTCAGGAGCTCGTATTCTGTTAGGTAGAAAGGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR CAA 90 bp | TTGAGTACTGGCATTAAAGTCATGTGCCATCACTGTCGGCCTCATTaGGTATTTTATTACATTGCTCTCTCATGTGCAAAGCTTCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: LSTGIKVMCHHCRPH*VFYYIALSCAKLPR Trigger: TCTCGGAAGCTTTGCACATGAGAGAGCAATGTAATAAAATACCAAATGAGGCCGACAGTGATGGCACATGACTTTAATGCCAGTACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTAGAAGCTCAATTATTTAATATCTGGTTACCGTGCAGGACAATCTGGATGGCACCTGCTGCTGTTTaGCTACAGTTCCTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: NVEAQLFNIWLPCRTIWMAPAAV*LQFLTE Trigger: TTCAGTGAGGAACTGTAGGCAAACAGCAGCAGGTGC...CATCCAGATTGTCCTGCACGGTAACCAGATATTAAATAATTGAGCTTCTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGGCTATTCTATACTCTATAAGCCAGTTTGTTACCATTCTATTTTCACCAACTTCTTCCACCGCACCTaGTGCTGTTTGCCTACAGTT | + |
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Preference number: 2 (lower is better) Translates to: VGYSILYKPVCYHSIFTNFFHRT*CCLPTV Trigger: AACTGTAGGCAAACAGCAGCAGGTGCGGTGGAAGAA...GTTGGTGAAAATAGAATGGTAACAAACTGGCTTATAGAGTATAGAATAGCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCCTTTCTACCTAACAGAATACGAGCTCCTGAGACCAAGGATTTCTGTTCTTGTCGAATACACTGCTaGATGAATGCTTTGTCATTA | + |
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Preference number: 2 (lower is better) Translates to: HSFLPNRIRAPETKDFCSCRIHC*MNALSL Trigger: TAATGACAAAGCATTCATTCAGCAGTGTATTCGACA...AGAACAGAAATCCTTGGTCTCAGGAGCTCGTATTCTGTTAGGTAGAAAGGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR GCA 90 bp | CATTCCTTTCTACCTAACAGAATACGAGCTCCTGAGACCAAGGATTTCTGTTCTACACTGCTGAATGAATaGTTTGTCATTAAGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: HSFLPNRIRAPETKDFCSTLLNE*FVIKWS Trigger: AGACCACTTAATGACAAAGCATTCATTCAGCAGTGT...AGAACAGAAATCCTTGGTCTCAGGAGCTCGTATTCTGTTAGGTAGAAAGGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGTGTTTTCCTGTTTAACAGTTTCACATTCTTGTTCTACTCTACCAATTTCTGGATGTGGCAGATGCTaGCTTCTGTACTGGCAATTT | + |
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Preference number: 2 (lower is better) Translates to: RVFSCLTVSHSCSTLPISGCGRC*LLYWQF Trigger: AAATTGCCAGTACAGAAGGCAGCATCTGCCACATCC...AGAAATTGGTAGAGTAGAACAAGAATGTGAAACTGTTAAACAGGAAAACACTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTATACATGGAGCTCTTGGACAGTGTGAAGGGATACCCAAGTGCTTTAAAATGCTTTGTCATTAAGTaGTCTTGGGTCCTTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: TVYMELLDSVKGYPSALKCFVIK*SWVLDF Trigger: AAAATCAAGGACCCAAGACCACTTAATGACAAAGCA...TTTTAAAGCACTTGGGTATCCCTTCACACTGTCCAAGAGCTCCATGTATACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGGCTATTCTATACTCTATAAGCCAGTTTGTTACCATTCTATTTTCACCAACCTAAGGGAATGCTTCTaGTTTCCCTCTCACCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: VGYSILYKPVCYHSIFTNLRECF*FPSHLG Trigger: ACCAAGGTGAGAGGGAAACCAGAAGCATTCCCTTAG...GTTGGTGAAAATAGAATGGTAACAAACTGGCTTATAGAGTATAGAATAGCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | CGAGTGTTTTCCTGTTTAACAGTTTCACATTCTTGTTCTACTCTACCAATTTCTTTGTGCTTTTGTGTGTaGGATCCAGACTCAGGATCC | + |
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Preference number: 2 (lower is better) Translates to: RVFSCLTVSHSCSTLPISLCFCV*DPDSGS Trigger: GGATCCTGAGTCTGGATCCCACACACAAAAGCACAA...AGAAATTGGTAGAGTAGAACAAGAATGTGAAACTGTTAAACAGGAAAACACTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGACGGCTAAATGAGACTCCAAGTTGCTCATGTATGCTTTATAGTTTTGAACCTACAGTTCCTCACTaGATTTTCATTCCTTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: SGRLNETPSCSCMLYSFEPTVPH*IFIPFY Trigger: GTAGAAAGGAATGAAAATTCAGTGAGGAACTGTAGG...TTCAAAACTATAAAGCATACATGAGCAACTTGGAGTCTCATTTAGCCGTCCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGTTCCTCACTGAATTTTCATTCCTTTCTACCTAACAGAATACGAGCTCCTAAAATTCTAAGGGAATaGTTCTGGTTTCCCTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: YSSSLNFHSFLPNRIRAPKILRE*FWFPSH Trigger: GTGAGAGGGAAACCAGAAGCATTCCCTTAGAATTTT...AGGAGCTCGTATTCTGTTAGGTAGAAAGGAATGAAAATTCAGTGAGGAACTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTAGAAGCTCAATTATTTAATATCTGGTTACCGTGCAGGACAATCTGGATGTTCCACACCTTTTTCTaGTTTCCATGGGCACTGTTA | + |
