Pregenerated sensors for NCSTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003458Ensembl transcript IDs: ENSMUST00000003550.11, ENSMUST00000140643.8, ENSMUST00000146137.8
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTGGAGCTCCACTGACTCAGTTCAAAGGCAGGGGACAAGGCCCTaGCCAGTCGCACTGTGGAGCGCACACACTGTGGGAGCCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LWSSTDSVQRQGTRP*PVALWSAHTVGASL Trigger: CAGAGAGGCTCCCACAGTGTGTGCGCTCCACAGTGCGACTGGCCAGGGCCTTGTCCCCTGCCTTTGAACTGAGTCAGTGGAGCTCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | GGGGTGTCGGGTGACAGTGGAGTCAGAGGGCAGTACAGGGCAGGATaGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: GVSGDSGVRGQYRAG*KDRRYPEKGQRRVG Trigger: ACCCACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCCCTCTGACTCCACTGTCACCCGACACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | AGGGGACAAGGCCCTGGCCAGTCGCACTGTGGAGCGCACACACTGTaGGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCCTTGTACCCA | + |
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Preference number: 1 (lower is better) Translates to: RGQGPGQSHCGAHTL*EPLCPVGIPRALYP Trigger: TGGGTACAAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCCCACAGTGTGTGCGCTCCACAGTGCGACTGGCCAGGGCCTTGTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR TCA 90 bp | GCTGCGCCGCATGCAGGTGGCAGTGCTGATGACGGCGTGCATGTGTaGGAAGAGCTGCATAGCACACAATGGGAAGCTTGGTGCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: AAPHAGGSADDGVHV*EELHSTQWEAWCRA Trigger: GGCTCTGCACCAAGCTTCCCATTGTGTGCTATGCAGCTCTTCTCACACATGCACGCCGTCATCAGCACTGCCACCTGCATGCGGCGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR TCA 90 bp | TTCCAGCGGCTCTCCGCCCACGTAGAGTATTCTGTGGAGCTCCACTaGCTCAGTTCAAAGGCAGGGGACAAGGCCCTGGCCAGTCGCACT | + |
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Preference number: 1 (lower is better) Translates to: FQRLSAHVEYSVELH*LSSKAGDKALASRT Trigger: AGTGCGACTGGCCAGGGCCTTGTCCCCTGCCTTTGAACTGAGTCAGTGGAGCTCCACAGAATACTCTACGTGGGCGGAGAGCCGCTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR GCA 90 bp | CTGGATGGAGCTGCTGAAGTTGGTTCCTCCTGCAAGCTCATACAGTaGACGCGCCAGCACTGTGGCCACATTCGCCAGTGCCTTGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: LDGAAEVGSSCKLIQ*TRQHCGHIRQCLGS Trigger: ACTGCCAAGGCACTGGCGAATGTGGCCACAGTGCTGGCGCGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR GCA 90 bp | TGTCTGGGGATCAGCCTGGATGGAGCTGCTGAAGTTGGTTCCTCCTaGAAGCTCATACAGTGCACGCGCCAGCACTGTGGCCACATTCGC | + |
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Preference number: 1 (lower is better) Translates to: CLGISLDGAAEVGSS*KLIQCTRQHCGHIR Trigger: GCGAATGTGGCCACAGTGCTGGCGCGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGGCTGATCCCCAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR GCA 90 bp | CTGGCACTGCTCTCGGGTGAGGTTGGTCGCCTTGCCAGTCAGGTTTaGCAAGGCGTACTGCACAACGTAAGTCGTGTTGGTAGGGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LALLSGEVGRLASQV*QGVLHNVSRVGRAG Trigger: TCCAGCCCTACCAACACGACTTACGTTGTGCAGTACGCCTTGGCAAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | TGCAGCCAGCTGAGTGACAAAGGAGGCTACAGCACTTTCAGCCCCTaGGGCCACATTCCAGAAAAAGGACCGGCTATCCAGCCGTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: CSQLSDKGGYSTFSP*GHIPEKGPAIQPCG Trigger: GCCACACGGCTGGATAGCCGGTCCTTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGTGCTGTAGCCTCCTTTGTCACTCAGCTGGCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | GATAAGGGGTCACAGACGATTTCTGGGTTGATGCTGAAGGTGCTCTaGATGAAGCTGCGCCGCATGCAGGTGGCAGTGCTGATGACGGCG | + |
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Preference number: 1 (lower is better) Translates to: DKGSQTISGLMLKVL*MKLRRMQVAVLMTA Trigger: CGCCGTCATCAGCACTGCCACCTGCATGCGGCGCAGCTTCATCCAGAGCACCTTCAGCATCAACCCAGAAATCGTCTGTGACCCCTTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR GCA 90 bp | TGGATGAAGCTGCGCCGCATGCAGGTGGCAGTGCTGATGACGGCGTaGATGTGTGAGAAGAGCTGCATAGCACACAATGGGAAGCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: WMKLRRMQVAVLMTA*MCEKSCIAHNGKLG Trigger: ACCAAGCTTCCCATTGTGTGCTATGCAGCTCTTCTCACACATGCACGCCGTCATCAGCACTGCCACCTGCATGCGGCGCAGCTTCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR TCA 90 bp | TGCTCTCATTTGGGACTTTACTTGGATCCTGGCACTGCTCTCGGGTaGGGTTGGTCGCCTTGCCAGTCAGGTTTGCCAAGGCGTACTGCA | + |
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Preference number: 1 (lower is better) Translates to: CSHLGLYLDPGTALG*GWSPCQSGLPRRTA Trigger: TGCAGTACGCCTTGGCAAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAATGAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR GCA 90 bp | CCAGCTCCACGAAGGAGTCAATGTTCTCGAGCCGCACGGGAAACTTaGCGTTCTCCATATCATAGACCATCCGTGAGCTGCCAATGTAGT | + |
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Preference number: 1 (lower is better) Translates to: PAPRRSQCSRAARET*RSPYHRPSVSCQCS Trigger: ACTACATTGGCAGCTCACGGATGGTCTATGATATGGAGAACGGCAAGTTTCCCGTGCGGCTCGAGAACATTGACTCCTTCGTGGAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | CGCCAGTGCCTTGGCAGTGTCTGTCACAAAGTTGAGGTCCTCTTCTaGGCTCTGCCACTCAGGATAGGTCACATTAATGTTCTCAGCCGT | + |
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Preference number: 1 (lower is better) Translates to: RQCLGSVCHKVEVLF*ALPLRIGHINVLSR Trigger: ACGGCTGAGAACATTAATGTGACCTATCCTGAGTGGCAGAGCCCAGAAGAGGACCTCAACTTTGTGACAGACACTGCCAAGGCACTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | GTCGCACTGTGGAGCGCACACACTGTGGGAGCCTCTCTGTCCTGTTaGAATTCCAAGGGCCTTGTACCCACGAGTATTCATATAAATCCT | + |
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Preference number: 1 (lower is better) Translates to: VALWSAHTVGASLSC*NSKGLVPTSIHINP Trigger: AGGATTTATATGAATACTCGTGGGTACAAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCCCACAGTGTGTGCGCTCCACAGTGCGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR TCA 90 bp | GGCTCAGCCAGGGAATCCATTTCTTCCCTAAGGGTTCAGGGTAGTTaGATGCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GSARESISSLRVQGS*MQMHNLSHPLPGAA Trigger: TGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAACTACCCTGAACCCTTAGGGAAGAAATGGATTCCCTGGCTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR GCA 90 bp | TATAAATCCTTGCTCTCATTTGGGACTTTACTTGGATCCTGGCACTaGTCTCGGGTGAGGTTGGTCGCCTTGCCAGTCAGGTTTGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: YKSLLSFGTLLGSWH*SRVRLVALPVRFAK Trigger: CTTGGCAAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAATGAGAGCAAGGATTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR TCA 90 bp | GAGCCGCACGGGAAACTTGCCGTTCTCCATATCATAGACCATCCGTaGGCTGCCAATGTAGTCAAAAGTTTCCCCCTGGAAGAAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: EPHGKLAVLHIIDHP*AANVVKSFPLEEDK Trigger: TTTGTCTTCTTCCAGGGGGAAACTTTTGACTACATTGGCAGCTCACGGATGGTCTATGATATGGAGAACGGCAAGTTTCCCGTGCGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | AAGTTTCCCCCTGGAAGAAGACAAACATCACATTTCGGGATAGAGTaGTCACATCAGGTGCCTTGTGCAAAGCTTCAGCTGCAGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: KFPPGRRQTSHFGIE*SHQVPCAKLQLQPA Trigger: AGCTGGCTGCAGCTGAAGCTTTGCACAAGGCACCTGATGTGACCACTCTATCCCGAAATGTGATGTTTGTCTTCTTCCAGGGGGAAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | GTGATGAACTCAAGCTCTTTGCTGGCAATTAGGAATATCCGAGCTTaGATGTCTTTCCAGCGGCTCTCCGCCCACGTAGAGTATTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: VMNSSSLLAIRNIRA*MSFQRLSAHVEYSV Trigger: CACAGAATACTCTACGTGGGCGGAGAGCCGCTGGAAAGACATCCAAGCTCGGATATTCCTAATTGCCAGCAAAGAGCTTGAGTTCATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR GCA 90 bp | CTTCATAAGCCAAGCCGTTGCCCAGTTCATTCCACAGTGTTTTCTTaGAGTGAGCAAACTCTGGCCCGTAGGAGTTGGAGTAAATACCAA | + |
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Preference number: 1 (lower is better) Translates to: LHKPSRCPVHSTVFS*SEQTLARRSWSKYQ Trigger: TTGGTATTTACTCCAACTCCTACGGGCCAGAGTTTGCTCACTGCAAGAAAACACTGTGGAATGAACTGGGCAACGGCTTGGCTTATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR GCA 90 bp | GCACGGGAAACTTGCCGTTCTCCATATCATAGACCATCCGTGAGCTaGCAATGTAGTCAAAAGTTTCCCCCTGGAAGAAGACAAACATCA | + |
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Preference number: 1 (lower is better) Translates to: ARETCRSPYHRPSVS*QCSQKFPPGRRQTS Trigger: TGATGTTTGTCTTCTTCCAGGGGGAAACTTTTGACTACATTGGCAGCTCACGGATGGTCTATGATATGGAGAACGGCAAGTTTCCCGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR GCA 90 bp | TGGAATTCCAAGGGCCTTGTACCCACGAGTATTCATATAAATCCTTaGTCTCATTTGGGACTTTACTTGGATCCTGGCACTGCTCTCGGG | + |