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Preference number: 2 (lower is better) Translates to: NVEAQLFNIWLPCRTIWMFHTFF*FPWALL Trigger: TAACAGTGCCCATGGAAACCAGAAAAAGGTGTGGAA...CATCCAGATTGTCCTGCACGGTAACCAGATATTAAATAATTGAGCTTCTACATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGACGGCTAAATGAGACTCCAAGTTGCTCATGTATGCTTTATAGTTTTGAAGAAAATATACCAAGTTaGCTATTCCTGGATCCATGT | + |
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Preference number: 2 (lower is better) Translates to: SGRLNETPSCSCMLYSFEENIPS*LFLDPC Trigger: ACATGGATCCAGGAATAGTCAACTTGGTATATTTTC...TTCAAAACTATAAAGCATACATGAGCAACTTGGAGTCTCATTTAGCCGTCCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGTGTTTTCCTGTTTAACAGTTTCACATTCTTGTTCTACTCTACCAATTTCTTCTAGCCCTGACTTCTaGCTTCCTAAATCAATCCAT | + |
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Preference number: 2 (lower is better) Translates to: RVFSCLTVSHSCSTLPISSSPDF*LPKSIH Trigger: ATGGATTGATTTAGGAAGGCAGAAGTCAGGGCTAGA...AGAAATTGGTAGAGTAGAACAAGAATGTGAAACTGTTAAACAGGAAAACACTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACGGCTAAATGAGACTCCAAGTTGCTCATGTATGCTTTATAGTTTTGAACTTGCAGAGACTTCATaGATACACTATACACATAAC | + |
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Preference number: 2 (lower is better) Translates to: SGRLNETPSCSCMLYSFELAETS*IHYTHN Trigger: GTTATGTGTATAGTGTATCCATGAAGTCTCTGCAAG...TTCAAAACTATAAAGCATACATGAGCAACTTGGAGTCTCATTTAGCCGTCCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| 3UTR CAA 90 bp | GCTTGTAAGGACGCTTTCAGTTTCTTCAATGACATCAGACGGTTCTaGAAAGAACATATTCAATTAGTTATTTTCACCAAGAAGCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: ACKDAFSFFNDIRRF*KEHIQLVIFTKKHS Trigger: AGAATGCTTCTTGGTGAAAATAACTAATTGAATATGTTCTTTCAAGAACCGTCTGATGTCATTGAAGAAACTGAAAGCGTCCTTACAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGTAGAAGCTCAATTATTTAATATCTGGTTACCGTGCAGGACAATCTGGATGTTGGTGCCTGACACTTaGGTACATAATATTTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: NVEAQLFNIWLPCRTIWMLVPDT*VHNIYL Trigger: CAAATAAATATTATGTACCCAAGTGTCAGGCACCAA...CATCCAGATTGTCCTGCACGGTAACCAGATATTAAATAATTGAGCTTCTACATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | GACAGAGCCACAGGGGGACACTCACTCAGCTTCGCCTaGAGCTCAGCATCCTCTTCTTCAAAGCTGTCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: DRATGGHSLSFA*SSASSSSKLSA Trigger: GGCCGACAGCTTTGAAGAAGAGGATGCTGAGCTGCAGGCGAAGCTGAGTGAGTGTCCCCCTGTGGCTCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR TCA 72 bp | CAGGATCCACGCTGGCTGAGGATGTTCCTCACTGACTaGACCGGGTCTCTAGCCCTGACTTCTGCCTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: QDPRWLRMFLTD*TGSLALTSAFL Trigger: TAGGAAGGCAGAAGTCAGGGCTAGAGACCCGGTTCAGTCAGTGAGGAACATCCTCAGCCAGCGTGGATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR TCA 72 bp | GACTCAGGATCCACGCTGGCTGAGGATGTTCCTCACTaGCTGAACCGGGTCTCTAGCCCTGACTTCTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: DSGSTLAEDVPH*LNRVSSPDFCL Trigger: AAGGCAGAAGTCAGGGCTAGAGACCCGGTTCAGTCAGTGAGGAACATCCTCAGCCAGCGTGGATCCTGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR CCA 72 bp | ACGGCCACACTTGTGCCGCACTTGTGCTTTTGTGTGTaGGATCCAGACTCAGGATCCACGCTGGCTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TATLVPHLCFCV*DPDSGSTLAED Trigger: ATCCTCAGCCAGCGTGGATCCTGAGTCTGGATCCCACACACAAAAGCACAAGTGCGGCACAAGTGTGGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR TCA 72 bp | CAGGCCTGGAAAGATAAGCAACCACCCAGAATGAAGTaGCAGAGCCACAGGGGGACACTCACTCAGCTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: QAWKDKQPPRMK*QSHRGTLTQLR Trigger: GCGAAGCTGAGTGAGTGTCCCCCTGTGGCTCTGTCACTTCATTCTGGGTGGTTGCTTATCTTTCCAGGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR TCA 72 bp | AATCGACTCACAACGCTCTCCAGGTTTCCAGCAGCTTaGTCCCTCGCTTCCCCAAACCACGGATGTGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NRLTTLSRFPAA*SLASPNHGCGR Trigger: TCTGCCACATCCGTGGTTTGGGGAAGCGAGGGATCAAGCTGCTGGAAACCTGGAGAGCGTTGTGAGTCGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR TCA 72 bp | GATGCTGCTATCGGGGCGGGAGAGATGGCTCAGGGTTaGGAACACTGGCTCTTCTTCACAGGACCTGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: DAAIGAGEMAQG*EHWLFFTGPAL Trigger: TAATGCAGGTCCTGTGAAGAAGAGCCAGTGTTCTCAACCCTGAGCCATCTCTCCCGCCCCGATAGCAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | AGTGCTGAGACTACGGCCACACTTGTGCCGCACTTGTaGTTTTGTGTGTGGGATCCAGACTCAGGATCCACG | + |