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Preference number: 1 (lower is better) Translates to: WNSKGLVPTSIHINP*SHLGLYLDPGTALG Trigger: CCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAATGAGAGCAAGGATTTATATGAATACTCGTGGGTACAAGGCCCTTGGAATTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | CCATCGGTCAACACCCACTTCAGGTCTTCTTCTTTCTCCACTACATaGATAACCCCTGTATCCCCACTAATTGAAGCTGAACTGACTGTG | + |
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Preference number: 1 (lower is better) Translates to: PSVNTHFRSSSFSTT*ITPVSPLIEAELTV Trigger: CACAGTCAGTTCAGCTTCAATTAGTGGGGATACAGGGGTTATCCATGTAGTGGAGAAAGAAGAAGACCTGAAGTGGGTGTTGACCGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140643.8 |
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| 3UTR CCA 90 bp | GTTGCCCAGTTCATTCCACAGTGTTTTCTTGCAGTGAGCAAACTCTaGCCCGTAGGAGTTGGAGTAAATACCAAACCCATCATTTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: VAQFIPQCFLAVSKL*PVGVGVNTKPIIWA Trigger: TGCCCAAATGATGGGTTTGGTATTTACTCCAACTCCTACGGGCCAGAGTTTGCTCACTGCAAGAAAACACTGTGGAATGAACTGGGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | TATTCATATAAATCCTTGCTCTCATTTGGGACTTTACTTGGATCCTaGCACTGCTCTCGGGTGAGGTTGGTCGCCTTGCCAGTCAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: YSYKSLLSFGTLLGS*HCSRVRLVALPVRF Trigger: AAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAATGAGAGCAAGGATTTATATGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR TCA 90 bp | GTGGCCAGAAGATCCTCCACCTGGTTTTTCACAGACTCATTTTTCTaGGACATGGGATCTGTGTGCATCCAGAGATCTAGTGAAGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: VARRSSTWFFTDSFF*DMGSVCIQRSSEVL Trigger: AAGAACTTCACTAGATCTCTGGATGCACACAGATCCCATGTCTCAGAAAAATGAGTCTGTGAAAAACCAGGTGGAGGATCTTCTGGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CCA 90 bp | GAAGATCCTCCACCTGGTTTTTCACAGACTCATTTTTCTGAGACATaGGATCTGTGTGCATCCAGAGATCTAGTGAAGTTCTTAGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: EDPPPGFSQTHFSET*DLCASRDLVKFLGP Trigger: TGGCCCTAAGAACTTCACTAGATCTCTGGATGCACACAGATCCCATGTCTCAGAAAAATGAGTCTGTGAAAAACCAGGTGGAGGATCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGGGAAGGGCCTGGGACTaGGCCAGTCTCCTCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: TPSSWCSRWLNMGEGCRVGRAWD*ASLLRT Trigger: TGTCCTGAGGAGACTGGCCCAGTCCCAGGCCCTTCC...CACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR GCA 90 bp | ACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGTGCAAGCTCATACAGTaGACGCGCCAGCACTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: TPSSWCSRWLNMGEGCRVCKLIQ*TRQHCG Trigger: GCCACAGTGCTGGCGCGTGCACTGTATGAGCTTGCA...CACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR TCA 90 bp | GCCACCTGTCCCAGCTCCACGAAGGAGTCAATGTTCTCGAGCCGCACGGGAAACCCGCAACCACAACCCTaGCGTCAGGTTCTAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ATCPSSTKESMFSSRTGNPQPQP*RQVLVP Trigger: TGGGACTAGAACCTGACGTCAGGGTTGTGGTTGCGG...GTTTCCCGTGCGGCTCGAGAACATTGACTCCTTCGTGGAGCTGGGACAGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGGAGGGGTGTCGGGTGACAGTGGAGTCAGAGGGCAGTACAGGGCAGGATAGGAGGGTGGGTAACTaGGGAGTTAGGAGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: MGEGCRVTVESEGSTGQDRRVGN*GVRSSK Trigger: CTTGCTGCTCCTAACTCCCCAGTTACCCACCCTCCT...ATCCTGCCCTGTACTGCCCTCTGACTCCACTGTCACCCGACACCCCTCCCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGTGGAAGGAGCCAGAGTaGTCAGCCAGGACCACGCCA | + |
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Preference number: 2 (lower is better) Translates to: YRAGWKDRRYPEKGQRRVWKEPE*SARTTP Trigger: TGGCGTGGTCCTGGCTGACCACTCTGGCTCCTTCCA...CACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CAA 90 bp | TCATACAGTGCACGCGCCAGCACTGTGGCCACATTCGCCAGTGCCTaGGCAGTGTCTGTCACAAAGTTGAGGTCCTCTTCTGGGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SYSARASTVATFASA*AVSVTKLRSSSGLC Trigger: GCAGAGCCCAGAAGAGGACCTCAACTTTGTGACAGACACTGCCAAGGCACTGGCGAATGTGGCCACAGTGCTGGCGCGTGCACTGTATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAGACACTGGCTCAGCCAGGGAATCCATTTCTTCCCTAAGGGTTCAGGGTGGGAGGGGTGTCGGGTaGCAGTGGAGTCAGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ERDTGSARESISSLRVQGGRGVG*QWSQRA Trigger: TGCCCTCTGACTCCACTGTCACCCGACACCCCTCCC...ACCCTGAACCCTTAGGGAAGAAATGGATTCCCTGGCTGAGCCAGTGTCTCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGATCTGTGTGCATCCAGAGATCTAGTGAAGTTCTTAGGGCCACCTGTCCCAGGGAGGGGTGTCGGGTaGCAGTGGAGTCAGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WDLCASRDLVKFLGPPVPGRGVG*QWSQRA Trigger: TGCCCTCTGACTCCACTGTCACCCGACACCCCTCCC...TGGGACAGGTGGCCCTAAGAACTTCACTAGATCTCTGGATGCACACAGATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAGAGACGAAGGTGGAAGGGCCTGGGACTGGGCCAGTCTCCTCAGGACAACTAGGAGGGTGGGTAACTaGGGAGTTAGGAGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: CRDEGGRAWDWASLLRTTRRVGN*GVRSSK Trigger: CTTGCTGCTCCTAACTCCCCAGTTACCCACCCTCCT...AGTTGTCCTGAGGAGACTGGCCCAGTCCCAGGCCCTTCCACCTTCGTCTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGATCCTGGCACTGCTCTCGGGTGAGGTTGGTCGCCTTGCCAGTCAGGTTTAAGGGCAGAGGAGGGTaGGTAACTGGGGAGTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LGSWHCSRVRLVALPVRFKGRGG*VTGELG Trigger: TCCTAACTCCCCAGTTACCCACCCTCCTCTGCCCTT...AAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTCTCGGGGAGCAACGAAAAGGACGTCGGCTTTGGCATTGATGCAGTAGGTTGGCCAGTCGCACTGTaGAGCGCACACACTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: WLSGSNEKDVGFGIDAVGWPVAL*SAHTVG Trigger: TCCCACAGTGTGTGCGCTCCACAGTGCGACTGGCCA...ACCTACTGCATCAATGCCAAAGCCGACGTCCTTTTCGTTGCTCCCCGAGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR CAA 90 bp | AGACGTGTAACTGTCTGGGGATCAGCCTGGATGGAGCTGCTGAAGTaGGTTCCTCCTGCAAGCTCATACAGTGCACGCGCCAGCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: RRVTVWGSAWMELLK*VPPASSYSARASTV Trigger: CACAGTGCTGGCGCGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGGCTGATCCCCAGACAGTTACACGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCACATTCCAGAAAAAGGACCGGCTATCCAGCCGTGTGGCCGCAACCACAGCCTTGAATTTGCAGTaGTCCTCCTGCCTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GATFQKKDRLSSRVAATTALNLQ*SSCLCF Trigger: AAAGCAGAGGCAGGAGGATCACTGCAAATTCAAGGC...TGTGGTTGCGGCCACACGGCTGGATAGCCGGTCCTTTTTCTGGAATGTGGCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140643.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCGCACACACTGTGGGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCCTTCCTGGATGGAGCTGCTaGAGTTGGTTCCTCCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: WSAHTVGASLSCWNSKGLPGWSC*SWFLLQ Trigger: TTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGG...AAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCCCACAGTGTGTGCGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCACTGCTCTCGGGTGAGGTTGGTCGCCTTGCCAGTCAGGTTTGCCAAGGCGTCCACAGTGTTTTCTTaGAGTGAGCAAACTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: WHCSRVRLVALPVRFAKASTVFS*SEQTLA Trigger: GGCCAGAGTTTGCTCACTGCAAGAAAACACTGTGGA...CGCCTTGGCAAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGCTGCTGAAGTTGGTTCCTCCTGCAAGCTCATACAGTGCACGCGCCAGCAAGGGCAGAGGAGGGTaGGTAACTGGGGAGTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: MELLKLVPPASSYSARASKGRGG*VTGELG Trigger: TCCTAACTCCCCAGTTACCCACCCTCCTCTGCCCTT...GCTGGCGCGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTCAGCAGCTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGATCCTGGCACTGCTCTCGGGTGAGGTTGGTCGCCTTGCCAGTCAGGTTTCAGTACAGGGCAGGATaGAAGGACAGAAGGTATCCC | + |
|
Preference number: 2 (lower is better) Translates to: LGSWHCSRVRLVALPVRFQYRAG*KDRRYP Trigger: GGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTG...AAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTTGGTTCCTCCTGCAAGCTCATACAGTGCACGCGCCAGCACTGTGGCCACGCAGTGAGCAAACTCTaGCCCGTAGGAGTTGGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: EVGSSCKLIQCTRQHCGHAVSKL*PVGVGV Trigger: TACTCCAACTCCTACGGGCCAGAGTTTGCTCACTGC...GTGGCCACAGTGCTGGCGCGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CAA 90 bp | TCATTTGGGACTTTACTTGGATCCTGGCACTGCTCTCGGGTGAGGTaGGTCGCCTTGCCAGTCAGGTTTGCCAAGGCGTACTGCACAACG | + |
|
Preference number: 2 (lower is better) Translates to: SFGTLLGSWHCSRVR*VALPVRFAKAYCTT Trigger: CGTTGTGCAGTACGCCTTGGCAAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGCCAGAGACAGTCCAGTaGCAAATTAGTGGTTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: TPSSWCSRWLNMGEGCRVPETVQ*QISGLF Trigger: GAACAAACCACTAATTTGTCACTGGACTGTCTCTGG...CACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCAGTCGCACTGTGGAGCGCACACACTGTGGGAGCCTCTCTGTCCTGTTGGATCATAGACCATCCGTaGGCTGCCAATGTAGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: WPVALWSAHTVGASLSCWIIDHP*AANVVK Trigger: TTTGACTACATTGGCAGCTCACGGATGGTCTATGAT...CCAACAGGACAGAGAGGCTCCCACAGTGTGTGCGCTCCACAGTGCGACTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGGTGCCCACACTAACATaGCATCTGCACACCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: YRAGWKDRRYPEKGQRRVVPTLT*HLHTWR Trigger: TCTCCAGGTGTGCAGATGGCATGTTAGTGTGGGCAC...CACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGCGCACACACTGTGGGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCCTTGTTGAGGTCCTCTTCTaGGCTCTGCCACTCAGGATA | + |
|
Preference number: 2 (lower is better) Translates to: WSAHTVGASLSCWNSKGLVEVLF*ALPLRI Trigger: TATCCTGAGTGGCAGAGCCCAGAAGAGGACCTCAAC...AAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCCCACAGTGTGTGCGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCACACACTGTGGGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCCTTGTACCAGACGTGTAACTGTCTaGGGATCAGCCTGGATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RTHCGSLSVLLEFQGPCTRRVTV*GSAWME Trigger: CTCCATCCAGGCTGATCCCCAGACAGTTACACGTCT...GGTACAAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCCCACAGTGTGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCACAGACGATTTCTGGGTTGATGCTGAAGGTGCTCTGGATGAAGCTGCGCACACCCTCTTCCTGGTaGAGCAGGTGGCTGAATATG | + |
|
Preference number: 2 (lower is better) Translates to: GSQTISGLMLKVLWMKLRTPSSW*SRWLNM Trigger: CATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGT...GCGCAGCTTCATCCAGAGCACCTTCAGCATCAACCCAGAAATCGTCTGTGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTGTCTGGGGATCAGCCTGGATGGAGCTGCTGAAGTTGGTTCCTCCTGCAAGGCAGTGAGCAAACTCTaGCCCGTAGGAGTTGGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: NCLGISLDGAAEVGSSCKAVSKL*PVGVGV Trigger: TACTCCAACTCCTACGGGCCAGAGTTTGCTCACTGC...CTTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGGCTGATCCCCAGACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAGTCAGAGGGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAACACAATGGGAAGCTTaGTGCAGAGCCATTCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: VESEGSTGQDGRTEGIPRTQWEA*CRAILT Trigger: GGTCAGAATGGCTCTGCACCAAGCTTCCCATTGTGT...TCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCCCTCTGACTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGCATCCAGAGATCTAGTGAAGTTCTTAGGGCCACCTGTCCCAGCTCCACGAGACCAAGCTGGCCTTaGATTTGCAGTGATCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VCIQRSSEVLRATCPSSTRPSWP*ICSDPP Trigger: AGGAGGATCACTGCAAATTCAAGGCCAGCTTGGTCT...CGTGGAGCTGGGACAGGTGGCCCTAAGAACTTCACTAGATCTCTGGATGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140643.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGATCTGTGTGCATCCAGAGATCTAGTGAAGTTCTTAGGGCCACCTGTCCCAGACGGCGTGCATGTGTaGGAAGAGCTGCATAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: WDLCASRDLVKFLGPPVPDGVHV*EELHST Trigger: TGTGCTATGCAGCTCTTCTCACACATGCACGCCGTC...TGGGACAGGTGGCCCTAAGAACTTCACTAGATCTCTGGATGCACACAGATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGAGACGAAGGTGGAAGGGCCTGGGACTGGGCCAGTCTCCTCAGGACAACTATCATAGACCATCCGTaGGCTGCCAATGTAGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: CRDEGGRAWDWASLLRTTIIDHP*AANVVK Trigger: TTTGACTACATTGGCAGCTCACGGATGGTCTATGAT...AGTTGTCCTGAGGAGACTGGCCCAGTCCCAGGCCCTTCCACCTTCGTCTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTGTCACAAAGTTGAGGTCCTCTTCTGGGCTCTGCCACTCAGGATAGGTCACACACCCTCTTCCTGGTaGAGCAGGTGGCTGAATATG | + |
|
Preference number: 2 (lower is better) Translates to: VCHKVEVLFWALPLRIGHTPSSW*SRWLNM Trigger: CATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGT...GTGACCTATCCTGAGTGGCAGAGCCCAGAAGAGGACCTCAACTTTGTGACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | GGATCTGTGTGCATCCAGAGATCTAGTGAAGTTCTTAGGGCCACCTGTCCCAGCGTGCCCACACTAACATaGCATCTGCACACCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSVCIQRSSEVLRATCPSVPTLT*HLHTWR Trigger: TCTCCAGGTGTGCAGATGGCATGTTAGTGTGGGCAC...GCTGGGACAGGTGGCCCTAAGAACTTCACTAGATCTCTGGATGCACACAGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTCTGGGCTCTGCCACTCAGGATAGGTCACATTAATGTTCTCAGCCGTGTCAGGAGGGTGGGTAACTaGGGAGTTAGGAGCAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LFWALPLRIGHINVLSRVRRVGN*GVRSSK Trigger: CTTGCTGCTCCTAACTCCCCAGTTACCCACCCTCCT...GACACGGCTGAGAACATTAATGTGACCTATCCTGAGTGGCAGAGCCCAGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTACCAAACCCATCATTTaGGCACTGCACACTAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VQGRMEGQKVSRERAEEGTKPII*ALHTRR Trigger: TCTCCTAGTGTGCAGTGCCCAAATGATGGGTTTGGT...ACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CAA 90 bp | TTTGGGCACTGCACACTAGGAGAGAAGCTTGAAGTTGAGTTGGGCTaGGCTAGAGTCACGGCAAGACCAGCGATTCTACTGGTTGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: FGHCTLGEKLEVELG*ARVTARPAILLVVP Trigger: GGGAACAACCAGTAGAATCGCTGGTCTTGCCGTGACTCTAGCCAAGCCCAACTCAACTTCAAGCTTCTCTCCTAGTGTGCAGTGCCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR TCA 90 bp | CGCACACACTGTGGGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCCTTGTACCACAGACTCATTTTTCTaGGACATGGGATCTGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RTHCGSLSVLLEFQGPCTTDSFF*DMGSVC Trigger: GCACACAGATCCCATGTCTCAGAAAAATGAGTCTGT...GGTACAAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCCCACAGTGTGTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAATGCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGGCCGGACACCTGGTCTaGGAAGTAAAGTTCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LNADAQSFTPSSWCSRWLAGHLV*EVKFRA Trigger: TGCTCTGAACTTTACTTCCCAGACCAGGTGTCCGGC...CAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCCTTGTACCCACGAGTATTCATCAGTACAGGGCAGGATaGAAGGACAGAAGGTATCCC | + |
|
Preference number: 2 (lower is better) Translates to: GASLSCWNSKGLVPTSIHQYRAG*KDRRYP Trigger: GGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTG...ATGAATACTCGTGGGTACAAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCTAGTGAAGTTCTTAGGGCCACCTGTCCCAGCTCCACGAAGGAGTCAATGTTTCACACCCTCTTCCTaGTGCAGCAGGTGGCTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: DLVKFLGPPVPAPRRSQCFTPSS*CSRWLN Trigger: ATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAA...ACATTGACTCCTTCGTGGAGCTGGGACAGGTGGCCCTAAGAACTTCACTAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCCAGAGATGTTTCGAGCCCGAAGAAATCGTTGTAGAGACGAAGGTGGAAGGGAGCACTTTCAGCCCCTaGGGCCACATTCCAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RQRCFEPEEIVVETKVEGSTFSP*GHIPEK Trigger: TTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGTGCT...CCCTTCCACCTTCGTCTCTACAACGATTTCTTCGGGCTCGAAACATCTCTGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CAA 90 bp | CCATCATTTGGGCACTGCACACTAGGAGAGAAGCTTGAAGTTGAGTaGGGCTTGGCTAGAGTCACGGCAAGACCAGCGATTCTACTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: PSFGHCTLGEKLEVE*GLARVTARPAILLV Trigger: AACCAGTAGAATCGCTGGTCTTGCCGTGACTCTAGCCAAGCCCAACTCAACTTCAAGCTTCTCTCCTAGTGTGCAGTGCCCAAATGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CAA 90 bp | ACAAGGGTGCTGAAGCCCACGATCAGCGTGATGAACTCAAGCTCTTaGCTGGCAATTAGGAATATCCGAGCTTGGATGTCTTTCCAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: TRVLKPTISVMNSSS*LAIRNIRAWMSFQR Trigger: CCGCTGGAAAGACATCCAAGCTCGGATATTCCTAATTGCCAGCAAAGAGCTTGAGTTCATCACGCTGATCGTGGGCTTCAGCACCCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTCGCCTTGCCAGTCAGGTTTGCCAAGGCGTACTGCACAACGTAAGTCGTGTTGACATGGGATCTGTGTaGATCCAGAGATCTAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GRLASQVCQGVLHNVSRVDMGSV*IQRSSE Trigger: TTCACTAGATCTCTGGATGCACACAGATCCCATGTC...AACACGACTTACGTTGTGCAGTACGCCTTGGCAAACCTGACTGGCAAGGCGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCAAGCTCTTTGCTGGCAATTAGGAATATCCGAGCTTGGATGTCTTTCCAGCTGCAAGCTCATACAGTaGACGCGCCAGCACTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TQALCWQLGISELGCLSSCKLIQ*TRQHCG Trigger: GCCACAGTGCTGGCGCGTGCACTGTATGAGCTTGCA...GCTGGAAAGACATCCAAGCTCGGATATTCCTAATTGCCAGCAAAGAGCTTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCCTTGTACCCACGAGTATTCATGAAGTTGGTTCCTCCTaGAAGCTCATACAGTGCACG | + |
|