|
Preference number: 3 (lower is better) Translates to: SAETTATLVPHL*FCVWDPDSGST Trigger: CGTGGATCCTGAGTCTGGATCCCACACACAAAAGCACAAGTGCGGCACAAGTGTGGCCGTAGTCTCAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR CCA 72 bp | GATAAAGTTAAGATGCTGCTATCGGGGCGGGAGAGATaGCTCAGGGTTGAGAACACTGGCTCTTCTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: DKVKMLLSGRER*LRVENTGSSSQ Trigger: CTGTGAAGAAGAGCCAGTGTTCTCAACCCTGAGCCATCTCTCCCGCCCCGATAGCAGCATCTTAACTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTGCCTTCTGTACTGGCAATTTTCATTTTCCTCCTGGAATGTCCCATTGCGCCGCACTTGTGCTTTaGTGTGTGGGATCCAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: DAAFCTGNFHFPPGMSHCAALVL*CVGSRL Trigger: GAGTCTGGATCCCACACACAAAAGCACAAGTGCGGC...GCAATGGGACATTCCAGGAGGAAAATGAAAATTGCCAGTACAGAAGGCAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | TCATTTTCCTCCTGGAATGTCCCATTGCCCTTAGCCTaGTTAAGCTTTCTTCCACCGCACCTGCTGCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SFSSWNVPLPLA*LSFLPPHLLLF Trigger: AAACAGCAGCAGGTGCGGTGGAAGAAAGCTTAAGCAGGCTAAGGGCAATGGGACATTCCAGGAGGAAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | CTCCAGCTTAGACGCATCTACCTTGTACAAGTCCTCTaGAGACAAAGCCCAACACCTCATCAGAATCGACTC | + |
|
Preference number: 3 (lower is better) Translates to: LQLRRIYLVQVL*RQSPTPHQNRL Trigger: GAGTCGATTCTGATGAGGTGTTGGGCTTTGTCTGCAGAGGACTTGTACAAGGTAGATGCGTCTAAGCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR CCA 72 bp | CCAAACCACGGATGTGGCAGATGCTGCCTTCTGTACTaGCAATTTTCATTTTCCTCCTGGAATGTCCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: PNHGCGRCCLLY*QFSFSSWNVPL Trigger: CAATGGGACATTCCAGGAGGAAAATGAAAATTGCCAGTACAGAAGGCAGCATCTGCCACATCCGTGGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATCAGAGTCCTCTGAAGGAGGCTCACGAGTCTAAAGAGCTGTCCAGTGAGCACTGTCGGCCTCATTaGGTATTTTATTACATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FHQSPLKEAHESKELSSEHCRPH*VFYYIA Trigger: AGCAATGTAATAAAATACCAAATGAGGCCGACAGTG...CTCACTGGACAGCTCTTTAGACTCGTGAGCCTCCTTCAGAGGACTCTGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR TCA 72 bp | CAGCATCCTCTTCTTCAAAGCTGTCGGCCCCGGTCATaGACTTCTCATAGCACTTTTTGGTGTACTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QHPLLQSCRPRS*TSHSTFWCTPK Trigger: TTTTGGAGTACACCAAAAAGTGCTATGAGAAGTTCATGACCGGGGCCGACAGCTTTGAAGAAGAGGATGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR TCA 72 bp | CCATTCTATTTTCACCAACTGAAACCCAGGGCCTCTTaGAAACAGTGCTCCCTGCAAGTAAATACTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PFYFHQLKPRAS*KQCSLQVNTPG Trigger: CCCTGGAGTATTTACTTGCAGGGAGCACTGTTTTCAAGAGGCCCTGGGTTTCAGTTGGTGAAAATAGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | GCTCCACTAATAAAACACAAGATAAAGTTAAGATGCTaGTATCGGGGCGGGAGAGATGGCTCAGGGTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: APLIKHKIKLRC*YRGGRDGSGLR Trigger: TCTCAACCCTGAGCCATCTCTCCCGCCCCGATAGCAGCATCTTAACTTTATCTTGTGTTTTATTAGTGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | CTGCTTAAGCTTTCTTCCACCGCACCTGCTGCTGTTTaGCTACAGTTCCTCACTGAATTTTCATTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLKLSSTAPAAV*LQFLTEFSFLS Trigger: AGAAAGGAATGAAAATTCAGTGAGGAACTGTAGGCAAACAGCAGCAGGTGCGGTGGAAGAAAGCTTAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR CCA 72 bp | TGCTGCCTTCTGTACTGGCAATTTTCATTTTCCTCCTaGAATGTCCCATTGCCCTTAGCCTGCTTAAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CCLLYWQFSFSS*NVPLPLACLSF Trigger: AAAGCTTAAGCAGGCTAAGGGCAATGGGACATTCCAGGAGGAAAATGAAAATTGCCAGTACAGAAGGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR TCA 72 bp | TATAAGCCAGTTTGTTACCATTCTATTTTCACCAACTaGAACCCAGGGCCTCTTGAAAACAGTGCTCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: YKPVCYHSIFTN*NPGPLENSAPC Trigger: GCAGGGAGCACTGTTTTCAAGAGGCCCTGGGTTTCAGTTGGTGAAAATAGAATGGTAACAAACTGGCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTCCTTTCTACCTAACAGAATACGAGCTCCTGAGACCAAGGATTTCTGTTCTATGGCAGTATCAATCTaGATGCAGTCTATGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HSFLPNRIRAPETKDFCSMAVSI*MQSMSH Trigger: GTGGCTCATAGACTGCATCAAGATTGATACTGCCAT...AGAACAGAAATCCTTGGTCTCAGGAGCTCGTATTCTGTTAGGTAGAAAGGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR TCA 72 bp | TGCACAAGCTGGAACTCTCCTTGTGACTCTTTAGGATaGCACAATCCTGAAAATTCTAAGGGAATGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CTSWNSPCDSLG*HNPENSKGMLL Trigger: CAGAAGCATTCCCTTAGAATTTTCAGGATTGTGTCATCCTAAAGAGTCACAAGGAGAGTTCCAGCTTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | CATGGAGCTCTTGGACAGTGTGAAGGGATACCCAAGTaGTTTAAAAATTCTTGGGACCTCTTCTTCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: HGALGQCEGIPK*FKNSWDLFFTF Trigger: AAATGTGAAGAAGAGGTCCCAAGAATTTTTAAAGCACTTGGGTATCCCTTCACACTGTCCAAGAGCTCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | CGAGTGTTTTCCTGTTTAACAGTTTCACATTCTTGTTCTACTCTACCAATTTCTGGTTTCCCTCTCACCTaGGTGTCACATGGGTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RVFSCLTVSHSCSTLPISGFPLT*VSHGCQ Trigger: TTGACACCCATGTGACACCAAGGTGAGAGGGAAACC...AGAAATTGGTAGAGTAGAACAAGAATGTGAAACTGTTAAACAGGAAAACACTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAATGTCAGCGACTGAATACTTCTGGTTATCAACGATACTCTGTAGTCGAGTGTTTCCTCCTCCAGTCTaGCAATCTGTTCATTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SMSATEYFWLSTILCSRVFPPPV*QSVHLV Trigger: CACTAAATGAACAGATTGCAAGACTGGAGGAGGAAA...CACTCGACTACAGAGTATCGTTGATAACCAGAAGTATTCAGTCGCTGACATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAGTTCCTCACTGAATTTTCATTCCTTTCTACCTAACAGAATACGAGCTCCTTTTAGTGGATGGAGCTaGCAGAGACTTCATGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: YSSSLNFHSFLPNRIRAPFSGWS*QRLHGY Trigger: GTATCCATGAAGTCTCTGCAAGCTCCATCCACTAAA...AGGAGCTCGTATTCTGTTAGGTAGAAAGGAATGAAAATTCAGTGAGGAACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTACCTAACAGAATACGAGCTCCTGAGACCAAGGATTTCTGTTCTTCATTAAGCAGTCGTCTTCCTTaGTATCTTGAGTACTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: FLPNRIRAPETKDFCSSLSSRLP*YLEYWH Trigger: ATGCCAGTACTCAAGATACAAAGGAAGACGACTGCT...TAATGAAGAACAGAAATCCTTGGTCTCAGGAGCTCGTATTCTGTTAGGTAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAGTTCCTCACTGAATTTTCATTCCTTTCTACCTAACAGAATACGAGCTCCTGGAAAATATACCAAGTaGACTATTCCTGGATCCATG | + |
|
Preference number: 3 (lower is better) Translates to: YSSSLNFHSFLPNRIRAPGKYTK*TIPGSM Trigger: CATGGATCCAGGAATAGTCAACTTGGTATATTTTCC...AGGAGCTCGTATTCTGTTAGGTAGAAAGGAATGAAAATTCAGTGAGGAACTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | TTCCTTTGTATCTTGAGTACTGGCATTAAAGTCATGTaGCATCACTGTCGGCCTCATTTGGTATTTTATTAC | + |
|
Preference number: 3 (lower is better) Translates to: FLCILSTGIKVM*HHCRPHLVFYY Trigger: GTAATAAAATACCAAATGAGGCCGACAGTGATGGCACATGACTTTAATGCCAGTACTCAAGATACAAAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGACGGCTAAATGAGACTCCAAGTTGCTCATGTATGCTTTATAGTTTTGAATGGTATTTTATTACATaGCTCTCTCATGTGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGRLNETPSCSCMLYSFEWYFIT*LSHVQS Trigger: GCTTTGCACATGAGAGAGCAATGTAATAAAATACCA...TTCAAAACTATAAAGCATACATGAGCAACTTGGAGTCTCATTTAGCCGTCCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | ATTTCTGTTTCAGGACGGCTAAATGAGACTCCAAGTTaGTCATGTATGCTTTATAGTTTTGAACATCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ISVSGRLNETPS*SCMLYSFEHLL Trigger: AAGCAGATGTTCAAAACTATAAAGCATACATGAGCAACTTGGAGTCTCATTTAGCCGTCCTGAAACAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGTAGAAGCTCAATTATTTAATATCTGGTTACCGTGCAGGACAATCTGGATGAGGGACAAATATCTTTaGTGTTCCCAACAAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: NVEAQLFNIWLPCRTIWMRDKYL*CSQQRT Trigger: TGTTCTTTGTTGGGAACACAAAAGATATTTGTCCCT...CATCCAGATTGTCCTGCACGGTAACCAGATATTAAATAATTGAGCTTCTACATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR GCA 72 bp | TATTTAATATCTGGTTACCGTGCAGGACAATCTGGATaGTCCACTAATAAAACACAAGATAAAGTTAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: YLISGYRAGQSG*STNKTQDKVKM Trigger: CATCTTAACTTTATCTTGTGTTTTATTAGTGGAGCATCCAGATTGTCCTGCACGGTAACCAGATATTAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTTCTCCCCAGAGCTGCCCATCATCAAATAAAGGTGAGCTTTCTTTCATGGGCCAGCACCACAGGTaGAAACTGAACTGCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSPQSCPSSNKGELSFMGQHHR*KLNCAS Trigger: TGAAGCGCAGTTCAGTTTCCACCTGTGGTGCTGGCC...CATGAAAGAAAGCTCACCTTTATTTGATGATGGGCAGCTCTGGGGAGAAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| CDS-3UTR CCA 90 bp | TTCCATCAGAGTCCTCTGAAGGAGGCTCACGAGTCTAAAGAGCTGTCCAGTGAGAGGTTGATCTTTCTTTaGTTTGAGGGGTATAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FHQSPLKEAHESKELSSERLIFL*FEGYKG Trigger: GCCTTTATACCCCTCAAACCAAAGAAAGATCAACCT...CTCACTGGACAGCTCTTTAGACTCGTGAGCCTCCTTCAGAGGACTCTGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR CAA 72 bp | ACCATTCTATTTTCACCAACTGAAACCCAGGGCCTCTaGAAAACAGTGCTCCCTGCAAGTAAATACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TILFSPTETQGL*KTVLPASKYSR Trigger: CCTGGAGTATTTACTTGCAGGGAGCACTGTTTTCAAGAGGCCCTGGGTTTCAGTTGGTGAAAATAGAATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTAAGAAACTCATAGAGTTGTCGAATACACTGCTGAATGAATGCTTTGTCAGGGTCCTTAACTCCTaGATAGAGAGGCGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FCKKLIELSNTLLNECFVRVLNS*IERRPA Trigger: TGCTGGCCGCCTCTCTATGCAGGAGTTAAGGACCCT...GACAAAGCATTCATTCAGCAGTGTATTCGACAACTCTATGAGTTTCTTACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR CAA 72 bp | GTGAATTTGACCTCAGCAGTCGTCTTCCTTTGTATCTaGAGTACTGGCATTAAAGTCATGTGCCATCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNLTSAVVFLCI*STGIKVMCHHC Trigger: ACAGTGATGGCACATGACTTTAATGCCAGTACTCAAGATACAAAGGAAGACGACTGCTGAGGTCAAATTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR CAA 72 bp | GGCATTAAAGTCATGTGCCATCACTGTCGGCCTCATTaGGTATTTTATTACATTGCTCTCTCATGTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GIKVMCHHCRPH*VFYYIALSCAK Trigger: CTTTGCACATGAGAGAGCAATGTAATAAAATACCAAATGAGGCCGACAGTGATGGCACATGACTTTAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| 3UTR CAA 72 bp | GCTGTTCTCAAATTCACTTTGAAAACCAGGGTGAATTaGACCTCAGCAGTCGTCTTCCTTTGTATCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVLKFTLKTRVN*TSAVVFLCILS Trigger: ACTCAAGATACAAAGGAAGACGACTGCTGAGGTCAAATTCACCCTGGTTTTCAAAGTGAATTTGAGAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| CDS-3UTR TCA 90 bp | CATTCCTTTCTACCTAACAGAATACGAGCTCCTGAGACCAAGGATTTCTGTTCTCCTTTTCCCAAATATTaGGACTTTTCTTTCCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HSFLPNRIRAPETKDFCSPFPKY*DFSFRC Trigger: ACATCGGAAAGAAAAGTCTCAATATTTGGGAAAAGG...AGAACAGAAATCCTTGGTCTCAGGAGCTCGTATTCTGTTAGGTAGAAAGGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
||
| CDS TCA 90 bp | GCTGGTATTCCCGCTGGACGGCGTCCAACTCATCCATGGCCTCGCTaGGGCCATCGTTCACCCCGCTCTCCAGCAGGTGCTTGTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGIPAGRRPTHPWPR*GHRSPRSPAGACVS Trigger: AGAAACACAAGCACCTGCTGGAGAGCGGGGTGAACGATGGCCTCAGCGAGGCCATGGATGAGTTGGACGCCGTCCAGCGGGAATACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024851.10 |
||
| CDS TCA 90 bp | AGATGTTTTCCCGCTGGACGGCGTCCAACTCATCCATGGCCTCGCTaGGGCCATCGTTCACCCCGCTCTCCAGCAGGTGCTTGTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RCFPAGRRPTHPWPR*GHRSPRSPAGACVS Trigger: AGAAACACAAGCACCTGCTGGAGAGCGGGGTGAACGATGGCCTCAGCGAGGCCATGGATGAGTTGGACGCCGTCCAGCGGGAAAACATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232863.2 |
||
| CDS GCA 90 bp | TCCATGGCCTCGCTGAGGCCATCGTTCACCCCGCTCTCCAGCAGGTaGTTGTGTTTCTCCAGGGACTCAAGCTCACTGGCACTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SMASLRPSFTPLSSR*LCFSRDSSSLALFL Trigger: CAAGAAGAGTGCCAGTGAGCTTGAGTCCCTGGAGAAACACAAGCACCTGCTGGAGAGCGGGGTGAACGATGGCCTCAGCGAGGCCATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