Preference number: 2 (lower is better) Translates to: GASLSCWNSKGLVPTSIHEVGSS*KLIQCT Trigger: CGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTC...ATGAATACTCGTGGGTACAAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCTAGTGAAGTTCTTAGGGCCACCTGTCCCAGCTCCACGAAGGAGTCAATGTAGCACTTTCAGCCCCTaGGGCCACATTCCAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: DLVKFLGPPVPAPRRSQCSTFSP*GHIPEK Trigger: TTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGTGCT...ACATTGACTCCTTCGTGGAGCTGGGACAGGTGGCCCTAAGAACTTCACTAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCACACACTGTGGGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCCTTGTACCCATTTTTCTGAGACATaGGATCTGTGTGCATCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RTHCGSLSVLLEFQGPCTHFSET*DLCASR Trigger: TCTGGATGCACACAGATCCCATGTCTCAGAAAAATG...GGTACAAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCCCACAGTGTGTGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAGAGATCTAGTGAAGTTCTTAGGGCCACCTGTCCCAGCTCCACGAAGGAGCCAGAGACAGTCCAGTaGCAAATTAGTGGTTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: IQRSSEVLRATCPSSTKEPETVQ*QISGLF Trigger: GAACAAACCACTAATTTGTCACTGGACTGTCTCTGG...CTCCTTCGTGGAGCTGGGACAGGTGGCCCTAAGAACTTCACTAGATCTCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAAGCTCTTTGCTGGCAATTAGGAATATCCGAGCTTGGATGTCTTTCCAGCGACGGCGTGCATGTGTaGGAAGAGCTGCATAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: TQALCWQLGISELGCLSSDGVHV*EELHST Trigger: TGTGCTATGCAGCTCTTCTCACACATGCACGCCGTC...GCTGGAAAGACATCCAAGCTCGGATATTCCTAATTGCCAGCAAAGAGCTTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGTTCAGGGTAGTTGAATaGAGATGCACAATCTTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: RAVQGRMEGQKVSRERAEFRVVE*RCTIFH Trigger: GTGAAAGATTGTGCATCTGCATTCAACTACCCTGAA...CTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | AACCCATCATTTGGGCACTGCACACTAGGAGAGAAGCTTGAAGTTGAGTTGGGCCTGCTTTCCAAGTCCTaGGATTCAAGGCCACCACAT | + |
|
Preference number: 2 (lower is better) Translates to: NPSFGHCTLGEKLEVELGLLSKS*DSRPPH Trigger: ATGTGGTGGCCTTGAATCGCAGGACTTGGAAAGCAG...GCCCAACTCAACTTCAAGCTTCTCTCCTAGTGTGCAGTGCCCAAATGATGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140643.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGAGGGAGAAGACAAGGGTGCTGAAGCCCACGATCAGCGTGATGAACTCAAGATGTGTGAGAAGAGCTaGATAGCACACAATGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: DEGEDKGAEAHDQRDELKMCEKS*IAHNGK Trigger: CTTCCCATTGTGTGCTATGCAGCTCTTCTCACACAT...CTTGAGTTCATCACGCTGATCGTGGGCTTCAGCACCCTTGTCTTCTCCCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAAGAAGACAAACATCACATTTCGGGATAGAGTGGTCACATCAGGTGCCTTGTGTGCTGATGACGGCGTaGATGTGTGAGAAGAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GRRQTSHFGIEWSHQVPCVLMTA*MCEKSC Trigger: GCAGCTCTTCTCACACATGCACGCCGTCATCAGCAC...ACAAGGCACCTGATGTGACCACTCTATCCCGAAATGTGATGTTTGTCTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCTAGTGAAGTTCTTAGGGCCACCTGTCCCAGCTCCACGAAGGAGTCAATGTACCAAACCCATCATTTaGGCACTGCACACTAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: DLVKFLGPPVPAPRRSQCTKPII*ALHTRR Trigger: TCTCCTAGTGTGCAGTGCCCAAATGATGGGTTTGGT...ACATTGACTCCTTCGTGGAGCTGGGACAGGTGGCCCTAAGAACTTCACTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTCTTCTGGGCTCTGCCACTCAGGATAGGTCACATTAATGTTCTCAGCCGTGTCACAGACGATTTCTaGGTTGATGCTGAAGGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VLFWALPLRIGHINVLSRVTDDF*VDAEGA Trigger: AGCACCTTCAGCATCAACCCAGAAATCGTCTGTGAC...ACGGCTGAGAACATTAATGTGACCTATCCTGAGTGGCAGAGCCCAGAAGAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTCTCGGGGAGCAACGAAAAGGACGTCGGCTTTGGCATTGATGCAGTAGGTCATTTTTCTGAGACATaGGATCTGTGTGCATCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: WLSGSNEKDVGFGIDAVGHFSET*DLCASR Trigger: TCTGGATGCACACAGATCCCATGTCTCAGAAAAATG...ACCTACTGCATCAATGCCAAAGCCGACGTCCTTTTCGTTGCTCCCCGAGAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTGGGGATCAGCCTGGATGGAGCTGCTGAAGTTGGTTCCTCCTGCAAGCTCAAGAAGATCCTCCACCTaGTTTTTCACAGACTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: VWGSAWMELLKLVPPASSRRSST*FFTDSF Trigger: AAATGAGTCTGTGAAAAACCAGGTGGAGGATCTTCT...TGAGCTTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGGCTGATCCCCAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAGACACTGGCTCAGCCAGGGAATCCATTTCTTCCCTAAGGGTTCAGGGTCCAGAGACAGTCCAGTaGCAAATTAGTGGTTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ERDTGSARESISSLRVQGPETVQ*QISGLF Trigger: GAACAAACCACTAATTTGTCACTGGACTGTCTCTGG...ACCCTGAACCCTTAGGGAAGAAATGGATTCCCTGGCTGAGCCAGTGTCTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTCTTCTGGGCTCTGCCACTCAGGATAGGTCACATTAATGTTCTCAGCCGTACAGACTCATTTTTCTaGGACATGGGATCTGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: VLFWALPLRIGHINVLSRTDSFF*DMGSVC Trigger: GCACACAGATCCCATGTCTCAGAAAAATGAGTCTGT...ACGGCTGAGAACATTAATGTGACCTATCCTGAGTGGCAGAGCCCAGAAGAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCAAGCTCTTTGCTGGCAATTAGGAATATCCGAGCTTGGATGTCTTTCCAGCACATCAGGTGCCTTGTaGAAAGCTTCAGCTGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: TQALCWQLGISELGCLSSTSGAL*KASAAA Trigger: GGCTGCAGCTGAAGCTTTGCACAAGGCACCTGATGT...GCTGGAAAGACATCCAAGCTCGGATATTCCTAATTGCCAGCAAAGAGCTTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | AGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGTCTTTCTCCACTACATaGATAACCCCTGTATCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RCTIFHTLFLVQQVAEYGSFSTT*ITPVSP Trigger: TGGGGATACAGGGGTTATCCATGTAGTGGAGAAAGA...CCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140643.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGTAAAGTTCAGAGCAGGCAGGGAGAGCTAGAGTCCTCTTCAGTAAGACACCTGGCCCGTAGGAGTTaGAGTAAATACCAAACCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GSKVQSRQGELESSSVRHLARRS*SKYQTH Trigger: ATGGGTTTGGTATTTACTCCAACTCCTACGGGCCAG...GTGTCTTACTGAAGAGGACTCTAGCTCTCCCTGCCTGCTCTGAACTTTACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CAA 90 bp | CAATGGGAAGCTTGGTGCAGAGCCATTCTGACCCAGGTTGTGATCTaGATAGCACTGCTTGATGACCTTGGTTTCGTTCTCATCTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: QWEAWCRAILTQVVI*IALLDDLGFVLIFK Trigger: CTTGAAGATGAGAACGAAACCAAGGTCATCAAGCAGTGCTATCAAGATCACAACCTGGGTCAGAATGGCTCTGCACCAAGCTTCCCATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCCTCTTCTGGGCTCTGCCACTCAGGATAGGTCACATTAATGTTCTCAGCCGTAGACCATCCGTGAGCTaGCAATGTAGTCAAAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VLFWALPLRIGHINVLSRRPSVS*QCSQKF Trigger: AAACTTTTGACTACATTGGCAGCTCACGGATGGTCT...ACGGCTGAGAACATTAATGTGACCTATCCTGAGTGGCAGAGCCCAGAAGAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTCAGCCGTGTCATAAATGCTCTGGTAATACCGATTGTGGAAGGAGCCAGACTGGCCCGTAGGAGTTaGAGTAAATACCAAACCCAT | + |
|
Preference number: 2 (lower is better) Translates to: VLSRVINALVIPIVEGARLARRS*SKYQTH Trigger: ATGGGTTTGGTATTTACTCCAACTCCTACGGGCCAG...TCTGGCTCCTTCCACAATCGGTATTACCAGAGCATTTATGACACGGCTGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CAA 90 bp | TTGGAATTCCAAGGGCCTTGTACCCACGAGTATTCATATAAATCCTaGCTCTCATTTGGGACTTTACTTGGATCCTGGCACTGCTCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: LEFQGPCTHEYSYKS*LSFGTLLGSWHCSR Trigger: CCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAATGAGAGCAAGGATTTATATGAATACTCGTGGGTACAAGGCCCTTGGAATTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAAGGGCCTTGTACCCACGAGTATTCATATAAATCCTTGCTCTCATTTGGGGTGCAAAGCTTCAGCTaGAGCCAGCTGAGTGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: FQGPCTHEYSYKSLLSFGVQSFS*SQLSDK Trigger: TTTGTCACTCAGCTGGCTGCAGCTGAAGCTTTGCAC...CCCAAATGAGAGCAAGGATTTATATGAATACTCGTGGGTACAAGGCCCTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCACATTAATGTTCTCAGCCGTGTCATAAATGCTCTGGTAATACCGATTGTGGCCGGACACCTGGTCTaGGAAGTAAAGTTCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GHINVLSRVINALVIPIVAGHLV*EVKFRA Trigger: TGCTCTGAACTTTACTTCCCAGACCAGGTGTCCGGC...CACAATCGGTATTACCAGAGCATTTATGACACGGCTGAGAACATTAATGTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCACGATCAGCGTGATGAACTCAAGCTCTTTGCTGGCAATTAGGAATATCGTCACAGACGATTTCTaGGTTGATGCTGAAGGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KPTISVMNSSSLLAIRNIVTDDF*VDAEGA Trigger: AGCACCTTCAGCATCAACCCAGAAATCGTCTGTGAC...GATATTCCTAATTGCCAGCAAAGAGCTTGAGTTCATCACGCTGATCGTGGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTCTTCTGGGCTCTGCCACTCAGGATAGGTCACATTAATGTTCTCAGCCGTAGAAGATCCTCCACCTaGTTTTTCACAGACTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: VLFWALPLRIGHINVLSRRRSST*FFTDSF Trigger: AAATGAGTCTGTGAAAAACCAGGTGGAGGATCTTCT...ACGGCTGAGAACATTAATGTGACCTATCCTGAGTGGCAGAGCCCAGAAGAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCATCCAAATAGGACCTTAGGTCATGTTTCAAGATCGACTGAAACCATGAGTGTGCAAAGCTTCAGCTaGAGCCAGCTGAGTGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: CHPNRTLGHVSRSTETMSVQSFS*SQLSDK Trigger: TTTGTCACTCAGCTGGCTGCAGCTGAAGCTTTGCAC...ACTCATGGTTTCAGTCGATCTTGAAACATGACCTAAGGTCCTATTTGGATGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCATCCAAATAGGACCTTAGGTCATGTTTCAAGATCGACTGAAACCATGAGTGACATGGGATCTGTGTaGATCCAGAGATCTAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CHPNRTLGHVSRSTETMSDMGSV*IQRSSE Trigger: TTCACTAGATCTCTGGATGCACACAGATCCCATGTC...ACTCATGGTTTCAGTCGATCTTGAAACATGACCTAAGGTCCTATTTGGATGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | GGCCCTGGCCAGTCGCACTGTGGAGCGCACACACTGTaGGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GPGQSHCGAHTL*EPLCPVGIPRA Trigger: GGCCCTTGGAATTCCAACAGGACAGAGAGGCTCCCACAGTGTGTGCGCTCCACAGTGCGACTGGCCAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | TCCACTGACTCAGTTCAAAGGCAGGGGACAAGGCCCTaGCCAGTCGCACTGTGGAGCGCACACACTGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: STDSVQRQGTRP*PVALWSAHTVG Trigger: TCCCACAGTGTGTGCGCTCCACAGTGCGACTGGCCAGGGCCTTGTCCCCTGCCTTTGAACTGAGTCAGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR TCA 72 bp | CTCTCCGCCCACGTAGAGTATTCTGTGGAGCTCCACTaGCTCAGTTCAAAGGCAGGGGACAAGGCCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSAHVEYSVELH*LSSKAGDKALA Trigger: GGCCAGGGCCTTGTCCCCTGCCTTTGAACTGAGTCAGTGGAGCTCCACAGAATACTCTACGTGGGCGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR GCA 72 bp | GCTGCTGAAGTTGGTTCCTCCTGCAAGCTCATACAGTaGACGCGCCAGCACTGTGGCCACATTCGCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AAEVGSSCKLIQ*TRQHCGHIRQC Trigger: GCACTGGCGAATGTGGCCACAGTGCTGGCGCGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTCAGCAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | CTCCTGCAAGCTCATACAGTGCACGCGCCAGCACTGTaGCCACATTCGCCAGTGCCTTGGCAGTGTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLQAHTVHAPAL*PHSPVPWQCLS Trigger: TGACAGACACTGCCAAGGCACTGGCGAATGTGGCCACAGTGCTGGCGCGTGCACTGTATGAGCTTGCAGGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR GCA 72 bp | ATCAGCCTGGATGGAGCTGCTGAAGTTGGTTCCTCCTaGAAGCTCATACAGTGCACGCGCCAGCACTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ISLDGAAEVGSS*KLIQCTRQHCG Trigger: GCCACAGTGCTGGCGCGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGGCTGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | GGTGACAGTGGAGTCAGAGGGCAGTACAGGGCAGGATaGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GDSGVRGQYRAG*KDRRYPEKGQR Trigger: CCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCCCTCTGACTCCACTGTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCCACATTCCAGAAAAAGGACCGGCTATCCAGCCGTGTGGCCGCAACCACAGAGAGAAGCTTGAAGTaGAGTTGGGCTTGGCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GATFQKKDRLSSRVAATTERSLK*SWAWLE Trigger: CTCTAGCCAAGCCCAACTCAACTTCAAGCTTCTCTC...TGTGGTTGCGGCCACACGGCTGGATAGCCGGTCCTTTTTCTGGAATGTGGCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGAGACGAAGGTGGAAGGGCCTGGGACTGGGCCAGTCTCCTCAGGACAACTCAGACGATTTCTGGGTaGATGCTGAAGGTGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CRDEGGRAWDWASLLRTTQTISG*MLKVLW Trigger: CCAGAGCACCTTCAGCATCAACCCAGAAATCGTCTG...AGTTGTCCTGAGGAGACTGGCCCAGTCCCAGGCCCTTCCACCTTCGTCTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR TCA 72 bp | TTGGGACTTTACTTGGATCCTGGCACTGCTCTCGGGTaGGGTTGGTCGCCTTGCCAGTCAGGTTTGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGLYLDPGTALG*GWSPCQSGLPR Trigger: CCTTGGCAAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR GCA 72 bp | CTCTCGGGTGAGGTTGGTCGCCTTGCCAGTCAGGTTTaGCAAGGCGTACTGCACAACGTAAGTCGTGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSGEVGRLASQV*QGVLHNVSRVG Trigger: ACCAACACGACTTACGTTGTGCAGTACGCCTTGGCAAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGAGACGAAGGTGGAAGGGCCTGGGACTGGGCCAGTCTCCTCAGGACAACTCAGCGATTCTACTGGTaGTTCCCTTCAGCTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CRDEGGRAWDWASLLRTTQRFYW*FPSASP Trigger: TGGAGAAGCTGAAGGGAACAACCAGTAGAATCGCTG...AGTTGTCCTGAGGAGACTGGCCCAGTCCCAGGCCCTTCCACCTTCGTCTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGCAGACGATTTCTGGGTaGATGCTGAAGGTGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: YRAGWKDRRYPEKGQRRVQTISG*MLKVLW Trigger: CCAGAGCACCTTCAGCATCAACCCAGAAATCGTCTG...CACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGGGGATCAGCCTGGATGGAGCTGCTGAAGTTGGTTCCTCCTGCAAGCTCAGTCACATCAGGTGCCTaGTGCAAAGCTTCAGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VWGSAWMELLKLVPPASSVTSGA*CKASAA Trigger: TGCAGCTGAAGCTTTGCACAAGGCACCTGATGTGAC...TGAGCTTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGGCTGATCCCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR TCA 72 bp | CATTCGCCAGTGCCTTGGCAGTGTCTGTCACAAAGTTaGGGTCCTCTTCTGGGCTCTGCCACTCAGGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: HSPVPWQCLSQS*GPLLGSATQDR Trigger: CCTATCCTGAGTGGCAGAGCCCAGAAGAGGACCTCAACTTTGTGACAGACACTGCCAAGGCACTGGCGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR GCA 72 bp | GCAGTGCTGATGACGGCGTGCATGTGTGAGAAGAGCTaGATAGCACACAATGGGAAGCTTGGTGCAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AVLMTACMCEKS*IAHNGKLGAEP Trigger: TGGCTCTGCACCAAGCTTCCCATTGTGTGCTATGCAGCTCTTCTCACACATGCACGCCGTCATCAGCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR GCA 72 bp | TTGCTCTCATTTGGGACTTTACTTGGATCCTGGCACTaGTCTCGGGTGAGGTTGGTCGCCTTGCCAGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLSFGTLLGSWH*SRVRLVALPVR Trigger: CCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAATGAGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | CTGAGTGACAAAGGAGGCTACAGCACTTTCAGCCCCTaGGGCCACATTCCAGAAAAAGGACCGGCTATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSDKGGYSTFSP*GHIPEKGPAIQ Trigger: CTGGATAGCCGGTCCTTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGTGCTGTAGCCTCCTTTGTCACTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR GCA 72 bp | AGTGGTCACATCAGGTGCCTTGTGCAAAGCTTCAGCTaGAGCCAGCTGAGTGACAAAGGAGGCTACAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: SGHIRCLVQSFS*SQLSDKGGYST Trigger: AGTGCTGTAGCCTCCTTTGTCACTCAGCTGGCTGCAGCTGAAGCTTTGCACAAGGCACCTGATGTGACCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR GCA 72 bp | CGAAGGAGTCAATGTTCTCGAGCCGCACGGGAAACTTaGCGTTCTCCATATCATAGACCATCCGTGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RRSQCSRAARET*RSPYHRPSVSC Trigger: GCAGCTCACGGATGGTCTATGATATGGAGAACGGCAAGTTTCCCGTGCGGCTCGAGAACATTGACTCCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCGCAACCACAACCCTGACGTCAGGTTCTAGTCCCACAGATGTATTTATAGGCTCTCTGGTGAAGAGCTaGCCCTCCAGCAGAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: AATTTLTSGSSPTDVFIGSLVKS*PSSRTM Trigger: CATGGTTCTGCTGGAGGGCAAGCTCTTCACCAGAGA...GCCTATAAATACATCTGTGGGACTAGAACCTGACGTCAGGGTTGTGGTTGCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140643.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGTCTGGGGATCAGCCTGGATGGAGCTGCTGAAGTTGGTTCCTCCTGCAAGCAGCGATTCTACTGGTaGTTCCCTTCAGCTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: NCLGISLDGAAEVGSSCKQRFYW*FPSASP Trigger: TGGAGAAGCTGAAGGGAACAACCAGTAGAATCGCTG...CTTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGGCTGATCCCCAGACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAAGGCGTACTGCACAACGTAAGTCGTGTTGGTAGGGCTGGAGACGGCGATACCCAGGTTGTGATCTaGATAGCACTGCTTGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: CQGVLHNVSRVGRAGDGDTQVVI*IALLDD Trigger: GTCATCAAGCAGTGCTATCAAGATCACAACCTGGGT...ATCGCCGTCTCCAGCCCTACCAACACGACTTACGTTGTGCAGTACGCCTTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | TTGAATGCAGATGCACAATCTTTCACACCCTCTTCCTaGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LNADAQSFTPSS*CSRWLNMGEGC Trigger: ACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | AAATCCTTGCTCTCATTTGGGACTTTACTTGGATCCTaGCACTGCTCTCGGGTGAGGTTGGTCGCCTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KSLLSFGTLLGS*HCSRVRLVALP Trigger: TGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAATGAGAGCAAGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | TCAAGCTCTTTGCTGGCAATTAGGAATATCCGAGCTTaGATGTCTTTCCAGCGGCTCTCCGCCCACGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSLLAIRNIRA*MSFQRLSAHVE Trigger: CTCTACGTGGGCGGAGAGCCGCTGGAAAGACATCCAAGCTCGGATATTCCTAATTGCCAGCAAAGAGCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAATGCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGGAGAGAAGCTTGAAGTaGAGTTGGGCTTGGCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LNADAQSFTPSSWCSRWLERSLK*SWAWLE Trigger: CTCTAGCCAAGCCCAACTCAACTTCAAGCTTCTCTC...CAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | GCTTGGCTAGAGTCACGGCAAGACCAGCGATTCTACTaGTTGTTCCCTTCAGCTTCTCCATTACATCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AWLESRQDQRFY*LFPSASPLHLW Trigger: CCAGAGATGTAATGGAGAAGCTGAAGGGAACAACCAGTAGAATCGCTGGTCTTGCCGTGACTCTAGCCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140643.8 |
||
| 3UTR TCA 72 bp | GGGAAACTTGCCGTTCTCCATATCATAGACCATCCGTaGGCTGCCAATGTAGTCAAAAGTTTCCCCCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GKLAVLHIIDHP*AANVVKSFPLE Trigger: TTCCAGGGGGAAACTTTTGACTACATTGGCAGCTCACGGATGGTCTATGATATGGAGAACGGCAAGTTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | CTTGGCAGTGTCTGTCACAAAGTTGAGGTCCTCTTCTaGGCTCTGCCACTCAGGATAGGTCACATTAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGSVCHKVEVLF*ALPLRIGHINV Trigger: AACATTAATGTGACCTATCCTGAGTGGCAGAGCCCAGAAGAGGACCTCAACTTTGTGACAGACACTGCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAGGGCCTTGTACCCACGAGTATTCATATAAATCCTTGCTCTCATTTGGGGTCACATCAGGTGCCTaGTGCAAAGCTTCAGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FQGPCTHEYSYKSLLSFGVTSGA*CKASAA Trigger: TGCAGCTGAAGCTTTGCACAAGGCACCTGATGTGAC...CCCAAATGAGAGCAAGGATTTATATGAATACTCGTGGGTACAAGGCCCTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTCAGCCGTGTCATAAATGCTCTGGTAATACCGATTGTGGAAGGAGCCAGACACTGCTTGATGACCTaGGTTTCGTTCTCATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VLSRVINALVIPIVEGARHCLMT*VSFSSS Trigger: TGAAGATGAGAACGAAACCAAGGTCATCAAGCAGTG...TCTGGCTCCTTCCACAATCGGTATTACCAGAGCATTTATGACACGGCTGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR GCA 72 bp | ACTTGCCGTTCTCCATATCATAGACCATCCGTGAGCTaGCAATGTAGTCAAAAGTTTCCCCCTGGAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TCRSPYHRPSVS*QCSQKFPPGRR Trigger: TCTTCTTCCAGGGGGAAACTTTTGACTACATTGGCAGCTCACGGATGGTCTATGATATGGAGAACGGCAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR TCA 72 bp | AGGGAATCCATTTCTTCCCTAAGGGTTCAGGGTAGTTaGATGCAGATGCACAATCTTTCACACCCTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RESISSLRVQGS*MQMHNLSHPLP Trigger: AGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAACTACCCTGAACCCTTAGGGAAGAAATGGATTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | TTCATTCCACAGTGTTTTCTTGCAGTGAGCAAACTCTaGCCCGTAGGAGTTGGAGTAAATACCAAACCCATC | + |
|
Preference number: 3 (lower is better) Translates to: FIPQCFLAVSKL*PVGVGVNTKPI Trigger: GATGGGTTTGGTATTTACTCCAACTCCTACGGGCCAGAGTTTGCTCACTGCAAGAAAACACTGTGGAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR TCA 72 bp | AGATCCTCCACCTGGTTTTTCACAGACTCATTTTTCTaGGACATGGGATCTGTGTGCATCCAGAGATCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RSSTWFFTDSFF*DMGSVCIQRSS Trigger: ACTAGATCTCTGGATGCACACAGATCCCATGTCTCAGAAAAATGAGTCTGTGAAAAACCAGGTGGAGGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| 3UTR CCA 72 bp | AACACCCACTTCAGGTCTTCTTCTTTCTCCACTACATaGATAACCCCTGTATCCCCACTAATTGAAGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: NTHFRSSSFSTT*ITPVSPLIEAE Trigger: TTCAGCTTCAATTAGTGGGGATACAGGGGTTATCCATGTAGTGGAGAAAGAAGAAGACCTGAAGTGGGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140643.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGGGTAAAGACCCCGACTTCCTaGGTCAGGCCCAGAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQDGRTEGIPRKGRGGWVKTPTS*VRPRAA Trigger: GGCGGCTCTGGGCCTGACCCAGGAAGTCGGGGTCTT...TACCCACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCGCACACACTGTGGGAGCCTCTCTGTCCTGTTGGAATTCCAAGGGCCTTAAGACCCCGACTTCCTaGGTCAGGCCCAGAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: WSAHTVGASLSCWNSKGLKTPTS*VRPRAA Trigger: GGCGGCTCTGGGCCTGACCCAGGAAGTCGGGGTCTT...AAGGCCCTTGGAATTCCAACAGGACAGAGAGGCTCCCACAGTGTGTGCGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGACAGGGGACAAGGCCCTaGCCAGTCGCACTGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSTGQDGRTEGIPRKGRGQGTRP*PVALWS Trigger: GCTCCACAGTGCGACTGGCCAGGGCCTTGTCCCCTG...TCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| 3UTR CAA 72 bp | GGATCCTGGCACTGCTCTCGGGTGAGGTTGGTCGCCTaGCCAGTCAGGTTTGCCAAGGCGTACTGCACAACG | + |
|
Preference number: 4 (lower is better) Translates to: GSWHCSRVRLVA*PVRFAKAYCTT Trigger: CGTTGTGCAGTACGCCTTGGCAAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGAAGGGCCTGGGACTaGGCCAGTCTCCTCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AVQGRMEGQKVSRERAEEGRAWD*ASLLRT Trigger: TGTCCTGAGGAGACTGGCCCAGTCCCAGGCCCTTCC...CTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAAGGTGGAAGGGCCTaGGACTGGGCCAGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RAVQGRMEGQKVSRERAEEGGRA*DWASLL Trigger: GAGGAGACTGGCCCAGTCCCAGGCCCTTCCACCTTC...CTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | CTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGACAGTGGAGTCGCAGTGAGCAAACTCTaGCCCGTAGGAGTTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVQQVAEYGGGVSGDSGVAVSKL*PVGVGV Trigger: TACTCCAACTCCTACGGGCCAGAGTTTGCTCACTGC...GACTCCACTGTCACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | GTGGAGTCAGAGGGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGATGGAAGGAGCCAGAGTaGTCAGCCAGGACCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VESEGSTGQDGRTEGIPRWKEPE*SARTTP Trigger: TGGCGTGGTCCTGGCTGACCACTCTGGCTCCTTCCA...TCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCCCTCTGACTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | CTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGACAGTGGAGTCGTTGAGGTCCTCTTCTaGGCTCTGCCACTCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LVQQVAEYGGGVSGDSGVVEVLF*ALPLRI Trigger: TATCCTGAGTGGCAGAGCCCAGAAGAGGACCTCAAC...GACTCCACTGTCACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | CTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGACAGTGGAGTCAGACGTGTAACTGTCTaGGGATCAGCCTGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVQQVAEYGGGVSGDSGVRRVTV*GSAWME Trigger: CTCCATCCAGGCTGATCCCCAGACAGTTACACGTCT...GACTCCACTGTCACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGGGTAGGAGCGCACACACTGTaGGAGCCTCTCTGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GQDGRTEGIPRKGRGGWVGAHTL*EPLCPV Trigger: AACAGGACAGAGAGGCTCCCACAGTGTGTGCGCTCC...TACCCACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR TCA 90 bp | TACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGTCTGATGAGTGGCGTTaGGCAGGCGGACACAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YRAGWKDRRYPEKGQRRVSDEWR*AGGHKE Trigger: CTCCTTGTGTCCGCCTGCTCAACGCCACTCATCAGA...CACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR TCA 90 bp | CAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGCCGCAACCACAACCCTaGCGTCAGGTTCTAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSFTPSSWCSRWLNMGEGPQPQP*RQVLVP Trigger: TGGGACTAGAACCTGACGTCAGGGTTGTGGTTGCGG...CCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | TTGAATGCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAAGACCCCGACTTCCTaGGTCAGGCCCAGAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNADAQSFTPSSWCSRWLKTPTS*VRPRAA Trigger: GGCGGCTCTGGGCCTGACCCAGGAAGTCGGGGTCTT...CAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR CCA 90 bp | ACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGAGCACTTTCAGCCCCTaGGGCCACATTCCAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPSSWCSRWLNMGEGCRVSTFSP*GHIPEK Trigger: TTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGTGCT...CACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| 3UTR CAA 72 bp | ACTGTCTGGGGATCAGCCTGGATGGAGCTGCTGAAGTaGGTTCCTCCTGCAAGCTCATACAGTGCACGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVWGSAWMELLK*VPPASSYSARA Trigger: GGCGCGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGGCTGATCCCCAGACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR TCA 90 bp | CAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGCCTGGATGGAGCTGCTaGAGTTGGTTCCTCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSFTPSSWCSRWLNMGEGPGWSC*SWFLLQ Trigger: TTGCAGGAGGAACCAACTTCAGCAGCTCCATCCAGG...CCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR TCA 90 bp | GGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGATCTGTGGAGCTCCACTaGCTCAGTTCAAAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSTGQDGRTEGIPRKGRGSVELH*LSSKAG Trigger: CCCTGCCTTTGAACTGAGTCAGTGGAGCTCCACAGA...TCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR GCA 90 bp | CAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGGTGCTGATGACGGCGTaGATGTGTGAGAAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSFTPSSWCSRWLNMGEGVLMTA*MCEKSC Trigger: GCAGCTCTTCTCACACATGCACGCCGTCATCAGCAC...CCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | GGATACCCACTTAACAGCGTGCCCACACTAACATGCCATCTGCACACCTGGAGATGGCCAGTCGCACTGTaGAGCGCACACACTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYPLNSVPTLTCHLHTWRWPVAL*SAHTVG Trigger: TCCCACAGTGTGTGCGCTCCACAGTGCGACTGGCCA...TCTCCAGGTGTGCAGATGGCATGTTAGTGTGGGCACGCTGTTAAGTGGGTATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| 3UTR CAA 72 bp | ACTTTACTTGGATCCTGGCACTGCTCTCGGGTGAGGTaGGTCGCCTTGCCAGTCAGGTTTGCCAAGGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLGSWHCSRVR*VALPVRFAKAY Trigger: GTACGCCTTGGCAAACCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGTTTGTTCCCAGCCGGACACCTGGTCTGGGAAGTAAAGTTCAGAGCAGGCGACGGCGTGCATGTGTaGGAAGAGCTGCATAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SGLFPAGHLVWEVKFRAGDGVHV*EELHST Trigger: TGTGCTATGCAGCTCTTCTCACACATGCACGCCGTC...GCCTGCTCTGAACTTTACTTCCCAGACCAGGTGTCCGGCTGGGAACAAACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR GCA 90 bp | TACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGACATCAGGTGCCTTGTaGAAAGCTTCAGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YRAGWKDRRYPEKGQRRVTSGAL*KASAAA Trigger: GGCTGCAGCTGAAGCTTTGCACAAGGCACCTGATGT...CACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR GCA 90 bp | ACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGGACATGGGATCTGTGTaGATCCAGAGATCTAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPSSWCSRWLNMGEGCRVDMGSV*IQRSSE Trigger: TTCACTAGATCTCTGGATGCACACAGATCCCATGTC...CACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR TCA 90 bp | GCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGGGTAACGATTTTCCTCTCCACTaGGTTTCCCCCACACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: AGWKDRRYPEKGQRRVGNDFPLH*VSPTQS Trigger: GGATTGTGTGGGGGAAACTCAGTGGAGAGGAAAATC...GTTACCCACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGTGCAAAGCTTCAGCTaGAGCCAGCTGAGTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSTGQDGRTEGIPRKGRGVQSFS*SQLSDK Trigger: TTTGTCACTCAGCTGGCTGCAGCTGAAGCTTTGCAC...TCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR GCA 90 bp | GCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGCCGCACGGGAAACTTaGCGTTCTCCATATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVQGRMEGQKVSRERAEEAARET*RSPYHR Trigger: TCTATGATATGGAGAACGGCAAGTTTCCCGTGCGGC...CTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR GCA 90 bp | TTGAATGCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGTGCAAGCTCATACAGTaGACGCGCCAGCACTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNADAQSFTPSSWCSRWLCKLIQ*TRQHCG Trigger: GCCACAGTGCTGGCGCGTGCACTGTATGAGCTTGCA...CAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR GCA 90 bp | GCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGCTTGGATCCTGGCACTaGTCTCGGGTGAGGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ADAQSFTPSSWCSRWLNMLGSWH*SRVRLV Trigger: GACCAACCTCACCCGAGAGCAGTGCCAGGATCCAAG...CATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | TTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGACCAAACCCATCATTTaGGCACTGCACACTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FHTLFLVQQVAEYGGGVSTKPII*ALHTRR Trigger: TCTCCTAGTGTGCAGTGCCCAAATGATGGGTTTGGT...CGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | GTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTACACAATGGGAAGCTTaGTGCAGAGCCATTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VQGRMEGQKVSRERAEEGTQWEA*CRAILT Trigger: GGTCAGAATGGCTCTGCACCAAGCTTCCCATTGTGT...ACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | GCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGGGTAACCATTCGCCAGTGCCTTaGCAGTGTCTGTCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGWKDRRYPEKGQRRVGNHSPVP*QCLSQS Trigger: ACTTTGTGACAGACACTGCCAAGGCACTGGCGAATG...GTTACCCACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | CAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGAGGAATATCCGAGCTTaGATGTCTTTCCAGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSFTPSSWCSRWLNMGEGRNIRA*MSFQRL Trigger: GAGCCGCTGGAAAGACATCCAAGCTCGGATATTCCT...CCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| 3UTR CAA 72 bp | GGGCACTGCACACTAGGAGAGAAGCTTGAAGTTGAGTaGGGCTTGGCTAGAGTCACGGCAAGACCAGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: GHCTLGEKLEVE*GLARVTARPAI Trigger: AATCGCTGGTCTTGCCGTGACTCTAGCCAAGCCCAACTCAACTTCAAGCTTCTCTCCTAGTGTGCAGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGGGTAACAGACTCATTTTTCTaGGACATGGGATCTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQDGRTEGIPRKGRGGWVTDSFF*DMGSVC Trigger: GCACACAGATCCCATGTCTCAGAAAAATGAGTCTGT...TACCCACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | GCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGATTTGGGACTTTACTTaGATCCTGGCACTGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AVQGRMEGQKVSRERAEEIWDFT*ILALLS Trigger: CGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAAT...CTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR GCA 90 bp | GCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGATGTGTGAGAAGAGCTaGATAGCACACAATGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVQGRMEGQKVSRERAEEMCEKS*IAHNGK Trigger: CTTCCCATTGTGTGCTATGCAGCTCTTCTCACACAT...CTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGTCTTTCTCCACTACATaGATAACCCCTGTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAVQGRMEGQKVSRERAESFSTT*ITPVSP Trigger: TGGGGATACAGGGGTTATCCATGTAGTGGAGAAAGA...CTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGACACTGGCTCAGCCAGGGAATCCATTTCTTCCCTAAGGGTTCAGGGTACTTTACTTGGATCCTaGCACTGCTCTCGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERDTGSARESISSLRVQGTLLGS*HCSRVR Trigger: CCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGT...ACCCTGAACCCTTAGGGAAGAAATGGATTCCCTGGCTGAGCCAGTGTCTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
||
| CDS-3UTR TCA 90 bp | TTGAATGCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGGATTTTCCTCTCCACTaGGTTTCCCCCACACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LNADAQSFTPSSWCSRWLDFPLH*VSPTQS Trigger: GGATTGTGTGGGGGAAACTCAGTGGAGAGGAAAATC...CAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003550.11 ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAAGCTCTTTGCTGGCAATTAGGAATATCCGAGCTTGGATGTCTTTCCAGCTCTGATGAGTGGCGTTaGGCAGGCGGACACAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQALCWQLGISELGCLSSSDEWR*AGGHKE Trigger: CTCCTTGTGTCCGCCTGCTCAACGCCACTCATCAGA...GCTGGAAAGACATCCAAGCTCGGATATTCCTAATTGCCAGCAAAGAGCTTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGACACTGGCTCAGCCAGGGAATCCATTTCTTCCCTAAGGGTTCAGGGTGAAGTTGGTTCCTCCTaGAAGCTCATACAGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: ERDTGSARESISSLRVQGEVGSS*KLIQCT Trigger: CGTGCACTGTATGAGCTTGCAGGAGGAACCAACTTC...ACCCTGAACCCTTAGGGAAGAAATGGATTCCCTGGCTGAGCCAGTGTCTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CCA 90 bp | GGATACCCACTTAACAGCGTGCCCACACTAACATGCCATCTGCACACCTGGAGAGTCACAGACGATTTCTaGGTTGATGCTGAAGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GYPLNSVPTLTCHLHTWRVTDDF*VDAEGA Trigger: AGCACCTTCAGCATCAACCCAGAAATCGTCTGTGAC...TCTCCAGGTGTGCAGATGGCATGTTAGTGTGGGCACGCTGTTAAGTGGGTATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CCA 90 bp | GTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTATCCTTGCTCTCATTTaGGACTTTACTTGGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: VQGRMEGQKVSRERAEEGILALI*DFTWIL Trigger: CAGGATCCAAGTAAAGTCCCAAATGAGAGCAAGGAT...ACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CCA 90 bp | GAATGCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAAGCCTCTCTGTCCTGTTaGAATTCCAAGGGCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: ECRCTIFHTLFLVQQVAEASLSC*NSKGLV Trigger: TACAAGGCCCTTGGAATTCCAACAGGACAGAGAGGC...TTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| 3UTR CAA 72 bp | TGCACACTAGGAGAGAAGCTTGAAGTTGAGTTGGGCTaGGCTAGAGTCACGGCAAGACCAGCGATTCTACTG | + |
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Preference number: 4 (lower is better) Translates to: CTLGEKLEVELG*ARVTARPAILL Trigger: CAGTAGAATCGCTGGTCTTGCCGTGACTCTAGCCAAGCCCAACTCAACTTCAAGCTTCTCTCCTAGTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| CDS-3UTR GCA 90 bp | GAATGCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATCCACAGTGTTTTCTTaGAGTGAGCAAACTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: ECRCTIFHTLFLVQQVAESTVFS*SEQTLA Trigger: GGCCAGAGTTTGCTCACTGCAAGAAAACACTGTGGA...TTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CCA 90 bp | GAAAGAGACACTGGCTCAGCCAGGGAATCCATTTCTTCCCTAAGGGTTCAGGGTCTGGCCCGTAGGAGTTaGAGTAAATACCAAACCCAT | + |
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Preference number: 4 (lower is better) Translates to: ERDTGSARESISSLRVQGLARRS*SKYQTH Trigger: ATGGGTTTGGTATTTACTCCAACTCCTACGGGCCAG...ACCCTGAACCCTTAGGGAAGAAATGGATTCCCTGGCTGAGCCAGTGTCTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CCA 90 bp | AGTGGTTTGTTCCCAGCCGGACACCTGGTCTGGGAAGTAAAGTTCAGAGCAGGCACTCAAGCTCTTTGCTaGCAATTAGGAATATCCGAG | + |