||
| CDS CCA 90 bp | CTCTCTGTCGGCTTTAGCATTCTCCTCTTCAAGATGTTTTCCCGCTaGACGGCGTCCAACTCATCCATGGCCTCGCTGAGGCCATCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSVGFSILLFKMFSR*TASNSSMASLRPSF Trigger: GAACGATGGCCTCAGCGAGGCCATGGATGAGTTGGACGCCGTCCAGCGGGAAAACATCTTGAAGAGGAGAATGCTAAAGCCGACAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232863.2 |
||
| CDS CCA 90 bp | CTTCTTTCTTCAGTTGTGGTCTTCACAGTTAGCTGGTATTCCCGCTaGACGGCGTCCAACTCATCCATGGCCTCGCTGAGGCCATCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSSVVVFTVSWYSR*TASNSSMASLRPSF Trigger: GAACGATGGCCTCAGCGAGGCCATGGATGAGTTGGACGCCGTCCAGCGGGAATACCAGCTAACTGTGAAGACCACAACTGAAGAAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024851.10 |
||
| CDS CCA 90 bp | TTCTCAGCACCTTTGGGGATAAGCTTTAATTTTCTAGCCAACTTGTaGTACTCCGCTAGCTGCGCTTCAATCGCCTCTTTGCCTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSAPLGISFNFLANL*YSASCASIASLPLA Trigger: CGCAAGAGGCAAAGAGGCGATTGAAGCGCAGCTAGCGGAGTACCACAAGTTGGCTAGAAAATTAAAGCTTATCCCCAAAGGTGCTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
||
| CDS TCA 90 bp | TCTTCTTCGCTTTCATTCAAGAGCTCTTTGAGCGGTGCATACACTTaGGTCCTGTATTTGACAAGGCAGTTGGCACCCGCCTCAGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSFKSSLSGAYT*VLYLTRQLAPASGL Trigger: TAATCCTGAGGCGGGTGCCAACTGCCTTGTCAAATACAGGACTCAAGTGTATGCACCGCTCAAAGAGCTCTTGAATGAAAGCGAAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCATCCTCTTCTTCAAAGCTGTCGGCCCCGGTCATGAACTTCTCATAGCATCAGCTTTCCAAAGGTaGATCTTTCTTTGGTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LSILFFKAVGPGHELLIASAFQR*IFLWFE Trigger: CTCAAACCAAAGAAAGATCAACCTTTGGAAAGCTGA...TGCTATGAGAAGTTCATGACCGGGGCCGACAGCTTTGAAGAAGAGGATGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233750.2 |
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| CDS GCA 90 bp | TTTGTCGGGAGCCTTAAGTTGGGCAGCATTTCTCTTATACTTCTCTaGCATCTCCCTGATGTTTTCCAGGAGATCTTCAGACATGAATTC | + |
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Preference number: 5 (lower is better) Translates to: FVGSLKLGSISLILL*HLPDVFQEIFRHEF Trigger: GAATTCATGTCTGAAGATCTCCTGGAAAACATCAGGGAGATGGCAGAGAAGTATAAGAGAAATGCTGCCCAACTTAAGGCTCCCGACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 90 bp | CATCCAGTTTCTGAATCTCCTCCTTCAGCATCCTCACAGTGTTCTTaGTTTCCGTTTTCATGGTGTTCAGTTGTTCTAAAGTATCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: HPVSESPPSASSQCS*FPFSWCSVVLKYPP Trigger: TGGAGGATACTTTAGAACAACTGAACACCATGAAAACGGAAAGCAAGAACACTGTGAGGATGCTGAAGGAGGAGATTCAGAAACTGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 90 bp | GCCTCTTTGCCTCTTGCGTATTTTAATTCTTCATTCCACATCTGTTaGTGTTCGGCTTCCAGGTCTTTGGTTAATTTATTAATAGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ASLPLAYFNSSFHIC*CSASRSLVNLLIVC Trigger: GCAGACTATTAATAAATTAACCAAAGACCTGGAAGCCGAACAGCAACAGATGTGGAATGAAGAATTAAAATACGCAAGAGGCAAAGAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 90 bp | CTTTCCGTTTTCATGGTGTTCAGTTGTTCTAAAGTATCCTCCAGATaGCTCTTTTTATTCAGAGCTTTGTTAATTTCTTCTTCGCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: LSVFMVFSCSKVSSR*LFLFRALLISSSLS Trigger: TGAAAGCGAAGAAGAAATTAACAAAGCTCTGAATAAAAAGAGGCATCTGGAGGATACTTTAGAACAACTGAACACCATGAAAACGGAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS TCA 72 bp | CCCGCTGGACGGCGTCCAACTCATCCATGGCCTCGCTaGGGCCATCGTTCACCCCGCTCTCCAGCAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PAGRRPTHPWPR*GHRSPRSPAGA Trigger: AGCACCTGCTGGAGAGCGGGGTGAACGATGGCCTCAGCGAGGCCATGGATGAGTTGGACGCCGTCCAGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 72 bp | TCGCTGAGGCCATCGTTCACCCCGCTCTCCAGCAGGTaGTTGTGTTTCTCCAGGGACTCAAGCTCACTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SLRPSFTPLSSR*LCFSRDSSSLA Trigger: TGCCAGTGAGCTTGAGTCCCTGGAGAAACACAAGCACCTGCTGGAGAGCGGGGTGAACGATGGCCTCAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 72 bp | CTGAGGCCATCGTTCACCCCGCTCTCCAGCAGGTGCTaGTGTTTCTCCAGGGACTCAAGCTCACTGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: LRPSFTPLSSRC*CFSRDSSSLAL Trigger: GAGTGCCAGTGAGCTTGAGTCCCTGGAGAAACACAAGCACCTGCTGGAGAGCGGGGTGAACGATGGCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 90 bp | ATGGCCTCGCTGAGGCCATCGTTCACCCCGCTCTCCAGCAGGTGCTaGTGTTTCTCCAGGGACTCAAGCTCACTGGCACTCTTCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: MASLRPSFTPLSSRC*CFSRDSSSLALFLS Trigger: AGACAAGAAGAGTGCCAGTGAGCTTGAGTCCCTGGAGAAACACAAGCACCTGCTGGAGAGCGGGGTGAACGATGGCCTCAGCGAGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 72 bp | AGGCCTGGCTTATTGAGGTCCAGGGTCCTTAACTCCTaGATAGAGAGGCGGCCAGCACCACAGGTGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: RPGLLRSRVLNS*IERRPAPQVET Trigger: AGTTTCCACCTGTGGTGCTGGCCGCCTCTCTATGCAGGAGTTAAGGACCCTGGACCTCAATAAGCCAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 ENSMUST00000233750.2 |
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| CDS CCA 72 bp | GGCTTTAGCATTCTCCTCTTCAAGATGTTTTCCCGCTaGACGGCGTCCAACTCATCCATGGCCTCGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GFSILLFKMFSR*TASNSSMASLR Trigger: CCTCAGCGAGGCCATGGATGAGTTGGACGCCGTCCAGCGGGAAAACATCTTGAAGAGGAGAATGCTAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232863.2 |
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| CDS CAA 72 bp | TCTGCTTCGAGTGACTCCAGCTTAGACGCATCTACCTaGTACAAGTCCTTCAGCTTCGCCTGCAGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SASSDSSLDAST*YKSFSFACSSA Trigger: TGCTGAGCTGCAGGCGAAGCTGAAGGACTTGTACAAGGTAGATGCGTCTAAGCTGGAGTCACTCGAAGCAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS TCA 72 bp | CTTTCATTCAAGAGCTCTTTGAGCGGTGCATACACTTaGGTCCTGTATTTGACAAGGCAGTTGGCACCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LSFKSSLSGAYT*VLYLTRQLAPA Trigger: GGCGGGTGCCAACTGCCTTGTCAAATACAGGACTCAAGTGTATGCACCGCTCAAAGAGCTCTTGAATGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 72 bp | GCTTTCATTCAAGAGCTCTTTGAGCGGTGCATACACTaGAGTCCTGTATTTGACAAGGCAGTTGGCACCCGC | + |
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Preference number: 6 (lower is better) Translates to: AFIQELFERCIH*SPVFDKAVGTR Trigger: GCGGGTGCCAACTGCCTTGTCAAATACAGGACTCAAGTGTATGCACCGCTCAAAGAGCTCTTGAATGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 72 bp | GCACCTTTGGGGATAAGCTTTAATTTTCTAGCCAACTaGTGGTACTCCGCTAGCTGCGCTTCAATCGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: APLGISFNFLAN*WYSASCASIAS Trigger: AGAGGCGATTGAAGCGCAGCTAGCGGAGTACCACAAGTTGGCTAGAAAATTAAAGCTTATCCCCAAAGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 90 bp | TTCTTCTTCGCTTTCATTCAAGAGCTCTTTGAGCGGTGCATACACTaGAGTCCTGTATTTGACAAGGCAGTTGGCACCCGCCTCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: FFFAFIQELFERCIH*SPVFDKAVGTRLRI Trigger: AATCCTGAGGCGGGTGCCAACTGCCTTGTCAAATACAGGACTCAAGTGTATGCACCGCTCAAAGAGCTCTTGAATGAAAGCGAAGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 90 bp | ACTTGTGGTACTCCGCTAGCTGCGCTTCAATCGCCTCTTTGCCTCTaGCGTATTTTAATTCTTCATTCCACATCTGTTGCTGTTCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TCGTPLAALQSPLCL*RILILHSTSVAVRL Trigger: AAGCCGAACAGCAACAGATGTGGAATGAAGAATTAAAATACGCAAGAGGCAAAGAGGCGATTGAAGCGCAGCTAGCGGAGTACCACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 90 bp | CTAGCCAACTTGTGGTACTCCGCTAGCTGCGCTTCAATCGCCTCTTaGCCTCTTGCGTATTTTAATTCTTCATTCCACATCTGTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LANLWYSASCASIAS*PLAYFNSSFHICCC Trigger: ACAGCAACAGATGTGGAATGAAGAATTAAAATACGCAAGAGGCAAAGAGGCGATTGAAGCGCAGCTAGCGGAGTACCACAAGTTGGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 90 bp | GAATTCTCAGCACCTTTGGGGATAAGCTTTAATTTTCTAGCCAACTaGTGGTACTCCGCTAGCTGCGCTTCAATCGCCTCTTTGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: EFSAPLGISFNFLAN*WYSASCASIASLPL Trigger: AAGAGGCAAAGAGGCGATTGAAGCGCAGCTAGCGGAGTACCACAAGTTGGCTAGAAAATTAAAGCTTATCCCCAAAGGTGCTGAGAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CCA 72 bp | CCTTTGGGGATAAGCTTTAATTTTCTAGCCAACTTGTaGTACTCCGCTAGCTGCGCTTCAATCGCCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PLGISFNFLANL*YSASCASIASL Trigger: CAAAGAGGCGATTGAAGCGCAGCTAGCGGAGTACCACAAGTTGGCTAGAAAATTAAAGCTTATCCCCAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 72 bp | TGTGGTACTCCGCTAGCTGCGCTTCAATCGCCTCTTTaGCTCTTGCGTATTTTAATTCTTCATTCCACATCT | + |