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Preference number: 4 (lower is better) Translates to: SGLFPAGHLVWEVKFRAGTQALC*QLGISE Trigger: CTCGGATATTCCTAATTGCCAGCAAAGAGCTTGAGT...GCCTGCTCTGAACTTTACTTCCCAGACCAGGTGTCCGGCTGGGAACAAACCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR TCA 90 bp | TTGAATGCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGATCATAGACCATCCGTaGGCTGCCAATGTAGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LNADAQSFTPSSWCSRWLIIDHP*AANVVK Trigger: TTTGACTACATTGGCAGCTCACGGATGGTCTATGAT...CAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR TCA 90 bp | AGTGGTTTGTTCCCAGCCGGACACCTGGTCTGGGAAGTAAAGTTCAGAGCAGGCTGTTTCAAGATCGACTaGAACCATGAGTTGTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: SGLFPAGHLVWEVKFRAGCFKID*NHELLA Trigger: AGCTAACAACTCATGGTTTCAGTCGATCTTGAAACA...GCCTGCTCTGAACTTTACTTCCCAGACCAGGTGTCCGGCTGGGAACAAACCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CCA 90 bp | AGTGGTTTGTTCCCAGCCGGACACCTGGTCTGGGAAGTAAAGTTCAGAGCAGGCAGAAGATCCTCCACCTaGTTTTTCACAGACTCATTT | + |
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Preference number: 4 (lower is better) Translates to: SGLFPAGHLVWEVKFRAGRRSST*FFTDSF Trigger: AAATGAGTCTGTGAAAAACCAGGTGGAGGATCTTCT...GCCTGCTCTGAACTTTACTTCCCAGACCAGGTGTCCGGCTGGGAACAAACCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| 3UTR CAA 72 bp | CTGAAGCCCACGATCAGCGTGATGAACTCAAGCTCTTaGCTGGCAATTAGGAATATCCGAGCTTGGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LKPTISVMNSSS*LAIRNIRAWMS Trigger: AGACATCCAAGCTCGGATATTCCTAATTGCCAGCAAAGAGCTTGAGTTCATCACGCTGATCGTGGGCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| CDS-3UTR TCA 90 bp | GCAACCACAACCCTGACGTCAGGTTCTAGTCCCACAGATGTATTTATAGGCTTAGATTTTCCTCTCCACTaGGTTTCCCCCACACAATCC | + |
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Preference number: 4 (lower is better) Translates to: ATTTLTSGSSPTDVFIGLDFPLH*VSPTQS Trigger: GGATTGTGTGGGGGAAACTCAGTGGAGAGGAAAATC...TAAGCCTATAAATACATCTGTGGGACTAGAACCTGACGTCAGGGTTGTGGTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| CDS-3UTR GCA 90 bp | GCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGAGACCATCCGTGAGCTaGCAATGTAGTCAAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: ADAQSFTPSSWCSRWLNMRPSVS*QCSQKF Trigger: AAACTTTTGACTACATTGGCAGCTCACGGATGGTCT...CATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CCA 90 bp | GAAAGAGACACTGGCTCAGCCAGGGAATCCATTTCTTCCCTAAGGGTTCAGGGTCATTTTTCTGAGACATaGGATCTGTGTGCATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ERDTGSARESISSLRVQGHFSET*DLCASR Trigger: TCTGGATGCACACAGATCCCATGTCTCAGAAAAATG...ACCCTGAACCCTTAGGGAAGAAATGGATTCCCTGGCTGAGCCAGTGTCTCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| 3UTR CAA 72 bp | CAAGGGCCTTGTACCCACGAGTATTCATATAAATCCTaGCTCTCATTTGGGACTTTACTTGGATCCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: QGPCTHEYSYKS*LSFGTLLGSWH Trigger: GTGCCAGGATCCAAGTAAAGTCCCAAATGAGAGCAAGGATTTATATGAATACTCGTGGGTACAAGGCCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140643.8 ENSMUST00000146137.8 |
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| CDS-3UTR CAA 90 bp | CTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGACAGTGGAGTCTGCTCTCGGGTGAGGTaGGTCGCCTTGCCAGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LVQQVAEYGGGVSGDSGVCSRVR*VALPVR Trigger: CCTGACTGGCAAGGCGACCAACCTCACCCGAGAGCA...GACTCCACTGTCACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | ACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGGTCACATCAGGTGCCTaGTGCAAAGCTTCAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: TPSSWCSRWLNMGEGCRVVTSGA*CKASAA Trigger: TGCAGCTGAAGCTTTGCACAAGGCACCTGATGTGAC...CACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | ATGGGGGAGGGGTGTCGGGTGACAGTGGAGTCAGAGGGCAGTACAGGGCAGGATGTGTCTGTCACAAAGTaGAGGTCCTCTTCTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: MGEGCRVTVESEGSTGQDVSVTK*RSSSGL Trigger: GAGCCCAGAAGAGGACCTCAACTTTGTGACAGACAC...ATCCTGCCCTGTACTGCCCTCTGACTCCACTGTCACCCGACACCCCTCCCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | GCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGAGCCTCTCTGTCCTGTaGGAATTCCAAGGGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: AVQGRMEGQKVSRERAEESLSVL*EFQGPC Trigger: ACAAGGCCCTTGGAATTCCAACAGGACAGAGAGGCT...CTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | CAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGCAGCGATTCTACTGGTaGTTCCCTTCAGCTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: QSFTPSSWCSRWLNMGEGQRFYW*FPSASP Trigger: TGGAGAAGCTGAAGGGAACAACCAGTAGAATCGCTG...CCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | GTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGAGAGAAGCTTGAAGTaGAGTTGGGCTTGGCTAGAG | + |
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Preference number: 5 (lower is better) Translates to: VQGRMEGQKVSRERAEEGERSLK*SWAWLE Trigger: CTCTAGCCAAGCCCAACTCAACTTCAAGCTTCTCTC...ACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | CAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGCATTTGGGACTTTACTaGGATCCTGGCACTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: QSFTPSSWCSRWLNMGEGHLGLY*DPGTAL Trigger: GAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAATG...CCCCTCCCCCATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | CTGGTGCAGCAGGTGGCTGAATATGGGGGAGGGGTGTCGGGTGACAGTGGAGTCAATCCTTGCTCTCATTaGGGACTTTACTTGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: LVQQVAEYGGGVSGDSGVNPCSH*GLYLDP Trigger: AGGATCCAAGTAAAGTCCCAAATGAGAGCAAGGATT...GACTCCACTGTCACCCGACACCCCTCCCCCATATTCAGCCACCTGCTGCACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | GCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGTCTCTGGTGAAGAGCTaGCCCTCCAGCAGAACCATG | + |
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Preference number: 5 (lower is better) Translates to: ADAQSFTPSSWCSRWLNMSLVKS*PSSRTM Trigger: CATGGTTCTGCTGGAGGGCAAGCTCTTCACCAGAGA...CATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | GCAGGATGGAAGGACAGAAGGTATCCCGAGAAAGGGCAGAGGAGGGTGGGTAACACCCAGGTTGTGATCTaGATAGCACTGCTTGATGAC | + |
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Preference number: 5 (lower is better) Translates to: AGWKDRRYPEKGQRRVGNTQVVI*IALLDD Trigger: GTCATCAAGCAGTGCTATCAAGATCACAACCTGGGT...GTTACCCACCCTCCTCTGCCCTTTCTCGGGATACCTTCTGTCCTTCCATCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | GGATACCCACTTAACAGCGTGCCCACACTAACATGCCATCTGCACACCTGGAGAATGGAGCTGCTGAAGTaGGTTCCTCCTGCAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: GYPLNSVPTLTCHLHTWRMELLK*VPPASS Trigger: TGAGCTTGCAGGAGGAACCAACTTCAGCAGCTCCAT...TCTCCAGGTGTGCAGATGGCATGTTAGTGTGGGCACGCTGTTAAGTGGGTATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | GTGGAGTCAGAGGGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGAGGAATTCCAAGGGCCTaGTACCCACGAGTATTCATA | + |
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Preference number: 5 (lower is better) Translates to: VESEGSTGQDGRTEGIPRGIPRA*YPRVFI Trigger: TATGAATACTCGTGGGTACAAGGCCCTTGGAATTCC...TCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCCCTCTGACTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | GTGGAGTCAGAGGGCAGTACAGGGCAGGATGGAAGGACAGAAGGTATCCCGAGACACTGCTTGATGACCTaGGTTTCGTTCTCATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: VESEGSTGQDGRTEGIPRHCLMT*VSFSSS Trigger: TGAAGATGAGAACGAAACCAAGGTCATCAAGCAGTG...TCTCGGGATACCTTCTGTCCTTCCATCCTGCCCTGTACTGCCCTCTGACTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | GCAGATGCACAATCTTTCACACCCTCTTCCTGGTGCAGCAGGTGGCTGAATATGCAGACGATTTCTGGGTaGATGCTGAAGGTGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: ADAQSFTPSSWCSRWLNMQTISG*MLKVLW Trigger: CCAGAGCACCTTCAGCATCAACCCAGAAATCGTCTG...CATATTCAGCCACCTGCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS CCA 90 bp | CCATCGGTCAACACCCACTTCAGGTCTTCTTCTTTCTCCACTACATaGATAACCCCTGTATCCCCACTAATTGAAGACTGGCAGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: PSVNTHFRSSSFSTT*ITPVSPLIEDWQPI Trigger: GATTGGCTGCCAGTCTTCAATTAGTGGGGATACAGGGGTTATCCATGTAGTGGAGAAAGAAGAAGACCTGAAGTGGGTGTTGACCGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS-3UTR CAA 90 bp | GAAAGAGACACTGGCTCAGCCAGGGAATCCATTTCTTCCCTAAGGGTTCAGGGTATGAACTCAAGCTCTTaGCTGGCAATTAGGAATATC | + |
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Preference number: 5 (lower is better) Translates to: ERDTGSARESISSLRVQGMNSSS*LAIRNI Trigger: GATATTCCTAATTGCCAGCAAAGAGCTTGAGTTCAT...ACCCTGAACCCTTAGGGAAGAAATGGATTCCCTGGCTGAGCCAGTGTCTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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| CDS CCA 72 bp | AACACCCACTTCAGGTCTTCTTCTTTCTCCACTACATaGATAACCCCTGTATCCCCACTAATTGAAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: NTHFRSSSFSTT*ITPVSPLIEDW Trigger: CCAGTCTTCAATTAGTGGGGATACAGGGGTTATCCATGTAGTGGAGAAAGAAGAAGACCTGAAGTGGGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003550.11 |
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