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Preference number: 6 (lower is better) Translates to: CGTPLAALQSPL*LLRILILHSTS Trigger: AGATGTGGAATGAAGAATTAAAATACGCAAGAGGCAAAGAGGCGATTGAAGCGCAGCTAGCGGAGTACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 72 bp | ACTCCGCTAGCTGCGCTTCAATCGCCTCTTTGCCTCTaGCGTATTTTAATTCTTCATTCCACATCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: TPLAALQSPLCL*RILILHSTSVA Trigger: AGCAACAGATGTGGAATGAAGAATTAAAATACGCAAGAGGCAAAGAGGCGATTGAAGCGCAGCTAGCGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CAA 72 bp | TTGTGGTACTCCGCTAGCTGCGCTTCAATCGCCTCTTaGCCTCTTGCGTATTTTAATTCTTCATTCCACATC | + |
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Preference number: 6 (lower is better) Translates to: LWYSASCASIAS*PLAYFNSSFHI Trigger: GATGTGGAATGAAGAATTAAAATACGCAAGAGGCAAAGAGGCGATTGAAGCGCAGCTAGCGGAGTACCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS TCA 72 bp | CCTGGATCCATGTCCGCTAGTCCTTTTCCCAAATATTaGGACTTTTCTTTCCGATGTCGGTTTGTGTGTACT | + |
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Preference number: 6 (lower is better) Translates to: PGSMSASPFPKY*DFSFRCRFVCT Trigger: AGTACACACAAACCGACATCGGAAAGAAAAGTCTCAATATTTGGGAAAAGGACTAGCGGACATGGATCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 72 bp | TTTAATTTTCTAGCCAACTTGTGGTACTCCGCTAGCTaGGCTTCAATCGCCTCTTTGCCTCTTGCGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: FNFLANLWYSAS*ASIASLPLAYF Trigger: AAAATACGCAAGAGGCAAAGAGGCGATTGAAGCGCAGCTAGCGGAGTACCACAAGTTGGCTAGAAAATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 72 bp | TTCTTCTTCGCTTTCATTCAAGAGCTCTTTGAGCGGTaGATACACTTGAGTCCTGTATTTGACAAGGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FFFAFIQELFER*IHLSPVFDKAV Trigger: AACTGCCTTGTCAAATACAGGACTCAAGTGTATGCACCGCTCAAAGAGCTCTTGAATGAAAGCGAAGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 72 bp | TCTGAATCTCCTCCTTCAGCATCCTCACAGTGTTCTTaGTTTCCGTTTTCATGGTGTTCAGTTGTTCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: SESPPSASSQCS*FPFSWCSVVLK Trigger: CTTTAGAACAACTGAACACCATGAAAACGGAAAGCAAGAACACTGTGAGGATGCTGAAGGAGGAGATTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS CCA 72 bp | AGATTAGTTTATCTTCATTTGTCGGGAGCCTTAAGTTaGGCAGCATTTCTCTTATACTTCTCTGCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: RLVYLHLSGALS*AAFLLYFSAIS Trigger: GGAGATGGCAGAGAAGTATAAGAGAAATGCTGCCCAACTTAAGGCTCCCGACAAATGAAGATAAACTAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232863.2 |
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| CDS CAA 72 bp | AAGATTAGTTTATCTTCATTTGTCGGGAGCCTTAAGTaGGGCAGCATTTCTCTTATACTTCTCTGCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: KISLSSFVGSLK*GSISLILLCHL Trigger: GAGATGGCAGAGAAGTATAAGAGAAATGCTGCCCAACTTAAGGCTCCCGACAAATGAAGATAAACTAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232863.2 |
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| CDS CAA 90 bp | AGTTGTTCTAAAGTATCCTCCAGATGCCTCTTTTTATTCAGAGCTTaGTTAATTTCTTCTTCGCTTTCATTCAAGAGCTCTTTGAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SCSKVSSRCLFLFRA*LISSSLSFKSSLSG Trigger: ACCGCTCAAAGAGCTCTTGAATGAAAGCGAAGAAGAAATTAACAAAGCTCTGAATAAAAAGAGGCATCTGGAGGATACTTTAGAACAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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| CDS GCA 72 bp | CCTCTTGCGTATTTTAATTCTTCATTCCACATCTGTTaGTGTTCGGCTTCCAGGTCTTTGGTTAATTTATTA | + |
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Preference number: 6 (lower is better) Translates to: PLAYFNSSFHIC*CSASRSLVNLL Trigger: TAATAAATTAACCAAAGACCTGGAAGCCGAACAGCAACAGATGTGGAATGAAGAATTAAAATACGCAAGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024851.10 ENSMUST00000232863.2 |
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